# terms

id: PBO:0031116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mutator","termid":"PBO:0031116"}


id: PR:Q10358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RER1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02094","PRO:DNx","PANTHER:PTHR10743:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rer1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.05c","secondary_identifiers":["UniProtKB:Q10358"],"synonyms":[{"name":"Spom972h-RER1","type":"exact"},{"name":"retention of ER proteins 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10358"}


id: PBO:0005700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak3","termid":"PBO:0005700"}


id: PBO:0056446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 19","termid":"PBO:0056446"}


id: MONDO:0004558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma composed of large size follicles.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland macrofollicular adenoma","secondary_identifiers":["DOID:8419","MEDGEN:90763","UMLS:C0334329","ICDO:8334/0","NCIT:C4161"],"synonyms":[{"name":"colloid adenoma","type":"related"},{"name":"macrofollicular adenoma","type":"exact"},{"name":"macrofollicular adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004558","xrefs":{"Monarch":{"xref_id":"0004558"}}}


id: MONDO:0011174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperzincemia with functional zinc depletion","secondary_identifiers":["MESH:C566595","OMIM:601979","MEDGEN:356415","UMLS:C1865986"],"synonyms":[{"name":"hyperzincemia with functional zinc depletion","type":"exact"}],"termid":"MONDO:0011174","xrefs":{"Monarch":{"xref_id":"0011174"}}}


id: MONDO:0011005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 18-like syndrome","secondary_identifiers":["MEDGEN:331340","UMLS:C1832677","MESH:C563382","OMIM:601161"],"synonyms":[{"name":"trisomy 18-like syndrome","type":"exact"}],"termid":"MONDO:0011005","xrefs":{"Monarch":{"xref_id":"0011005"}}}


id: PBO:0065554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 3","termid":"PBO:0065554"}


id: MONDO:0957443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive ataxia due to PEX2 deficiency","secondary_identifiers":["Orphanet:642965","UMLS:C5816796","MEDGEN:1843414"],"termid":"MONDO:0957443","xrefs":{"Monarch":{"xref_id":"0957443"}}}


id: MONDO:0004639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fulminating disease of neonates in which there is extensive mucosal ulceration, pseudomembrane formation, submucosal hemorrhage, and necrosis usually of the right colon, cecum, terminal ileum, and appendix, possibly due to perinatal intestinal ischemia and bacterial invasion. Progression can lead to necrosis, perforation and/or scarring of the intestinal tract.","definition_xrefs":["NCIT:C84915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necrotizing enterocolitis","termid":"MONDO:0005313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"perinatal necrotizing enterocolitis","secondary_identifiers":["SCTID:397729009","UMLS:C4082937","DOID:8677","MEDGEN:906305"],"synonyms":[{"name":"enterocolitis necrotizing","type":"broad"},{"name":"enterocolitis, necrotizing","type":"related"},{"name":"necrotizing enterocolitis","type":"broad"},{"name":"necrotizing enterocolitis in fetus or newborn","type":"exact"},{"name":"necrotizing enterocolitis in foetus or newborn","type":"exact"},{"name":"perinatal necrotising enterocolitis","type":"exact"},{"name":"pseudomembranous enterocolitis in newborn","type":"exact"}],"termid":"MONDO:0004639","xrefs":{"Monarch":{"xref_id":"0004639"}}}


id: FYPO:0003191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to microtubules does not occur, and the protein is instead visible in one or a few foci or dots in the cytoplasm, during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:18799626","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitotic interphase, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"abolished protein localisation to microtubule during mitotic interphase, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"protein localization to microtubule abolished during interphase, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"},{"name":"protein localization to microtubule abolished during mitotic interphase, with protein mislocalized to cytoplasmic foci","type":"exact"}],"termid":"FYPO:0003191"}


id: GO:0031730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR5 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CCR5 chemokine receptor binding","synonyms":[{"name":"CCR5 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031730"}


id: GO:0019594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"mannitol metabolic process","synonyms":[{"name":"mannitol metabolism","type":"exact"}],"termid":"GO:0019594"}


id: PBO:0075753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit beta","termid":"PBO:0075753"}


id: GO:0034352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of glial cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell apoptotic process","termid":"GO:0034350"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell apoptotic process","synonyms":[{"name":"activation of glial cell apoptosis","type":"narrow"},{"name":"positive regulation of glial cell apoptosis","type":"narrow"},{"name":"stimulation of glial cell apoptosis","type":"narrow"},{"name":"up regulation of glial cell apoptosis","type":"exact"},{"name":"up-regulation of glial cell apoptosis","type":"exact"},{"name":"upregulation of glial cell apoptosis","type":"exact"}],"termid":"GO:0034352"}


id: GO:0046228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound widely used as a herbicide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4,5-trichlorophenoxyacetic acid metabolic process","termid":"GO:0018980"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2,4,5-trichlorophenoxyacetic acid catabolic process","synonyms":[{"name":"2,4,5-trichlorophenoxyacetic acid breakdown","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid catabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid degradation","type":"exact"}],"termid":"GO:0046228"}


id: PR:Q9P7B7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr1 gene.","definition_xrefs":["UniProtKB:Q9P7B7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C140.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.04","synonyms":[{"name":"Spom972h-ctr1","type":"exact"}],"termid":"PR:Q9P7B7"}


id: PBO:0077532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 245","termid":"PBO:0077532"}


id: PBO:0080437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS53 subunit of GARP complex","termid":"PBO:0080437"}


id: PBO:0089213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP 3'tRNA nucleotidyltransferase Cca2","termid":"PBO:0089213"}


id: PBO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl5 (predicted)","termid":"PBO:0002622"}


id: PBO:0050620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 12","termid":"PBO:0050620"}


id: SO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_J_cluster","synonyms":[{"name":"V VJ J cluster","type":"exact"},{"name":"V-(VJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000525"}


id: MONDO:0009438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal hypouricemia","termid":"MONDO:0009071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypouricemia, hypercalcinuria, and decreased bone density","secondary_identifiers":["MEDGEN:343419","MESH:C565475","OMIM:242050","GARD:15186","UMLS:C1855793"],"synonyms":[{"name":"hypouricemia, hypercalcinuria, and decreased bone density","type":"exact"}],"termid":"MONDO:0009438","xrefs":{"Monarch":{"xref_id":"0009438"}}}


id: GO:1901892
data:
  {"annotated_genes":["SJAG_02169","SJAG_03353","SJAG_06270","SJAG_04455","SJAG_03048","SJAG_04943","SJAG_02514","SJAG_00883","SJAG_03508","SJAG_03681","SJAG_01790","SJAG_01464","SJAG_03592","SJAG_00229","SJAG_01386","SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[101063,107034,92600,93218,90481,104837,107341,92684,72471,106897,91489,99378,115712,95400,109967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell septum assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of cell septum assembly","termid":"GO:1901891"},{"relation_name":"negatively_regulates","term_name":"cell septum assembly","termid":"GO:0090529"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"negative regulation of cell septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell septum assembly","type":"exact"},{"name":"down-regulation of cell septum assembly","type":"exact"},{"name":"downregulation of cell septum assembly","type":"exact"},{"name":"inhibition of cell septum assembly","type":"narrow"}],"termid":"GO:1901892","terms_by_termid":{"GO:0031030":null,"GO:1905757":null}}


id: MONDO:0016204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic copper-associated cirrhosis is a rare copper-overload liver disease characterized by a rapidly progressive liver cirrhosis from the first few years of life leading to hepatic insufficiency and harboring a specific pathological aspect: pericellular fibrosis, inflammatory infiltration, hepatocyte necrosis, absence of steatosis, poor regeneration and histochemical copper staining.","definition_xrefs":["Orphanet:209919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"idiopathic copper-associated cirrhosis","secondary_identifiers":["UMLS:C4274853","GARD:17106","SCTID:715864007","icd11.foundation:1692504835","MEDGEN:907284"],"synonyms":[{"name":"non-Wilsonian hepatic copper toxicosis of infancy and childhood","type":"exact"}],"termid":"MONDO:0016204","xrefs":{"Monarch":{"xref_id":"0016204"}}}


id: PBO:0090003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific serine/threonine rich protein","termid":"PBO:0090003"}


id: PBO:0047707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMNL1 divergent transcript","termid":"PBO:0047707"}


id: GO:0140909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of doubling of the number of maxicircles and minicircles and distribution of the progeny into two daughter networks, which are identical to the parent kinetoplast DNA network.","definition_xrefs":["PMID:8045928","GOC:ach","PMID:8561456","PMID:12455998","PMID:15967722","PMID:17462016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007005","GO:0006259"],"is_obsolete":false,"name":"kinetoplast DNA replication","synonyms":[{"name":"kDNA replication","type":"exact"},{"name":"kinetoplast DNA synthesis","type":"exact"},{"name":"replication of kinetoplast DNA","type":"exact"}],"termid":"GO:0140909"}


id: PBO:0054517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1917","termid":"PBO:0054517"}


id: PBO:0001226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arv1-like family protein Arv1 (predicted)","termid":"PBO:0001226"}


id: GO:0005694
data:
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id: GO:0046969
data:
  {"annotated_genes":["SJAG_01075","SJAG_04186","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57956,89807,103985],"is_not":false,"summary":null,"term":"GO:0046969"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + NAD+ + H2O = histone H3 L-lysine (position 9) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K9 to NAD, producing nicotinamide.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0033558","GO:0016740","GO:0003674","GO:0019213","GO:0140096","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"histone H3K9 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9604829"],"synonyms":[{"name":"NAD-dependent H3-K9 histone deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K9 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0046969","terms_by_termid":{"GO:0046969":null}}


id: FYPO:0001194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased beta-glucan level","synonyms":[{"name":"increased beta-D-glucan level","type":"exact"},{"name":"increased beta-glucan accumulation","type":"related"},{"name":"increased beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased beta-glucan level during vegetative growth","type":"exact"},{"name":"increased cellular beta-glucan level","type":"exact"}],"termid":"FYPO:0001194"}


id: FYPO:0000907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion inheritance is abolished, resulting in the formation of a daughter cell that lacks mitochondria.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance during vegetative growth","termid":"FYPO:0000906"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitochondrion inheritance during vegetative growth","synonyms":[{"name":"abolished mitochondrion inheritance during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial inheritance during vegetative growth","type":"related"},{"name":"mitochondrion inheritance abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000907"}


id: PBO:0018165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase, tRNA N6-threonyl-carbamoyl-adenosine (t6A), a modification protein Pgp1","termid":"PBO:0018165"}


id: GO:0048837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sorocarp sorus over time, from its formation to the mature structure. A sorocarp sorus is the spore containing structure of a sorocarp.","definition_xrefs":["GOC:mtg_sensu","GOC:devbiol","PMID:4332228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"culmination involved in sorocarp development","termid":"GO:0031154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp sorus development","synonyms":[{"name":"sorocarp sorus formation","type":"exact"},{"name":"sorocarp spore head formation","type":"exact"},{"name":"sorocarp spore head morphogenesis","type":"related"}],"termid":"GO:0048837"}


id: GO:0090492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalyzes the reaction: N,N-Dihydroxy-L-tryptophan = Indole-3-acetaldehyde oxime + CO2 + H2O.","definition_xrefs":["KEGG_REACTION:R09585"],"gene_count":0,"genotype_count":0,"name":"obsolete N,N-Dihydroxy-L-tryptophan decarboxylase activity (obsolete GO:0090492)","termid":"GO:0090492"}


id: MONDO:0009172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the small intestine and colon. Causes include viruses, bacteria, radiation, and antibiotics use.","definition_xrefs":["NCIT:C79573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterocolitis","secondary_identifiers":["MESH:D004760","SCTID:43752006","EFO:1001481","ICD9:558.9","HP:0004387","UMLS:C0014356","OMIM:226150","MEDGEN:4966"],"synonyms":[{"name":"enterocolitis","type":"exact"},{"name":"enterocolitis (disease)","type":"exact"}],"termid":"MONDO:0009172","xrefs":{"Monarch":{"xref_id":"0009172"}}}


id: PBO:0089100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssz1","termid":"PBO:0089100"}


id: PBO:0076720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohyalin","termid":"PBO:0076720"}


id: PBO:0005375
data:
  {"annotated_genes":["SJAG_MIT13","SJAG_MIT20","SJAG_MIT04"],"annotation_feature_type":"gene","cv_annotations":{"EC numbers":[{"annotations":[56022,56033,56042],"is_not":false,"summary":null,"term":"PBO:0005375"}]},"cv_name":"EC numbers","gene_count":3,"genes_by_uniquename":{"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"is_obsolete":false,"name":"1.9.3.1","termid":"PBO:0005375","terms_by_termid":{"PBO:0005375":null}}


id: PR:Q92361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- xrc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G9.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.16c","synonyms":[{"name":"Spom972h-xrc4","type":"exact"}],"termid":"PR:Q92361"}


id: GO:1900739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway (obsolete GO:1900739)","synonyms":[{"name":"regulation of insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"regulation of protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"regulation of protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"regulation of protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"}],"termid":"GO:1900739"}


id: GO:1903721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of I-kappaB phosphorylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23675531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of I-kappaB phosphorylation","termid":"GO:1903719"},{"relation_name":"positively_regulates","term_name":"I-kappaB phosphorylation","termid":"GO:0007252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of I-kappaB phosphorylation","synonyms":[{"name":"activation of I-kappaB phosphorylation","type":"narrow"},{"name":"activation of IKB phosphorylation","type":"narrow"},{"name":"activation of IkappaB phosphorylation","type":"narrow"},{"name":"activation of inhibitor of NF-kappaB phosphorylation","type":"narrow"},{"name":"activation of inhibitor of kappaB phosphorylation","type":"narrow"},{"name":"positive regulation of IKB phosphorylation","type":"exact"},{"name":"positive regulation of IkappaB phosphorylation","type":"exact"},{"name":"positive regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"positive regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"up regulation of I-kappaB phosphorylation","type":"exact"},{"name":"up regulation of IKB phosphorylation","type":"exact"},{"name":"up regulation of IkappaB phosphorylation","type":"exact"},{"name":"up regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"up regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"up-regulation of I-kappaB phosphorylation","type":"exact"},{"name":"up-regulation of IKB phosphorylation","type":"exact"},{"name":"up-regulation of IkappaB phosphorylation","type":"exact"},{"name":"up-regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"up-regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"upregulation of I-kappaB phosphorylation","type":"exact"},{"name":"upregulation of IKB phosphorylation","type":"exact"},{"name":"upregulation of IkappaB phosphorylation","type":"exact"},{"name":"upregulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"upregulation of inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:1903721"}


id: PBO:0089850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Srm160","termid":"PBO:0089850"}


id: PBO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_formation","termid":"PBO:0031236"}


id: FYPO:0000446
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"mitotic G2 phase arrest","type":"related"},{"name":"mitotic G2/M phase transition arrest","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic cell cycle progression at mitotic G2/M phase transition: arrested","type":"related"}],"termid":"FYPO:0000446","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0120012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of sphingolipids between membranes in which a sphingolipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["PMID:20823909","GOC:krc","PMID:24220498","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"intermembrane sphingolipid transfer","termid":"GO:0120012"}


id: PBO:0060574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 10","termid":"PBO:0060574"}


id: MONDO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma (disease) that involves the bone tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"chondrosarcoma","termid":"MONDO:0008977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone chondrosarcoma","secondary_identifiers":["UMLS:C3163843","MEDGEN:756255","DOID:0050897"],"synonyms":[{"name":"bone tissue chondrosarcoma (disease)","type":"exact"},{"name":"chondrosarcoma (disease) of bone tissue","type":"exact"}],"termid":"MONDO:0000515","xrefs":{"Monarch":{"xref_id":"0000515"}}}


id: FYPO:0003906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on bleomycin","synonyms":[{"name":"normal cell population growth in presence of bleomycin","type":"exact"},{"name":"normal cell population growth on bleomycin","type":"exact"},{"name":"normal cellular response to bleomycin","type":"related"},{"name":"normal vegetative cell population growth on bleomycin","type":"exact"}],"termid":"FYPO:0003906"}


id: PBO:0074511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A3","termid":"PBO:0074511"}


id: GO:0048682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in sprouting of an injured axon.","definition_xrefs":["GOC:lm","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sprouting of injured axon","termid":"GO:0048682"}


id: MONDO:0018212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of cervical artery dissection that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"cervical artery dissection","termid":"MONDO:0006061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial cervical artery dissection","secondary_identifiers":["Orphanet:36382","MEDGEN:1659372","GARD:18823","UMLS:C4755308"],"synonyms":[{"name":"familial CAD","type":"exact"},{"name":"hereditary CAD","type":"exact"},{"name":"hereditary cervical artery dissection","type":"exact"}],"termid":"MONDO:0018212","xrefs":{"Monarch":{"xref_id":"0018212"}}}


id: FYPO:0007746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle elongates during metaphase of the first meiotic nuclear division, when elongation is normally paused.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"normal spindle elongation during meiotic metaphase I","synonyms":[{"name":"normal spindle elongation during meiotic metaphase I spindle phase II","type":"exact"},{"name":"normal spindle elongation during metaphase I","type":"exact"},{"name":"normal spindle elongation during metaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007746"}


id: PBO:0084649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor CTP synthase isozyme (see also URA7); catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to UTP, forming CTP, the final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis; capable of forming cytoplasmic filaments termed cytoophidium, especially during conditions of glucose depletion; URA8 has a paralog, URA7, that arose from the whole genome duplication","termid":"PBO:0084649"}


id: MONDO:0000901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma characterized by less than 50 percent decrease in lesion size with induction therapy or the appearance of new lesions or the appearance of new lesions after attainment of complete remission.","definition_xrefs":["PMID:22160081","DOID:0080192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"relapsed/refractory diffuse large B-cell lymphoma","secondary_identifiers":["UMLS:C0855112","MEDGEN:208957"],"termid":"MONDO:0000901","xrefs":{"Monarch":{"xref_id":"0000901"}}}


id: GO:0102435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin + S-adenosyl-L-methionine = 7-O-methylmyricetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"myricetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13910"],"termid":"GO:0102435"}


id: MOD:01021
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiocresyl","termid":"MOD:01021"}


id: PBO:0054385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1781","termid":"PBO:0054385"}


id: GO:0006233
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70517],"is_not":false,"summary":null,"term":"GO:0006233"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dTDP, deoxyribosylthymine diphosphate (2'-deoxyribosylthymine5'-diphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009197"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dTDP metabolic process","termid":"GO:0046072"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dTDP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dTDP anabolism","type":"exact"},{"name":"dTDP biosynthesis","type":"exact"},{"name":"dTDP formation","type":"exact"},{"name":"dTDP synthesis","type":"exact"}],"termid":"GO:0006233","terms_by_termid":{"GO:0006233":null}}


id: GO:0046790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a virion, either by binding to components of the capsid or the viral envelope.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"virion binding","termid":"GO:0046790"}


id: FYECO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which histidine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ his","synonyms":[{"name":"histidine added","type":"exact"}],"termid":"FYECO:0000224"}


id: PBO:0033750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033750"}


id: PBO:0070924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 32","termid":"PBO:0070924"}


id: PBO:0112864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombephosphoproteomics_unige_ch_starvation_mating_gene","termid":"PBO:0112864"}


id: MONDO:0011518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wiedemann-Steiner syndrome is a rare genetic condition characterized by distinctive facial features, hairy elbows, short stature, and intellectual disability. This condition is caused by changes (mutations) in the KMT2A gene (also known as the MLL gene). It is inherited in an autosomal dominant manner. Most cases result from new (de novo) mutations that occur only in an egg or sperm cell, or just after conception. Treatment is symptomatic and supportive and may include special education classes and speech and occupational therapies aimed at increasing motor functioning and language.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiedemann-Steiner syndrome","secondary_identifiers":["MESH:C536704","NORD:150898","OMIM:605130","Orphanet:319182","UMLS:C1854630","GARD:5565","MEDGEN:340266"],"synonyms":[{"name":"A syndrome of abnormal facies, short stature, and psychomotor retardation","type":"related"},{"name":"WDSTS","type":"related"},{"name":"Wiedemann Grosse Dibbern syndrome","type":"related"},{"name":"Wiedemann-Steiner syndrome","type":"exact"},{"name":"hairy elbows, short stature, Facial Dysmorphism, and developmental delay","type":"related"},{"name":"hypertrichosis-short stature-facial dysmorphism-developmental delay syndrome","type":"exact"}],"termid":"MONDO:0011518","xrefs":{"Monarch":{"xref_id":"0011518"}}}


id: PBO:0027801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_JM335","termid":"PBO:0027801"}


id: GO:0110037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nematode male tail tip morphogenesis, the process in which the anatomical structure of the adult male tail tip is generated and organized.","definition_xrefs":["GOC:rz","PMID:28068334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"nematode male tail tip morphogenesis","termid":"GO:0045138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode male tail tip morphogenesis","termid":"GO:0110037"}


id: MOD:00515
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc(2)","definition_xrefs":["Unimod:147","PubMed:111247","PubMed:5490222","RESID:AA0151#var","PubMed:1694179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc2dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)dHex(1)","type":"related"},{"name":"HexNAc2dHex1","type":"related"}],"termid":"MOD:00515"}


id: PBO:0003657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK family kinase","termid":"PBO:0003657"}


id: SO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron which is spliced by the spliceosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal_intron","synonyms":[{"name":"spliceosomal intron","type":"exact"}],"termid":"SO:0000662"}


id: GO:0015720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of allantoin, (2,5-dioxo-4-imidazolidinyl)urea, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"allantoin transport","synonyms":[{"name":"allantoin transmembrane transport","type":"exact"},{"name":"allantoin/allantoate transport","type":"broad"}],"termid":"GO:0015720"}


id: GO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventricular septum intermedium over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septum development","termid":"GO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum intermedium development","termid":"GO:0003282"}


id: GO:0098809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + acceptor = product(s) of nitrate reduction + reduced acceptor.","definition_xrefs":["GOC:dos","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitrite reductase activity","termid":"GO:0098809"}


id: PBO:0064322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 4","termid":"PBO:0064322"}


id: MONDO:0016073
data:
  {"annotated_genes":["SJAG_04631","SJAG_03199","SJAG_00995","SJAG_04008","SJAG_04938","SJAG_03603","SJAG_02828","SJAG_04114","SJAG_02031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008955"},{"annotations":[85439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012553"},{"annotations":[84767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014696"},{"annotations":[85440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012554"},{"annotations":[85714,85713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"},{"annotations":[85712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[85395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014296"},{"annotations":[85010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010485"},{"annotations":[86343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010216"}]},"cv_name":"mondo","definition":"A microphthalmia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"microphthalmia","termid":"MONDO:0021129"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_02031":null,"SJAG_02828":null,"SJAG_03199":null,"SJAG_03603":null,"SJAG_04008":null,"SJAG_04114":null,"SJAG_04631":null,"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"syndromic microphthalmia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5679782","Orphanet:202948","OMIMPS:309800","MEDGEN:1826052","DOID:0080636","GARD:20342"],"synonyms":[{"name":"microphthalmia, syndromic","type":"exact"},{"name":"syndrome associated with microphthalmia","type":"exact"},{"name":"syndromic microphthalmia","type":"exact"}],"termid":"MONDO:0016073","terms_by_termid":{"MONDO:0008955":null,"MONDO:0010216":null,"MONDO:0010485":null,"MONDO:0010671":null,"MONDO:0012553":null,"MONDO:0012554":null,"MONDO:0014296":null,"MONDO:0014696":null,"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0016073"}}}


id: GO:0097035
data:
  {"annotated_genes":["SJAG_05209","SJAG_00669","SJAG_00870","SJAG_00230","SJAG_00589","SJAG_00018","SJAG_04734","SJAG_03209","SJAG_03774","SJAG_00576","SJAG_01095","SJAG_06440","SJAG_02581","SJAG_02897","SJAG_01731","SJAG_03050","SJAG_01945","SJAG_02943","SJAG_00587","SJAG_01470","SJAG_02132","SJAG_02957","SJAG_00261","SJAG_02114","SJAG_02516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[76667,94182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[62403,74202,90278,90272,101073,74383,109313,90270,72577,90271,90277,90273,59704,90276,90275,71650,72606,99261,102005,90274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[72858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[71672,100988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097036"}]},"cv_name":"biological_process","definition":"Any process that modulates the proportions or spatial arrangement of lipids in a cellular membrane.","definition_xrefs":["GOC:mah","PMID:18441123","PMID:20823909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00261":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_00870":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03209":null,"SJAG_03774":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of membrane lipid distribution","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0097035","terms_by_termid":{"GO:0017121":null,"GO:0034203":null,"GO:0045332":null,"GO:0097036":null,"GO:0140331":null}}


id: PBO:0058846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8075","termid":"PBO:0058846"}


id: FYPO:0007750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of a protein to the spindle is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle","termid":"FYPO:0007866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle during meiosis I","synonyms":[{"name":"normal protein localisation to spindle during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle","type":"exact"},{"name":"normal protein localization to spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007750"}


id: GO:0102381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: stevioside + UDP-alpha-D-glucose = H+ + rebaudioside A + UDP.","definition_xrefs":["RHEA:61756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"stevioside glucosyltransferase activity (rebaudioside A forming)","secondary_identifiers":["MetaCyc:RXN-13517"],"termid":"GO:0102381"}


id: MONDO:0012803
data:
  {"annotated_genes":["SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85932],"is_not":false,"summary":null,"term":"MONDO:0012803"}]},"cv_name":"mondo","definition":"This syndrome is characterized by diarrhea and vomiting after ingestion of trehalose, a disaccharide found mainly in mushrooms.","definition_xrefs":["Orphanet:103909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"diarrhea-vomiting due to trehalase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10372","MESH:C562603","MEDGEN:75660","ICD9:271.8","SCTID:84193000","UMLS:C0268187","OMIM:612119","icd11.foundation:2025219157"],"synonyms":[{"name":"isolated trehalose intolerance","type":"exact"},{"name":"trehalase deficiency","type":"related"},{"name":"trehalose intolerance","type":"related"}],"termid":"MONDO:0012803","terms_by_termid":{"MONDO:0012803":null},"xrefs":{"Monarch":{"xref_id":"0012803"}}}


id: PBO:0072693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 3","termid":"PBO:0072693"}


id: GO:2000788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"negative regulation of blood vessel endothelial cell differentiation","termid":"GO:0110059"},{"relation_name":"is_a","term_name":"regulation of venous endothelial cell fate commitment","termid":"GO:2000787"},{"relation_name":"negatively_regulates","term_name":"venous endothelial cell fate commitment","termid":"GO:0060845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of venous endothelial cell fate commitment","termid":"GO:2000788"}


id: MONDO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"pustulosis palmaris et plantaris","secondary_identifiers":["GARD:12820","NCIT:C34888","ICD10CM:L40.3","NORD:2008","MedDRA:10050185","SCTID:81271001","Orphanet:163927","SCTID:27520001","UMLS:C0030246","ICD9:696.1","MEDGEN:45290","MESH:D011565","DOID:4398","icd11.foundation:877172115"],"synonyms":[{"name":"LPP","type":"exact"},{"name":"PPP","type":"exact"},{"name":"Palmoplantar Pustulosis","type":"exact"},{"name":"acropustulosis","type":"exact"},{"name":"localised pustular psoriasis","type":"exact"},{"name":"localized pustular psoriasis","type":"exact"},{"name":"palmoplantar pustulosis","type":"exact"},{"name":"pustular psoriasis of the palms and/or soles","type":"exact"},{"name":"pustulosis of palm and sole","type":"exact"}],"termid":"MONDO:0015597","xrefs":{"Monarch":{"xref_id":"0015597"}}}


id: PBO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe CAspase 1","termid":"PBO:0005813"}


id: MONDO:0030375
data:
  {"annotated_genes":["SJAG_00243"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86084],"is_not":false,"summary":null,"term":"MONDO:0030375"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset","termid":"MONDO:0024189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00243":null},"genotype_count":0,"is_obsolete":false,"name":"neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619418","UMLS:C5543623","MEDGEN:1778117"],"synonyms":[{"name":"IMNEPD2","type":"exact"}],"termid":"MONDO:0030375","terms_by_termid":{"MONDO:0030375":null},"xrefs":{"Monarch":{"xref_id":"0030375"}}}


id: PBO:0081943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ribbon domain containing 2","termid":"PBO:0081943"}


id: MONDO:0013176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Weill-Marchesani syndrome","termid":"MONDO:0018096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weill-Marchesani 4 syndrome, recessive","secondary_identifiers":["Orphanet:363992","GARD:17579","UMLS:C2750787","MESH:C567710","MEDGEN:416383","OMIM:613195"],"synonyms":[{"name":"15q26.3 microdeletion syndrome","type":"exact"},{"name":"WMS4","type":"exact"},{"name":"Weill-Marchesani syndrome 4","type":"exact"},{"name":"Weill-Marchesani-like syndrome","type":"exact"},{"name":"ichthyosis-short stature-brachydactyly-microspherophakia syndrome","type":"exact"}],"termid":"MONDO:0013176","xrefs":{"Monarch":{"xref_id":"0013176"}}}


id: MOD:01900
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-cysteine 5-methyloxazole-4-carboxylic acid.","definition_xrefs":["PubMed:21568297","PubMed:21950656","RESID:AA0571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine 5-methyloxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1R)-1-amino-2-sulfanylethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1R)-1-azanyl-2-sulfanylethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methyloxazole-4-carboxylic acid (Cys-Thr)","type":"exact"},{"name":"L-cysteine 5-methyloxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01900"}


id: PBO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc5","termid":"PBO:0002038"}


id: GO:0103028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a peptidoglycan dimer (generic) = a lipid II + GlcNAc-1,6-anhydro-MurNAc-pentapeptide.","definition_xrefs":["GOC:pz","EC:4.2.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"murein hydrolase activity","secondary_identifiers":["MetaCyc:RXN0-5190"],"termid":"GO:0103028"}


id: MOD:01099
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to succinyl beta-aspartyl anhydride.","definition_xrefs":["DeltaMass:244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"succinylated residue","termid":"MOD:01029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl beta-aspartyl anhydride","synonyms":[{"name":"succinyl aspartamyl","type":"exact"}],"termid":"MOD:01099"}


id: GO:2000357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell differentiation","termid":"GO:0051151"},{"relation_name":"is_a","term_name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"},{"relation_name":"negatively_regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kidney smooth muscle cell differentiation","termid":"GO:2000357"}


id: PBO:0111871
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OB fold","termid":"PBO:0111871"}


id: GO:0099587
data:
  {"annotated_genes":["SJAG_04668","SJAG_04830","SJAG_03631","SJAG_04551","SJAG_02463","SJAG_05229","SJAG_01493","SJAG_02883","SJAG_00296","SJAG_04246","SJAG_02968","SJAG_04185","SJAG_01353","SJAG_01090","SJAG_02877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66567,74120,92158,114242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[87686,114395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[90973,113165],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[79719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[101934],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[72020,70222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[109918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[103963,113018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of inorganic ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion transmembrane transport","termid":"GO:0098660"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_01353":null,"SJAG_01493":null,"SJAG_02463":null,"SJAG_02877":null,"SJAG_02883":null,"SJAG_02968":null,"SJAG_03631":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04830":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"inorganic ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"inorganic ion import into cell","type":"exact"}],"termid":"GO:0099587","terms_by_termid":{"GO:0071578":null,"GO:0098703":null,"GO:0098705":null,"GO:0098716":null,"GO:1902434":null,"GO:1905665":null,"GO:1905949":null,"GO:1990573":null}}


id: PBO:0068280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 1","termid":"PBO:0068280"}


id: PBO:0069456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 721, pseudogene","termid":"PBO:0069456"}


id: PBO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex large subunit (predicted)","termid":"PBO:0001944"}


id: PBO:0031583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_leucine","termid":"PBO:0031583"}


id: GO:0031902
data:
  {"annotated_genes":["SJAG_04023","SJAG_03347","SJAG_04349","SJAG_02429","SJAG_04024","SJAG_05210","SJAG_02100","SJAG_03892","SJAG_04513","SJAG_01981"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75719,78184,87866,91758,97435,99296,100865],"is_not":false,"summary":null,"term":"GO:0031902"},{"annotations":[60185,62151,118930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a late endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_03347":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04513":null,"SJAG_05210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"late endosome membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"termid":"GO:0031902","terms_by_termid":{"GO:0031902":null,"GO:0032585":null}}


id: SO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has an aspartic acid anticodon, and a 3' aspartic acid binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"aspartic_acid_tRNA_primary_transcript","termid":"SO:0000214"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl_tRNA","synonyms":[{"name":"aspartyl tRNA","type":"exact"},{"name":"aspartyl-transfer RNA","type":"exact"},{"name":"aspartyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000257"}


id: GO:0030916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the transition of the otic placode into the otic vesicle, a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle formation","synonyms":[{"name":"otocyst biosynthesis","type":"exact"},{"name":"otocyst formation","type":"exact"}],"termid":"GO:0030916"}


id: FYPO:0004256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell is viable, and grows in the form of a lemon. A lemon shape is defined mathematically as having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"viable lemon-shaped cell","synonyms":[{"name":"viable lemon-shaped cell during mitotic cell cycle","type":"related"},{"name":"viable lemon-shaped cell during vegetative growth","type":"exact"},{"name":"viable lemon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0004256"}


id: MONDO:0016504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary unilateral adrenal hyperplasia (PUAH) is a surgically-correctable form of primary (hyper) aldosteronism (PA) characterized by renin suppression, unilateral aldosterone hypersecretion, and moderate to severe hypertension secondary to hyperplasia of the adrenal gland.","definition_xrefs":["Orphanet:231580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary aldosteronism","termid":"MONDO:0001422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary unilateral adrenal hyperplasia","secondary_identifiers":["UMLS:C4274967","icd11.foundation:1653668765","GARD:20620","MEDGEN:905007","SCTID:715868005"],"synonyms":[{"name":"PUAH","type":"exact"}],"termid":"MONDO:0016504","xrefs":{"Monarch":{"xref_id":"0016504"}}}


id: MONDO:0019066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Brachydactyly ('short digits') is a general term that refers to disproportionately short fingers and toes, and forms part of the group of limb malformations characterized by bone dysostosis.","definition_xrefs":["Orphanet:69028"],"gene_count":0,"genotype_count":0,"name":"obsolete syndrome with brachydactyly (obsolete MONDO:0019066)","synonyms":[{"name":"dysostosis with brachydactyly","type":"related"}],"termid":"MONDO:0019066","xrefs":{"Monarch":{"xref_id":"0019066"}}}


id: PBO:0070808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 38","termid":"PBO:0070808"}


id: PR:P05767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl39 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L39 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.04","synonyms":[{"name":"Spom972h-rpl39","type":"exact"},{"name":"YL36 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05767"}


id: PBO:0061080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK1 homeobox 2","termid":"PBO:0061080"}


id: PBO:0089224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, Atf-CREB family Atf21","termid":"PBO:0089224"}


id: PBO:0065392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 1","termid":"PBO:0065392"}


id: PBO:0027308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_UV-damage_excision_repair","termid":"PBO:0027308"}


id: PBO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 34 (pseudogene)","termid":"PBO:0045622"}


id: GO:0009186
data:
  {"annotated_genes":["SJAG_02874","SJAG_04665","SJAG_04657","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95247,107058,92196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009186","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: PBO:0075838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSTR5 antisense RNA 1","termid":"PBO:0075838"}


id: PBO:0001239
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"from cerevisie","termid":"PBO:0001239"}


id: GO:1905953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lipid localization.","definition_xrefs":["GOC:TermGenie","PMID:17564681","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of lipid localization","termid":"GO:1905952"},{"relation_name":"negatively_regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid localization","synonyms":[{"name":"down regulation of lipid localisation","type":"exact"},{"name":"down regulation of lipid localization","type":"exact"},{"name":"down-regulation of lipid localisation","type":"exact"},{"name":"down-regulation of lipid localization","type":"exact"},{"name":"downregulation of lipid localisation","type":"exact"},{"name":"downregulation of lipid localization","type":"exact"},{"name":"inhibition of lipid localisation","type":"narrow"},{"name":"inhibition of lipid localization","type":"narrow"},{"name":"negative regulation of lipid localisation","type":"exact"}],"termid":"GO:1905953"}


id: PATO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000282 f1 fertility (obsolete PATO:0000282)","termid":"PATO:0000282"}


id: GO:0030105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Extreme immunological sensitivity of the body or tissues to the reintroduction of an antigen. It is a form of anamnestic reaction and is accompanied by pathological changes in tissues or organs due to the release of pharmacologically active substances.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete anaphylaxis (obsolete GO:0030105)","synonyms":[{"name":"anaphylaxis","type":"exact"}],"termid":"GO:0030105"}


id: GO:0106256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A hydroperoxy icosatetraenoate = an oxoicosatetraenoate + H2O.","definition_xrefs":["RHEA:55556","PMID:12881489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"hydroperoxy icosatetraenoate dehydratase activity","secondary_identifiers":["EC:4.2.1.152"],"termid":"GO:0106256"}


id: PBO:0109386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 17A","termid":"PBO:0109386"}


id: PBO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit","termid":"PBO:0044688"}


id: PBO:0042983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 9","termid":"PBO:0042983"}


id: GO:0034686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta8 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alphav-beta8 complex","synonyms":[{"name":"ITGAV-ITGB8 complex","type":"narrow"},{"name":"alphav-beta8 integrin complex","type":"exact"}],"termid":"GO:0034686"}


id: GO:0033066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA recombinase mediator complex that contains the Rad51 paralogs RAD51B and RAD51C, or orthologs thereof.","definition_xrefs":["PMID:16093548","GOC:mah","PMID:17114795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase mediator complex","termid":"GO:0033061"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Rad51B-Rad51C complex","synonyms":[{"name":"BC complex","type":"exact"}],"termid":"GO:0033066"}


id: PBO:0048948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 1 like 1","termid":"PBO:0048948"}


id: GO:0006066
data:
  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id: MONDO:0100491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare and extreme form of psoriasis characterized by the appearance of sterile pustules which can take many patterns. All the main pathological features of the disease are accentuated. Generalized pustular psoriasis is clinically heterogeneous in its age at onset, precipitants, severity, and natural history. Many overlapping clinical entities are recognized. There is a relationship between these entities and plaque psoriasis, as some individuals may have episodes of plaque psoriasis preceding or following the generalized pustular psoriasis, but in others generalized pustular psoriasis occurs as the sole phenotype without plaque psoriasis at any time.","definition_xrefs":["PMID:29630241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pustular psoriasis","termid":"MONDO:0022205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"generalized pustular psoriasis","secondary_identifiers":["MEDGEN:473074","ICD10CM:L40.1","UMLS:C0343055","Orphanet:247353","SCTID:238612002"],"termid":"MONDO:0100491","xrefs":{"Monarch":{"xref_id":"0100491"}}}


id: RO:0002627
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  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_killed_by","termid":"RO:0002627"}


id: MONDO:1012046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar cortical atrophy, non-human animal","termid":"MONDO:1011836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, domestic cat","secondary_identifiers":["OMIA:000177-9685"],"termid":"MONDO:1012046","xrefs":{"Monarch":{"xref_id":"1012046"}}}


id: PBO:0088618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly factor 4 Sdh8","termid":"PBO:0088618"}


id: PBO:0109375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 8","termid":"PBO:0109375"}


id: PBO:0086346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of 5,10-methylene-THF in the cytoplasm","termid":"PBO:0086346"}


id: PBO:0049271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSG1 like 2","termid":"PBO:0049271"}


id: PBO:0114110
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"much shorter than S. c Ina22, butpicked up by Jackhmmr with good score/motif conservation","termid":"PBO:0114110"}


id: PBO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 17 pseudogene","termid":"PBO:0042642"}


id: FYPO:0004571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during cellular response to oxidative stress","termid":"FYPO:0001279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"increased RNA level during cellular response to H2O2","type":"exact"},{"name":"increased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"increased transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004571"}


id: PR:Q10178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01797","PANTHER:PTHR12097:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.09c","secondary_identifiers":["UniProtKB:Q10178"],"synonyms":[{"name":"Spom972h-SF3B1","type":"exact"}],"termid":"PR:Q10178"}


id: GO:0015565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of threonine from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-threonine transmembrane transporter activity","termid":"GO:0015195"},{"relation_name":"is_a","term_name":"L-amino acid efflux transmembrane transporter activity","termid":"GO:0034639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"threonine efflux transmembrane transporter activity","synonyms":[{"name":"threonine efflux permease activity","type":"exact"},{"name":"threonine export protein","type":"related"},{"name":"threonine export transporter activity","type":"exact"}],"termid":"GO:0015565"}


id: MONDO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory optic neuropathy characterized by isolated episodes (either single or recurrent) of optic neuritis not associated with other neurological or systemic disease. Patients typically present with subacute unilateral loss of vision progressing over several days to two weeks, periocular pain and pain on eye movement (which may precede the onset of visual symptoms), light flashes on eye movement, abnormal color vision, reduced contrast sensitivity, and relative afferent pupillary defect. The optic disk appears swollen in many patients, and uveitis may be associated and can be present for years before the onset of optic neuritis.","definition_xrefs":["Orphanet:499096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune/inflammatory optic neuropathy","termid":"MONDO:0044685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated optic neuritis","secondary_identifiers":["GARD:22039","UMLS:C0022023","MEDGEN:43952"],"synonyms":[{"name":"ION","type":"exact"},{"name":"ion","type":"exact"}],"termid":"MONDO:0044688","xrefs":{"Monarch":{"xref_id":"0044688"}}}


id: PBO:0081726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 654","termid":"PBO:0081726"}


id: PBO:0051270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 1","termid":"PBO:0051270"}


id: PBO:0073762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 pseudogene 1","termid":"PBO:0073762"}


id: GO:0019702
data:
  {"annotated_genes":["SJAG_02271"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80018],"is_not":false,"summary":null,"term":"GO:0019702"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the delta-nitrogen atom of peptidyl-arginine residues. The reaction is S-adenosyl-L-methionine + [protein]-L-arginine = S-adenosyl-L-homocysteine + [protein]-N5-methyl-L-arginine.","definition_xrefs":["EC:2.1.1.322","PMID:11856739","PMID:9873020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"protein arginine N5-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:48116"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-N5-methyl-L-arginine-forming)","type":"related"},{"name":"protein arginine N5-methylase activity","type":"exact"},{"name":"protein-arginine N5-methyltransferase activity","type":"exact"},{"name":"protein-arginine delta-N-methyltransferase activity","type":"exact"},{"name":"type IV PRMT activity","type":"exact"},{"name":"type IV protein arginine methyltransferase activity","type":"exact"}],"termid":"GO:0019702","terms_by_termid":{"GO:0019702":null}}


id: PBO:0073860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A8","termid":"PBO:0073860"}


id: MONDO:0700132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"neurocristopathy, non-human animal","termid":"MONDO:1011337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, non-human animal","secondary_identifiers":["OMIA:002231"],"termid":"MONDO:0700132","xrefs":{"Monarch":{"xref_id":"0700132"}}}


id: PR:Q10443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nod1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12B10.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.10","synonyms":[{"name":"Spom972h-nod1","type":"exact"}],"termid":"PR:Q10443"}


id: FYECO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which biotin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ biotin","termid":"FYECO:0000191"}


id: GO:0106354
data:
  {"annotated_genes":["SJAG_03984","SJAG_04824","SJAG_04006","SJAG_01191","SJAG_01176","SJAG_04153","SJAG_03745","SJAG_03179","SJAG_01818","SJAG_01521","SJAG_01702","SJAG_04084","SJAG_02275","SJAG_00854","SJAG_04818","SJAG_16455","SJAG_04321","SJAG_03276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90063,94721,115348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180037"},{"annotations":[72085,70908,115698,71275,101877,70351,77272,107264,97026,99404,88124,115256,106269,74800,69893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading defective or aberrant tRNAs.","definition_xrefs":["PMID:32841241","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA decay","termid":"GO:0016078"},{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01702":null,"SJAG_01818":null,"SJAG_02275":null,"SJAG_03179":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA surveillance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0106354","terms_by_termid":{"GO:0071038":null,"GO:0180037":null}}


id: PBO:0080664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 10A","termid":"PBO:0080664"}


id: PBO:0080365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 20 pseudogene","termid":"PBO:0080365"}


id: MONDO:0011995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-congenital heart disease-neural tube defect syndrome is a multiple congenital anomaly syndrome characterized by sacral neural tube defects resulting in tethered cord, atrial and/or ventricular septal heart defects (that are detected in infancy), bilateral, symmetrical hyperopia, rapidly progressive early childhood cataracts, bilateral aphakic glaucoma, and abnormal facial features (low frontal hairline, small ears, short philtrum, prominent, widely spaced central incisors, and micrognathia). hypotonia, growth and developmental delay, seizures, and joint limitation are also reported.","definition_xrefs":["Orphanet:314993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract - congenital heart disease - neural tube defect syndrome","secondary_identifiers":["MESH:C564271","UMLS:C1842363","MEDGEN:330832","OMIM:608227","GARD:17440"],"synonyms":[{"name":"craniofacial abnormalities, cataracts, congenital heart disease, sacral neural tube defects, and growth and developintellectual disability","type":"related"},{"name":"craniofacial abnormalities, cataracts, congenital heart disease, sacral neural tube defects, and growth and developmental retardation","type":"related"}],"termid":"MONDO:0011995","xrefs":{"Monarch":{"xref_id":"0011995"}}}


id: GO:0098883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the controlled breakdown of synapse. After it starts the process is continuous until the synapse has disappeared.","definition_xrefs":["GOC:dos","PMID:12062020","PMID:18083105","PMID:29844190","PMID:22632716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"is_a","term_name":"cell junction disassembly","termid":"GO:0150146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synapse pruning","synonyms":[{"name":"synapse clearance","type":"exact"},{"name":"synapse disassembly","type":"exact"},{"name":"synapse elimination","type":"exact"},{"name":"synapse removal","type":"exact"}],"termid":"GO:0098883"}


id: PBO:0042447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 5","termid":"PBO:0042447"}


id: PBO:0074091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 6","termid":"PBO:0074091"}


id: GO:0102073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: OPC8-3-hydroxyacyl-CoA = OPC8-trans-2-enoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.17"],"gene_count":0,"genotype_count":0,"name":"obsolete OPC8-trans-2-enoyl-CoA hydratase activity (obsolete GO:0102073)","termid":"GO:0102073"}


id: PBO:0089661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-translocating ATPase complex Lem3 family subunit","termid":"PBO:0089661"}


id: FYPO:0003353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which DNA double-strand break formation is normal (i.e. indistinguishable from wild type) during gene conversion at the mating-type locus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal DNA double-strand break formation at mating-type locus","synonyms":[{"name":"normal DNA double-strand break formation at mating-type locus during gene conversion","type":"exact"},{"name":"normal DNA double-strand break formation at mating-type locus during mitotic cell cycle","type":"related"},{"name":"normal DNA double-strand break formation at mating-type locus during vegetative growth","type":"exact"},{"name":"normal DNA double-strand break formation during gene conversion at mating-type locus","type":"exact"},{"name":"normal DSB formation at mat1","type":"exact"},{"name":"normal DSB formation at mating-type locus","type":"exact"},{"name":"normal DSB formation proximal to mat1","type":"exact"},{"name":"normal gene conversion at mating-type locus, DNA double-strand break formation","type":"exact"}],"termid":"FYPO:0003353"}


id: PBO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked non-specific mental retardation","termid":"PBO:0001530"}


id: GO:0046280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chalcone, phenyl steryl ketone or its hydroxylated derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chalcone metabolic process","termid":"GO:0009714"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"chalcone catabolic process","synonyms":[{"name":"chalcone breakdown","type":"exact"},{"name":"chalcone catabolism","type":"exact"},{"name":"chalcone degradation","type":"exact"}],"termid":"GO:0046280"}


id: GO:0033269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath.","definition_xrefs":["GOC:mah","GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"internode region of axon","secondary_identifiers":["NIF_Subcellular:sao206157942"],"synonyms":[{"name":"internode","type":"exact"}],"termid":"GO:0033269"}


id: PBO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2","termid":"PBO:0061465"}


id: PBO:0033754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteolysis_during_vegetative_growth","termid":"PBO:0033754"}


id: GO:1901839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of RNA polymerase I regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of RNA polymerase I regulatory region sequence-specific DNA binding (obsolete GO:1901839)","termid":"GO:1901839"}


id: GO:0036150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylserine, through sequential deacylation and re-acylation reactions, to generate phosphatidylserine containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:18458083","PMID:18287005","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylserine acyl-chain remodeling","secondary_identifiers":["Reactome:R-HSA-1482801"],"synonyms":[{"name":"phosphatidyl-L-serine acyl-chain remodeling","type":"exact"},{"name":"phosphatidylserine acyl-chain remodelling","type":"exact"}],"termid":"GO:0036150"}


id: PBO:0043925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 4","termid":"PBO:0043925"}


id: PBO:0077129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TINCR ubiquitin domain containing","termid":"PBO:0077129"}


id: PBO:0090486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1","termid":"PBO:0090486"}


id: PBO:0049465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin C (Gerbich blood group)","termid":"PBO:0049465"}


id: PBO:0044209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin O","termid":"PBO:0044209"}


id: PBO:0060581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 18, pseudogene","termid":"PBO:0060581"}


id: MONDO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process that affects the choroid.","definition_xrefs":["NCIT:C35111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"posterior uveitis","termid":"MONDO:0006918"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"choroiditis","secondary_identifiers":["MedDRA:10036370","MEDGEN:40282","MESH:D002833","DOID:11406","Orphanet:280892","UMLS:C0008526","icd11.foundation:1884626736","NORD:1601","HP:0012123","SCTID:16553002","GARD:4457"],"synonyms":[{"name":"Choroiditides","type":"exact"},{"name":"Posterior Uveitis","type":"related"},{"name":"choroiditis","type":"exact"},{"name":"posterior uveitis","type":"related"},{"name":"posterior uveitis (disease)","type":"related"}],"termid":"MONDO:0001280","xrefs":{"Monarch":{"xref_id":"0001280"}}}


id: PBO:0055624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3063","termid":"PBO:0055624"}


id: PBO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (predicted)","termid":"PBO:0002196"}


id: PBO:0062834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex non-catalytic subunit","termid":"PBO:0062834"}


id: PATO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved or tilted such that the tip points upwards.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upturned","termid":"PATO:0002031"}


id: PBO:0076405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 3","termid":"PBO:0076405"}


id: PBO:0017020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR5","termid":"PBO:0017020"}


id: PBO:0048746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1","termid":"PBO:0048746"}


id: GO:0032407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutSalpha mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MutSalpha complex binding","termid":"GO:0032407"}


id: PBO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit gamma2","termid":"PBO:0048209"}


id: PBO:0051457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-43","termid":"PBO:0051457"}


id: SO:1001254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is predicted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"predicted","termid":"SO:0000732"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_predicted","synonyms":[{"name":"CDS predicted","type":"exact"}],"termid":"SO:1001254"}


id: GO:1905872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell leading edge.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26324884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell leading edge","termid":"GO:1905871"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell leading edge","termid":"GO:1902463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell leading edge","synonyms":[{"name":"down regulation of protein localisation in cell leading edge","type":"exact"},{"name":"down regulation of protein localisation to cell leading edge","type":"exact"},{"name":"down regulation of protein localization in cell leading edge","type":"exact"},{"name":"down regulation of protein localization to cell leading edge","type":"exact"},{"name":"down-regulation of protein localisation in cell leading edge","type":"exact"},{"name":"down-regulation of protein localisation to cell leading edge","type":"exact"},{"name":"down-regulation of protein localization in cell leading edge","type":"exact"},{"name":"down-regulation of protein localization to cell leading edge","type":"exact"},{"name":"downregulation of protein localisation in cell leading edge","type":"exact"},{"name":"downregulation of protein localisation to cell leading edge","type":"exact"},{"name":"downregulation of protein localization in cell leading edge","type":"exact"},{"name":"downregulation of protein localization to cell leading edge","type":"exact"},{"name":"inhibition of protein localisation in cell leading edge","type":"narrow"},{"name":"inhibition of protein localisation to cell leading edge","type":"narrow"},{"name":"inhibition of protein localization in cell leading edge","type":"narrow"},{"name":"inhibition of protein localization to cell leading edge","type":"narrow"},{"name":"negative regulation of protein localisation in cell leading edge","type":"exact"},{"name":"negative regulation of protein localisation to cell leading edge","type":"exact"},{"name":"negative regulation of protein localization in cell leading edge","type":"exact"}],"termid":"GO:1905872"}


id: PBO:0062177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily M member 2","termid":"PBO:0062177"}


id: PBO:0071682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 14","termid":"PBO:0071682"}


id: PR:P87313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malignant T cell-amplified sequence 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03852","PRO:DNx","PANTHER:PTHR22798:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery-associated protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.12","secondary_identifiers":["UniProtKB:P87313"],"synonyms":[{"name":"Spom972h-MCTS1","type":"exact"}],"termid":"PR:P87313"}


id: PBO:0049252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone regulated TBC protein 1","termid":"PBO:0049252"}


id: PBO:0089231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI family protein, domain found in context with a broad range of enzymes","termid":"PBO:0089231"}


id: PBO:0084478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type locus; note that the systematic sequence in SGD contains MATalpha sequences","termid":"PBO:0084478"}


id: GO:0004097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 catechol + O2 = 2 1,2-benzoquinone + 2 H2O. This reaction catalyzes exclusively the oxidation of catechols (i.e., o-diphenols) to the corresponding o-quinones.","definition_xrefs":["EC:1.10.3.1","PMID:22120533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"catechol oxidase activity","secondary_identifiers":["GO:0036263","RHEA:21632","GO:0102316","GO:0036264","MetaCyc:CATECHOL-OXIDASE-RXN"],"synonyms":[{"name":"L-DOPA monooxygenase activity","type":"narrow"},{"name":"L-dopa oxidase activity","type":"narrow"},{"name":"catecholase","type":"exact"},{"name":"diphenol oxidase activity","type":"exact"},{"name":"dopamine monooxygenase activity","type":"narrow"},{"name":"o-diphenol oxidoreductase","type":"exact"},{"name":"o-diphenolase activity","type":"exact"},{"name":"phenolase activity","type":"broad"},{"name":"polyphenol oxidase activity","type":"related"},{"name":"pyrocatechol oxidase","type":"broad"},{"name":"tyrosinase activity","type":"broad"}],"termid":"GO:0004097"}


id: PR:Q10081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ElaA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0039 protein C11D3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.02c","secondary_identifiers":["UniProtKB:Q10081"],"synonyms":[{"name":"Spom972h-elaA","type":"exact"}],"termid":"PR:Q10081"}


id: GO:0042047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the W-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear tungsten ion (W) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor biosynthetic process","termid":"GO:0032324"},{"relation_name":"is_a","term_name":"W-molybdopterin cofactor metabolic process","termid":"GO:0042046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"W-molybdopterin cofactor biosynthetic process","synonyms":[{"name":"Moco biosynthesis","type":"broad"},{"name":"Moco biosynthetic process","type":"broad"},{"name":"W-molybdopterin cofactor anabolism","type":"exact"},{"name":"W-molybdopterin cofactor biosynthesis","type":"exact"},{"name":"W-molybdopterin cofactor formation","type":"exact"},{"name":"W-molybdopterin cofactor synthesis","type":"exact"}],"termid":"GO:0042047"}


id: GO:0007560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from an imaginal disc are generated and organized. The imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc morphogenesis","secondary_identifiers":["GO:0007452"],"synonyms":[{"name":"imaginal disc metamorphosis","type":"exact"}],"termid":"GO:0007560"}


id: PBO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQGAP","termid":"PBO:0001655"}


id: PBO:0078969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 1-1","termid":"PBO:0078969"}


id: GO:0051642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a centrosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center localization","termid":"GO:0061842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"centrosome localization","synonyms":[{"name":"centrosome localisation","type":"exact"},{"name":"establishment and maintenance of centrosome localization","type":"exact"}],"termid":"GO:0051642"}


id: GO:0090421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Initiation of a region of tissue in a plant embryo that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic meristem initiation","termid":"GO:0090421"}


id: GO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous GTP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in the yeast Saccharomyces cerevisiae where the ligation reaction also produces a 2'-phosphate at the splice junction which is subsequently removed as part of the ligation process.","definition_xrefs":["PMID:9299409","GOC:krc","PMID:18217203"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA exon ligation utilizing GTP as source of linkage phosphate (obsolete GO:0000970)","termid":"GO:0000970"}


id: MONDO:0009312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of the peptidic growth factors is characterized by loss of subcutaneous fat layers on the limbs, lipodystrophy in the face and trunk and scleroderma-like skin disorders (thickened skin on the palms and soles and skin pigment changes on the limbs and trunk).","definition_xrefs":["Orphanet:1979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"lipodystrophy due to peptidic growth factors deficiency","secondary_identifiers":["GARD:12604","MEDGEN:419375","MESH:C565529","SCTID:724176001","UMLS:C2931279","icd11.foundation:1235390174","OMIM:233805"],"synonyms":[{"name":"Hoepffner Dreyer Reimers syndrome","type":"related"},{"name":"Hoepffner-Dreyer-Reimers syndrome","type":"exact"},{"name":"Werner-like syndrome due to combined Growth Factor deficiency","type":"related"},{"name":"Werner-like syndrome due to combined growth factor deficiency","type":"exact"},{"name":"combined insulin, insulin-like growth factor 1 (IGF1) and epidermal growth factor (EGF) deficiency","type":"exact"},{"name":"growth factors, combined defect OF","type":"related"},{"name":"insulin, insulin-like Growth Factor I, and Epidermal Growth Factor deficiency","type":"related"},{"name":"peptide growth factors deficiency","type":"related"},{"name":"peptidic growth factors deficiency","type":"related"}],"termid":"MONDO:0009312","xrefs":{"Monarch":{"xref_id":"0009312"}}}


id: PBO:0047133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 171 member A2","termid":"PBO:0047133"}


id: PATO:0000893
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000893 backcross fertility value (obsolete PATO:0000893)","termid":"PATO:0000893"}


id: GO:2000105
data:
  {"annotated_genes":["SJAG_00364","SJAG_03438","SJAG_02074","SJAG_03695","SJAG_03720","SJAG_03048","SJAG_03160","SJAG_03957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111835,117087,103112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[102163,88807,116042,106419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[95507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[102167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-templated DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA replication","termid":"GO:0045740"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"positively_regulates","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA-templated DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of DNA-dependent DNA replication","type":"exact"}],"termid":"GO:2000105","terms_by_termid":{"GO:0090297":null,"GO:1903465":null,"GO:1903468":null,"GO:1904514":null}}


id: MONDO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilatation of the intestinal lymphatic system usually caused by an obstruction in the intestinal wall. It may be congenital or acquired and is characterized by diarrhea; hypoproteinemia; peripheral and/or abdominal edema; and protein-losing enteropathies.","definition_xrefs":["MESH:D008201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal lymphangiectasia","secondary_identifiers":["MEDGEN:9828","NANDO:2100256","MedDRA:10025213","icd11.foundation:1255239964","Orphanet:36204","ICD9:457.1","UMLS:C0024215","SCTID:197260007","HP:0002593","NANDO:2200914","GARD:12331"],"synonyms":[{"name":"intestinal lymphangiectasia","type":"exact"},{"name":"intestinal lymphangiectasia (disease)","type":"exact"}],"termid":"MONDO:0018178","xrefs":{"Monarch":{"xref_id":"0018178"}}}


id: MONDO:1012273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombopathia, non-human animal","termid":"MONDO:1011695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombopathia, dog","secondary_identifiers":["OMIA:001003-9615"],"termid":"MONDO:1012273","xrefs":{"Monarch":{"xref_id":"1012273"}}}


id: GO:1901115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of erythromycin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00240","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"erythromycin metabolic process","termid":"GO:1901113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"erythromycin biosynthetic process","synonyms":[{"name":"erythromycin anabolism","type":"exact"},{"name":"erythromycin biosynthesis","type":"exact"},{"name":"erythromycin formation","type":"exact"},{"name":"erythromycin synthesis","type":"exact"}],"termid":"GO:1901115"}


id: MONDO:0006797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinopathy due to hypertension.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypertensive retinopathy","secondary_identifiers":["NCIT:C3514","DOID:11561","EFO:1000977","icd11.foundation:218513628","MedDRA:10020839","SCTID:6962006","UMLS:C0152132","MESH:D058437","ICD9:362.11","MEDGEN:101819"],"termid":"MONDO:0006797","xrefs":{"Monarch":{"xref_id":"0006797"}}}


id: PBO:0076909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 1","termid":"PBO:0076909"}


id: MONDO:0859574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"annular epidermolytic ichthyosis","termid":"MONDO:0011870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"ichthyosis, annular epidermolytic, 2","secondary_identifiers":["OMIM:620148","MEDGEN:1824037","UMLS:C5774264"],"termid":"MONDO:0859574","xrefs":{"Monarch":{"xref_id":"0859574"}}}


id: GO:0034339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a ligand-bound hormone receptor acts in the nucleus to modulate the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mh","GO_REF:0000021","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:0034339)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:0034339"}


id: MOD:01072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one potassium atom for one hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium containing modified residue","termid":"MOD:00849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopotassium salt","synonyms":[{"name":"K1Res","type":"exact"}],"termid":"MOD:01072"}


id: MONDO:0017476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upper limb hypertrophy","secondary_identifiers":["GARD:21212","Orphanet:295049","MEDGEN:488921","UMLS:C0575518","icd11.foundation:663591902"],"termid":"MONDO:0017476","xrefs":{"Monarch":{"xref_id":"0017476"}}}


id: MONDO:0012233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any Li-Fraumeni syndrome in which the cause of the disease is a mutation in the CHEK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete Li-Fraumeni syndrome 2 (obsolete MONDO:0012233)","secondary_identifiers":["DOID:0111504","MESH:C563755","OMIM:609265"],"synonyms":[{"name":"CHEK2 Li-Fraumeni syndrome","type":"exact"},{"name":"LFS2","type":"related"},{"name":"Li-Fraumeni syndrome 2","type":"exact"},{"name":"Li-Fraumeni syndrome caused by mutation in CHEK2","type":"exact"},{"name":"Li-Fraumeni syndrome type 2","type":"exact"}],"termid":"MONDO:0012233","xrefs":{"Monarch":{"xref_id":"0012233"}}}


id: MONDO:0005279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The obstruction of the pulmonary artery or one of its branches by an embolus, sometimes associated with infarction of the lung.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary embolism","secondary_identifiers":["MEDGEN:11027","EFO:0003827","UMLS:C0034065","ICD9:415.19","DOID:9477","HP:0002204","NCIT:C50713","SCTID:59282003","MESH:D011655"],"synonyms":[{"name":"embolism, pulmonary","type":"exact"},{"name":"pulmonary artery embolism","type":"exact"},{"name":"pulmonary embolism","type":"exact"},{"name":"pulmonary embolism (disease)","type":"exact"},{"name":"pulmonary embolus","type":"exact"}],"termid":"MONDO:0005279","xrefs":{"Monarch":{"xref_id":"0005279"}}}


id: PBO:0063071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine oxidase","termid":"PBO:0063071"}


id: PBO:0057301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 514a-2","termid":"PBO:0057301"}


id: MONDO:0018082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aorto-ventricular tunnel is a congenital, extracardiac channel which connects the ascending aorta above the sinotubular junction to the cavity of the left, or (less commonly) right ventricle.","definition_xrefs":["Orphanet:3400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aorto-ventricular tunnel","secondary_identifiers":["GARD:18798","HP:0011627","MEDGEN:868852","MESH:D000082903","UMLS:C4023262"],"synonyms":[{"name":"aorto-ventricular tunnel","type":"exact"},{"name":"aorto-ventricular tunnel (disease)","type":"exact"}],"termid":"MONDO:0018082","xrefs":{"Monarch":{"xref_id":"0018082"}}}


id: PBO:0059630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH2 pseudogene 2","termid":"PBO:0059630"}


id: PBO:0014617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside triphosphatase Ham1 (predicted)","termid":"PBO:0014617"}


id: GO:0102172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NADH + O2 + H+ = 4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NAD + 2 H2O.","definition_xrefs":["GOC:pz","RHEA:58860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol-4alpha-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11925"],"termid":"GO:0102172"}


id: PBO:0073683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 5","termid":"PBO:0073683"}


id: MONDO:0014933
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86908],"is_not":false,"summary":null,"term":"MONDO:0014933"}]},"cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the UBA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 44","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310700","OMIM:617132","DOID:0080424","MEDGEN:934667","GARD:16198"],"synonyms":[{"name":"DEE44","type":"exact"},{"name":"EIEE44","type":"exact"},{"name":"UBA5 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 44","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in UBA5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 44","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 44; EIEE44","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 44","type":"exact"}],"termid":"MONDO:0014933","terms_by_termid":{"MONDO:0014933":null},"xrefs":{"Monarch":{"xref_id":"0014933"}}}


id: PBO:0068537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 140, pseudogene","termid":"PBO:0068537"}


id: PBO:0045070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 2","termid":"PBO:0045070"}


id: GO:1901129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gentamycin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"gentamycin metabolic process","termid":"GO:1901128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gentamycin catabolic process","synonyms":[{"name":"gentamycin breakdown","type":"exact"},{"name":"gentamycin catabolism","type":"exact"},{"name":"gentamycin degradation","type":"exact"}],"termid":"GO:1901129"}


id: PBO:0073641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 28, pseudogene","termid":"PBO:0073641"}


id: GO:0070135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan.","definition_xrefs":["PMID:18234669","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"beta-1,2-oligomannoside metabolic process","synonyms":[{"name":"beta-1,2-oligomannoside metabolism","type":"exact"}],"termid":"GO:0070135"}


id: PBO:0050327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 29","termid":"PBO:0050327"}


id: FYPO:0003029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mRNA splicing via the spliceosome is decreased.","definition_xrefs":["PMID:24298023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"decreased RNA splicing","termid":"FYPO:0003040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mRNA splicing, via spliceosome","synonyms":[{"name":"decreased mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"decreased mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"decreased splicing","type":"broad"},{"name":"reduced mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0003029"}


id: PBO:0086497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pimeloyl-CoA synthetase involved in biotin biosynthesis; in S. cerevisiae strains YJM627 and A364a; highly degraded pseudogenic copy of BIO1/YAR070W-A, which is a paralog of YJR154W","termid":"PBO:0086497"}


id: PBO:0082143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of meiotic anaphase promoting complex (APC/C); Cdc20p family member; required for initiation of spore wall assembly; required for Clb1p degradation during meiosis; prevents premature assembly of the meiosis I spindle, required for DSB induced prophase I arrest","termid":"PBO:0082143"}


id: PBO:0045942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B2","termid":"PBO:0045942"}


id: GO:0006506
data:
  {"annotated_genes":["SJAG_04975","SJAG_03506","SJAG_04165","SJAG_00831","SJAG_04924","SJAG_03878","SJAG_04337","SJAG_02488","SJAG_01227","SJAG_02776","SJAG_04119","SJAG_03801","SJAG_03066","SJAG_02523","SJAG_00068","SJAG_06425","SJAG_06383","SJAG_01416","SJAG_00295","SJAG_04881","SJAG_02913","SJAG_02804","SJAG_05327","SJAG_05278","SJAG_03672","SJAG_00846","SJAG_01860","SJAG_03115","SJAG_01570","SJAG_03292"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57640,57993,58040,58151,60206,62276,62851,63192,69453,71482,72434,72806,72994,74530,75286,75309,76108,76211,76802,77245,77252,77255,77522,77612,77989,87182,89300,92753,103498,103560],"is_not":false,"summary":null,"term":"GO:0006506"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage.","definition_xrefs":["ISBN:0198547684","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor metabolic process","termid":"GO:0006505"},{"relation_name":"is_a","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"part_of","term_name":"GPI anchored protein biosynthesis","termid":"GO:0180046"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"GPI anchor biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162710","GO:0015998"],"synonyms":[{"name":"GPI anchor anabolism","type":"exact"},{"name":"GPI anchor biosynthesis","type":"exact"},{"name":"GPI anchor formation","type":"exact"},{"name":"GPI anchor synthesis","type":"exact"},{"name":"GPI/GSI anchor biosynthesis","type":"broad"},{"name":"GPI/GSI anchor biosynthetic process","type":"broad"},{"name":"glycosylphosphatidylinositol biosynthesis","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthetic process","type":"exact"}],"termid":"GO:0006506","terms_by_termid":{"GO:0006506":null}}


id: GO:0150052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynapse assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynapse.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:16672654","PMID:28185854","PMID:16394100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"regulation of postsynapse organization","termid":"GO:0099175"},{"relation_name":"regulates","term_name":"postsynapse assembly","termid":"GO:0099068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of postsynapse assembly","termid":"GO:0150052"}


id: GO:0075265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of oogonium development","termid":"GO:0075264"},{"relation_name":"positively_regulates","term_name":"oogonium development","termid":"GO:0075263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oogonium development","termid":"GO:0075265"}


id: PBO:0080093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase like 1","termid":"PBO:0080093"}


id: FYPO:0001782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is constricted in the middle, resembling a figure 8.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002403","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"constricted nucleus","synonyms":[{"name":"constricted nuclei","type":"exact"},{"name":"constricted nucleus during mitotic cell cycle","type":"related"},{"name":"constricted nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0001782"}


id: GO:0034976
data:
  {"annotated_genes":["SJAG_00941","SJAG_00948","SJAG_07000","SJAG_04345","SJAG_00627","SJAG_00530","SJAG_04429","SJAG_01709","SJAG_03482","SJAG_00790","SJAG_00403","SJAG_04283","SJAG_04435","SJAG_00131","SJAG_00288","SJAG_01528","SJAG_02694","SJAG_04612","SJAG_01626","SJAG_04583","SJAG_00931","SJAG_04384","SJAG_05022","SJAG_01134","SJAG_00681","SJAG_01858","SJAG_04904","SJAG_03032","SJAG_03345","SJAG_01585","SJAG_03841","SJAG_01051","SJAG_05274","SJAG_00126","SJAG_01768","SJAG_02774","SJAG_02685","SJAG_01527","SJAG_03153","SJAG_04046","SJAG_04103","SJAG_01854","SJAG_03611","SJAG_00766","SJAG_02244","SJAG_04471","SJAG_02601","SJAG_00226","SJAG_03227","SJAG_01516","SJAG_01656","SJAG_03237","SJAG_03657","SJAG_04262","SJAG_04118","SJAG_01038","SJAG_02539"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72532,79896,96317,104477,118213],"is_not":false,"summary":null,"term":"GO:0034976"},{"annotations":[70895,106976,113609,67766,116586,75990,113880,76948,70319,98500,114012,115838,101025,117036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030968"},{"annotations":[78264,107473,78236,107908,111777,70318,70291,89294,91159,115666,100556,98006,75989,104527,102714,70894,78422,70705,116402,79210,116964,78484,78465,74568,94745,97615,94478,104611,73004,74065,93329,71874,87539,70379,107973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[92855,77624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036498"},{"annotations":[77808,77307],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904293"},{"annotations":[75240,78791],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[93306,95469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stress acting at the endoplasmic reticulum. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.","definition_xrefs":["GOC:mah","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00226":null,"SJAG_00288":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00766":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01038":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01516":null,"SJAG_01527":null,"SJAG_01528":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01656":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02244":null,"SJAG_02539":null,"SJAG_02601":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03237":null,"SJAG_03345":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04046":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to endoplasmic reticulum stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER stress response","type":"exact"},{"name":"cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"response to ER stress","type":"exact"}],"termid":"GO:0034976","terms_by_termid":{"GO:0030968":null,"GO:0030970":null,"GO:0034976":null,"GO:0036498":null,"GO:0036503":null,"GO:0097466":null,"GO:1904293":null}}


id: PBO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor like 2","termid":"PBO:0072667"}


id: MONDO:0003889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive transitional cell carcinoma of the bladder characterized by the presence of clear cells.","definition_xrefs":["NCIT:C39827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infiltrating bladder urothelial carcinoma, clear cell variant","secondary_identifiers":["DOID:6476","MEDGEN:268572","UMLS:C1512737"],"synonyms":[{"name":"clear cell variant infiltrating bladder urothelial carcinoma","type":"related"},{"name":"infiltrating bladder urothelial carcinoma, clear cell variant","type":"exact"}],"termid":"MONDO:0003889","xrefs":{"Monarch":{"xref_id":"0003889"}}}


id: GO:0097317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a biotic stimulus. An example of this is Candida albicans forming invasive filaments in agar medium in response to a serum stimulus.","definition_xrefs":["PMID:18679170","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"},{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to biotic stimulus","termid":"GO:0097317"}


id: PBO:0091833
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bubble","termid":"PBO:0091833"}


id: FYECO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sorbitol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sorbitol","termid":"FYECO:0000025"}


id: PBO:0012261
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA Elimination Defective","termid":"PBO:0012261"}


id: GO:1990740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the non-selective, energy-independent passage of anions across a lipid bilayer down a concentration gradient.","definition_xrefs":["ISBN:0878937420","Wikipedia:Ion_channel#Classification_by_type_of_ions","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete non-selective anion channel activity (obsolete GO:1990740)","synonyms":[{"name":"nonselective anion channel activity","type":"exact"}],"termid":"GO:1990740"}


id: MONDO:1012516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"goldenhar syndrome, non-human animal","termid":"MONDO:1011657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goldenhar syndrome, domestic cat","secondary_identifiers":["OMIA:002136-9685"],"termid":"MONDO:1012516","xrefs":{"Monarch":{"xref_id":"1012516"}}}


id: PR:Q9P7J7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ada2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adapter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.08c","synonyms":[{"name":"Spom972h-ada2","type":"exact"}],"termid":"PR:Q9P7J7"}


id: GO:0071233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-leucine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to L-leucine","termid":"GO:0043201"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-leucine","synonyms":[{"name":"cellular response to leucine","type":"broad"}],"termid":"GO:0071233"}


id: PBO:0058470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5572","termid":"PBO:0058470"}


id: PBO:0091907
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a disordered region N-terminal to the YTH domain stabilizes RNA binding, and becomes more ordered upon binding","termid":"PBO:0091907"}


id: GO:0033886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2- and 3-sulfate groups of the polysulfates of cellulose and charonin.","definition_xrefs":["EC:3.1.6.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"cellulose-polysulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.7-RXN"],"synonyms":[{"name":"cellulose-sulfate sulfohydrolase activity","type":"related"}],"termid":"GO:0033886"}


id: PATO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of having not yet acquired a special structure of function.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undifferentiated","termid":"PATO:0002100"}


id: MONDO:0006543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic skin disorder caused by mutations in the type VII collagen gene (COL7A1). It is characterized by the formation of blisters and scarring in the skin and mucous membranes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epidermolysis bullosa","termid":"MONDO:0006541"},{"relation_name":"is_a","term_name":"inherited epidermolysis bullosa","termid":"MONDO:0019276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa dystrophica","secondary_identifiers":["ICD9:757.39","MEDGEN:37179","EFO:1000692","icd11.foundation:1060981106","GARD:2150","SCTID:254185007","MESH:D016108","DOID:4959","UMLS:C0079294","NCIT:C84691","Wikipedia:Epidermolysis_bullosa_dystrophica","Orphanet:303"],"synonyms":[{"name":"DEB","type":"exact"},{"name":"dermolytic epidermolysis bullosa","type":"exact"},{"name":"epidermolysis bullosa dystrophica","type":"exact"},{"name":"epidermolysis bullosa, dermolytic","type":"related"}],"termid":"MONDO:0006543","xrefs":{"Monarch":{"xref_id":"0006543"}}}


id: PBO:0059652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 18","termid":"PBO:0059652"}


id: PBO:0064777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase 2","termid":"PBO:0064777"}


id: GO:0019232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an organism senses the speed and direction of movement of the body and its parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proprioception","termid":"GO:0019230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perception of rate of movement","synonyms":[{"name":"kinesthesia","type":"exact"}],"termid":"GO:0019232"}


id: FYPO:0006149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to idarubicin. Cells stop growing (and may die) at a concentration of idarubicin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to idarubicin","synonyms":[{"name":"hypersensitive to idarubicin","type":"exact"},{"name":"sensitive to idarubicin during mitotic cell cycle","type":"related"},{"name":"sensitive to idarubicin during vegetative growth","type":"exact"}],"termid":"FYPO:0006149"}


id: GO:0032661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["GOC:mah","PMID:23710316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-18 production","secondary_identifiers":["GO:0045381","GO:0150120"],"synonyms":[{"name":"regulation of IL-18 production","type":"exact"},{"name":"regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032661"}


id: PBO:0049443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 1","termid":"PBO:0049443"}


id: PBO:0044235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 4A pseudogene 1","termid":"PBO:0044235"}


id: PATO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's having fewer processual parts.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extra or missing processual parts","termid":"PATO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"having decreased processual parts","termid":"PATO:0001570"}


id: PBO:0028444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028444"}


id: PBO:0057434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 551b","termid":"PBO:0057434"}


id: MONDO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial DNA depletion syndrome 6 (obsolete MONDO:0000868)","synonyms":[{"name":"MTDPS6","type":"exact"},{"name":"mitochondrial DNA depletion syndrome type 6","type":"exact"}],"termid":"MONDO:0000868","xrefs":{"Monarch":{"xref_id":"0000868"}}}


id: GO:0048060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism away from the source of gravity.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gravitaxis","termid":"GO:0042332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative gravitaxis","secondary_identifiers":["GO:0048063"],"synonyms":[{"name":"negative geotactic behavior","type":"exact"},{"name":"negative geotactic behaviour","type":"exact"},{"name":"negative gravitactic behavior","type":"exact"},{"name":"negative gravitactic behaviour","type":"exact"},{"name":"negative taxis in response to gravity","type":"exact"},{"name":"negative taxis in response to gravitytaxis in response to gravitational stimulus","type":"exact"}],"termid":"GO:0048060"}


id: PATO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000777 long term memory value (obsolete PATO:0000777)","termid":"PATO:0000777"}


id: PBO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single-stranded DNA binding protein Rim1","termid":"PBO:0002293"}


id: GO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["ISBN:0198600461","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"},{"relation_name":"is_a","term_name":"alkanesulfonate biosynthetic process","termid":"GO:0046305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"taurine biosynthetic process","synonyms":[{"name":"taurine anabolism","type":"exact"},{"name":"taurine biosynthesis","type":"exact"},{"name":"taurine formation","type":"exact"},{"name":"taurine synthesis","type":"exact"}],"termid":"GO:0042412"}


id: MONDO:0015634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A osteopoikilosis (disease) that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopoikilosis","termid":"MONDO:0001414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated osteopoikilosis","secondary_identifiers":["MEDGEN:318940","Orphanet:166119","UMLS:C1833699","GARD:17027"],"synonyms":[{"name":"isolated osteopoikilosis (disease)","type":"exact"},{"name":"nonsyndromic osteopoikilosis (disease)","type":"exact"}],"termid":"MONDO:0015634","xrefs":{"Monarch":{"xref_id":"0015634"}}}


id: PBO:0046743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 2","termid":"PBO:0046743"}


id: PBO:0076016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 10","termid":"PBO:0076016"}


id: PBO:0002392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 regulator Dap1","termid":"PBO:0002392"}


id: PBO:0040765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3","termid":"PBO:0040765"}


id: GO:0100007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates ceramide biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ceramide biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100007)","termid":"GO:0100007"}


id: PBO:0036479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone Cox17 (predicted)","termid":"PBO:0036479"}


id: MONDO:0020160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary entropion (obsolete MONDO:0020160)","secondary_identifiers":["Orphanet:98569"],"termid":"MONDO:0020160","xrefs":{"Monarch":{"xref_id":"0020160"}}}


id: GO:0071700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory placode to attain its fully functional state. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"olfactory placode development","termid":"GO:0071698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode maturation","termid":"GO:0071700"}


id: PBO:0048169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 antisense RNA 1","termid":"PBO:0048169"}


id: MONDO:0035461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic disease with glomerulopathy as a major feature (obsolete MONDO:0035461)","secondary_identifiers":["Orphanet:567554"],"termid":"MONDO:0035461","xrefs":{"Monarch":{"xref_id":"0035461"}}}


id: GO:0050825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ice, water reduced to the solid state by cold temperature. It is a white or transparent colorless substance, crystalline, brittle, and viscoidal.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ice binding","synonyms":[{"name":"ice crystal binding","type":"exact"},{"name":"ice nucleation inhibitor activity","type":"related"}],"termid":"GO:0050825"}


id: PBO:0039044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 intronic transcript 1","termid":"PBO:0039044"}


id: FYECO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium sulfide (Na2S) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na2S","synonyms":[{"name":"sodium sulfide added","type":"exact"}],"termid":"FYECO:0000165"}


id: MONDO:0850421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute pancreatits that is characterized by acute inflammation of the pancreas in which the initial edematous pancreatitis evolved into necrosis accompanied by hemorrhage.","definition_xrefs":["DOID:0080999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute pancreatitis","termid":"MONDO:0006515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"acute hemorrhagic pancreatitis","secondary_identifiers":["MEDGEN:541079","UMLS:C0267940"],"termid":"MONDO:0850421","xrefs":{"Monarch":{"xref_id":"0850421"}}}


id: PBO:0061945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily S member 2","termid":"PBO:0061945"}


id: GO:0034091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"regulates","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"}


id: PBO:0012288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase","termid":"PBO:0012288"}


id: MONDO:0030029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, mild, with joint laxity and advanced bone age","secondary_identifiers":["UMLS:C5394341","OMIM:618870","MEDGEN:1711043"],"synonyms":[{"name":"SDJLABA","type":"exact"},{"name":"SKELETAL DYSPLASIA, MILD, WITH JOINT LAXITY AND ADVANCED BONE AGE","type":"exact"},{"name":"skeletal dysplasia, mild, with joint laxity and advanced bone age","type":"exact"}],"termid":"MONDO:0030029","xrefs":{"Monarch":{"xref_id":"0030029"}}}


id: GO:0051425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphotyrosine-binding (PTB) Binding to a phosphotyrosine-bindin domain.","definition_xrefs":["Pfam:PF02174","PMID:15924411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"PTB domain binding","synonyms":[{"name":"PID binding","type":"broad"},{"name":"phosphotyrosine-interacting domain binding","type":"exact"}],"termid":"GO:0051425"}


id: PBO:0073242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 7","termid":"PBO:0073242"}


id: GO:0141180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A chromatin-protein adaptor activity that bridges dsDNA and chromatin proteins to bring regions of a chromosome in proximity. The DNA:DNA:RNA triple-helical structure is formed non-Watson-Crick base-pairing.","definition_xrefs":["PMID:35412350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-protein adaptor activity","termid":"GO:0140463"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0003677","GO:0060090","GO:0005488","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"dsDNA-RNA triple helix-forming chromatin adaptor activity","termid":"GO:0141180"}


id: PBO:0067364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 464, pseudogene","termid":"PBO:0067364"}


id: PBO:0048906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member A","termid":"PBO:0048906"}


id: MONDO:0002762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of esophageal squamous cell carcinoma. It is an exophytic, cauliflower-like or papillary mass that can arise in any part of the esophagus. This variant of squamous cell carcinoma grows slowly and invades locally, with a very low metastasizing potential. (WHO)","definition_xrefs":["NCIT:C27420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal squamous cell carcinoma","termid":"MONDO:0005580"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophagus verrucous carcinoma","secondary_identifiers":["DOID:3747","MEDGEN:272594","UMLS:C1333470"],"synonyms":[{"name":"esophageal verrucous cancer","type":"exact"},{"name":"esophageal verrucous carcinoma","type":"exact"},{"name":"esophagus verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of esophagus","type":"exact"},{"name":"verrucous carcinoma of oesophagus","type":"exact"},{"name":"verrucous carcinoma of the esophagus","type":"exact"},{"name":"verrucous carcinoma of the oesophagus","type":"exact"}],"termid":"MONDO:0002762","xrefs":{"Monarch":{"xref_id":"0002762"}}}


id: GO:0010131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose by the enzymatic action of either invertase or sucrose synthase.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using invertase or sucrose synthase (obsolete GO:0010131)","synonyms":[{"name":"sucrose breakdown, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolic process, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolism, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose degradation, using invertase or sucrose synthase","type":"exact"}],"termid":"GO:0010131"}


id: FYPO:0007304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short bipolar mitotic spindle","termid":"FYPO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000120","FYPO:0001320"],"is_obsolete":false,"name":"short bipolar mitotic spindle during anaphase","synonyms":[{"name":"decreased mitotic spindle length during anaphase","type":"exact"},{"name":"short mitotic spindle during anaphase","type":"exact"},{"name":"short mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"short mitotic spindles during anaphase","type":"exact"},{"name":"short spindle during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007304"}


id: PBO:0074462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4 pseudogene 2","termid":"PBO:0074462"}


id: PBO:0044890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1 pseudogene 1","termid":"PBO:0044890"}


id: PBO:0075796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sex determining region Y","termid":"PBO:0075796"}


id: MOD:01719
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl with one of the Proteome Sciences TMT6plex reagent reporter+balance acyloxy groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex reporter+balance reagent O-acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01719"}


id: PBO:0082102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-ATPase involved in multivesicular body (MVB) protein sorting; ATP-bound Vps4p localizes to endosomes and catalyzes ESCRT-III disassembly and membrane release; ATPase activity is activated by Vta1p; regulates cellular sterol metabolism","termid":"PBO:0082102"}


id: PBO:0089146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh41","termid":"PBO:0089146"}


id: GO:0071784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the endoplasmic reticulum (ER) cisternal network. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["PMID:20434336","GOC:mah","PMID:16469703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"endoplasmic reticulum cisternal network organization","termid":"GO:0071783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network assembly","synonyms":[{"name":"ER cisternal network assembly","type":"exact"},{"name":"ER cisternal network formation","type":"exact"},{"name":"endoplasmic reticulum cisternal network formation","type":"exact"}],"termid":"GO:0071784"}


id: GO:0030324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["GOC:jid","UBERON:0002048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung development","termid":"GO:0030324"}


id: PBO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen15 (predicted)","termid":"PBO:0002033"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["PMID:29315936","GOC:eab","RHEA:54676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: FYPO:0001626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular glycine level","termid":"FYPO:0001637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar glycine level","synonyms":[{"name":"normal level of glycine in vacuole","type":"exact"},{"name":"normal vacuolar glycine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar glycine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001626"}


id: GO:0060805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of transcription from an RNA polymerase II promoter ultimately resulting in a decrease in trophoblast stem cells differentiating into the more mature cells of the trophoblast.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of trophoblast cell differentiation by transcription regulation from RNA polymerase II promoter (obsolete GO:0060805)","termid":"GO:0060805"}


id: PBO:0108965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1B","termid":"PBO:0108965"}


id: PBO:0090479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ family ubiquitin-type ligase substrate adaptor Btb1","termid":"PBO:0090479"}


id: PBO:0091072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex E3 subunit Hrd1","termid":"PBO:0091072"}


id: PBO:0013754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0013754"}


id: MONDO:0003562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the rete testis. Representative examples include adenoma and adenocarcinoma.","definition_xrefs":["NCIT:C39955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete testis neoplasm","secondary_identifiers":["MEDGEN:308162","UMLS:C1514912","DOID:5639"],"synonyms":[{"name":"neoplasm of rete testis","type":"exact"},{"name":"rete testis neoplasm","type":"exact"},{"name":"rete testis neoplasm (disease)","type":"exact"},{"name":"rete testis tumor","type":"exact"},{"name":"rete testis tumour","type":"exact"},{"name":"tumor of rete testis","type":"exact"},{"name":"tumour of rete testis","type":"exact"}],"termid":"MONDO:0003562","xrefs":{"Monarch":{"xref_id":"0003562"}}}


id: GO:0042328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"heparan sulfate N-acetylglucosaminyltransferase activity","synonyms":[{"name":"heparan sulphate N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"heparin N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0042328"}


id: PBO:0066224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 27","termid":"PBO:0066224"}


id: PBO:0061815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 5 Y-linked","termid":"PBO:0061815"}


id: PBO:0029312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_butyrate","termid":"PBO:0029312"}


id: PBO:0029713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phenotype","termid":"PBO:0029713"}


id: GO:0051395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nerve growth factor receptor activity (obsolete GO:0051395)","synonyms":[{"name":"down regulation of nerve growth factor receptor activity","type":"exact"},{"name":"down-regulation of nerve growth factor receptor activity","type":"exact"},{"name":"downregulation of nerve growth factor receptor activity","type":"exact"},{"name":"inhibition of nerve growth factor receptor activity","type":"narrow"},{"name":"negative regulation of NGF receptor activity","type":"exact"}],"termid":"GO:0051395"}


id: MONDO:0034661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic biliary atresia (obsolete MONDO:0034661)","secondary_identifiers":["Orphanet:498350"],"termid":"MONDO:0034661","xrefs":{"Monarch":{"xref_id":"0034661"}}}


id: PBO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; mRNA identified as translated by ribosome profiling data; overlaps the verified gene DIA1/YMR316W","termid":"PBO:0086012"}


id: PBO:0056466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST3 antisense RNA 1","termid":"PBO:0056466"}


id: PBO:0056819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 12","termid":"PBO:0056819"}


id: PBO:0077476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 198B (pseudogene)","termid":"PBO:0077476"}


id: MONDO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inability to recognize or interpret objects by sight.","definition_xrefs":["NCIT:C35276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"},{"relation_name":"is_a","term_name":"vision disorder","termid":"MONDO:0021084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visual agnosia","secondary_identifiers":["MEDGEN:115959","UMLS:C0234502","SCTID:25762009","DOID:0060155","HP:0030222"],"synonyms":[{"name":"visual agnosia","type":"exact"},{"name":"visual agnosia (disease)","type":"exact"},{"name":"visuoperceptual agnosia","type":"exact"}],"termid":"MONDO:0000685","xrefs":{"Monarch":{"xref_id":"0000685"}}}


id: GO:0009786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asymmetric cell division","termid":"GO:0009786"}


id: MONDO:0006474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the transitional epithelium, usually affecting the urinary bladder, ureter, or renal pelvis. It may or may not have a papillary configuration. It is graded 1 to 3 or 4 according to the degree of cellular differentiation and architectural patterns. Grade 1 transitional cell carcinoma is histologically benign but it may recur. Transitional cell carcinomas may also affect the upper respiratory tract and the ovaries.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"transitional cell carcinoma","secondary_identifiers":["NCIT:C6783","EFO:1000601","ICDO:8120/3","NCIT:C2930","MESH:D002295","GARD:7794","UMLS:C0007138","MEDGEN:2875","DOID:2671"],"synonyms":[{"name":"carcinoma of transitional epithelial cell","type":"exact"},{"name":"carcinoma of urothelial cell","type":"exact"},{"name":"carcinoma, urothelial, malignant","type":"exact"},{"name":"transitional carcinoma","type":"exact"},{"name":"transitional cell carcinoma","type":"exact"},{"name":"transitional cell neoplasm","type":"broad"},{"name":"transitional cell tumor","type":"broad"},{"name":"transitional cell tumour","type":"broad"},{"name":"transitional epithelial cell carcinoma","type":"exact"},{"name":"urothelial cell carcinoma","type":"exact"}],"termid":"MONDO:0006474","xrefs":{"Monarch":{"xref_id":"0006474"}}}


id: MONDO:0030920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 54","secondary_identifiers":["MEDGEN:1614787","UMLS:C4540484","DOID:0080230","OMIM:617799","GARD:16474"],"synonyms":[{"name":"MRD54","type":"related"},{"name":"autosomal dominant intellectual disability 54","type":"related"},{"name":"autosomal dominant mental retardation 54","type":"related"},{"name":"intellectual disability, autosomal dominant 54","type":"exact"},{"name":"mental retardation, autosomal dominant 54","type":"related"}],"termid":"MONDO:0030920","xrefs":{"Monarch":{"xref_id":"0030920"}}}


id: PBO:0082983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosine deaminase; zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to uracil; of biomedical interest because it also catalyzes the deamination of 5-fluorocytosine (5FC) to form anticancer drug 5-fluorouracil (5FU)","termid":"PBO:0082983"}


id: PBO:0002867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine phosphatase Pyp1","termid":"PBO:0002867"}


id: MONDO:0003073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trilateral retinoblastoma refers to bilateral (or less often unilateral) retinoblastoma associated with an intracranial primitive neuroectodermal tumor in the pineal or suprasellar region. This syndrome is often associated with a increased familial incidence of retinoblastoma. (From Cancer 86(1): 135-141, 1999).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"trilateral retinoblastoma","secondary_identifiers":["NCIT:C7019","DOID:4647","UMLS:C2608045","MEDGEN:392856"],"termid":"MONDO:0003073","xrefs":{"Monarch":{"xref_id":"0003073"}}}


id: GO:0000448
data:
  {"annotated_genes":["SJAG_03789","SJAG_02374","SJAG_02275","SJAG_01581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71010,91453,94718,103902],"is_not":false,"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within ITS2 between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01581":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000490"],"synonyms":[{"name":"cleavage at C2","type":"related"},{"name":"cleavage in ITS2 of tricistronic rRNA transcript to separate 5.8S and LSU rRNAs (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"GO:0000448","terms_by_termid":{"GO:0000448":null}}


id: GO:0020007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A group of cytoskeletal structures and associated membrane-bounded organelles found at the anterior end of adult obligate intracellular protozoan parasites in the phylum Apicomplexa. The apical complex is involved in attachment to and penetration of the host cell, and in parasite proliferation.","definition_xrefs":["PMID:16518471","GOC:mb","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical complex","termid":"GO:0020007"}


id: PBO:0087951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF5; functions as both a GTPase-activating protein (GAP) that stimulates the hydrolysis of GTP bound to eIF-2, as part of the 43S preinitiation complex, and as a GDP dissociation inhibitor (GDI) to prevent recycling of eIF2; human ortholog eIF5 complements the yeast null mutant","termid":"PBO:0087951"}


id: GO:0099021
data:
  {"annotated_genes":["SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92847],"is_not":false,"summary":null,"term":"GO:0099021"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the cortical endoplasmic reticulum.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"cortical endoplasmic reticulum","termid":"GO:0032541"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cortical endoplasmic reticulum lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099021","terms_by_termid":{"GO:0099021":null}}


id: PBO:0090504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Acr1","termid":"PBO:0090504"}


id: MONDO:0017733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidosis","termid":"MONDO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"alpha-mannosidosis, adult form","secondary_identifiers":["SCTID:58112007","Orphanet:309288","GTR:AN0103810","GTR:AN0103811","NANDO:1200128","MEDGEN:1843432","GARD:17408","NANDO:2201189","UMLS:C5679974"],"synonyms":[{"name":"Alpha-mannosidosis adult-onset form","type":"related"},{"name":"lysosomal alpha-D-mannosidase deficiency, adult form","type":"exact"}],"termid":"MONDO:0017733","xrefs":{"Monarch":{"xref_id":"0017733"}}}


id: PATO:0001196
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the abdomen of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral to","synonyms":[{"name":"anterior_ to","type":"exact"}],"termid":"PATO:0001196"}


id: MONDO:1012245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone degeneration, non-human animal","termid":"MONDO:1011981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone degeneration, domestic cat","secondary_identifiers":["OMIA:000880-9685"],"termid":"MONDO:1012245","xrefs":{"Monarch":{"xref_id":"1012245"}}}


id: GO:0046092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxycytidine, 2-deoxyribosylcytosine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxycytidine metabolic process","synonyms":[{"name":"deoxycytidine metabolism","type":"exact"}],"termid":"GO:0046092"}


id: PBO:0091712
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facilitates Rad51 assembly at damage sites independently of Rad57","termid":"PBO:0091712"}


id: MONDO:0100274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of plasmalogen biosynthesis in which the cause of the disease is a mutation in the AGPS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of plasmalogens biosynthesis","termid":"MONDO:0017986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0019053"],"is_obsolete":false,"name":"alkylglycerone-phosphate synthase deficiency","synonyms":[{"name":"AGPS deficiency","type":"exact"},{"name":"alkylglycerone-phosphate synthase deficiency","type":"exact"}],"termid":"MONDO:0100274","xrefs":{"Monarch":{"xref_id":"0100274"}}}


id: PBO:0088455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12/MIND complex subunit Nnf1","termid":"PBO:0088455"}


id: MONDO:0008151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gnathodiaphyseal dysplasia (GDD) is a bone dysplasia characterized by bone fragility, frequent bone fractures at a young age, cemento-osseous lesions of the jaw bones, bowing of tubular bones (tibia and fibula) and diaphyseal sclerosis of long bones associated with generalized osteopenia. GD follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:53697"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"gnathodiaphyseal dysplasia","secondary_identifiers":["OMIM:166260","SCTID:715568002","UMLS:C1833736","MEDGEN:331575","DOID:0111533","icd11.foundation:1984860886","MESH:C536039","GARD:8698"],"synonyms":[{"name":"GDD","type":"exact"},{"name":"GNATHODIAPHYSEAL dysplasia","type":"related"},{"name":"Gnathodiaphyseal sclerosis","type":"related"},{"name":"Levin syndrome 2","type":"related"},{"name":"gnathodiaphyseal dysplasia","type":"exact"},{"name":"osteogenesis imperfecta Levin type","type":"related"},{"name":"osteogenesis imperfecta with unusual skeletal lesions","type":"related"}],"termid":"MONDO:0008151","xrefs":{"Monarch":{"xref_id":"0008151"}}}


id: PATO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape with three supports or legs.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripodal","termid":"PATO:0002428"}


id: PBO:0003724
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.13","termid":"PBO:0003724"}


id: PATO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is 180 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straight angle to","termid":"PATO:0001322"}


id: PBO:0081479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 354C","termid":"PBO:0081479"}


id: PBO:0073559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 2","termid":"PBO:0073559"}


id: PBO:0042614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 14","termid":"PBO:0042614"}


id: MONDO:0022481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"APO A-i deficiency","secondary_identifiers":["GARD:758"],"termid":"MONDO:0022481","xrefs":{"Monarch":{"xref_id":"0022481"}}}


id: PBO:0036263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dihydroorotate dehydrogenase Ura3","termid":"PBO:0036263"}


id: GO:0061518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a microglial cell population by cell division.","definition_xrefs":["GOC:dph","PMID:17344397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"},{"relation_name":"is_a","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell proliferation","termid":"GO:0061518"}


id: PBO:0077617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 8","termid":"PBO:0077617"}


id: GO:1901102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of gramicidin S.","definition_xrefs":["UniPathway:UPA00102","GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete gramicidin S catabolic process (obsolete GO:1901102)","synonyms":[{"name":"gramicidin S breakdown","type":"exact"},{"name":"gramicidin S catabolism","type":"exact"},{"name":"gramicidin S degradation","type":"exact"}],"termid":"GO:1901102"}


id: MONDO:0022546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete basal cell nevus anodontia abnormal bone mineralization (obsolete MONDO:0022546)","termid":"MONDO:0022546","xrefs":{"Monarch":{"xref_id":"0022546"}}}


id: PBO:0084594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL012C-A was originally annotated as an independent ORF but due to a sequence change was merged with an adjacent ORF into a single reading frame, designated YJL012C/VTC4","termid":"PBO:0084594"}


id: PBO:0072927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 8","termid":"PBO:0072927"}


id: MONDO:0700112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any visceral hetetotaxy in which the cause of the disease is a mutation in the NODAL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 5, autosomal","secondary_identifiers":["UMLS:C3495537","OMIM:270100","MEDGEN:501198"],"synonyms":[{"name":"HTX5","type":"exact"},{"name":"NODAL visceral heterotaxy","type":"exact"},{"name":"SIV","type":"exact"},{"name":"situs inversus viscerum","type":"exact"},{"name":"visceral heterotaxy caused by mutation in NODAL","type":"exact"}],"termid":"MONDO:0700112","xrefs":{"Monarch":{"xref_id":"0700112"}}}


id: GO:0060189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of protein desumoylation. Protein desumoylation is the process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein desumoylation","termid":"GO:0060188"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein desumoylation","termid":"GO:0016926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein desumoylation","termid":"GO:0060189"}


id: GO:1902514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of generation of calcium ion transmembrane transport via high voltage-gated calcium channel.","definition_xrefs":["GOC:TermGenie","GOC:dph","GOC:pg","PMID:1611048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion transmembrane transport via high voltage-gated calcium channel","termid":"GO:0061577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"regulation of generation of L-type calcium current","type":"related"}],"termid":"GO:1902514"}


id: PBO:0029805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_and_cells_with_abnormal_shape_(obsolete_FYPO:0002432)","termid":"PBO:0029805"}


id: GO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of antral follicles due to cell proliferation and/or growth of the antral cavity.","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antral ovarian follicle growth","termid":"GO:0001547"}


id: MOD:00717
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a methylated phenylalanine, such as N-methyl-L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated phenylalanine","synonyms":[{"name":"MePhe","type":"exact"}],"termid":"MOD:00717"}


id: PBO:0067421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 539, pseudogene","termid":"PBO:0067421"}


id: PBO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim8 (predicted)","termid":"PBO:0000180"}


id: GO:1903772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral budding via host ESCRT complex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24878737","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral budding via host ESCRT complex","termid":"GO:0039702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral budding via host ESCRT complex","synonyms":[{"name":"regulation of host-assisted viral budding","type":"broad"},{"name":"regulation of viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:1903772"}


id: PBO:0029171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_rapamycin","termid":"PBO:0029171"}


id: PR:Q9Y813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpr2 gene.","definition_xrefs":["UniProtKB:Q9Y813","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit rpr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.16c","synonyms":[{"name":"RNA-processing protein rpr2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpr2","type":"exact"}],"termid":"PR:Q9Y813"}


id: PATO:0002420
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having both hydrophilic and hydrophobic (or lipophilic) groups.","definition_xrefs":["wikipedia:http://en.wiktionary.org/wiki/amphiphilic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amphiphilic","termid":"PATO:0002420"}


id: RO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity and a condition (a phenotype or disease) of a host, in which the material entity is not part of the host, and is considered harmless to non-allergic hosts, and the condition results in pathological processes that include an abnormally strong immune response against the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_allergic_trigger_for","termid":"RO:0001020"}


id: PBO:0108893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 6","termid":"PBO:0108893"}


id: FYPO:0005352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of spindle microtubules to kinetochore mitosis","type":"exact"},{"name":"normal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"normal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005352"}


id: GO:0019545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including succinate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate metabolic process","termid":"GO:0006105"},{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"arginine catabolic process to succinate","synonyms":[{"name":"arginine breakdown to succinate","type":"exact"},{"name":"arginine degradation to succinate","type":"exact"}],"termid":"GO:0019545"}


id: RO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of connecting branch of","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_connecting_branch","termid":"RO:0002253"}


id: PATO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001058 absolute acceleration (obsolete PATO:0001058)","termid":"PATO:0001058"}


id: SO:0000693
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an mRNA that is recoded.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded","termid":"SO:0000881"},{"relation_name":"is_a","term_name":"protein_coding_gene","termid":"SO:0001217"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_recoded_mRNA","synonyms":[{"name":"gene with recoded mRNA","type":"exact"}],"termid":"SO:0000693"}


id: MONDO:0100486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acne that occurs in an adult.","definition_xrefs":["MONDO:patterns/adult"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acne","termid":"MONDO:0011438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"adult acne","secondary_identifiers":["UMLS:C1858506","MEDGEN:348960","OMIM:604324","MESH:C565791"],"synonyms":[{"name":"acne, adult","type":"exact"}],"termid":"MONDO:0100486","xrefs":{"Monarch":{"xref_id":"0100486"}}}


id: PBO:0066721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 18","termid":"PBO:0066721"}


id: GO:0014051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gamma-aminobutyric acid by a cell or a tissue. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transport","termid":"GO:0015812"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid secretion","synonyms":[{"name":"GABA secretion","type":"exact"}],"termid":"GO:0014051"}


id: GO:0034293
data:
  {"annotated_genes":["SJAG_02712","SJAG_02248","SJAG_04868","SJAG_00971","SJAG_03250","SJAG_04781","SJAG_04238","SJAG_04275","SJAG_03557","SJAG_03587","SJAG_04615","SJAG_03536","SJAG_03746","SJAG_01531","SJAG_04010","SJAG_04271","SJAG_04470","SJAG_03013","SJAG_04184","SJAG_03483","SJAG_00826","SJAG_04901","SJAG_00663","SJAG_00114","SJAG_03688","SJAG_03915","SJAG_05309","SJAG_02529","SJAG_00993","SJAG_00486","SJAG_01769","SJAG_00974","SJAG_01017","SJAG_04483","SJAG_02718","SJAG_04859","SJAG_01483","SJAG_04236","SJAG_04080","SJAG_00405","SJAG_03090","SJAG_00821","SJAG_03057","SJAG_04922","SJAG_04140","SJAG_02169","SJAG_04853","SJAG_01321","SJAG_02320","SJAG_02241","SJAG_01662"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112508,96285,100513,111308,96707,104920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[111113,93776],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94222],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[91527,88450,89998,87957],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[72696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[103958,117602,108873,117594,113886],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[104771,72697,91257],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[109912,118644,118824,101498,118343,107184,98613,91046,97325,99690,95131,97364,105087,113733],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[99622,99623,102706,113734,92049,97326,96640,106631,107518,103916],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[110996],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[102079],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[90482],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[91946],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[105811,94264,99905,99624,99625,115780],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The formation of spores derived from the products of meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"sporulation","termid":"GO:0043934"},{"relation_name":"part_of","term_name":"meiotic cell cycle","termid":"GO:0051321"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"sexual sporulation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic spore formation","type":"exact"},{"name":"meiotic sporulation","type":"exact"},{"name":"sexual spore formation","type":"exact"}],"termid":"GO:0034293","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0038944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase iron containing 1","termid":"PBO:0038944"}


id: PBO:0079936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor 1 pseudogene 1","termid":"PBO:0079936"}


id: MONDO:0010240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete androgen insensitivity syndrome (obsolete MONDO:0010240)","termid":"MONDO:0010240","xrefs":{"Monarch":{"xref_id":"0010240"}}}


id: PBO:0043682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortistatin","termid":"PBO:0043682"}


id: SO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe decrease in cds length that deletes one or more entire codons from the coding sequence but does not change any remaining codons.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_deletion","termid":"SO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_inframe_deletion","synonyms":[{"name":"conservative decrease in CDS length","type":"related"},{"name":"conservative inframe deletion","type":"exact"}],"termid":"SO:0001825"}


id: GO:0070816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to an amino acid residue in the C-terminal domain of RNA polymerase II. Typically, this occurs during the transcription cycle and results in production of an RNA polymerase II enzyme where the carboxy-terminal domain (CTD) of the largest subunit is extensively phosphorylated, often referred to as hyperphosphorylated or the II(0) form. Specific types of phosphorylation within the CTD are usually associated with specific regions of genes, though there are exceptions. The phosphorylation state regulates the association of specific complexes such as the capping enzyme or 3'-RNA processing machinery to the elongating RNA polymerase complex.","definition_xrefs":["GOC:krc","GOC:mah","PMID:17079683"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:0070816)","synonyms":[{"name":"CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:0070816"}


id: PBO:0075737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 5","termid":"PBO:0075737"}


id: GO:0070111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacteroid-containing symbiosome in which the bacterial component is a genetically highly reduced cyanobacterium that is photosynthetically active and incapable of an independent existence outside its host. The chromatophore functions as a photosynthetic organelle, and has been found and characterized in the amoeba Paulinella chromatophora.","definition_xrefs":["GOC:expert_mm","PMID:18356055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"organellar chromatophore","synonyms":[{"name":"Paulinella-type chromatophore","type":"exact"}],"termid":"GO:0070111"}


id: PBO:0028555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_import_into_nucleus","termid":"PBO:0028555"}


id: PBO:0011069
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in metazoa","termid":"PBO:0011069"}


id: FYPO:0002337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has one nucleus that is not in the normal location, is elongated, and is inviable.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized nucleus","termid":"FYPO:0006339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000005","FYPO:0000002","FYPO:0005447","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus","synonyms":[{"name":"elongated inviable vegetative cell, with mislocalized mononucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus location","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus position","type":"exact"},{"name":"inviable elongated mononucleate cell with displaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalised nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalized nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate cell with misplaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with asymmetrically localized nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"inviable long mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell with mislocalized nucleus","type":"exact"}],"termid":"FYPO:0002337"}


id: PBO:0053150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 7","termid":"PBO:0053150"}


id: MONDO:0003554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An unusual colon carcinoma characterized by the presence of glandular and squamous carcinomatous components. The two carcinomatous components may be admixed within the tumor, or the two may appear separately in different areas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal adenosquamous carcinoma","termid":"MONDO:0006157"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of colon","termid":"MONDO:0018513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous colon carcinoma","secondary_identifiers":["MEDGEN:232083","NCIT:C5491","DOID:5629","UMLS:C1333082"],"synonyms":[{"name":"adenosquamous carcinoma of colon","type":"exact"},{"name":"adenosquamous carcinoma of the colon","type":"exact"},{"name":"adenosquamous colon carcinoma","type":"exact"},{"name":"colon adenosquamous cancer","type":"exact"},{"name":"colon adenosquamous carcinoma","type":"exact"},{"name":"colonic adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0003554","xrefs":{"Monarch":{"xref_id":"0003554"}}}


id: MONDO:0033571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skeletal muscle glycogen content and metabolism quantitative trait locus (obsolete MONDO:0033571)","secondary_identifiers":["OMIM:619030"],"synonyms":[{"name":"SKELETAL MUSCLE GLYCOGEN CONTENT AND METABOLISM QUANTITATIVE TRAIT LOCUS","type":"related"},{"name":"SMGMQTL","type":"related"},{"name":"Skeletal muscle glycogen content and metabolism QTL","type":"exact"}],"termid":"MONDO:0033571","xrefs":{"Monarch":{"xref_id":"0033571"}}}


id: MONDO:1012357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypochondroplastic dwarfism, non-human animal","termid":"MONDO:1011957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypochondroplastic dwarfism, dog","secondary_identifiers":["OMIA:001296-9615"],"termid":"MONDO:1012357","xrefs":{"Monarch":{"xref_id":"1012357"}}}


id: GO:0016626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an acceptor other than NAD, NADP, oxygen, an iron-sulfur protein, disulphide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors (obsolete GO:0016626)","synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"exact"}],"termid":"GO:0016626"}


id: PBO:0074715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75B","termid":"PBO:0074715"}


id: PBO:0005044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Hif2","termid":"PBO:0005044"}


id: PBO:0039973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 4","termid":"PBO:0039973"}


id: PBO:0067715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 13","termid":"PBO:0067715"}


id: GO:0047450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-hydroxybutanoyl-[acyl-carrier-protein] = (2E)-butenoyl-[acyl-carrier-protein] + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase activity (obsolete GO:0047450)","synonyms":[{"name":"(3R)-hydroxybutanoyl-[acyl-carrier-protein] hydratase activity","type":"exact"},{"name":"3-hydroxybutyryl acyl carrier protein dehydratase activity","type":"exact"},{"name":"beta-hydroxybutyryl acyl carrier protein (ACP) dehydrase activity","type":"exact"},{"name":"crotonoyl-ACP hydratase activity","type":"exact"},{"name":"crotonoyl-[acyl-carrier protein] hydratase activity","type":"exact"},{"name":"crotonoyl-[acyl-carrier-protein] hydratase activity","type":"exact"},{"name":"crotonoyl-acyl-carrier-protein hydratase activity","type":"exact"},{"name":"crotonyl acyl carrier protein hydratase activity","type":"exact"}],"termid":"GO:0047450"}


id: PATO:0000369
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000369 unidirectional (obsolete PATO:0000369)","termid":"PATO:0000369"}


id: GO:0008344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a fully developed and mature organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult locomotory behavior","synonyms":[{"name":"adult locomotory behaviour","type":"exact"}],"termid":"GO:0008344"}


id: MONDO:0002981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small round cell tumor with neural differentiation arising from the bone. It may be associated with pain.","definition_xrefs":["NCIT:C8776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"peripheral primitive neuroectodermal tumor","termid":"MONDO:0018271"},{"relation_name":"is_a","term_name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor of bone","termid":"MONDO:0021123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral primitive neuroectodermal tumor of bone","secondary_identifiers":["DOID:4388","MEDGEN:163179","UMLS:C0855009"],"synonyms":[{"name":"bone peripheral neuroepithelioma","type":"exact"},{"name":"bone tissue peripheral primitive neuroectodermal tumor","type":"exact"},{"name":"bone tissue peripheral primitive neuroectodermal tumour","type":"exact"},{"name":"osseous peripheral neuroepithelioma","type":"exact"},{"name":"peripheral neuroectodermal tumor of bone","type":"exact"},{"name":"peripheral neuroectodermal tumor of the bone","type":"exact"},{"name":"peripheral neuroectodermal tumour of bone","type":"exact"},{"name":"peripheral neuroectodermal tumour of the bone","type":"exact"},{"name":"peripheral neuroepithelioma of bone","type":"exact"},{"name":"peripheral neuroepithelioma of the bone","type":"exact"},{"name":"peripheral primitive neuroectodermal tumor of bone","type":"exact"},{"name":"peripheral primitive neuroectodermal tumor of bone tissue","type":"exact"},{"name":"peripheral primitive neuroectodermal tumour of bone tissue","type":"exact"}],"termid":"MONDO:0002981","xrefs":{"Monarch":{"xref_id":"0002981"}}}


id: MONDO:0033969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease-recurrent sinopulmonary infections syndrome","secondary_identifiers":["Orphanet:529980","UMLS:C5568532","MEDGEN:1799955","GARD:22205"],"termid":"MONDO:0033969","xrefs":{"Monarch":{"xref_id":"0033969"}}}


id: GO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses fatty-acyl-CoA synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"fatty-acyl-CoA synthase complex","synonyms":[{"name":"fatty acyl CoA synthase complex","type":"exact"}],"termid":"GO:0005836"}


id: PATO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000180 body tone (obsolete PATO:0000180)","termid":"PATO:0000180"}


id: GO:0006069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An ethanol metabolic process in which ethanol is converted to acetyl-CoA via acetaldehyde and acetate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ethanol oxidation (obsolete GO:0006069)","termid":"GO:0006069"}


id: MONDO:0011060
data:
  {"annotated_genes":["SJAG_01242","SJAG_02919","SJAG_00750","SJAG_03815","SJAG_00624","SJAG_01745","SJAG_00404","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86669,86668,86670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013411"},{"annotations":[86683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011547"},{"annotations":[86067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013859"},{"annotations":[85191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014565"},{"annotations":[84847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014673"},{"annotations":[85745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008925"}]},"cv_name":"mondo","definition":"Early-onset non-syndromic cataract is a rare, genetic, non-syndromic developmental defect of the eye, with high clinical and genetic heterogeneity, most frequently characterized by bilateral, symmetrical, non-progressive cataracts which present at birth or in early-childhood. Additional ocular manifestations (e.g. anterior segment dysgenesis, colobomas, nystagmus, microcornea, microphthalmia, myopia) may be associated, however other organs/systems are usually not affected.","definition_xrefs":["Orphanet:91492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00624":null,"SJAG_00750":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset non-syndromic cataract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:601371","GARD:16801","UMLS:C1832423","icd11.foundation:1080602978","MEDGEN:371326"],"synonyms":[{"name":"cataract, age-related nuclear","type":"related"},{"name":"nuclear sclerosis of the lens","type":"related"}],"termid":"MONDO:0011060","terms_by_termid":{"MONDO:0008925":null,"MONDO:0011547":null,"MONDO:0013411":null,"MONDO:0013859":null,"MONDO:0014565":null,"MONDO:0014673":null},"xrefs":{"Monarch":{"xref_id":"0011060"}}}


id: GO:0010648
data:
  {"annotated_genes":["SJAG_01297","SJAG_04551","SJAG_02858","SJAG_02379","SJAG_00229","SJAG_04455","SJAG_00883","SJAG_03799","SJAG_03072","SJAG_04943","SJAG_03263","SJAG_00169","SJAG_03486","SJAG_03678","SJAG_01253","SJAG_03893","SJAG_01983","SJAG_01142","SJAG_00824","SJAG_00289","SJAG_01464","SJAG_01386","SJAG_02000","SJAG_04910","SJAG_00293","SJAG_02169","SJAG_03353","SJAG_01679","SJAG_03126","SJAG_04522","SJAG_00975","SJAG_02233","SJAG_01245","SJAG_02481","SJAG_00266","SJAG_00424","SJAG_00457","SJAG_05346","SJAG_04825","SJAG_02451","SJAG_00991","SJAG_03355","SJAG_03185","SJAG_00526","SJAG_04259","SJAG_02231","SJAG_00875","SJAG_00990","SJAG_01184","SJAG_00610","SJAG_02514","SJAG_03501","SJAG_02311","SJAG_06270","SJAG_01790","SJAG_00642","SJAG_04249","SJAG_03508","SJAG_02426","SJAG_02013","SJAG_02336","SJAG_01114","SJAG_00209","SJAG_03681","SJAG_04462","SJAG_03592","SJAG_03089","SJAG_02392","SJAG_05000","SJAG_02765","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99376,103681,113584,115709,111757,114072,90477,107032,108054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[107769,100226,91845,116189,92507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[100782,115937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[106845,107411,95612,118126,103589,99227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[101932,89183,102630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[87952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[93959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[94793,118127,91419,95733,116887,99229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[106937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[93083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[71909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[71236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[106897,109967,101063,99378,107034,72471,91489,93218,115712,95400,107341,92600,104837,90481,92684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[90994,105696,111510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[72828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[106950,114384,118040,109474,109069,113780,115938,99360,95860,93089,116292,73302,73273,102799,112963,116851,87768,79706,98661,101239,104929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[116083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01679":null,"SJAG_01790":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02169":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02426":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02514":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03799":null,"SJAG_03893":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05346":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell communication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010648","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0035024":null,"GO:0043409":null,"GO:0046580":null,"GO:0090029":null,"GO:0106057":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:2000639":null}}


id: PBO:0109473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-modified_residue","termid":"PBO:0109473"}


id: PBO:0087988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; introduces pseudouridines at positions 26-28, 34-36, 65, and 67 of tRNA; also acts on U2 snRNA; also pseudouridylates some mRNAs, and pseudouridylation level varies with growth phase; nuclear protein that appears to be involved in tRNA export; PUS1 has a paralog, PUS2, that arose from the whole genome duplication","termid":"PBO:0087988"}


id: FYPO:0002861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide uridylyltransferase (poly(U) polymerase) activity is decreased.","definition_xrefs":["PomBase:mah","PMID:17449726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal poly(U) polymerase activity","termid":"FYPO:0002860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased poly(U) polymerase activity","synonyms":[{"name":"decreased RNA uridylyltransferase activity","type":"exact"},{"name":"decreased polynucleotide uridylyltransferase activity","type":"exact"},{"name":"reduced poly(U) polymerase activity","type":"exact"}],"termid":"FYPO:0002861"}


id: PATO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000529 drug sensitive (obsolete PATO:0000529)","termid":"PATO:0000529"}


id: PR:O74908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-splicing endonuclease subunit Sen54 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21027:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit sen54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.09","secondary_identifiers":["UniProtKB:O74908"],"synonyms":[{"name":"SPCC613.09","type":"related"},{"name":"Spom972h-TSEN54","type":"exact"},{"name":"tRNA-intron endonuclease sen54 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74908"}


id: GO:0103066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol + NAD(P) = 4alpha-methyl-5alpha-cholesta-8-en-3-one + carbon dioxide + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-oxidoreductase (decarboxylating) activity (obsolete GO:0103066)","termid":"GO:0103066"}


id: PBO:0075935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20-MTHFS readthrough","termid":"PBO:0075935"}


id: GO:0050422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = D-glucose + strictosidine aglycone.","definition_xrefs":["RHEA:12917","EC:3.2.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"strictosidine beta-glucosidase activity","secondary_identifiers":["MetaCyc:STRICTOSIDINE-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R03820"],"synonyms":[{"name":"strictosidine b-glucosidase activity","type":"exact"},{"name":"strictosidine beta-D-glucohydrolase activity","type":"related"}],"termid":"GO:0050422"}


id: PBO:0064775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase 1","termid":"PBO:0064775"}


id: PBO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, poly(A)-bearing RNA (predicted)","termid":"PBO:0000102"}


id: GO:1903882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["PMID:20054338","GO_REF:0000058","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"negatively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of IL-17-mediated signalling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"negative regulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903882"}


id: MONDO:0005571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high mass or concentration of red blood cells in the blood, either due to an increase in erythropoiesis or a decrease in plasma volume.","definition_xrefs":["NCIT:C26863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"polycythemia","secondary_identifiers":["DOID:8432","MEDGEN:18552","MedDRA:10036051","MESH:D011086","UMLS:C0032461","HP:0001901","EFO:0005804","Orphanet:98427","GARD:19466"],"synonyms":[{"name":"erythrocythemia","type":"exact"},{"name":"polycythemia","type":"exact"},{"name":"polycythemia (disease)","type":"exact"}],"termid":"MONDO:0005571","xrefs":{"Monarch":{"xref_id":"0005571"}}}


id: PBO:0056221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member D1","termid":"PBO:0056221"}


id: PBO:0048510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 11","termid":"PBO:0048510"}


id: PBO:0016586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin/hydroxyisourate hydrolase (predicted)","termid":"PBO:0016586"}


id: PBO:0080123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP1 antisense RNA 1","termid":"PBO:0080123"}


id: PBO:0090737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic cohesin loader subunit Pds5","termid":"PBO:0090737"}


id: PBO:0041608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 39","termid":"PBO:0041608"}


id: GO:0072398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signal transduction process that contributes to a cytokinesis checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal transduction involved in cytokinesis checkpoint","secondary_identifiers":["GO:0072419"],"termid":"GO:0072398"}


id: PBO:0050872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH2 divergent transcript","termid":"PBO:0050872"}


id: MONDO:0002668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gallbladder adenocarcinoma (obsolete MONDO:0002668)","termid":"MONDO:0002668","xrefs":{"Monarch":{"xref_id":"0002668"}}}


id: PBO:0032734
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replaced existing SPAC110.05 which was in the wrong frame","termid":"PBO:0032734"}


id: GO:0045299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The precipitation of specific crystal forms of calcium carbonate with extracellular matrix proteins in the otolith organs of the vertebrate inner ear.","definition_xrefs":["PMID:15581873","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"},{"relation_name":"part_of","term_name":"otolith development","termid":"GO:0048840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otolith mineralization","termid":"GO:0045299"}


id: FYPO:0005734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAPD+ as a cofactor is decreased during a cellular response to iron ion starvation.","definition_xrefs":["PomBase:mah","PMID:20435771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased glutamate dehydrogenase (NADP+) activity","termid":"FYPO:0000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased glutamate dehydrogenase (NADP+) activity during cellular response to iron ion starvation","synonyms":[{"name":"decreased NAD(P)H-dependent glutamate dehydrogenase activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased NADP-GDH activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased glutamate dehydrogenase (NADP+) activity during iron ion starvation","type":"exact"}],"termid":"FYPO:0005734"}


id: PBO:0109090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 4","termid":"PBO:0109090"}


id: PBO:0039251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member A1","termid":"PBO:0039251"}


id: PR:000029043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe 972h- protein","synonyms":[{"name":"Spom972h- protein","type":"exact"}],"termid":"PR:000029043"}


id: GO:0002907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mature B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of B cell apoptotic process","termid":"GO:0002904"},{"relation_name":"is_a","term_name":"regulation of mature B cell apoptotic process","termid":"GO:0002905"},{"relation_name":"positively_regulates","term_name":"mature B cell apoptotic process","termid":"GO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mature B cell apoptotic process","synonyms":[{"name":"activation of mature B cell apoptosis","type":"narrow"},{"name":"positive regulation of mature B cell apoptosis","type":"narrow"},{"name":"stimulation of mature B cell apoptosis","type":"narrow"},{"name":"up regulation of mature B cell apoptosis","type":"exact"},{"name":"up-regulation of mature B cell apoptosis","type":"exact"},{"name":"upregulation of mature B cell apoptosis","type":"exact"}],"termid":"GO:0002907"}


id: PBO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 ortholog Cpc2","termid":"PBO:0001550"}


id: MONDO:0016149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of merosin (obsolete MONDO:0016149)","secondary_identifiers":["Orphanet:207094"],"termid":"MONDO:0016149","xrefs":{"Monarch":{"xref_id":"0016149"}}}


id: GO:0052645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving F420-0 (5-O-{[(1S)-1-carboxyethoxy](hydroxy)phosphoryl}-1-deoxy-1-(8-hydroxy-2,4-dioxo-2H-pyrimido[4,5-b]quinolin-10(4H)-yl)-D-ribitol), the fragment of coenzyme F420 remaining after formal hydrolytic removal of all of the glutamate residues.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"ribitol phosphate metabolic process","termid":"GO:0052648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"F420-0 metabolic process","synonyms":[{"name":"F(420)-0 metabolic process","type":"exact"},{"name":"F420-0 metabolism","type":"exact"},{"name":"coenzyme F420-0 metabolic process","type":"exact"},{"name":"coenzyme F420-0 metabolism","type":"exact"}],"termid":"GO:0052645"}


id: GO:0005749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain.","definition_xrefs":["GOC:vw","GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (obsolete GO:0005749)","synonyms":[{"name":"mitochondrial fumarate reductase complex","type":"exact"}],"termid":"GO:0005749"}


id: FYPO:0008116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphoglycerate mutase activity is decreased.","definition_xrefs":["PMID:11106417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased phosphoglycerate mutase activity","termid":"FYPO:0008116"}


id: PBO:0055150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2569","termid":"PBO:0055150"}


id: GO:0071674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mononuclear cell migration","termid":"GO:0071674"}


id: FYPO:0005626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light during S phase of the mitotic cell cycle. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","termid":"FYPO:0005299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint response after UV irradiation during S phase","type":"exact"}],"termid":"FYPO:0005626"}


id: PBO:0040522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AZGP1 pseudogene 2","termid":"PBO:0040522"}


id: PBO:0055905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 28","termid":"PBO:0055905"}


id: GO:0018309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a linkage between a protein amino acid and flavin mononucleotide (FMN).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage (obsolete GO:0018309)","termid":"GO:0018309"}


id: SO:1000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that changes the amino acid sequence of the peptide in such a way that it changes the 3D structure of the molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000111 sequence_variant_affecting_3D_structure_of_polypeptide (obsolete SO:1000111)","synonyms":[{"name":"mutation affecting 3D structure of polypeptide","type":"related"},{"name":"mutation causing partially characterised 3D structural change","type":"related"},{"name":"mutation causing uncharacterised 3D structural change","type":"related"},{"name":"sequence variant affecting 3D structure of polypeptide","type":"exact"},{"name":"sequence variant affecting 3D-structure of polypeptide","type":"exact"},{"name":"sequence variant causing partially characterised 3D structural change","type":"exact"},{"name":"sequence variant causing uncharacterised 3D structural change","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_3D_structural_change","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_3D_structural_change","type":"exact"}],"termid":"SO:1000111"}


id: GO:1905604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["GOC:TermGenie","GOC:bc","GO_REF:0000058","PMID:30280653","GOC:aruk","PMID:22524708","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"},{"relation_name":"is_a","term_name":"regulation of blood-brain barrier permeability","termid":"GO:1905603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood-brain barrier permeability","synonyms":[{"name":"down-regulation of BBB permeability","type":"exact"},{"name":"down-regulation of blood-brain barrier permeability","type":"exact"},{"name":"down-regulation of blood/brain barrier permeability","type":"exact"},{"name":"downregulation of BBB permeability","type":"exact"},{"name":"downregulation of blood-brain barrier permeability","type":"exact"},{"name":"downregulation of blood/brain barrier permeability","type":"exact"},{"name":"inhibition of maintenance of permeability of BBB","type":"narrow"},{"name":"inhibition of maintenance of permeability of blood-brain barrier","type":"narrow"},{"name":"negative regulation of BBB permeability","type":"exact"},{"name":"negative regulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905604"}


id: PBO:0003460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAM like protein Hse1","termid":"PBO:0003460"}


id: PBO:0110046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor Mtf2","termid":"PBO:0110046"}


id: PBO:0071909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 48","termid":"PBO:0071909"}


id: PBO:0031539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_two-spore_ascus","termid":"PBO:0031539"}


id: PBO:0049237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM7 antisense RNA 1","termid":"PBO:0049237"}


id: PBO:0029061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers","termid":"PBO:0029061"}


id: GO:0120278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["GOC:krc","PMID:25397684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cerebral blood circulation","termid":"GO:0120276"},{"relation_name":"is_a","term_name":"negative regulation of blood circulation","termid":"GO:1903523"},{"relation_name":"negatively_regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cerebral blood circulation","synonyms":[{"name":"down regulation of cerebral blood circulation","type":"exact"},{"name":"down-regulation of cerebral blood circulation","type":"exact"},{"name":"downregulation of cerebral blood circulation","type":"exact"},{"name":"inhibition of cerebral blood circulation","type":"narrow"},{"name":"negative regulation of cerebrum blood circulation","type":"exact"},{"name":"negative regulation of telencephalon blood circulation","type":"exact"}],"termid":"GO:0120278"}


id: GO:0170013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.","definition_xrefs":["PMID:10839820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"channel complex","termid":"GO:0170013"}


id: PBO:0072269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 7","termid":"PBO:0072269"}


id: PBO:0002649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp3","termid":"PBO:0002649"}


id: MONDO:0018974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus is a group of chronic autoimmune skin diseases characterized by blisters formation on the outer layer of the skin and the mucous membranes. Three clinical forms have been characterized, of which paraneoplastic pemphigus is extremely rare.","definition_xrefs":["Orphanet:63455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"},{"relation_name":"is_a","term_name":"paraneoplastic cutaneous syndrome","termid":"MONDO:0700266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"paraneoplastic pemphigus","secondary_identifiers":["MedDRA:10057056","MEDGEN:798302","icd11.foundation:104197957","UMLS:C1112570","DOID:0080852","GARD:18858","NANDO:1200231","EFO:0008602","ICD10CM:L10.81"],"termid":"MONDO:0018974","xrefs":{"Monarch":{"xref_id":"0018974"}}}


id: PBO:0048437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 1","termid":"PBO:0048437"}


id: PBO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase (predicted)","termid":"PBO:0000761"}


id: GO:0045661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:go_curators","GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myoblast differentiation","termid":"GO:0045661"}


id: MONDO:0011456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the NPHP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 3","secondary_identifiers":["MEDGEN:346809","OMIM:604387","UMLS:C1858392","MESH:C565780","GARD:18179","DOID:0111114"],"synonyms":[{"name":"NPH3","type":"exact"},{"name":"NPHP3","type":"exact"},{"name":"NPHP3 nephronophthisis (disease)","type":"exact"},{"name":"Nph3","type":"related"},{"name":"nephronophthisis (disease) caused by mutation in NPHP3","type":"exact"},{"name":"nephronophthisis 3","type":"exact"},{"name":"nephronophthisis type 3","type":"exact"}],"termid":"MONDO:0011456","xrefs":{"Monarch":{"xref_id":"0011456"}}}


id: PBO:0012231
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant showed a repair profile very similar to that of the rhp51delta single mutant","termid":"PBO:0012231"}


id: GO:0008347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a glial cell, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration","secondary_identifiers":["GO:0043359"],"synonyms":[{"name":"glia cell migration","type":"exact"}],"termid":"GO:0008347"}


id: MONDO:0010807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MYO7A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 2","secondary_identifiers":["MEDGEN:325485","MESH:C564007","OMIM:600060","UMLS:C1838701","DOID:0110477","GARD:22582"],"synonyms":[{"name":"DFNB2","type":"narrow"},{"name":"MYO7A autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 2","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 2","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MYO7A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 2","type":"narrow"},{"name":"deafness, autosomal recessive 2","type":"narrow"},{"name":"deafness, autosomal recessive type 2","type":"narrow"},{"name":"neurosensory nonsyndromic recessive deafness 2","type":"related"}],"termid":"MONDO:0010807","xrefs":{"Monarch":{"xref_id":"0010807"}}}


id: GO:0018466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (1S,2S,4R)-limonene-1,2-diol + DCPIP+ = DCPIPH + H+ + (1S,4R)-1-hydroxy-2-oxolimonene.","definition_xrefs":["UM-BBD_reactionID:r0735"],"gene_count":0,"genotype_count":0,"name":"obsolete limonene-1,2-diol dehydrogenase activity (obsolete GO:0018466)","termid":"GO:0018466"}


id: MONDO:0006952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bilateral retinopathy characterized by neovascularization, scarring, retinal detachment, and eventually blindness. It may be mild or severe. It occurs in babies born prematurely. Causes include oxygen toxicity and hypoxia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FZD4-related exudative vitreoretinopathy","termid":"MONDO:1040041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"retinopathy of prematurity","secondary_identifiers":["ICD9:362.20","Orphanet:90050","NCIT:C34982","DOID:13025","MESH:D012178","EFO:1001158","NORD:1663","SCTID:415297005","GARD:5695","ICD9:362.21","MedDRA:10038933","UMLS:C0035344","MEDGEN:48438","icd11.foundation:947283385"],"synonyms":[{"name":"ROP","type":"exact"},{"name":"Terry syndrome","type":"exact"},{"name":"premature retinopathy","type":"exact"},{"name":"retrolental fibroplasia","type":"exact"}],"termid":"MONDO:0006952","xrefs":{"Monarch":{"xref_id":"0006952"}}}


id: SO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the 5' UTR of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_5UTR_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"ANNOVAR:ncRNA_UTR5","type":"exact"},{"name":"incomplete transcript 5UTR variant","type":"exact"}],"termid":"SO:0002077"}


id: MONDO:0002983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuromuscular junction disease (obsolete MONDO:0002983)","termid":"MONDO:0002983","xrefs":{"Monarch":{"xref_id":"0002983"}}}


id: FYPO:0003372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during one or both meiotic nuclear divisions. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during meiotic cell cycle","termid":"FYPO:0006975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during meiosis","synonyms":[{"name":"RNA absent from cell during meiotic nuclear division","type":"exact"},{"name":"transcripts absent from cell during meiosis","type":"exact"},{"name":"undetectable cellular RNA level during meiosis","type":"exact"}],"termid":"FYPO:0003372"}


id: FYPO:0000845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is abnormal. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein degradation during vegetative growth","synonyms":[{"name":"abnormal protein breakdown during vegetative growth","type":"exact"},{"name":"abnormal protein catabolic process during vegetative growth","type":"exact"},{"name":"abnormal protein catabolism during vegetative growth","type":"exact"},{"name":"abnormal protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000845"}


id: PBO:0054455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1852","termid":"PBO:0054455"}


id: GO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor recycling","termid":"GO:0001919"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"positively_regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor recycling","synonyms":[{"name":"activation of receptor recycling","type":"narrow"},{"name":"stimulation of receptor recycling","type":"narrow"},{"name":"up regulation of receptor recycling","type":"exact"},{"name":"up-regulation of receptor recycling","type":"exact"},{"name":"upregulation of receptor recycling","type":"exact"}],"termid":"GO:0001921"}


id: FYPO:0001838
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119071,119075],"is_not":false,"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001838","terms_by_termid":{"FYPO:0001838":null}}


id: PBO:0015705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial acylglycerol lipase (predicted)","termid":"PBO:0015705"}


id: PBO:0053048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 6, translational regulator","termid":"PBO:0053048"}


id: GO:0010084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the polarity of an animal organ axis is specified.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ axis polarity","termid":"GO:0010084"}


id: PATO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's surface becoming more extended in a plane.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curvature","termid":"PATO:0001591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flattened","synonyms":[{"name":"compressed","type":"related"}],"termid":"PATO:0002254"}


id: MONDO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatitis that is characterized by the presence of granulomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"granulomatous hepatitis","secondary_identifiers":["SCTID:86514004","UMLS:C0235369","DOID:2239","NCIT:C27015","MEDGEN:115987"],"termid":"MONDO:0002252","xrefs":{"Monarch":{"xref_id":"0002252"}}}


id: MONDO:0015136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to a genetic complement cascade protein anomaly (obsolete MONDO:0015136)","secondary_identifiers":["icd11.foundation:1222145690","Orphanet:101992"],"synonyms":[{"name":"immunodeficiency due to a complement cascade protein anomaly","type":"related"}],"termid":"MONDO:0015136","xrefs":{"Monarch":{"xref_id":"0015136"}}}


id: MONDO:0010782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, lactic acidosis, and sideroblastic anemia","termid":"MONDO:0000863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005570","MONDO:0002280","MONDO:0005336"],"is_obsolete":false,"name":"myopathy, lactic acidosis, and sideroblastic anemia 3","secondary_identifiers":["UMLS:C4225415","DOID:0111184","OMIM:500011","GARD:15312","MEDGEN:903059"],"synonyms":[{"name":"MLASA3","type":"related"},{"name":"myopathy, lactic acidosis, and sideroblastic anaemia type 3","type":"exact"},{"name":"myopathy, lactic acidosis, and sideroblastic anemia 3","type":"exact"},{"name":"myopathy, lactic acidosis, and sideroblastic anemia type 3","type":"exact"}],"termid":"MONDO:0010782","xrefs":{"Monarch":{"xref_id":"0010782"}}}


id: PBO:0070384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal outer segment membrane protein 1","termid":"PBO:0070384"}


id: MONDO:0021462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal neoplasm","termid":"MONDO:0002165"},{"relation_name":"is_a","term_name":"benign neoplasm of large intestine","termid":"MONDO:0021444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of rectum","secondary_identifiers":["ICD10CM:D12.8","MEDGEN:99222","icd11.foundation:1805730142","NCIT:C4774","UMLS:C0496867","SCTID:92318000"],"synonyms":[{"name":"benign neoplasm of the rectum","type":"exact"},{"name":"benign rectal neoplasm","type":"exact"},{"name":"benign rectal neoplasms","type":"exact"},{"name":"benign rectal tumor","type":"exact"},{"name":"benign rectal tumors","type":"exact"},{"name":"benign rectal tumour","type":"exact"},{"name":"benign rectal tumours","type":"exact"},{"name":"benign tumor of rectum","type":"exact"},{"name":"benign tumor of the rectum","type":"exact"},{"name":"benign tumour of rectum","type":"exact"},{"name":"benign tumour of the rectum","type":"exact"},{"name":"rectal neoplasms, benign","type":"exact"},{"name":"rectal tumors, benign","type":"exact"},{"name":"rectum benign neoplasm","type":"exact"}],"termid":"MONDO:0021462","xrefs":{"Monarch":{"xref_id":"0021462"}}}


id: GO:0009188
data:
  {"annotated_genes":["SJAG_02038","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[80182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[80181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ribonucleoside diphosphate anabolism","type":"exact"},{"name":"ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"ribonucleoside diphosphate formation","type":"exact"},{"name":"ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009188","terms_by_termid":{"GO:0006172":null,"GO:0006225":null,"GO:0046705":null}}


id: FYPO:0005589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular phosphatidylserine level","synonyms":[{"name":"normal cellular PS level","type":"exact"},{"name":"normal cellular phosphatidylserine accumulation","type":"related"},{"name":"normal cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylserine level during vegetative growth","type":"exact"}],"termid":"FYPO:0005589"}


id: PBO:0049857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0049857"}


id: PBO:0084344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lanosterol synthase; an essential enzyme that catalyzes the cyclization of squalene 2,3-epoxide, a step in ergosterol biosynthesis; human LSS functionally complements the lethality of the erg7 null mutation","termid":"PBO:0084344"}


id: FYPO:0003729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nuclear periphery is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nuclear periphery","synonyms":[{"name":"ectopic protein localization to nuclear periphery","type":"exact"},{"name":"protein mislocalised to nuclear periphery","type":"exact"},{"name":"protein mislocalised to nuclear periphery during vegetative growth","type":"exact"},{"name":"protein mislocalized to nuclear periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003729"}


id: PBO:0000853
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.100","termid":"PBO:0000853"}


id: PR:C6Y4C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet117 gene.","definition_xrefs":["UniProtKB:C6Y4C1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pet117, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.25","synonyms":[{"name":"Spom972h-pet117","type":"exact"}],"termid":"PR:C6Y4C1"}


id: MONDO:0850230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urticaria that is characterized by the presence of urticaria for a period exceeding 6 weeks, assuming symptoms for most days of the week.","definition_xrefs":["DOID:0080747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chronic urticaria","secondary_identifiers":["UMLS:C0263338","icd11.foundation:901000137","MEDGEN:537829"],"termid":"MONDO:0850230","xrefs":{"Monarch":{"xref_id":"0850230"}}}


id: FYECO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which an echinocandin class of drug was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ echinocandin","termid":"FYECO:0000391"}


id: PBO:0088853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane TRP-like calcium ion channel Trp1322","termid":"PBO:0088853"}


id: PBO:0056482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 4","termid":"PBO:0056482"}


id: PR:O74790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutaredoxin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.06","secondary_identifiers":["UniProtKB:O74790"],"synonyms":[{"name":"Spom972h-GLRX3","type":"exact"}],"termid":"PR:O74790"}


id: PBO:0083845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome core complex catalytic subunit; has both endonuclease and 3'-5' exonuclease activity; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; role in degradation of tRNAs; similar to E. coli RNase R and to human DIS3, which partially complements dis3-81 heat sensitivity; mutations in Dis3p analogous to human mutations implicated in multiple myeloma impair exosome function; protein abundance increases under to DNA replication stress","termid":"PBO:0083845"}


id: PBO:0070645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 16","termid":"PBO:0070645"}


id: PBO:0034348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-connected_to","termid":"PBO:0034348"}


id: PBO:0085800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains sequence that closely resembles a J domain (typified by the E. coli DnaJ protein)","termid":"PBO:0085800"}


id: GO:0043059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the speed, mechanical force, or rhythm of the anterior movement of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"regulates","term_name":"forward locomotion","termid":"GO:0043056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of forward locomotion","termid":"GO:0043059"}


id: PBO:0068559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 10, pseudogene","termid":"PBO:0068559"}


id: FYPO:0004550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein phosphorylation during cellular response to HU","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004550"}


id: GO:0060384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a nerve invades a tissue and makes functional synaptic connection within the tissue.","definition_xrefs":["GOC:sart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innervation","termid":"GO:0060384"}


id: GO:0035434
data:
  {"annotated_genes":["SJAG_02399","SJAG_04246","SJAG_03079","SJAG_00547","SJAG_01493","SJAG_01119","SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61744,103574,104413],"is_not":false,"summary":null,"term":"GO:0035434"},{"annotations":[107652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[87686,114395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[101272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"}]},"cv_name":"biological_process","definition":"The directed movement of copper cation across a membrane.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00547":null,"SJAG_01119":null,"SJAG_01493":null,"SJAG_02399":null,"SJAG_03079":null,"SJAG_04246":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"copper ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1901473"],"synonyms":[{"name":"copper cation transmembrane transport","type":"exact"},{"name":"copper ion membrane transport","type":"exact"}],"termid":"GO:0035434","terms_by_termid":{"GO:0035434":null,"GO:0060003":null,"GO:0097430":null,"GO:0098705":null}}


id: PBO:0078164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 41","termid":"PBO:0078164"}


id: GO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete death receptor interacting protein activity (obsolete GO:0005038)","synonyms":[{"name":"death receptor interacting protein activity","type":"exact"}],"termid":"GO:0005038"}


id: PBO:0081690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 611","termid":"PBO:0081690"}


id: MONDO:0011061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choreatic disease","termid":"MONDO:0001595"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea, remitting, with nystagmus and cataract","secondary_identifiers":["OMIM:601372","MESH:C535355","UMLS:C1832422","MEDGEN:330463"],"synonyms":[{"name":"chorea, remitting with nystagmus and cataracts","type":"related"},{"name":"chorea, remitting, with nystagmus and cataract","type":"exact"},{"name":"familial remitting chorea, nystagmus and cataracts","type":"related"}],"termid":"MONDO:0011061","xrefs":{"Monarch":{"xref_id":"0011061"}}}


id: MOD:00523
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc2dHex1Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)dHex(1)Pent(1)","type":"related"},{"name":"Hex1HexNAc2dHex1Pent1","type":"related"}],"termid":"MOD:00523"}


id: GO:0018186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme to peroxidase.","definition_xrefs":["RESID:AA0279","RESID:AA0280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"peroxidase-heme linkage","synonyms":[{"name":"peroxidase-haem linkage","type":"exact"}],"termid":"GO:0018186"}


id: MONDO:1012081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, bighorn sheep","secondary_identifiers":["OMIA:000393-37174"],"termid":"MONDO:1012081","xrefs":{"Monarch":{"xref_id":"1012081"}}}


id: PBO:0003730
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stability regulated by oxygen","termid":"PBO:0003730"}


id: MONDO:1030015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A porphyria disorder that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"porphyria","termid":"MONDO:0037939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acquired porphyria","secondary_identifiers":["NCIT:C97096","UMLS:C0948592","MEDGEN:1853291","MESH:D011164"],"termid":"MONDO:1030015","xrefs":{"Monarch":{"xref_id":"1030015"}}}


id: PR:O14161
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf21 gene.","definition_xrefs":["UniProtKB:O14161","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.09c","synonyms":[{"name":"Spom972h-cwf21","type":"exact"},{"name":"complexed with cdc5 protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14161"}


id: PBO:0091559
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"social distancing gene","termid":"PBO:0091559"}


id: PBO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4196 and DUF4211, human CCDC82 ortholog","termid":"PBO:0090134"}


id: PBO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein","termid":"PBO:0004987"}


id: GO:1905668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to endosome.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000058","PMID:22732145","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to endosome","termid":"GO:1905666"},{"relation_name":"positively_regulates","term_name":"protein localization to endosome","termid":"GO:0036010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to endosome","synonyms":[{"name":"activation of protein localisation in endosome","type":"narrow"},{"name":"activation of protein localization in endosome","type":"narrow"},{"name":"activation of protein localization to endosome","type":"narrow"},{"name":"positive regulation of protein localisation in endosome","type":"exact"},{"name":"positive regulation of protein localization in endosome","type":"exact"},{"name":"up regulation of protein localisation in endosome","type":"exact"},{"name":"up regulation of protein localization in endosome","type":"exact"},{"name":"up regulation of protein localization to endosome","type":"exact"},{"name":"up-regulation of protein localisation in endosome","type":"exact"},{"name":"up-regulation of protein localization in endosome","type":"exact"},{"name":"up-regulation of protein localization to endosome","type":"exact"},{"name":"upregulation of protein localisation in endosome","type":"exact"},{"name":"upregulation of protein localization in endosome","type":"exact"},{"name":"upregulation of protein localization to endosome","type":"exact"}],"termid":"GO:1905668"}


id: FYPO:0001501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to brefeldin A. Cells stop growing (and may die) at a concentration of brefeldin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to brefeldin A","synonyms":[{"name":"hypersensitive to brefeldin A","type":"exact"},{"name":"sensitive to BFA","type":"exact"},{"name":"sensitive to brefeldin A during mitotic cell cycle","type":"related"},{"name":"sensitive to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0001501"}


id: PBO:0068827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 65, pseudogene","termid":"PBO:0068827"}


id: GO:0140202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a polyamine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:17218313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"polyamine import across plasma membrane","termid":"GO:0140202"}


id: PBO:0012294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation impaired","termid":"PBO:0012294"}


id: PBO:0011099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper membrane transporter, meiotic Mfc1","termid":"PBO:0011099"}


id: GO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"immunoglobulin production","secondary_identifiers":["GO:0002378","GO:0048305"],"synonyms":[{"name":"antibody production","type":"exact"},{"name":"immunoglobulin biosynthetic process","type":"narrow"},{"name":"immunoglobulin secretion","type":"narrow"}],"termid":"GO:0002377"}


id: GO:0070735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycine + L-glutamyl-[protein] = ADP + glycyl-L-glutamyl-[protein] + H+ + phosphate.","definition_xrefs":["RHEA:67180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-glycine ligase activity","secondary_identifiers":["Reactome:R-HSA-8867370"],"synonyms":[{"name":"protein glycylase activity","type":"exact"}],"termid":"GO:0070735"}


id: PBO:0049171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAPL long non-coding downstream RNA","termid":"PBO:0049171"}


id: GO:2000674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000674"}


id: GO:0030522
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a receptor located within a cell.","definition_xrefs":["GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intracellular receptor signaling pathway","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-9024446"],"synonyms":[{"name":"intracellular receptor mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signalling pathway","type":"exact"}],"termid":"GO:0030522","terms_by_termid":{"GO:0009785":null}}


id: PBO:0080134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP associated protein B and C","termid":"PBO:0080134"}


id: GO:0060895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to the dorsal ventral patterning of the spinal cord.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in spinal cord dorsal/ventral patterning (obsolete GO:0060895)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in spinal cord dorsal/ventral patterning","type":"exact"}],"termid":"GO:0060895"}


id: MONDO:0009924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypocalcemic vitamin D-dependent rickets (VDDR-I) is an early-onset hereditary vitamin D metabolism disorder characterized by severe hypocalcemia leading to osteomalacia and rachitic bone deformations, and moderate hypophosphatemia.","definition_xrefs":["Orphanet:289157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcemic rickets","termid":"MONDO:0017323"},{"relation_name":"is_a","term_name":"vitamin D-dependent rickets","termid":"MONDO:0024299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin D-dependent rickets, type 1","secondary_identifiers":["icd11.foundation:1270705227","NCIT:C131073","MESH:C562688","NANDO:1200782","SCTID:67049004","UMLS:C0268689","MEDGEN:124344","GARD:17319"],"synonyms":[{"name":"1 Alpha-hydroxylase deficiency","type":"exact"},{"name":"1-alpha-hydroxylase deficiency","type":"exact"},{"name":"PDDRI","type":"exact"},{"name":"VDDI","type":"exact"},{"name":"VDDR-I","type":"exact"},{"name":"VDDR1","type":"exact"},{"name":"hypocalcemic vitamin D-dependent rickets","type":"exact"},{"name":"pseudo vitamin-D deficient rickets","type":"exact"},{"name":"pseudovitamin D-deficient rickets","type":"exact"},{"name":"selective 1-alpha, 25-hydroxyvitamin D3 deficiency","type":"exact"},{"name":"vitamin D 1 Alpha-Hydroxylase deficiency","type":"exact"},{"name":"vitamin D dependency, type 1","type":"related"},{"name":"vitamin D dependent rickets type I","type":"exact"},{"name":"vitamin D-dependency type I","type":"exact"},{"name":"vitamin D-dependent rickets type 1","type":"exact"}],"termid":"MONDO:0009924","xrefs":{"Monarch":{"xref_id":"0009924"}}}


