# terms

id: GO:0017149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein biosynthetic process inhibitor activity (obsolete GO:0017149)","synonyms":[{"name":"protein anabolism inhibitor activity","type":"exact"},{"name":"protein biosynthetic process inhibitor activity","type":"exact"},{"name":"protein formation inhibitor activity","type":"exact"},{"name":"protein synthesis inhibitor activity","type":"exact"}],"termid":"GO:0017149"}


id: PBO:0074271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 12 like","termid":"PBO:0074271"}


id: GO:0008826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfinoalanine = L-alanine + sulfite.","definition_xrefs":["RHEA:28278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"cysteine sulfinate desulfinase activity","secondary_identifiers":["MetaCyc:RXN0-279"],"synonyms":[{"name":"cysteine sulphinate desulphinase activity","type":"exact"}],"termid":"GO:0008826"}


id: MONDO:0017045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroectodermal-endocrine syndrome is characterized by a combination of endocrine and neuroectodermal abnormalities, including low growth hormone levels, delayed puberty, type II diabetes mellitus, mild intellectual deficit, sensorineural deafness, characteristic facial appearance and alopecia. It has been described in four sibs from Myanmar.","definition_xrefs":["Orphanet:2676"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroectodermal-endocrine syndrome","secondary_identifiers":["SCTID:724090001","GARD:3959"],"synonyms":[{"name":"Oerter-Friedman-Anderson syndrome","type":"exact"},{"name":"neuroectodermal endocrine syndrome","type":"related"}],"termid":"MONDO:0017045","xrefs":{"Monarch":{"xref_id":"0017045"}}}


id: GO:0072207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelium in the metanephros over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney epithelium development","termid":"GO:0072073"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric epithelium development","termid":"GO:0072207"}


id: FYPO:0004337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to mitochondrion","synonyms":[{"name":"abolished protein localisation to mitochondrion","type":"exact"},{"name":"abolished protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"protein absent from mitochondrion","type":"related"},{"name":"protein localization to mitochondrion abolished","type":"exact"},{"name":"protein localization to mitochondrion abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004337"}


id: PBO:0075782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF6 pseudogene 2","termid":"PBO:0075782"}


id: GO:0098765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A meiotic cell cycle phase that occurs after meiosis I (the first meiotic nuclear division).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiosis II cell cycle phase","termid":"GO:0098765"}


id: PBO:0048080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 1","termid":"PBO:0048080"}


id: GO:0047036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: codeine + NADP+ = codeinone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.247","RHEA:19209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"codeinone reductase (NADPH) activity","secondary_identifiers":["KEGG_REACTION:R05124","MetaCyc:1.1.1.247-RXN"],"synonyms":[{"name":"codeine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047036"}


id: MONDO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electrocardiographic finding of an injury in leads corresponding to the anatomic region of the posterolateral wall of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"posterolateral myocardial infarction","secondary_identifiers":["DOID:5851","MEDGEN:207274","UMLS:C1112662"],"termid":"MONDO:0003675","xrefs":{"Monarch":{"xref_id":"0003675"}}}


id: PBO:0040511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 1B","termid":"PBO:0040511"}


id: GO:0009007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA adenine = S-adenosyl-L-homocysteine + DNA 6-methylaminopurine.","definition_xrefs":["EC:2.1.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"site-specific DNA-methyltransferase (adenine-specific) activity","secondary_identifiers":["MetaCyc:2.1.1.72-RXN","RHEA:15197"],"synonyms":[{"name":"DNA adenine methylase","type":"broad"},{"name":"EcoRI methylase","type":"narrow"},{"name":"N-6 adenine-specific DNA methylase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"}],"termid":"GO:0009007"}


id: PBO:0090574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L60","termid":"PBO:0090574"}


id: PBO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp2","termid":"PBO:0001115"}


id: PBO:0039144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2 pseudogene 1","termid":"PBO:0039144"}


id: MOD:00458
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(2)H labeled succinyl group.","definition_xrefs":["Unimod:65#N-term","PubMed:11857757","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(2)H labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:00458"}


id: MONDO:0043251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, slow growing, and painless hamartomatous tumor occurring in tooth-bearing areas of the jaws. According to the presence or absence of tooth-like structures, it is classified as complex type or compound type. Odontoma of complex type is characterized by the presence of enamel and dentin and the absence of tooth-like structures. It is treated with local excision. If it is incompletely removed, it may recur. Odontoma of compound type is characterized by the presence of tooth-like structures. It is treated by local excision. Recurrences have not been reported.","definition_xrefs":["NCIT:C3287"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontoma","secondary_identifiers":["UMLS:C0028882","ICDO:9280/0","MEDGEN:45181","MESH:D009810"],"synonyms":[{"name":"ameloblastic fibro-odontoma","type":"related"},{"name":"ameloblastic fibro-odontomas","type":"related"},{"name":"compound odontoma","type":"related"},{"name":"compound odontomas","type":"related"},{"name":"fibro odontoma","type":"related"},{"name":"fibro odontoma, ameloblastic","type":"related"},{"name":"fibro-odontoma","type":"exact"},{"name":"fibro-odontoma, ameloblastic","type":"related"},{"name":"fibro-odontomas","type":"related"},{"name":"fibro-odontomas, ameloblastic","type":"related"},{"name":"fibroodontoma","type":"exact"},{"name":"fibroodontomas","type":"related"},{"name":"odontoma","type":"exact"},{"name":"odontoma, benign","type":"exact"},{"name":"odontoma, compound","type":"related"},{"name":"odontomas","type":"related"},{"name":"odontomas, compound","type":"related"}],"termid":"MONDO:0043251","xrefs":{"Monarch":{"xref_id":"0043251"}}}


id: GO:0110113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA","PMID:27365390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lipid transporter activity","termid":"GO:0110113"}


id: MONDO:0956983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic pleomorphic xanthoastrocytoma that has material basis in BRAF mutations.","definition_xrefs":["DOID:0080881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic pleomorphic xanthoastrocytoma","termid":"MONDO:0850312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic xanthoastrocytoma BRAF mutant","termid":"MONDO:0956983","xrefs":{"Monarch":{"xref_id":"0956983"}}}


id: FYPO:0007748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of spindle assembly during meiosis I is longer than normal. The total duration of spindle phases I (initial assembly and first stage of elongation) and II (in which elongation normally pauses, and which coincides with metaphase I) is increased due to prolongation of either or both phases.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of spindle assembly during meiosis I","synonyms":[{"name":"increased duration of meiosis I spindle assembly","type":"exact"},{"name":"increased duration of meiosis I spindle formation","type":"exact"},{"name":"increased duration of meiotic spindle assembly during meiosis I","type":"exact"},{"name":"increased duration of meiotic spindle formation during meiosis I","type":"exact"},{"name":"increased duration of spindle assembly phase I and II during meiosis I","type":"exact"},{"name":"prolonged meiosis I spindle assembly","type":"exact"},{"name":"prolonged meiosis I spindle formation","type":"exact"},{"name":"prolonged meiosis I spindle formation phase I and II","type":"exact"},{"name":"prolonged meiosis I spindle phase I and II","type":"exact"},{"name":"prolonged meiotic spindle assembly during meiosis I","type":"exact"},{"name":"prolonged meiotic spindle formation during meiosis I","type":"exact"}],"termid":"FYPO:0007748"}


id: MONDO:0009254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fucosidosis is an extremely rare lysosomal storage disorder characterized by a highly variable phenotype with common manifestations including neurologic deterioration, coarse facial features, growth retardation, and recurrent sinopulmonary infections, as well as seizures, visceromegaly, angiokeratoma and dysostosis.","definition_xrefs":["Orphanet:349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0037792"],"is_obsolete":false,"name":"fucosidosis","secondary_identifiers":["SCTID:64716005","UMLS:C0016788","MEDGEN:5288","ICD9:271.8","NORD:1168","NANDO:2200553","icd11.foundation:1470242510","MESH:D005645","GARD:6473","NANDO:1200130","NCIT:C61274","DOID:14500","OMIM:230000"],"synonyms":[{"name":"A-fucosidase deficiency","type":"exact"},{"name":"Alpha-L-fucosidase deficiency","type":"exact"},{"name":"alpha fucosidase deficiency","type":"exact"},{"name":"fucosidosis","type":"exact"},{"name":"lysosomal storage disease caused by defective alpha-L-fucosidase with accumulation of fucose in the tissues","type":"related"}],"termid":"MONDO:0009254","xrefs":{"Monarch":{"xref_id":"0009254"}}}


id: MONDO:0015676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperandrogenism due to cortisone reductase deficiency (obsolete MONDO:0015676)","termid":"MONDO:0015676","xrefs":{"Monarch":{"xref_id":"0015676"}}}


id: PBO:0089010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion protein Ugo1","termid":"PBO:0089010"}


id: MONDO:0019156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angioosteohypotrophic syndrome is a rare, congenital, vascular anomaly syndrome characterized by venous or, on occasion, arterial malformations which lead to soft tissue hypertrophy and bone hypoplasia. Affected limb is generally shortened, highly deformed, painful and edematous and associates bone and muscle hypotrophy. Single parts, or multiple small parts, of limbs are typically affected but more extensive involvement, including complete extremity, shoulder girdle and axilla, has been reported.","definition_xrefs":["Orphanet:75508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"angioosteohypotrophic syndrome","secondary_identifiers":["MEDGEN:1641209","GARD:18927","SCTID:765750001","UMLS:C4707561"],"synonyms":[{"name":"Phlebectatic osteohypoplastic angiodysplasia","type":"exact"},{"name":"Servelle-Martorell syndrome","type":"exact"}],"termid":"MONDO:0019156","xrefs":{"Monarch":{"xref_id":"0019156"}}}


id: MONDO:0018084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Uhl anomaly is characterized by an almost complete absence of the myocardium in the right ventricle resulting in a thin walled nonfunctional right ventricle manifesting with cardiac arrhythmias and right ventricular failure. Cases of partial absence of right ventricular myocardium which remains asymptomatic or mildly symptomatic until adulthood have also been reported. Patients presenting with complete Uhl anomaly should be considered for cardiac transplantation.","definition_xrefs":["Orphanet:3403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Uhl anomaly","secondary_identifiers":["MedDRA:10048951","MEDGEN:78576","UMLS:C0265857","GARD:5393","MESH:C536932"],"synonyms":[{"name":"Uhl's anomaly","type":"related"},{"name":"parchment right ventricle","type":"related"}],"termid":"MONDO:0018084","xrefs":{"Monarch":{"xref_id":"0018084"}}}


id: GO:0018044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-leucine amide by hydrolysis and oxidation of an interior Leu-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0091"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-leucine amidation (obsolete GO:0018044)","termid":"GO:0018044"}


id: GO:0038202
data:
  {"annotated_genes":["SJAG_03928","SJAG_02723","SJAG_01047","SJAG_02765","SJAG_01184","SJAG_03799","SJAG_03089","SJAG_00167","SJAG_04496","SJAG_00561","SJAG_04235","SJAG_03709","SJAG_04910","SJAG_00169","SJAG_03371","SJAG_01983","SJAG_00688","SJAG_03501","SJAG_01142","SJAG_00991","SJAG_03405","SJAG_01320","SJAG_01509","SJAG_04249","SJAG_03486","SJAG_01703","SJAG_02231","SJAG_00875","SJAG_03678","SJAG_03072","SJAG_04394","SJAG_01032","SJAG_01187","SJAG_05346","SJAG_02424","SJAG_03355","SJAG_00824","SJAG_00457","SJAG_02605","SJAG_00209","SJAG_05184","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75232,79352,91847,92975,98341,106458,106483,112826,114732],"is_not":false,"summary":null,"term":"GO:0038202"},{"annotations":[98661,102799,116851,73302,109069,118040,95860,104929,114384,116292,73273,106950,112963,99360,93089,87768,79706,115938,101239,109474,113780],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904262"},{"annotations":[75015,94079,112663,88056,75602,72182,76155,95861,76533,110337,73759],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904263"},{"annotations":[92651,107649,117609,93813,115288],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"A series of intracellular molecular signals mediated by TORC1; TOR (target of rapamycin) in complex with at least Raptor (regulatory-associated protein of TOR), or orthologs of, and other signaling components.","definition_xrefs":["GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00167":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01047":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02426":null,"SJAG_02605":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03709":null,"SJAG_03799":null,"SJAG_03928":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04394":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TORC1 signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TORC1 signal transduction","type":"exact"}],"termid":"GO:0038202","terms_by_termid":{"GO:0038202":null,"GO:1903432":null,"GO:1904262":null,"GO:1904263":null}}


id: MONDO:0018696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corticobasal syndrome (CBS) is a rare neurodegenerative disease characterized by multifaceted motor system dysfunctions and cognitive defects such as asymmetric rigidity, bradykinesia, limb apraxia, and visuospatial dysfunction.","definition_xrefs":["Orphanet:454887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"corticobasal syndrome","secondary_identifiers":["GARD:13168","MEDGEN:1801322","UMLS:C5575119","DOID:0081392"],"termid":"MONDO:0018696","xrefs":{"Monarch":{"xref_id":"0018696"}}}


id: PR:Q10481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19338:SF0","PRO:DNx","OMA:SCHPO01858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.09c","secondary_identifiers":["UniProtKB:Q10481"],"synonyms":[{"name":"Spom972h-TIMM13","type":"exact"}],"termid":"PR:Q10481"}


id: FYPO:0007226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at one or more heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal chromatin silencing at heterochromatin island","synonyms":[{"name":"normal chromatin silencing at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0007226"}


id: SO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recombination product between the 2 LTR of the same element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solo_LTR","synonyms":[{"name":"solo LTR","type":"exact"}],"termid":"SO:0001003"}


id: GO:0043469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of xylose.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"D-xylose catabolic process","termid":"GO:0042843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"regulation of D-xylose catabolic process","termid":"GO:0043469"}


id: MONDO:0003189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the middle ear","direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear carcinoma","termid":"MONDO:0003190"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"middle ear adenocarcinoma","secondary_identifiers":["NCIT:C6848","UMLS:C1334758","DOID:4892","MEDGEN:235326"],"synonyms":[{"name":"adenocarcinoma of middle Ear","type":"exact"},{"name":"adenocarcinoma of middle ear","type":"related"},{"name":"adenocarcinoma of the middle Ear","type":"exact"},{"name":"adenocarcinoma of the middle ear","type":"exact"},{"name":"middle Ear adenocarcinoma","type":"exact"},{"name":"middle ear adenocarcinoma","type":"exact"}],"termid":"MONDO:0003189","xrefs":{"Monarch":{"xref_id":"0003189"}}}


id: PBO:0059014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 1","termid":"PBO:0059014"}


id: GO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which the change in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","termid":"GO:0001978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"}


id: PBO:0058153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4448","termid":"PBO:0058153"}


id: MONDO:0014756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any essential tremor in which the cause of the disease is a mutation in the TENM4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 5","secondary_identifiers":["MEDGEN:897748","DOID:0111432","UMLS:C4225223","OMIM:616736"],"synonyms":[{"name":"ETM5","type":"exact"},{"name":"TENM4 essential tremor","type":"exact"},{"name":"essential tremor caused by mutation in TENM4","type":"exact"},{"name":"essential tremor, hereditary, 5","type":"exact"},{"name":"tremor, hereditary essential, 5","type":"exact"},{"name":"tremor, hereditary essential, 5; ETM5","type":"exact"},{"name":"tremor, hereditary essential, type 5","type":"exact"}],"termid":"MONDO:0014756","xrefs":{"Monarch":{"xref_id":"0014756"}}}


id: MONDO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A senile cataract that involves the lens nucleus.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"nuclear cataract","termid":"MONDO:0045050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nuclear senile cataract","secondary_identifiers":["ICD9:366.16","UMLS:C0271166","SCTID:193589009","DOID:13963","MEDGEN:543204"],"synonyms":[{"name":"Senile nuclear cataract","type":"exact"},{"name":"Senile nuclear sclerosis","type":"exact"},{"name":"lens nucleus senile cataract","type":"exact"},{"name":"senile cataract of lens nucleus","type":"exact"}],"termid":"MONDO:0001847","xrefs":{"Monarch":{"xref_id":"0001847"}}}


id: PATO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer by virtue of the cessation of the bearer's life.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dead","termid":"PATO:0001422"}


id: GO:0035805
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized extracellular matrix that surrounds the plasma membrane of the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.","definition_xrefs":["PMID:17163408","PMID:16944418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"egg coat","synonyms":[{"name":"vitelline membrane","type":"narrow"},{"name":"zona pellucida","type":"narrow"}],"termid":"GO:0035805"}


id: PBO:0081151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP91 zinc finger protein, atypical E3 ubiquitin ligase","termid":"PBO:0081151"}


id: GO:0035779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an angioblast cell. Angioblasts are one of the two products formed from hemangioblast cells (the other being pluripotent hemopoietic stem cells).","definition_xrefs":["CL:0000566","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell differentiation","synonyms":[{"name":"angioblastic mesenchymal cell differentiation","type":"exact"}],"termid":"GO:0035779"}


id: GO:0051210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size uniformly in all directions. In general, a rounded cell morphology reflects isotropic cell growth.","definition_xrefs":["GOC:ai","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isotropic cell growth","synonyms":[{"name":"uniform cell growth","type":"related"}],"termid":"GO:0051210"}


id: GO:1902666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a protein is transported to, or maintained in, a location within a Mmi1 nuclear focus complex.","definition_xrefs":["PMID:23980030","GOC:TermGenie","GO_REF:0000087"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to Mmi1 nuclear focus complex (obsolete GO:1902666)","synonyms":[{"name":"protein localisation in Mmi1 nuclear focus complex","type":"exact"},{"name":"protein localisation to Mmi1 nuclear focus complex","type":"exact"},{"name":"protein localization in Mmi1 nuclear focus complex","type":"exact"}],"termid":"GO:1902666"}


id: PBO:0091222
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoLipase B homolog","termid":"PBO:0091222"}


id: GO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-2 complex","synonyms":[{"name":"laminin-211 complex","type":"exact"}],"termid":"GO:0005607"}


id: GO:0046536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein or protein-RNA complex that localizes to one or more of the sex chromosome(s), where it acts to normalize transcription between different sexes.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"},{"relation_name":"part_of","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"dosage compensation complex","termid":"GO:0046536"}


id: GO:0045902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the ability of the translational apparatus to interpret the genetic code.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"},{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational fidelity","synonyms":[{"name":"down regulation of translational fidelity","type":"exact"},{"name":"down-regulation of translational fidelity","type":"exact"},{"name":"downregulation of translational fidelity","type":"exact"},{"name":"inhibition of translational fidelity","type":"narrow"}],"termid":"GO:0045902"}


id: GO:1904009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium glutamate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:20704590"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to monosodium glutamate (obsolete GO:1904009)","termid":"GO:1904009"}


id: GO:0032038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heavy chain of a myosin II complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"},{"relation_name":"is_a","term_name":"myosin II binding","termid":"GO:0045159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"myosin II heavy chain binding","termid":"GO:0032038"}


id: FYPO:0003031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation takes place in cells that are not subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985"],"is_obsolete":false,"name":"mating without nitrogen starvation","synonyms":[{"name":"conjugation without nitrogen starvation","type":"exact"},{"name":"mating in the absence of nitrogen starvation","type":"exact"},{"name":"mating without nitrogen depletion","type":"exact"},{"name":"mating without nitrogen deprivation","type":"exact"}],"termid":"FYPO:0003031"}


id: PBO:0002770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt4","termid":"PBO:0002770"}


id: PBO:0079635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 6","termid":"PBO:0079635"}


id: PBO:0050956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma receptor 2","termid":"PBO:0050956"}


id: PR:Q9UT16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase mitochondrial F1 complex assembly factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00598","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein atp12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.12c","secondary_identifiers":["UniProtKB:Q9UT16"],"synonyms":[{"name":"Spom972h-ATPAF2","type":"exact"}],"termid":"PR:Q9UT16"}


id: FYPO:0005792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell undergoes transition from G0 phase to G2. Cell length is normal.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped cell during recovery from quiescence","termid":"FYPO:0005810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005568","FYPO:0001985","FYPO:0000005","FYPO:0005447"],"is_obsolete":false,"name":"T-shaped cell during G0 to G2 transition","synonyms":[{"name":"T-shaped cell during cell cycle re-entry at G2","type":"exact"},{"name":"T-shaped cell during cell quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during exit from cell quiescence into G2","type":"exact"},{"name":"T-shaped cell during quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during recovery from quiescence following G2 arrest","type":"exact"},{"name":"T-shaped cell during recovery from quiescence into G2","type":"exact"},{"name":"cell morphology, T shaped during G0 to G2 transition","type":"exact"}],"termid":"FYPO:0005792"}


id: PBO:0005027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp72 (predicted)","termid":"PBO:0005027"}


id: PBO:0053756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 997","termid":"PBO:0053756"}


id: PBO:0065671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRS antisense RNA 1","termid":"PBO:0065671"}


id: PBO:0003625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mrd1 (predicted)","termid":"PBO:0003625"}


id: PBO:0054144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1511","termid":"PBO:0054144"}


id: GO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activation of membrane attack complex","synonyms":[{"name":"regulation of MAC assembly","type":"exact"},{"name":"regulation of MAC formation","type":"exact"},{"name":"regulation of activation of MAC","type":"exact"},{"name":"regulation of activation of TCC","type":"narrow"},{"name":"regulation of activation of terminal complement complex","type":"narrow"},{"name":"regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"regulation of membrane attack complex assembly","type":"exact"},{"name":"regulation of membrane attack complex formation","type":"exact"}],"termid":"GO:0001969"}


id: PBO:0078988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (TTA) 1-1","termid":"PBO:0078988"}


id: MONDO:0012075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodontia-cancer predisposition syndrome","secondary_identifiers":["MESH:C563898","GARD:17376","OMIM:608615","MEDGEN:324868","Orphanet:300576","UMLS:C1837750"],"synonyms":[{"name":"ODCRCS","type":"exact"},{"name":"autosomal dominant ectodermal dysplasia-cancer predisposition syndrome","type":"exact"},{"name":"oligodontia-cancer predisposition syndrome","type":"exact"},{"name":"oligodontia-colorectal cancer syndrome","type":"exact"},{"name":"tooth agenesis-colorectal cancer syndrome","type":"exact"}],"termid":"MONDO:0012075","xrefs":{"Monarch":{"xref_id":"0012075"}}}


id: PBO:0056238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI family member, X-linked","termid":"PBO:0056238"}


id: GO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin D receptor activity","synonyms":[{"name":"PGD receptor activity","type":"related"},{"name":"PGD(2) receptor activity","type":"exact"}],"termid":"GO:0004956"}


id: PBO:0082628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of CORVET membrane tethering complex; cytoplasmic protein required for the sorting and processing of soluble vacuolar proteins, acidification of the vacuolar lumen, and assembly of the vacuolar H+-ATPase","termid":"PBO:0082628"}


id: MONDO:0044991
data:
  {"annotated_genes":["SJAG_03106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013662"}]},"cv_name":"mondo","definition":"A disease or disorder that involves the upper digestive tract.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03106":null},"genotype_count":0,"is_obsolete":false,"name":"upper digestive tract disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:712971","UMLS:C1290613","SCTID:119291004"],"synonyms":[{"name":"disease of upper digestive tract","type":"exact"},{"name":"disease or disorder of upper digestive tract","type":"exact"},{"name":"disorder of upper digestive tract","type":"exact"},{"name":"disorder of upper gastrointestinal tract","type":"exact"},{"name":"upper digestive tract disease or disorder","type":"exact"},{"name":"upper gastrointestinal tract disease","type":"exact"}],"termid":"MONDO:0044991","terms_by_termid":{"MONDO:0013662":null},"xrefs":{"Monarch":{"xref_id":"0044991"}}}


id: PBO:0061779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 1","termid":"PBO:0061779"}


id: FYPO:0000858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of heterochromatin is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleosome positioning in heterochromatin","synonyms":[{"name":"normal nucleosome occupancy in heterochromatin","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing in heterochromatin","type":"exact"}],"termid":"FYPO:0000858"}


id: GO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavages between the SSU-rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. These cleavages liberate tRNAs from the polycistronic transcript as well as separating the SSU and LSU containing transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002106"}


id: PBO:0084696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial external NADH dehydrogenase; catalyzes the oxidation of cytosolic NADH; Nde1p and Nde2p are involved in providing the cytosolic NADH to the mitochondrial respiratory chain; NDE2 has a paralog, NDE1, that arose from the whole genome duplication","termid":"PBO:0084696"}


id: PBO:0030483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sodium_export","termid":"PBO:0030483"}


id: PBO:0113207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial fission factor (mitofissin) essential for mitophagy; required for Dmn1p-mediated mitochondrial fission; directly binds to lipid membranes and brings about lipid membrane fragility to facilitate membrane fission; S. pombe homolog complements null mutant","termid":"PBO:0113207"}


id: GO:0110126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of loading solutes into the sieve tube or companion cell of the phloem for long distance transport from source to sink.","definition_xrefs":["PMID:19025382","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem transport","termid":"GO:0010233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phloem loading","termid":"GO:0110126"}


id: GO:0180001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cyclic di-AMP nucleotide.","definition_xrefs":["PMID:32843560","PMID:36629470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cyclic-di-AMP binding","synonyms":[{"name":"cyclic dimeric adenosine monophosphate binding","type":"exact"}],"termid":"GO:0180001"}


id: PBO:0059660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 26","termid":"PBO:0059660"}


id: GO:0031157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:pg","GOC:mah","GOC:mtg_sensu","PMID:4338436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"regulation of aggregation during fruiting body biosynthesis","type":"related"},{"name":"regulation of aggregation during fruiting body formation","type":"related"}],"termid":"GO:0031157"}


id: MONDO:0019506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome is characterized by precocious obesity, congenital hypothyroidism, neonatal colitis, cardiac hypertrophy, craniosynostosis and developmental delay. It has been described in two brothers, one of whom died within the first month of life. The parents of the two children were nonconsanguineous and in good health, however, the pregnancies were complicated by a maternal HELLP syndrome (Haemolysis, Elevated Liver enzymes and Low Platelets). The mode of inheritance has not yet been clearly established.","definition_xrefs":["Orphanet:88643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome","secondary_identifiers":["GARD:19092","UMLS:C4302879","MEDGEN:928548","SCTID:722051004"],"termid":"MONDO:0019506","xrefs":{"Monarch":{"xref_id":"0019506"}}}


id: GO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of sister chromatid cohesion","termid":"GO:0034093"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"positively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034096"}


id: MONDO:0014799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the SIPA1L3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 45","secondary_identifiers":["DOID:0110262","MEDGEN:895198","UMLS:C4225182","OMIM:616851"],"synonyms":[{"name":"CTRCT45","type":"exact"},{"name":"SIPA1L3 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 45","type":"exact"},{"name":"cataract type 45","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in SIPA1L3","type":"exact"}],"termid":"MONDO:0014799","xrefs":{"Monarch":{"xref_id":"0014799"}}}


id: PBO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hook microtubule tethering protein 1","termid":"PBO:0050460"}


id: GO:0004588
data:
  {"annotated_genes":["SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73075],"is_not":false,"summary":null,"term":"GO:0004588"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["EC:2.4.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"orotate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:OROPRIBTRANS-RXN","Reactome:R-HSA-73567","RHEA:10380"],"synonyms":[{"name":"OPRT activity","type":"related"},{"name":"OPRTase activity","type":"related"},{"name":"orotate phosphoribosyl pyrophosphate transferase activity","type":"related"},{"name":"orotic acid phosphoribosyltransferase activity","type":"related"},{"name":"orotidine 5'-monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine phosphoribosyltransferase activity","type":"related"},{"name":"orotidine-5'-phosphate diphosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate:diphosphate phospho-alpha-D-ribosyl-transferase activity","type":"related"},{"name":"orotidylate phosphoribosyltransferase activity","type":"related"},{"name":"orotidylate pyrophosphorylase activity","type":"related"},{"name":"orotidylic acid phosphorylase activity","type":"related"},{"name":"orotidylic acid pyrophosphorylase activity","type":"related"},{"name":"orotidylic phosphorylase activity","type":"related"},{"name":"orotidylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004588","terms_by_termid":{"GO:0004588":null}}


id: PR:Q09813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf111 gene.","definition_xrefs":["UniProtKB:Q09813","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID 111 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.14","synonyms":[{"name":"Spom972h-taf111","type":"exact"},{"name":"TAFII-111 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP-associated factor 111 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09813"}


id: MONDO:0005643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by members of the alphavirus genus of the family togaviridae.","definition_xrefs":["MESH:D018354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Togaviridae infectious disease","termid":"MONDO:0005985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alphavirus infectious disease","secondary_identifiers":["UMLS:C0206752","EFO:0007142","MEDGEN:64650"],"synonyms":[{"name":"Alphavirus caused disease or disorder","type":"exact"},{"name":"Alphavirus disease or disorder","type":"exact"}],"termid":"MONDO:0005643","xrefs":{"Monarch":{"xref_id":"0005643"}}}


id: FYPO:0000015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a daughter cell begins to grow from the lateral portion of the long axis of the cell, and at an angle to the septum or cell division site of the mother cell, resulting in the formation of a single cell that has a branch.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"branched vegetative cell","synonyms":[{"name":"branched cell","type":"exact"},{"name":"branched cell during vegetative growth","type":"exact"},{"name":"branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, branched","type":"exact"}],"termid":"FYPO:0000015"}


id: PBO:0044889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1B","termid":"PBO:0044889"}


id: GO:0032080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of type I restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of type I site-specific deoxyribonuclease activity (obsolete GO:0032080)","synonyms":[{"name":"down regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type I restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type I restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type I restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032080"}


id: PBO:0116748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit B1","termid":"PBO:0116748"}


id: SO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The peptide twists in an anticlockwise, left handed manner. The dihedral angles for this turn are: Residue(i): -140 degrees < chi(1) -120 degrees < -20 degrees, +80 degrees psi +120 degrees < +180 degrees, residue(i+1): +20 degrees < phi < +140 degrees, -40 < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine_threonine_turn","termid":"SO:0001141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"st_turn_left_handed_type_two","secondary_identifiers":["BS:00232"],"synonyms":[{"name":"st turn left handed type two","type":"exact"},{"name":"st_turn_iil","type":"exact"}],"termid":"SO:0001143"}


id: GO:0007471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which the anatomical structures of the first or anterior segment of the insect thorax are generated and organized.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete prothoracic morphogenesis (obsolete GO:0007471)","synonyms":[{"name":"prothoracic morphogenesis","type":"exact"}],"termid":"GO:0007471"}


id: GO:0008275
data:
  {"annotated_genes":["SJAG_07018","SJAG_03835","SJAG_01215","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100768,108643,109398,110372],"is_not":false,"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A complex usually comprising two gamma-tubulin molecules and two conserved non-tubulin proteins. Some gamma-tubulin small complexes are thought to be the repeating unit making up the core of the gamma-tubulin ring complex.","definition_xrefs":["PMID:11297925","PMID:12134075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex","termid":"GO:0000930"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"gamma-tubulin small complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061495","GO:0000928","GO:0000927"],"synonyms":[{"name":"Tub4 complex","type":"narrow"},{"name":"gamma-tubulin small complex, centrosomal","type":"narrow"},{"name":"gamma-tubulin small complex, mitotic spindle pole body","type":"narrow"},{"name":"gamma-tubulin small complex, spindle pole body","type":"narrow"},{"name":"gammaTuSC","type":"exact"}],"termid":"GO:0008275","terms_by_termid":{"GO:0008275":null}}


id: MONDO:0008149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteogenesis imperfecta found in a single South African family.","definition_xrefs":["DOID:0110335","PMID:7241530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta type 1","termid":"MONDO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta with opalescent teeth, blue sclerae and wormian bones but without fractures","secondary_identifiers":["OMIM:166230","GARD:15100","MESH:C563487","UMLS:C1833748","MEDGEN:331579"],"synonyms":[{"name":"osteogenesis imperfecta with opalescent teeth, blue sclerae and WORMIAN bones, but without fractures","type":"related"}],"termid":"MONDO:0008149","xrefs":{"Monarch":{"xref_id":"0008149"}}}


id: PATO:0000693
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000693 late (obsolete PATO:0000693)","termid":"PATO:0000693"}


id: PBO:0073979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 23 member 4, pseudogene","termid":"PBO:0073979"}


id: PBO:0048776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine monophosphate reductase","termid":"PBO:0048776"}


id: SO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Crypton is a superfamily of DNA transposons that use tyrosine recombinase (YR) to cut and rejoin the recombining DNA molecules.","definition_xrefs":["PMID:22011512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crypton_YR_transposon","synonyms":[{"name":"Crypton YR transposon","type":"exact"},{"name":"Crypton transposon","type":"exact"},{"name":"DYC transposon","type":"exact"}],"termid":"SO:0002277"}


id: PBO:0081356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 181","termid":"PBO:0081356"}


id: GO:0045557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAIL receptor biosynthetic process (obsolete GO:0045557)","synonyms":[{"name":"TRAIL receptor anabolism","type":"exact"},{"name":"TRAIL receptor biosynthesis","type":"exact"},{"name":"TRAIL receptor formation","type":"exact"},{"name":"TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045557"}


id: PBO:0111526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 6","termid":"PBO:0111526"}


id: GO:0072553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a terminal button. A terminal button is the terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynapse organization","termid":"GO:0099172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal button organization","synonyms":[{"name":"bouton organization","type":"exact"},{"name":"presynaptic bouton organization","type":"exact"},{"name":"synaptic bouton organization","type":"exact"},{"name":"terminal bouton organization","type":"exact"},{"name":"terminal button organisation","type":"exact"}],"termid":"GO:0072553"}


id: MONDO:0010371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked recessive retinal disease characterized by fundus hypopigmentation, decrased visual acuity, nystagmus, astigmatism, progressive axial myopia, defective dark adaptation and protanopia.","definition_xrefs":["Orphanet:178333"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"CACNA1F-related retinopathy","termid":"MONDO:0700243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Aland island eye disease","secondary_identifiers":["GARD:10574","UMLS:C0268505","OMIM:300600","ICD10CM:H35.5","MEDGEN:120643","MESH:C562664","SCTID:266455006","DOID:0050630"],"synonyms":[{"name":"AIED","type":"exact"},{"name":"ALAND ISLAND eye disease","type":"related"},{"name":"Aland island eye disease","type":"exact"},{"name":"FORSIUS-Eriksson type ocular albinism","type":"exact"},{"name":"Forsius Eriksson type ocular albinism","type":"related"},{"name":"Forsius-Eriksson syndrome","type":"exact"},{"name":"Forsius-Eriksson type ocular albinism","type":"exact"},{"name":"Åland Islands eye disease","type":"related"}],"termid":"MONDO:0010371","xrefs":{"Monarch":{"xref_id":"0010371"}}}


id: PBO:0084644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule effector required for tubulin heterodimer formation; binds alpha-tubulin, required for normal microtubule function, null mutant exhibits cold-sensitive microtubules and sensitivity to benomyl","termid":"PBO:0084644"}


id: GO:0050274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicyl alcohol + UDP-D-glucose = H+ + salicin + UDP.","definition_xrefs":["EC:2.4.1.172","RHEA:11512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"salicyl-alcohol beta-D-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03558","MetaCyc:SALICYL-ALCOHOL-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose:salicyl-alcohol beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:salicyl alcohol phenyl-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:salicyl-alcohol beta-D-glucosyltransferase activity","type":"related"},{"name":"salicyl-alcohol b-D-glucosyltransferase activity","type":"exact"},{"name":"salicyl-alcohol glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-salicyl alcohol 2-glucosyltransferase activity","type":"related"}],"termid":"GO:0050274"}


id: PBO:0075177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 7","termid":"PBO:0075177"}


id: GO:0031916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates synaptic metaplasticity. Metaplasticity is a higher-order form of plasticity and is manifest as a change in the ability to induce subsequent synaptic plasticity that is the ability of synapses to change as circumstances require.","definition_xrefs":["GOC:mah","PMID:8658594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic metaplasticity","termid":"GO:0031916"}


id: GO:0004050
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113763],"is_not":false,"summary":null,"term":"GO:0004050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a ribonucleoside 5'-triphosphate + 2 H2O = a ribonucleoside 5'-phosphate + 2 phosphate. This reaction consists of two distinct successive phosphate-releasing steps, with NDPs as intermediates. Apyrases are active against both di- and triphosphate nucleotides (NDPs and NTPs) and hydrolyze NTPs to nucleotide monophosphates (NMPs).","definition_xrefs":["EC:3.6.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"apyrase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14024","RHEA:36795"],"termid":"GO:0004050","terms_by_termid":{"GO:0004050":null}}


id: PBO:0112752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2, Agm2","termid":"PBO:0112752"}


id: GO:0090562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N,N'-diacetylchitobiose(out) = protein histidine + N,N'-diacetylchitobiose phosphate(in).","definition_xrefs":["GOC:am","PMID:10913119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N,N'-diacetylchitobiose phosphotransferase system transporter activity","termid":"GO:0090562"}


id: MONDO:0012311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylomegaepiphyseal dysplasia with upper limb mesomelia, punctate calcifications, and deafness","secondary_identifiers":["UMLS:C1865022","MESH:C566507","MEDGEN:355893","OMIM:609616"],"synonyms":[{"name":"spondylomegaepiphyseal dysplasia with upper limb mesomelia, punctate calcifications, and deafness","type":"exact"}],"termid":"MONDO:0012311","xrefs":{"Monarch":{"xref_id":"0012311"}}}


id: PATO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of dark orange, red, of very low intensity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Brown"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brown","termid":"PATO:0000952"}


id: PR:O59795
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CUX1 gene translation product that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04331","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein CASP (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.04c","secondary_identifiers":["UniProtKB:O59795"],"synonyms":[{"name":"Spom972h-CUX1","type":"exact"}],"termid":"PR:O59795"}


id: PBO:0055930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37B","termid":"PBO:0055930"}


id: PBO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoadenosine phosphosulfate reductase","termid":"PBO:0001482"}


id: GO:0009691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytokinin biosynthetic process","synonyms":[{"name":"cytokinin anabolism","type":"exact"},{"name":"cytokinin biosynthesis","type":"exact"},{"name":"cytokinin formation","type":"exact"},{"name":"cytokinin synthesis","type":"exact"}],"termid":"GO:0009691"}


id: PBO:0049474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme K","termid":"PBO:0049474"}


id: MONDO:0014055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign adult familial myoclonic epilepsy","termid":"MONDO:0019448"},{"relation_name":"is_a","term_name":"epilepsy, familial adult myoclonic","termid":"MONDO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic, 4","secondary_identifiers":["UMLS:C3554560","DOID:0111693","MEDGEN:767474","OMIM:615127","GARD:18085"],"synonyms":[{"name":"FAME4","type":"exact"},{"name":"cortical myoclonic tremor with epilepsy, familial, 4","type":"related"},{"name":"epilepsy, familial ADULT myoclonic, 4","type":"related"},{"name":"epilepsy, myoclonic, familial adult, 4","type":"exact"}],"termid":"MONDO:0014055","xrefs":{"Monarch":{"xref_id":"0014055"}}}


id: PATO:0002631
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence of a process during which time there is an inability to change the course, extent, or repetition of the process.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refractory","termid":"PATO:0002631"}


id: GO:0050685
data:
  {"annotated_genes":["SJAG_03279","SJAG_02058","SJAG_00996","SJAG_02018","SJAG_01919","SJAG_01040"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118223,89221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[110721,73802,75064,91919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"positive regulation of mRNA metabolic process","termid":"GO:1903313"},{"relation_name":"positively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_03279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of mRNA processing","type":"narrow"},{"name":"stimulation of mRNA processing","type":"narrow"},{"name":"up regulation of mRNA processing","type":"exact"},{"name":"up-regulation of mRNA processing","type":"exact"},{"name":"upregulation of mRNA processing","type":"exact"}],"termid":"GO:0050685","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: PBO:0088578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase Gde1","termid":"PBO:0088578"}


id: MONDO:0016319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"congenital insensitivity to pain with hyperhidrosis","secondary_identifiers":["UMLS:C5679817","GARD:20514","Orphanet:217399","MEDGEN:1830087"],"synonyms":[{"name":"congenital absence of pain with hyperhidrosis","type":"exact"},{"name":"congenital analgesia with hyperhidrosis","type":"exact"},{"name":"congenital indifference to pain with hyperhidrosis","type":"exact"}],"termid":"MONDO:0016319","xrefs":{"Monarch":{"xref_id":"0016319"}}}


id: PR:O43007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade9 gene.","definition_xrefs":["UniProtKB:O43007","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.08","synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade9","type":"exact"}],"termid":"PR:O43007"}


id: RO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship involving a predation process, where the subject kills the target in order to eat it or to feed to siblings, offspring or group members","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preys_on","termid":"RO:0002439"}


id: MONDO:0000908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the CTNNA3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 13","secondary_identifiers":["DOID:0110084","MEDGEN:816468","UMLS:C3810138","OMIM:615616"],"synonyms":[{"name":"ARVC13","type":"exact"},{"name":"ARVD13","type":"exact"},{"name":"CTNNA3 arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 13","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in CTNNA3","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 13","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 13","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 13","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 13","type":"exact"}],"termid":"MONDO:0000908","xrefs":{"Monarch":{"xref_id":"0000908"}}}


id: PBO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17","termid":"PBO:0070891"}


id: PBO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga2","termid":"PBO:0015665"}


id: PBO:0062750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 2","termid":"PBO:0062750"}


id: PBO:0073210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4B","termid":"PBO:0073210"}


id: GO:0160132
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part that is composed of multifold plasma membrane of the epidermis where it is in direct contact with apical extracellular matrix. Meisosome, or multiple eisome is named because of its superficial similarity to yeast eisosome.","definition_xrefs":["PMID:36913486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"meisosome","termid":"GO:0160132"}


id: PBO:0083778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein involved in pre-18S rRNA processing; binds to RNA and stimulates ATPase activity of Dbp8; involved in assembly of the small subunit (SSU) processome","termid":"PBO:0083778"}


id: PBO:0076971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 2","termid":"PBO:0076971"}


id: FYPO:0002800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type). Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein degradation during vegetative growth","synonyms":[{"name":"normal protein breakdown during vegetative growth","type":"exact"},{"name":"normal protein catabolic process during vegetative growth","type":"exact"},{"name":"normal protein catabolism during vegetative growth","type":"exact"},{"name":"normal protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002800"}


id: PBO:0011996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH/NADPH dependent indole-3-acetaldehyde reductase","termid":"PBO:0011996"}


id: GO:0141059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont interferes with a host antimicrobial peptide, for example by cleavage or degradation.","definition_xrefs":["PMID:16242332","PMID:19015361","PMID:21335044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host antimicrobial peptide activity","synonyms":[{"name":"disruption of host antimicrobial peptide activity","type":"exact"}],"termid":"GO:0141059"}


id: FYPO:0002971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during telophase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during telophase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during telophase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during telophase","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic telophase","type":"exact"},{"name":"decreased protein localization to spindle pole body during telophase during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during telophase","type":"exact"}],"termid":"FYPO:0002971"}


id: PR:Q09903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ddx27 gene.","definition_xrefs":["UniProtKB:Q09903","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase drs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.03","synonyms":[{"name":"Spom972h-ddx27","type":"exact"}],"termid":"PR:Q09903"}


id: MONDO:0006943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete relapsing polychondritis (obsolete MONDO:0006943)","termid":"MONDO:0006943","xrefs":{"Monarch":{"xref_id":"0006943"}}}


id: MONDO:0030051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with autistic features and language delay, with or without seizures","secondary_identifiers":["UMLS:C5394447","OMIM:618906","GARD:18522","MEDGEN:1715081","DOID:0081430"],"synonyms":[{"name":"IDDALDS","type":"exact"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH AUTISTIC FEATURES AND LANGUAGE DELAY, WITH OR WITHOUT SEIZURES","type":"exact"},{"name":"intellectual developmental disorder with autistic features and language delay, with or without seizures","type":"exact"}],"termid":"MONDO:0030051","xrefs":{"Monarch":{"xref_id":"0030051"}}}


id: MONDO:0003742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the heart. It is characterized by the presence of spindle-shaped fibroblasts and collagenous stroma formation in a herringbone growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart sarcoma","termid":"MONDO:0003354"},{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0004992"],"is_obsolete":false,"name":"heart fibrosarcoma","secondary_identifiers":["NCIT:C5361","DOID:6033","UMLS:C1332844","MEDGEN:232022"],"synonyms":[{"name":"Cardiac fibrosarcoma","type":"exact"},{"name":"cardiac fibrosarcoma","type":"exact"},{"name":"fibrosarcoma of heart","type":"exact"},{"name":"fibrosarcoma of the heart","type":"exact"},{"name":"heart fibrosarcoma","type":"exact"},{"name":"heart fibrosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003742","xrefs":{"Monarch":{"xref_id":"0003742"}}}


id: PBO:0069763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1046, pseudogene","termid":"PBO:0069763"}


id: GO:0070655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed mechanosensory epithelia.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory epithelium regeneration","termid":"GO:0070654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}


id: MONDO:0006752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Erysipelothrix rhusiopathiae.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Erysipelothrix infectious disease","termid":"MONDO:0006751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erysipelothrix rhusiopathiae infectious disease","secondary_identifiers":["MESH:D004887","SCTID:400105005","DOID:0050061","MEDGEN:266170","UMLS:C1276801","EFO:1000928","ICD10CM:A26"],"synonyms":[{"name":"Erysipelothrix rhusiopathiae caused disease or disorder","type":"exact"},{"name":"Erysipelothrix rhusiopathiae disease or disorder","type":"exact"},{"name":"erysipeloid","type":"exact"}],"termid":"MONDO:0006752","xrefs":{"Monarch":{"xref_id":"0006752"}}}


id: MONDO:0007059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrorenal syndrome comprises a wide spectrum of congenital malformative disorders characterized by the co-occurrence of distal limb anomalies (usually bilateral cleft feet and/or hands) and renal defects (e.g. unilateral or bilateral agenesis), that can be associated with a variety of other anomalies such as those of genitourinary tract (genital anomalies, ureteral hypoplasias, vesicoureteral reflux), abdominal well defects, intestinal atresias, and lung malformations. Familial cases have been reported in which an autosomal recessive inheritance was suspected.","definition_xrefs":["Orphanet:971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrorenal syndrome","secondary_identifiers":["UMLS:C3495490","GARD:514","OMIM:102520","SCTID:720458005","DOID:0060347","icd11.foundation:1948375645","MEDGEN:501193","MESH:C563159"],"synonyms":[{"name":"acrorenal syndrome","type":"exact"}],"termid":"MONDO:0007059","xrefs":{"Monarch":{"xref_id":"0007059"}}}


id: GO:0062242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"},{"relation_name":"part_of","term_name":"double membrane vesicle viral factory","termid":"GO:0039718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory membrane","synonyms":[{"name":"membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062242"}


id: GO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which an oenocyte splits off of an existing epithelial sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"oenocyte delamination","termid":"GO:0060233"}


id: FYPO:0007815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to protein aggregate centers is normal (i.e. indistinguishable from wild type). Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PomBase:mah","PMID:33386485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to protein aggregate center","synonyms":[{"name":"normal protein localisation to protein aggregate centre","type":"exact"},{"name":"normal protein localization to PAC","type":"exact"},{"name":"normal protein localization to PACs","type":"exact"},{"name":"normal protein localization to protein aggregate center during mitotic cell cycle","type":"related"},{"name":"normal protein localization to protein aggregate center during vegetative growth","type":"exact"}],"termid":"FYPO:0007815"}


id: GO:0070538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to oleic acid, the 18-carbon monounsaturated fatty acid (9Z)-octadec-9-enoic acid.","definition_xrefs":["GOC:lp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"oleic acid binding","termid":"GO:0070538"}


id: PBO:0039624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A7","termid":"PBO:0039624"}


id: GO:0035405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a threonine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-threonine phosphorylation (obsolete GO:0035405)","synonyms":[{"name":"histone threonine phosphorylation","type":"exact"}],"termid":"GO:0035405"}


id: PBO:0044403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 115, pseudogene","termid":"PBO:0044403"}


id: PBO:0063300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC-esterase domain containing 1A","termid":"PBO:0063300"}


id: GO:0015825
data:
  {"annotated_genes":["SJAG_04588","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65084],"is_not":false,"summary":null,"term":"GO:0015825"},{"annotations":[103624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine, the L-enantiomer of 2-amino-3-hydroxypropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_04588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-serine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0090479"],"synonyms":[{"name":"L-serine import","type":"narrow"}],"termid":"GO:0015825","terms_by_termid":{"GO:0015825":null,"GO:0090516":null}}


id: GO:0052133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in host (obsolete GO:0052133)","synonyms":[{"name":"positive aerotaxis within host","type":"exact"}],"termid":"GO:0052133"}


id: PBO:0031266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis","termid":"PBO:0031266"}


id: MONDO:0015059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive non-fluent aphasia (PNFA) is a form of frontotemporal dementia (FTD), characterized by agrammatism, laborious speech, alexia, and agraphia, frequently accompanied by apraxia of speech (AOS). Language comprehension is relatively preserved.","definition_xrefs":["Orphanet:100070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"GRN-related frontotemporal lobar degeneration with Tdp43 inclusions","termid":"MONDO:0011842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"progressive non-fluent aphasia","secondary_identifiers":["MESH:D057178","UMLS:C0751706","SCTID:716281000","MEDGEN:148373","NCIT:C85025","MedDRA:10029542","GARD:10793","DOID:0081390"],"synonyms":[{"name":"Agramatic variant of PPA","type":"exact"},{"name":"Agramatic variant of primary progressive aphasia","type":"exact"},{"name":"Primary Progressive Nonfluent aphasia","type":"exact"},{"name":"non-fluent primary progressive aphasia","type":"related"},{"name":"non-fluent variant PPA","type":"exact"}],"termid":"MONDO:0015059","xrefs":{"Monarch":{"xref_id":"0015059"}}}


id: PBO:0049208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 2B","termid":"PBO:0049208"}


id: GO:2000974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphoid progenitor cell differentiation","termid":"GO:1905457"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"negatively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pro-B cell differentiation","synonyms":[{"name":"negative regulation of pro-B cell development","type":"related"},{"name":"negative regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000974"}


id: FYPO:0006827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in the cytosol is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular zinc level","termid":"FYPO:0001534"},{"relation_name":"is_a","term_name":"decreased level of substance in cytosol","termid":"FYPO:0001605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic zinc level","synonyms":[{"name":"decreased cytosolic zinc ion level","type":"exact"},{"name":"decreased cytosolic zinc ion level during vegetative growth","type":"exact"},{"name":"decreased cytosolic zinc level during mitotic cell cycle","type":"related"},{"name":"decreased level of zinc ions in cytosol","type":"exact"},{"name":"decreased levels of free cytosolic zinc","type":"exact"},{"name":"reduced cytosolic zinc level","type":"exact"}],"termid":"FYPO:0006827"}


id: GO:0051221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of tungsten into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tungsten incorporation into metallo-sulfur cluster (obsolete GO:0051221)","synonyms":[{"name":"tungsten incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0051221"}


id: PBO:0079004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 4-1","termid":"PBO:0079004"}


id: PBO:0079704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding protein 1","termid":"PBO:0079704"}


id: MONDO:0012712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia with cerebellar atrophy","secondary_identifiers":["UMLS:C2673697","OMIM:611694","MEDGEN:392987","MESH:C567131"],"synonyms":[{"name":"DYTCA","type":"exact"},{"name":"dystonia with cerebellar atrophy","type":"exact"}],"termid":"MONDO:0012712","xrefs":{"Monarch":{"xref_id":"0012712"}}}


id: PBO:0057474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 592","termid":"PBO:0057474"}


id: PBO:0004781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 5 (predicted)","termid":"PBO:0004781"}


id: PBO:0061902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid related nociceptin receptor 1","termid":"PBO:0061902"}


id: PBO:0035964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_number_of_Rad52_foci_during_mitotic_S_phase","termid":"PBO:0035964"}


id: FYPO:0004894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is decreased during sporulation.","definition_xrefs":["PMID:11069657","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased 1,3-beta-D-glucan synthase activity during sporulation","synonyms":[{"name":"reduced 1,3-beta-D-glucan synthase activity during sporulation","type":"exact"}],"termid":"FYPO:0004894"}


id: PBO:0050029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA-DQB1 antisense RNA 1","termid":"PBO:0050029"}


id: GO:1904703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26412237","GOC:kmv","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell-cell junction","termid":"GO:0150119"},{"relation_name":"is_a","term_name":"regulation of protein localization to adherens junction","termid":"GO:1904702"},{"relation_name":"negatively_regulates","term_name":"protein localization to adherens junction","termid":"GO:0071896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to adherens junction","synonyms":[{"name":"down regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"down regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"down regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"down regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"down-regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"down-regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"down-regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"down-regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"downregulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"downregulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"downregulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"downregulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"inhibition of protein localisation in cell-cell adherens junction","type":"narrow"},{"name":"inhibition of protein localisation to cell-cell adherens junction","type":"narrow"},{"name":"inhibition of protein localization in cell-cell adherens junction","type":"narrow"},{"name":"inhibition of protein localization to cell-cell adherens junction","type":"narrow"},{"name":"negative regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"negative regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"negative regulation of protein localization in cell-cell adherens junction","type":"exact"}],"termid":"GO:1904703"}


id: GO:0051164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylitol, a five-carbon sugar alcohol derived from xylose by reduction of the carbonyl group. It is as sweet as sucrose and is used as a noncariogenic sweetner and as a sugar substitute in diabetic diets.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"xylitol metabolic process","synonyms":[{"name":"xylitol metabolism","type":"exact"}],"termid":"GO:0051164"}


id: PBO:0069619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 896, pseudogene","termid":"PBO:0069619"}


id: GO:1901797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of signal transduction by p53 class mediator","synonyms":[{"name":"down regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"down-regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"downregulation of signal transduction by p53 class mediator","type":"exact"},{"name":"inhibition of signal transduction by p53 class mediator","type":"narrow"}],"termid":"GO:1901797"}


id: GO:0071836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a nectar by a cell or a tissue. Nectar is a fluid secreted by many angiosperms to promote pollination by providing a reward to pollinators. Nectar may also deter certain organisms from visiting or play other biological roles. Nectar is a complex solution that may include the following types of compounds: sugars, amino acids, organic acids, alkaloids, flavonoids, glycosides, vitamins, phenolics, metal ions, oils, free fatty acids, and proteins.","definition_xrefs":["GOC:kad","PMID:19861655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nectar secretion","synonyms":[{"name":"nectar production","type":"related"}],"termid":"GO:0071836"}


id: PBO:0029532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_septum","termid":"PBO:0029532"}


id: MONDO:0021408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the frontal sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of frontal sinus","secondary_identifiers":["NCIT:C4367","SCTID:195759002","UMLS:C0339814","icd11.foundation:1462900314","MEDGEN:137927","ICD9:471.8"],"synonyms":[{"name":"frontal sinus polyp","type":"exact"},{"name":"polyp of the frontal sinus","type":"exact"}],"termid":"MONDO:0021408","xrefs":{"Monarch":{"xref_id":"0021408"}}}


id: PBO:0065018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 2 pseudogene 2","termid":"PBO:0065018"}


id: GO:0008319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete prenyl protein specific endopeptidase activity (obsolete GO:0008319)","synonyms":[{"name":"prenyl protein specific endopeptidase activity","type":"exact"}],"termid":"GO:0008319"}


id: PBO:0079962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 9 Y-linked","termid":"PBO:0079962"}


id: SO:1000144
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby the duplicated sequences are carried as a free centric element.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_duplication","synonyms":[{"name":"free duplication","type":"exact"}],"termid":"SO:1000144"}


id: PATO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000852 relative auditory threshold (obsolete PATO:0000852)","termid":"PATO:0000852"}


id: PBO:0074550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 3","termid":"PBO:0074550"}


id: SO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A loop in ribosomal RNA containing the sites of attack for ricin and sarcin.","direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric_RNA_internal_loop","termid":"SO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcin_like_RNA_motif","synonyms":[{"name":"sarcin like RNA motif","type":"exact"},{"name":"sarcin/ricin RNA domain","type":"exact"},{"name":"sarcin/ricin domain","type":"exact"},{"name":"sarcin/ricin loop","type":"exact"}],"termid":"SO:0000024"}


id: PBO:0108527
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as ortholog of human WDR7","termid":"PBO:0108527"}


id: MONDO:0004863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"purulent endophthalmitis","secondary_identifiers":["icd11.foundation:830703931","ICD9:360.00","ICD10CM:H44.0","SCTID:41720003","DOID:9724","MEDGEN:537163","ICD9:360.0","UMLS:C0259800"],"termid":"MONDO:0004863","xrefs":{"Monarch":{"xref_id":"0004863"}}}


id: SO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that only exists within the promoter region of a eukaryotic gene.","definition_xrefs":["GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_promoter_element","termid":"SO:0002309"},{"relation_name":"part_of","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core_eukaryotic_promoter_element","synonyms":[{"name":"core eukaryotic promoter element","type":"exact"},{"name":"general transcription factor binding site","type":"related"}],"termid":"SO:0001660"}


id: FYPO:0007157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal histone binding","termid":"FYPO:0007157"}


id: MONDO:0035707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis-intellectual disability syndrome/genitopatellar overlap syndrome","secondary_identifiers":["MEDGEN:1842711","GARD:22398","UMLS:C5681588","Orphanet:597746"],"termid":"MONDO:0035707","xrefs":{"Monarch":{"xref_id":"0035707"}}}


id: MONDO:0009841
data:
  {"annotated_genes":["SJAG_05223"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85889],"is_not":false,"summary":null,"term":"MONDO:0009841"}]},"cv_name":"mondo","definition":"PEHO (Progressive encephalopathy with Edema, Hypsarrhythmia and Optic atrophy) syndrome is a rare neurodegenerative disorder belonging to the group of infantile progressive encephalopathies.","definition_xrefs":["Orphanet:2836"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"PEHO syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1850055","DOID:0080539","GARD:4264","MEDGEN:342404","icd11.foundation:976613527","OMIM:260565","MESH:C536317"],"synonyms":[{"name":"infantile Cerebellooptic atrophy","type":"related"},{"name":"peho","type":"related"},{"name":"peho syndrome","type":"exact"},{"name":"peho-like syndrome","type":"related"},{"name":"progressive encephalopathy with edema, hypsarrhythmia and optic atrophy","type":"exact"},{"name":"progressive encephalopathy with edema, hypsarrhythmia, and optic atrophy","type":"related"},{"name":"progressive encephalopathy-optic atrophy syndrome","type":"exact"}],"termid":"MONDO:0009841","terms_by_termid":{"MONDO:0009841":null},"xrefs":{"Monarch":{"xref_id":"0009841"}}}


id: GO:0044628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of complement activation by the classical pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of complement activation, classical pathway in another organism (obsolete GO:0044628)","synonyms":[{"name":"positive regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044628"}


id: GO:0150069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of tubulin deacetylase activity.","definition_xrefs":["GOC:bc","PMID:19457097","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of tubulin deacetylase activity (obsolete GO:0150069)","termid":"GO:0150069"}


id: PBO:0005754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S20 (predicted)","termid":"PBO:0005754"}


id: GO:0016445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of immunoglobulins.","definition_xrefs":["GOC:ma","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"part_of","term_name":"immunoglobulin production","termid":"GO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"somatic diversification of immunoglobulins","synonyms":[{"name":"somatic diversification of antibodies","type":"exact"}],"termid":"GO:0016445"}


id: PBO:0054371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1765","termid":"PBO:0054371"}


id: PBO:0083812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential RNA-binding G protein effector of mating response pathway; ligand-activated RNA-binding protein that delivers RNAs involved in polarization and perpetualizing mating signal to shmoo tip during pheromone signaling; Scp160p-mediated RNA trafficking essential for chemotropism and successful mating; mainly associated with nuclear envelope and ER, interacts in mRNA-dependent manner with translating ribosomes via multiple KH domains, similar to vertebrate vigilins","termid":"PBO:0083812"}


id: PBO:0090345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop5","termid":"PBO:0090345"}


id: GO:0009601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from an insect is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of insect","synonyms":[{"name":"perception of insect","type":"related"}],"termid":"GO:0009601"}


id: PBO:0082805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U2 snRNP complex; disruption causes reduced U2 snRNP levels; physically interacts with Msl1p; putative homolog of human U2A' snRNP protein","termid":"PBO:0082805"}


id: GO:0042370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more phosphate groups from thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine diphosphate metabolic process","termid":"GO:0042357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"thiamine diphosphate dephosphorylation","synonyms":[{"name":"TPP dephosphorylation","type":"exact"},{"name":"thiamin diphosphate dephosphorylation","type":"exact"}],"termid":"GO:0042370"}


id: PBO:0012608
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ADR2","termid":"PBO:0012608"}


id: PBO:0077748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll interacting protein","termid":"PBO:0077748"}


id: PR:Q9P7N9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03727","PRO:DNx","PANTHER:PTHR20902:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.05","secondary_identifiers":["UniProtKB:Q9P7N9"],"synonyms":[{"name":"Spom972h-TRAPPC5","type":"exact"},{"name":"TRAPP subunit trs31 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N9"}


id: PBO:0088410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg9","termid":"PBO:0088410"}


id: PR:Q9HDY1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase spindle elongation protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:19686686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase spindle elongation protein 1","termid":"PR:000027517"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase spindle elongation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.09","secondary_identifiers":["UniProtKB:Q9HDY1","PR:000027518"],"synonyms":[{"name":"SPAPB1A10.09","type":"related"},{"name":"Spom972h-ase1","type":"exact"}],"termid":"PR:Q9HDY1"}


id: GO:1902606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["PMID:23407708","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of large conductance calcium-activated potassium channel activity (obsolete GO:1902606)","synonyms":[{"name":"regulation of BK KCa channels","type":"exact"},{"name":"regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"regulation of BK channel activity","type":"related"},{"name":"regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902606"}


id: PBO:0071883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 21","termid":"PBO:0071883"}


id: PBO:0003627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide riboside kinase (predicted)","termid":"PBO:0003627"}


id: PBO:0005631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein (predicted)","termid":"PBO:0005631"}


id: GO:0106371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + primary fluorescent chlorophyll catabolite + reduced [NADPH--hemoprotein reductase] = formate + 2 H+ + oxidized [NADPH--hemoprotein reductase] + primary fluorescent dioxobilin-type chlorophyll catabolite.","definition_xrefs":["PMID:23723324","RHEA:67172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"fluorescent chlorophyll catabolite monooxygenase (deformylase) activity","termid":"GO:0106371"}


id: MONDO:0859248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, punctiform and polychromatic pre-descemet","secondary_identifiers":["MEDGEN:1806182","OMIM:619871","UMLS:C5676982"],"termid":"MONDO:0859248","xrefs":{"Monarch":{"xref_id":"0859248"}}}


id: PBO:0056385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 15","termid":"PBO:0056385"}


id: PBO:0082939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic DEAD-box helicase and mRNA decapping activator; interacts with decapping and deadenylase complexes to coordinate mRNA decapping and decay; regulates general translational repression; translational activator of select mRNAs during filamentous growth, mating and autophagy; cooperates with Ngr1p to promote specific mRNA decay; ATP- and RNA-bound form promotes processing body assembly, while ATPase stimulation by Not1p promotes disassembly; forms cytoplasmic foci on replication stress","termid":"PBO:0082939"}


id: PBO:0044690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDR1 divergent transcript","termid":"PBO:0044690"}


id: PBO:0055308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2735","termid":"PBO:0055308"}


id: GO:0097166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of lens epithelial cells, resulting in the expansion of a cell population. Lens epithelial cells make up the lens epithelium, which is located in the anterior portion of the lens between the lens capsule and the lens fibers and is a simple cuboidal epithelium. The epithelial cells of the lens regulate most of the homeostatic functions of the lens such as osmolarity and liquid volume. The lens epithelial cells also serve as the progenitors for new lens fibers. The lens epithelium constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth.","definition_xrefs":["GOC:yaf","CL:0002224","PMID:18423449","Wikipedia:Lens_%28anatomy%29#Lens_epithelium"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens epithelial cell proliferation","termid":"GO:0097166"}


id: GO:2000530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of insulin secretion involved in cellular response to glucose stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus (obsolete GO:2000530)","synonyms":[{"name":"positive regulation of regulation of insulin secretion in response to glucose","type":"exact"},{"name":"positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus","type":"exact"}],"termid":"GO:2000530"}


id: PBO:0076401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor, RNA polymerase I subunit C","termid":"PBO:0076401"}


id: MONDO:0019797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrodysostosis (ACRDYS) is a rare primary bone dysplasia characterized by severe brachydactyly, peripheral dysostosis with facial dysostosis, nasal hypoplasia, and developmental delay.","definition_xrefs":["Orphanet:950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandibulofacial dysostosis","termid":"MONDO:0015483"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrodysostosis","secondary_identifiers":["OMIMPS:101800","DOID:14669","ICD9:756.59","MEDGEN:113097","icd11.foundation:477546932","MESH:C538179","NORD:722","SCTID:66758006","UMLS:C0220659","GARD:5724"],"synonyms":[{"name":"Arkless-Graham syndrome","type":"exact"},{"name":"Maroteaux-Malamut syndrome","type":"exact"},{"name":"acrodysplasia","type":"exact"},{"name":"nasal hypoplasia-peripheral dysostosis-intellectual disability syndrome","type":"related"},{"name":"peripheral dysostosis-nasal hypoplasia-intellectual disability (PNM) syndrome","type":"related"}],"termid":"MONDO:0019797","xrefs":{"Monarch":{"xref_id":"0019797"}}}


id: PBO:0055798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 2, pseudogene","termid":"PBO:0055798"}


id: PBO:0084377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long chain fatty acyl-CoA synthetase; activates imported fatty acids with a preference for C16:0-C18:0 chain lengths; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0084377"}


id: PBO:0083980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosyl transferase; involved in N-linked glycosylation; adds glucose to the dolichol-linked oligosaccharide precursor prior to transfer to protein during lipid-linked oligosaccharide biosynthesis; similar to Alg6p; human homolog ALG8 can complement yeast null mutant","termid":"PBO:0083980"}


id: PBO:0041615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 1","termid":"PBO:0041615"}


id: FYPO:0001792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body duplication does not occur, leaving the cell with a single spindle pole body later in the cell cycle than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body duplication","termid":"FYPO:0001791"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitotic spindle pole body duplication","synonyms":[{"name":"abolished mitotic SPB duplication","type":"exact"},{"name":"abolished mitotic spindle pole body duplication during vegetative growth","type":"exact"},{"name":"abolished spindle pole body duplication during mitotic cell cycle","type":"related"},{"name":"mitotic spindle pole body duplication abolished","type":"exact"},{"name":"single mitotic spindle pole body","type":"related"}],"termid":"FYPO:0001792"}


id: GO:0160133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of bicarbonate through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:18400985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"bicarbonate channel activity","synonyms":[{"name":"hydrogencarbonate channel activity","type":"exact"}],"termid":"GO:0160133"}


id: PBO:0039570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 65","termid":"PBO:0039570"}


id: PBO:0083036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta(9) fatty acid desaturase; required for monounsaturated fatty acid synthesis and for normal distribution of mitochondria","termid":"PBO:0083036"}


id: PBO:0053525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 520","termid":"PBO:0053525"}


id: FYPO:0003126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable post-anaphase array of microtubules.","definition_xrefs":["PMID:24006493","PMID:9601091","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal post-anaphase array","termid":"FYPO:0004316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"post-anaphase array absent from cell","synonyms":[{"name":"PAA absent from cell","type":"exact"},{"name":"absent post-anaphase array","type":"exact"},{"name":"post-anaphase array absent from cell during mitotic cell cycle","type":"related"},{"name":"post-anaphase array absent from cell during vegetative growth","type":"exact"},{"name":"post-anaphase microtubule array absent from cell","type":"exact"}],"termid":"FYPO:0003126"}


id: PBO:0068357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138 pseudogene 2","termid":"PBO:0068357"}


id: GO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to, but narrower than, that of pepsin A. Does not cleave the Gln4-His5 bond in the B chain of insulin.","definition_xrefs":["EC:3.4.23.5"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin D activity (obsolete GO:0004192)","synonyms":[{"name":"cathepsin D activity","type":"exact"}],"termid":"GO:0004192"}


id: PBO:0074797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13B-2","termid":"PBO:0074797"}


id: GO:0016157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an NDP-alpha-D-glucose + D-fructose = a ribonucleoside 5'-diphosphate + H+ + sucrose. The phosphate acceptor can be UDP or ADP.","definition_xrefs":["RHEA:16241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"sucrose synthase activity","secondary_identifiers":["MetaCyc:SUCROSE-SYNTHASE-RXN","EC:2.4.1.13"],"synonyms":[{"name":"NDP-glucose:D-fructose 2-alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-fructose glucosyltransferase activity","type":"related"},{"name":"UDPglucose-fructose glucosyltransferase activity","type":"related"},{"name":"sucrose synthetase activity","type":"related"},{"name":"sucrose-UDP glucosyltransferase activity","type":"related"},{"name":"sucrose-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-fructose glucosyltransferase activity","type":"related"}],"termid":"GO:0016157"}


id: GO:0046703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lectin-like natural killer cell receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"natural killer cell lectin-like receptor binding","synonyms":[{"name":"KLRC4 receptor binding","type":"narrow"},{"name":"NK cell lectin-like receptor binding","type":"exact"},{"name":"NKG2D receptor binding","type":"narrow"}],"termid":"GO:0046703"}


id: PR:O42931
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04090","PANTHER:PTHR23073:SF13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.07c","secondary_identifiers":["UniProtKB:O42931"],"synonyms":[{"name":"Spom972h-PSMC2","type":"exact"}],"termid":"PR:O42931"}


id: GO:1902953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ER to Golgi vesicle-mediated transport.","definition_xrefs":["GOC:sjp","GOC:TermGenie","PMID:17855360","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of ER to Golgi vesicle-mediated transport","termid":"GO:0060628"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of ER to Golgi vesicle-mediated transport","synonyms":[{"name":"activation of ER to Golgi transport","type":"narrow"},{"name":"activation of ER to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"positive regulation of ER to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of ER to Golgi transport","type":"exact"},{"name":"up regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of ER to Golgi transport","type":"exact"},{"name":"up-regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of ER to Golgi transport","type":"exact"},{"name":"upregulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"}],"termid":"GO:1902953"}


id: PBO:0053925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1222","termid":"PBO:0053925"}


id: FYPO:0000662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified catalytic activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased catalytic activity","termid":"FYPO:0000662"}


id: GO:0004347
data:
  {"annotated_genes":["SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69777],"is_not":false,"summary":null,"term":"GO:0004347"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 6-phosphate = beta-D-fructose 6-phosphate.","definition_xrefs":["RHEA:11816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"glucose-6-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70475","MetaCyc:PGLUCISOM-RXN","Reactome:R-HSA-70471","EC:5.3.1.9"],"synonyms":[{"name":"D-glucose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-glucose-6-phosphate ketol-isomerase activity","type":"related"},{"name":"glucose phosphate isomerase activity","type":"related"},{"name":"hexose monophosphate isomerase activity","type":"broad"},{"name":"hexose phosphate isomerase activity","type":"related"},{"name":"hexosephosphate isomerase activity","type":"broad"},{"name":"oxoisomerase activity","type":"related"},{"name":"phosphoglucoisomerase activity","type":"related"},{"name":"phosphoglucose isomerase activity","type":"related"},{"name":"phosphohexoisomerase activity","type":"broad"},{"name":"phosphohexomutase activity","type":"broad"},{"name":"phosphohexose isomerase activity","type":"broad"},{"name":"phosphosaccharomutase activity","type":"broad"}],"termid":"GO:0004347","terms_by_termid":{"GO:0004347":null}}


id: PBO:0028881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K36_methylation","termid":"PBO:0028881"}


id: PBO:0081536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 445","termid":"PBO:0081536"}


id: GO:0045753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of acetate catabolic process","termid":"GO:0045734"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"negative regulation of acetate catabolic process","synonyms":[{"name":"down regulation of acetate catabolic process","type":"exact"},{"name":"down-regulation of acetate catabolic process","type":"exact"},{"name":"downregulation of acetate catabolic process","type":"exact"},{"name":"inhibition of acetate catabolic process","type":"narrow"},{"name":"negative regulation of acetate breakdown","type":"exact"},{"name":"negative regulation of acetate catabolism","type":"exact"},{"name":"negative regulation of acetate degradation","type":"exact"}],"termid":"GO:0045753"}


id: PBO:0064599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F1 divergent transcript","termid":"PBO:0064599"}


id: PBO:0040660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 5","termid":"PBO:0040660"}


id: GO:0141114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which a symbiont inhibits or disrupts the normal execution of the activation of complement in its host.","definition_xrefs":["PMID:20194595","PMID:25830295"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host complement activation (obsolete GO:0141114)","synonyms":[{"name":"suppression of complement activation by another organism","type":"broad"}],"termid":"GO:0141114"}


id: PBO:0040351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g like","termid":"PBO:0040351"}


id: PBO:0068005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 307","termid":"PBO:0068005"}


id: MONDO:0030015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"bone marrow failure syndrome 6","secondary_identifiers":["OMIM:618849","MEDGEN:1717739","UMLS:C5394274"],"synonyms":[{"name":"BMFS6","type":"exact"},{"name":"BONE MARROW FAILURE SYNDROME 6","type":"exact"},{"name":"bone marrow failure syndrome 6","type":"exact"}],"termid":"MONDO:0030015","xrefs":{"Monarch":{"xref_id":"0030015"}}}


id: MONDO:0012257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic renal or urinary tract malformation (obsolete MONDO:0019721)","termid":"MONDO:0019721"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cerebrorenodigital syndrome","secondary_identifiers":["UMLS:C1836287","GARD:15458","MEDGEN:373053","Orphanet:1396","OMIM:609345","MESH:C563731"],"synonyms":[{"name":"CEREBRORENODIGITAL syndrome with limb malformations and triradiate acetabula","type":"related"}],"termid":"MONDO:0012257","xrefs":{"Monarch":{"xref_id":"0012257"}}}


id: PBO:0064281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M2","termid":"PBO:0064281"}


id: PBO:0028615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ADP_binding","termid":"PBO:0028615"}


id: FYPO:0000572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mating projection assembly is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of shmoo formation","synonyms":[{"name":"increased rate of conjugation tube formation","type":"exact"},{"name":"increased rate of mating projection assembly","type":"exact"},{"name":"increased rate of mating projection formation","type":"exact"},{"name":"increased rate of shmoo assembly","type":"exact"},{"name":"shmoo formation: increased rate","type":"related"}],"termid":"FYPO:0000572"}


id: MONDO:1012413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal pancytopenia, non-human animal","termid":"MONDO:1011702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal pancytopenia, cattle","secondary_identifiers":["OMIA:001539-9913"],"termid":"MONDO:1012413","xrefs":{"Monarch":{"xref_id":"1012413"}}}


id: PBO:0054089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1442","termid":"PBO:0054089"}


id: PBO:0054294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1685","termid":"PBO:0054294"}


id: GO:0045648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"positively_regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte differentiation","synonyms":[{"name":"activation of erythrocyte differentiation","type":"narrow"},{"name":"positive regulation of RBC differentiation","type":"exact"},{"name":"positive regulation of red blood cell differentiation","type":"exact"},{"name":"stimulation of erythrocyte differentiation","type":"narrow"},{"name":"up regulation of erythrocyte differentiation","type":"exact"},{"name":"up-regulation of erythrocyte differentiation","type":"exact"},{"name":"upregulation of erythrocyte differentiation","type":"exact"}],"termid":"GO:0045648"}


id: GO:0097511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A branched cellular projection (or cytoplasmic extension) that is extended from the surface of a dendritic immune cell, and which enables the cell to sample luminal pathogens and increase the surface area for antigen presentation to T cells.","definition_xrefs":["GOC:cjm","GOC:BHF","CL:0000451","PMID:12200351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic cell dendrite","termid":"GO:0097511"}


id: MONDO:0022941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness hypospadias metacarpal and metatarsal syndrome","termid":"MONDO:0022941","xrefs":{"Monarch":{"xref_id":"0022941"}}}


id: PBO:0028643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028643"}


id: MONDO:1010598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoparathyroidism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, non-human animal","termid":"MONDO:1010056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism, dog","secondary_identifiers":["OMIA:000528-9615"],"termid":"MONDO:1010598","xrefs":{"Monarch":{"xref_id":"1010598"}}}


id: PBO:0074313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 divergent transcript","termid":"PBO:0074313"}


id: PBO:0082263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminolevulinate dehydratase; a homo-octameric enzyme, catalyzes the conversion of 5-aminolevulinate to porphobilinogen, the second step in heme biosynthesis; enzymatic activity is zinc-dependent; localizes to the cytoplasm and nucleus; human homolog ALAD can complement yeast hem2 mutant","termid":"PBO:0082263"}


id: PBO:0081215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 5","termid":"PBO:0081215"}


id: MONDO:0958151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic bacterial infectious disease","termid":"MONDO:0000316"},{"relation_name":"is_a","term_name":"burkholderia infectious disease","termid":"MONDO:0043953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cepacia syndrome","secondary_identifiers":["DOID:0070528"],"termid":"MONDO:0958151","xrefs":{"Monarch":{"xref_id":"0958151"}}}


id: MONDO:0012988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the FGF8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 6 with or without anosmia","secondary_identifiers":["MEDGEN:765488","MESH:C567199","OMIM:612702","UMLS:C3552574","ICD10CM:E23.0","DOID:0090086","GARD:10774"],"synonyms":[{"name":"FGF8 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH6","type":"related"},{"name":"KAL6","type":"narrow"},{"name":"Kallmann syndrome 6","type":"related"},{"name":"hypogonadotropic hypogonadism 6 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in FGF8","type":"exact"}],"termid":"MONDO:0012988","xrefs":{"Monarch":{"xref_id":"0012988"}}}


id: GO:0000052
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"citrulline metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"citrulline metabolism","type":"exact"}],"termid":"GO:0000052","terms_by_termid":{"GO:0019240":null}}


id: GO:0034882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-aconitamide + H2O = cis-aconitate + HN3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-aconitamide amidase activity (obsolete GO:0034882)","termid":"GO:0034882"}


id: FYPO:0002404
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119249,119336,119256,119254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[119011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006433"},{"annotations":[119305,119291,119293,119290,119302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001784"},{"annotations":[119288,119292,119304,119289,119296,119301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[118963],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the endomembrane system is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04464":null},"genotype_count":12,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal endomembrane system","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_01745","SJAG_04464","SJAG_03940","SJAG_03449","SJAG_00426","SJAG_01906","SJAG_02763"],"single_locus_genotype_uniquenames":["ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","nem1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal endomembrane system during mitotic cell cycle","type":"related"},{"name":"abnormal endomembrane system during vegetative growth","type":"exact"},{"name":"abnormal endomembrane system physical object quality","type":"exact"}],"termid":"FYPO:0002404","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: GO:0098979
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse consisting of a single presynapse and multiple postsynapses. These postsynapses may come from the same cell of from different cells. Polyadic synapses are common in arthropod and nematode central nervous systems.","definition_xrefs":["PMID:26780543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polyadic synapse","termid":"GO:0098979"}


id: PBO:0063779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 6","termid":"PBO:0063779"}


id: PBO:0059297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L46","termid":"PBO:0059297"}


id: GO:1900473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:8056324"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900473)","synonyms":[{"name":"negative regulation of phosphatidylcholine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900473"}


id: GO:0097220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sieve plate that contains a single specialized sieve area.","definition_xrefs":["POC:curators","ISBN:0471738433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve plate","termid":"GO:0097218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"simple sieve plate","termid":"GO:0097220"}


id: MONDO:0022586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone dysplasia Moore type","secondary_identifiers":["GARD:923"],"termid":"MONDO:0022586","xrefs":{"Monarch":{"xref_id":"0022586"}}}


id: MONDO:0009984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that is characterized by onset of symptoms in the fifth or sixth decade of life.","definition_xrefs":["DOID:0110421","PMID:1424244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"late-adult onset retinitis pigmentosa","secondary_identifiers":["MEDGEN:340316","OMIM:268025","MESH:C564840","GARD:15230","UMLS:C1849400","ICD10CM:H35.5"],"synonyms":[{"name":"retinitis pigmentosa, 'Senile'","type":"related"},{"name":"retinitis pigmentosa, late-ADULT onset","type":"related"},{"name":"senile retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0009984","xrefs":{"Monarch":{"xref_id":"0009984"}}}


id: GO:0060568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"regulation of peptide hormone processing","termid":"GO:0060568"}


id: PBO:0072586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 8","termid":"PBO:0072586"}


id: PR:O13781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.03 gene.","definition_xrefs":["UniProtKB:O13781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.03","synonyms":[{"name":"Spom972h-SPAC17G6.03","type":"exact"}],"termid":"PR:O13781"}


id: PBO:0062307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 4 pseudogene","termid":"PBO:0062307"}


id: MONDO:0021579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the femur.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of femur","secondary_identifiers":["MEDGEN:8809","UMLS:C0015807","ICD9:239.2","SCTID:126583006"],"synonyms":[{"name":"femur neoplasm","type":"exact"},{"name":"femur neoplasm (disease)","type":"exact"},{"name":"femur tumor","type":"exact"},{"name":"femur tumour","type":"exact"},{"name":"neoplasm of femur","type":"exact"},{"name":"tumor of femur","type":"exact"},{"name":"tumour of femur","type":"exact"}],"termid":"MONDO:0021579","xrefs":{"Monarch":{"xref_id":"0021579"}}}


id: PBO:0031474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mercury","termid":"PBO:0031474"}


id: PATO:0001230
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's power or force.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strength","termid":"PATO:0001230"}


id: GO:1901037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed during the M/G1 transition of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:TermGenie","GOC:mtg_cell_cycle","PMID:12411492"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle (obsolete GO:1901037)","synonyms":[{"name":"global transcription regulation from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of global transcription from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of transcription during M/G1 transition of mitotic cell cycle","type":"broad"},{"name":"regulation of transcription from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in M/G1 transition of mitotic cell cycle","type":"related"}],"termid":"GO:1901037"}


id: GO:0047707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + CoA = AMP + diphosphate + biotinyl-CoA.","definition_xrefs":["MetaCyc:BIOTIN--COA-LIGASE-RXN","EC:6.2.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"biotin-CoA ligase activity","secondary_identifiers":["RHEA:19681"],"synonyms":[{"name":"biotin CoA synthetase activity","type":"related"},{"name":"biotin:CoA ligase (AMP-forming)","type":"related"},{"name":"biotinyl coenzyme A synthetase activity","type":"related"},{"name":"biotinyl-CoA synthetase activity","type":"related"}],"termid":"GO:0047707"}


id: PATO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located at a right angle relative to another entity.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perpendicular to","termid":"PATO:0002434"}


id: MOD:00947
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Entries from DeltaMass see http://www.abrf.org/index.cfm/dm.home?AvgMass=all.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized protein modification","termid":"MOD:00032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeltaMass","termid":"MOD:00947"}


id: PBO:0004514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific cyclin Crs1","termid":"PBO:0004514"}


id: GO:1990428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microRNA (miRNA) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.","definition_xrefs":["GO:jl","PMID:24356509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"miRNA transport","synonyms":[{"name":"microRNA transport","type":"exact"}],"termid":"GO:1990428"}


id: PBO:0059010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MME antisense RNA 1","termid":"PBO:0059010"}


id: GO:0060456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of digestive system process","termid":"GO:0060456"}


id: MONDO:0012666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 6","secondary_identifiers":["MEDGEN:409877","OMIM:611403","UMLS:C1969640"],"synonyms":[{"name":"ASRT6","type":"related"},{"name":"asthma-related traits, susceptibility to, 6","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 6","type":"exact"}],"termid":"MONDO:0012666","xrefs":{"Monarch":{"xref_id":"0012666"}}}


id: GO:0043012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the binding and fusion of a sperm to the oocyte plasma membrane.","definition_xrefs":["PMID:11483596","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"fusion of sperm to egg plasma membrane involved in single fertilization","termid":"GO:0007342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of fusion of sperm to egg plasma membrane","synonyms":[{"name":"regulation of sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0043012"}


id: GO:0048070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigmentation","termid":"GO:0120305"},{"relation_name":"regulates","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental pigmentation","synonyms":[{"name":"regulation of pigmentation during development","type":"exact"}],"termid":"GO:0048070"}


id: PBO:0040938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 9","termid":"PBO:0040938"}


id: MONDO:0025483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumors or cancer of the mammary gland in animals (mammary glands, animal).","definition_xrefs":["MESH:D015674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mammary neoplasms, animal","secondary_identifiers":["OMIA:001777"],"synonyms":[{"name":"animal mammary carcinoma","type":"related"},{"name":"animal mammary carcinomas","type":"related"},{"name":"animal mammary neoplasm","type":"related"},{"name":"animal mammary neoplasms","type":"related"},{"name":"carcinoma, animal mammary","type":"related"},{"name":"carcinomas, animal mammary","type":"related"},{"name":"mammary carcinoma, animal","type":"related"},{"name":"mammary carcinomas, animal","type":"related"},{"name":"mammary neoplasm","type":"related"},{"name":"mammary neoplasm, animal","type":"related"},{"name":"mammary neoplasms","type":"related"},{"name":"neoplasm, animal mammary","type":"related"},{"name":"neoplasm, mammary","type":"related"},{"name":"neoplasms, animal mammary","type":"related"},{"name":"neoplasms, mammary","type":"related"}],"termid":"MONDO:0025483","xrefs":{"Monarch":{"xref_id":"0025483"}}}


id: GO:0099066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the neuronal dense core vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of neuronal dense core vesicle membrane (obsolete GO:0099066)","termid":"GO:0099066"}


id: PBO:0090713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit Sac3","termid":"PBO:0090713"}


id: PBO:0044674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD domain containing 1","termid":"PBO:0044674"}


id: SO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo to which new deoxyribonucleotides can be added by DNA polymerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_oligo","termid":"SO:0000441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer","secondary_identifiers":["http://en.wikipedia.org/wiki/Primer_(molecular_biology)"],"synonyms":[{"name":"DNA primer","type":"exact"},{"name":"primer oligonucleotide","type":"exact"},{"name":"primer polynucleotide","type":"exact"},{"name":"primer sequence","type":"exact"}],"termid":"SO:0000112"}


id: PBO:0073977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 23 member 2","termid":"PBO:0073977"}


id: GO:1905207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiocyte differentiation.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:23069713","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiocyte differentiation","synonyms":[{"name":"regulation of cardiac cell differentiation","type":"exact"},{"name":"regulation of heart cell differentiation","type":"exact"}],"termid":"GO:1905207"}


id: FYPO:0006593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of spindle microtubules from the spindle pole body (SPB) occurs to a lesser extent than normal.","definition_xrefs":["PMID:19942852","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic microtubule nucleation","termid":"FYPO:0006336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule nucleation from spindle pole body","synonyms":[{"name":"decreased microtubule nucleation from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation by spindle pole body","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from SPB","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during mitotic M phase","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic SPB","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic spindle pole body","type":"exact"},{"name":"reduced mitotic spindle microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0006593"}


id: PBO:0114664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-dependent synthetase/ligase domain/Fatty acyl-coenzyme A reductase-like, NAD-binding domain, implicated in fatty acid metabolism, or amino acid metabolism","termid":"PBO:0114664"}


id: PBO:0114292
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein","termid":"PBO:0114292"}


id: GO:0052344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the production of phytoalexins as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host phytoalexin production (obsolete GO:0052344)","synonyms":[{"name":"activation by symbiont of host phytoalexin production","type":"narrow"},{"name":"positive regulation by organism of phytoalexin production in other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host phytoalexin production","type":"narrow"},{"name":"up regulation by symbiont of host phytoalexin production","type":"exact"},{"name":"up-regulation by symbiont of host phytoalexin production","type":"exact"},{"name":"upregulation by symbiont of host phytoalexin production","type":"exact"}],"termid":"GO:0052344"}


id: PBO:0043882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular repressor of E1A stimulated genes 1","termid":"PBO:0043882"}


id: MONDO:0007542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camurati-Englemann disease (CED) is a rare, clinically variable bone dysplasia syndrome characterized by hyperostosis of the long bones, skull, spine and pelvis, associated with severe pain in the extremities, a wide-based waddling gait, joint contractures, muscle weakness and easy fatigability.","definition_xrefs":["Orphanet:1328"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteosclerosis","termid":"MONDO:0002933"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Camurati-Engelmann disease","secondary_identifiers":["MEDGEN:4268","NANDO:2200970","NCIT:C84610","OMIM:131300","ICD9:756.59","NORD:885","SCTID:318761000119105","UMLS:C0011989","DOID:4997","GARD:1072"],"synonyms":[{"name":"CAEND","type":"related"},{"name":"CED","type":"related"},{"name":"Camurati-Engelmann disease","type":"exact"},{"name":"Camurati-Engelmann syndrome","type":"exact"},{"name":"Camurati-Englemann disease","type":"exact"},{"name":"DPD1","type":"related"},{"name":"Engelman's disease","type":"exact"},{"name":"Engelmann disease","type":"related"},{"name":"diaphyseal dysplasia","type":"exact"},{"name":"diaphyseal dysplasia 1, progressive","type":"related"},{"name":"progressive diaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0007542","xrefs":{"Monarch":{"xref_id":"0007542"}}}


id: MONDO:0021514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pericardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"benign neoplasm of pericardium","secondary_identifiers":["icd11.foundation:1296244385","MEDGEN:151928","SCTID:92289001","UMLS:C0685118","NCIT:C8536"],"synonyms":[{"name":"benign neoplasm of the pericardium","type":"exact"},{"name":"benign pericardial neoplasm","type":"exact"},{"name":"benign pericardial tumor","type":"exact"},{"name":"benign pericardial tumour","type":"exact"},{"name":"benign tumor of pericardium","type":"exact"},{"name":"benign tumor of the pericardium","type":"exact"},{"name":"benign tumour of pericardium","type":"exact"},{"name":"benign tumour of the pericardium","type":"exact"},{"name":"pericardium benign neoplasm","type":"exact"}],"termid":"MONDO:0021514","xrefs":{"Monarch":{"xref_id":"0021514"}}}


id: GO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection in B cells. Mechanisms of negative selection include anergy and deletion.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell negative selection","synonyms":[{"name":"B lymphocyte negative selection","type":"exact"},{"name":"B-cell negative selection","type":"exact"},{"name":"B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002352"}


id: GO:0032021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of five proteins, designated NELF-A, -B, -C, -D, and -E in human, that can physically associate with RNP polymerase II to induce transcriptional pausing.","definition_xrefs":["PMID:12612062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"NELF complex","synonyms":[{"name":"negative elongation factor complex","type":"exact"}],"termid":"GO:0032021"}


id: GO:0018486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methyl ethyl ketone + O2 = H2O + ethyl acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-butanone oxidase activity (obsolete GO:0018486)","termid":"GO:0018486"}


id: MONDO:0004655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute megakaryoblastic leukemia (obsolete MONDO:0004655)","termid":"MONDO:0004655","xrefs":{"Monarch":{"xref_id":"0004655"}}}


id: MONDO:0016598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital secondary polycythemia","termid":"MONDO:0016540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"autosomal recessive secondary polycythemia not associated with VHL gene","secondary_identifiers":["Orphanet:247378","GARD:20658"],"synonyms":[{"name":"autosomal recessive secondary erythrocytosis not associated with VHL gene","type":"exact"},{"name":"autosomal recessive secondary erythrocytosis, non-Chuvash type","type":"exact"},{"name":"autosomal recessive secondary polycythemia, non-Chuvash type","type":"exact"}],"termid":"MONDO:0016598","xrefs":{"Monarch":{"xref_id":"0016598"}}}


id: GO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-L-fucoside + H2O = an alcohol + L-fucose.","definition_xrefs":["EC:3.2.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosidase activity","termid":"GO:0015928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"alpha-L-fucosidase activity","secondary_identifiers":["Reactome:R-HSA-5693807","RHEA:12288","MetaCyc:ALPHA-L-FUCOSIDASE-RXN"],"synonyms":[{"name":"alpha-L-fucoside fucohydrolase activity","type":"related"},{"name":"alpha-fucosidase activity","type":"related"}],"termid":"GO:0004560"}


id: PBO:0060050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 38","termid":"PBO:0060050"}


id: PBO:0050379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 3","termid":"PBO:0050379"}


id: PBO:0112984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accessory subunit of DNA polymerase zeta (pol zeta); involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev3p, Pol31p and Pol32p","termid":"PBO:0112984"}


id: PBO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD9 neighbor","termid":"PBO:0042984"}


id: PBO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actin_filament-based_movement","termid":"PBO:0035826"}


id: GO:0048402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the intermediate mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"intermediate mesoderm morphogenesis","termid":"GO:0048390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesoderm structural organization","synonyms":[{"name":"intermediate mesoderm structural organisation","type":"exact"}],"termid":"GO:0048402"}


id: PATO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of not being harmed or injured or spoiled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damage","termid":"PATO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undamaged","termid":"PATO:0001168"}


id: FYPO:0005366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitosis","synonyms":[{"name":"abolished protein phosphorylation during M phase of mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during mitotic M phase","type":"related"},{"name":"protein phosphorylation abolished during mitosis","type":"exact"}],"termid":"FYPO:0005366"}


id: PBO:0068240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal pseudogene 2","termid":"PBO:0068240"}


id: GO:2000241
data:
  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id: PBO:0084830
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id: PBO:0091053
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id: MONDO:0022314
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id: MONDO:0011149
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id: PBO:0050860
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator","termid":"PBO:0050860"}


id: GO:0106290
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id: GO:0060563
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id: PBO:0090358
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id: GO:0034215
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id: PBO:0024477
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id: FYPO:0002492
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id: PBO:0003118
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id: PBO:0051953
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id: PBO:0061120
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id: PBO:0043000
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id: MONDO:0010410
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id: FYPO:0002776
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id: PBO:0039869
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id: PBO:0070751
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id: GO:0043174
data:
  {"annotated_genes":["SJAG_00134","SJAG_02179","SJAG_06634","SJAG_01859","SJAG_04264","SJAG_03881","SJAG_01781","SJAG_01070","SJAG_05029","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98370,98371],"is_not":false,"summary":null,"term":"GO:0043174"},{"annotations":[116646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[69550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[93515,73201,66242,61545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[97512,113617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"}]},"cv_name":"biological_process","definition":"Any process which produces a nucleotide, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide), from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleoside salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0043174","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0043097":null,"GO:0043174":null}}


id: PBO:0086439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative kinase; suppressor of GTPase mutant; similar to bovine rhodopsin kinase; may have a role in intracellular sterol transport","termid":"PBO:0086439"}


id: MONDO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatic veno-occlusive disease (obsolete MONDO:0000887)","termid":"MONDO:0000887","xrefs":{"Monarch":{"xref_id":"0000887"}}}


id: FYPO:0001901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"small P-bodies","termid":"FYPO:0001900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"small P-bodies during vegetative growth","synonyms":[{"name":"decreased P-body formation during vegetative growth","type":"related"},{"name":"small P bodies during vegetative growth","type":"exact"},{"name":"small P-bodies during mitotic cell cycle","type":"related"},{"name":"small P-body during vegetative growth","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies during vegetative growth","type":"exact"}],"termid":"FYPO:0001901"}


id: PBO:0043805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase M","termid":"PBO:0043805"}


id: PBO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 43","termid":"PBO:0044759"}


id: PBO:0108683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp7","termid":"PBO:0108683"}


id: PBO:0054812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2225","termid":"PBO:0054812"}


id: FYPO:0003859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to wortmannin. Cells stop growing (and may die) at a concentration of wortmannin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to wortmannin","synonyms":[{"name":"hypersensitive to wortmannin","type":"exact"},{"name":"sensitive to wortmannin during mitotic cell cycle","type":"related"},{"name":"sensitive to wortmannin during vegetative growth","type":"exact"}],"termid":"FYPO:0003859"}


id: GO:0071996
data:
  {"annotated_genes":["SJAG_01344","SJAG_05213","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95832,96823,118014],"is_not":false,"summary":null,"term":"GO:0071996"}]},"cv_name":"biological_process","definition":"The directed movement of glutathione into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"glutathione transmembrane transport","termid":"GO:0034775"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"glutathione transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione transport into vacuole","type":"exact"}],"termid":"GO:0071996","terms_by_termid":{"GO:0071996":null}}


id: GO:0051922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + cholesterol = adenosine 3',5'-bisphosphate + cholesterol sulfate + H+.","definition_xrefs":["PMID:12730293","RHEA:52368","PMID:12145317","PMID:11416019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol sulfotransferase activity","termid":"GO:0004027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"cholesterol sulfotransferase activity","termid":"GO:0051922"}


id: GO:1901818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-zeacarotene.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:3710717","UniPathway:UPA00805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"beta-zeacarotene metabolic process","termid":"GO:1901816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene biosynthetic process","synonyms":[{"name":"beta-zeacarotene anabolism","type":"exact"},{"name":"beta-zeacarotene biosynthesis","type":"exact"},{"name":"beta-zeacarotene formation","type":"exact"},{"name":"beta-zeacarotene synthesis","type":"exact"}],"termid":"GO:1901818"}


id: PBO:0075552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEG neighbor","termid":"PBO:0075552"}


id: MONDO:0003933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon malignant neoplasm that arises from the chest wall bones. Representative examples include chondrosarcoma, osteosarcoma, and Ewing sarcoma/peripheral primitive neuroectodermal tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chest wall lymphoma","termid":"MONDO:0003985"},{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"malignant neoplasm of chest wall","termid":"MONDO:0021323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chest wall bone cancer","secondary_identifiers":["UMLS:C1334572","NCIT:C6724","DOID:6579","MEDGEN:233148"],"synonyms":[{"name":"bone cancer of chest wall","type":"exact"},{"name":"chest wall bone cancer","type":"exact"},{"name":"malignant bone neoplasm of chest wall","type":"related"},{"name":"malignant bone neoplasm of the chest wall","type":"exact"},{"name":"malignant bone tumor of chest wall","type":"exact"},{"name":"malignant bone tumor of the chest wall","type":"exact"},{"name":"malignant bone tumour of chest wall","type":"exact"},{"name":"malignant bone tumour of the chest wall","type":"exact"},{"name":"malignant chest wall bone neoplasm","type":"exact"},{"name":"malignant chest wall bone tumor","type":"exact"},{"name":"malignant chest wall bone tumour","type":"exact"}],"termid":"MONDO:0003933","xrefs":{"Monarch":{"xref_id":"0003933"}}}


id: PBO:0060090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 37","termid":"PBO:0060090"}


id: RO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and an anatomical entity such that the process contributes to the act of creating the structural organization of the anatomical entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_structural_organization_of","termid":"RO:0002355"}


id: GO:0036315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sterol stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sterol","termid":"GO:0036314"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sterol","termid":"GO:0036315"}


id: PBO:0046731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVX1 antisense RNA","termid":"PBO:0046731"}


id: PBO:0058553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6132","termid":"PBO:0058553"}


id: PBO:0030978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030978"}


id: PBO:0049726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 7","termid":"PBO:0049726"}


id: MONDO:0006366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic polyp that arises from the stomach and is characterized by the presence of smooth muscle branching bands, and hyperplasia with cystic dilatation of the foveolar epithelium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Peutz-Jeghers syndrome","termid":"MONDO:0008280"},{"relation_name":"is_a","term_name":"gastric hamartomatous polyp","termid":"MONDO:0006224"},{"relation_name":"is_a","term_name":"Peutz-Jeghers polyp","termid":"MONDO:0006365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Peutz-Jeghers polyp of the stomach","secondary_identifiers":["NCIT:C36205","MEDGEN:233323","UMLS:C1335398"],"synonyms":[{"name":"Gastric Peutz-Jeghers polyp","type":"exact"}],"termid":"MONDO:0006366","xrefs":{"Monarch":{"xref_id":"0006366"}}}


id: PBO:0041290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1RL antisense RNA 1","termid":"PBO:0041290"}


id: GO:0039630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Generating a movement along a single- or double-stranded RNA molecule, driven by ATP hydrolysis.","definition_xrefs":["PMID:22713318","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on RNA","termid":"GO:0008186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"RNA translocase activity","termid":"GO:0039630"}


id: PR:Q9Y7R4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone-lysine N-methyltransferase SETD1B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-4 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.04c","secondary_identifiers":["UniProtKB:Q9Y7R4"],"synonyms":[{"name":"COMPASS component set1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SET domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC306.04c","type":"related"},{"name":"Set1C component set1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SETD1B","type":"exact"},{"name":"Spset1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kmt2","type":"related"},{"name":"lysine N-methyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"set1 complex component set1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7R4"}


id: GO:0019449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including hypotaurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-cysteine catabolic process to hypotaurine","synonyms":[{"name":"L-cysteine breakdown to hypotaurine","type":"exact"},{"name":"L-cysteine degradation to hypotaurine","type":"exact"}],"termid":"GO:0019449"}


id: GO:1990487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignin in the absence of oxygen. Lignin is a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:mengo_curators","DOI:10.1039/C3EE40932E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin catabolic process","termid":"GO:0046274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"anaerobic lignin catabolic process","synonyms":[{"name":"anaerobic lignin degradation","type":"exact"}],"termid":"GO:1990487"}


id: GO:0009570
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast stroma","termid":"GO:0009570"}


id: GO:0075027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of appressorium initiation (obsolete GO:0075027)","synonyms":[{"name":"positive regulation of appressorium initiation on or near host","type":"related"},{"name":"positive regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075027"}


id: PBO:0054398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1794","termid":"PBO:0054398"}


id: GO:0002944
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin Kand cyclin-dependent kinase 12 (CDK12). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:22012619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin K-CDK12 complex","synonyms":[{"name":"CycK/Cdk12 complex","type":"related"}],"termid":"GO:0002944"}


id: GO:1990341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homotrimeric or homopentameric glycoprotein that functions at the interface of the cell membrane and the extracellular matrix through its interactions with proteins and proteoglycans, such as collagens, integrins and fibronectin, to regulate matrix structure and cellular behaviour.","definition_xrefs":["PMID:18193164","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"thrombospondin complex","termid":"GO:1990341"}


id: PBO:0079517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase pseudogene 1","termid":"PBO:0079517"}


id: MONDO:0019366
data:
  {"annotated_genes":["SJAG_02139","SJAG_04295","SJAG_05182","SJAG_05175","SJAG_04706"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85132,85135,85131,85134,85133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[85116,85120,85119,85118,85117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011449"}]},"cv_name":"mondo","definition":"Free sialic acid storage disease (free SASD), is a group of lysosomal storage diseases characterized by a spectrum of clinical manifestations including neurological and developmental disorders with severity ranging from the milder phenotype, Salla disease (SD), to the most severe phenotype, infantile free sialic acid storage disease (ISSD).","definition_xrefs":["Orphanet:834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysosomal amino acid transport","termid":"MONDO:0019246"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"free sialic acid storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200572","MedDRA:10067531","SCTID:278991002","UMLS:C2931872","MEDGEN:419512","MedDRA:10067529","icd11.foundation:1817428569","NANDO:1200146","GARD:10870","MESH:C538523"],"synonyms":[{"name":"free sialic acid storage disease","type":"exact"}],"termid":"MONDO:0019366","terms_by_termid":{"MONDO:0010027":null,"MONDO:0011449":null},"xrefs":{"Monarch":{"xref_id":"0019366"}}}


id: GO:2001144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:2001144)","termid":"GO:2001144"}


id: PBO:0113758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0113758"}


id: PBO:0078637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 11","termid":"PBO:0078637"}


id: FYECO:0000137
data:
  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id: MONDO:0021123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of malignant tumors arising from the bone and characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. Pain and the presence of a mass are the most common clinical symptoms.","definition_xrefs":["NCIT:C35871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0021038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor of bone","secondary_identifiers":["MEDGEN:272598","UMLS:C1333481"],"synonyms":[{"name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor of bone","type":"exact"},{"name":"Ewing's sarcoma/peripheral primitive neuroectodermal tumor of bone","type":"exact"},{"name":"Ewing's sarcoma/peripheral primitive neuroectodermal tumour of bone","type":"exact"},{"name":"bone tissue Ewing sarcoma/peripheral primitive neuroectodermal tumor","type":"exact"},{"name":"bone tissue Ewing sarcoma/peripheral primitive neuroectodermal tumour","type":"exact"}],"termid":"MONDO:0021123","xrefs":{"Monarch":{"xref_id":"0021123"}}}


id: GO:0018744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: limonene-1,2-epoxide + H2O = limonene-1,2-diol. Other substrates include alicyclic and 1-methyl-substituted epoxides, such as 1-methylcyclohexene oxide, indene oxide and cyclohexene oxide.","definition_xrefs":["EC:3.3.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"limonene-1,2-epoxide hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r0734","MetaCyc:3.3.2.8-RXN","RHEA:10700"],"synonyms":[{"name":"limonene oxide hydrolase activity","type":"related"}],"termid":"GO:0018744"}


id: PBO:0051263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-76-1 (pseudogene)","termid":"PBO:0051263"}


id: GO:0062089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of taurine biosynthesis.","definition_xrefs":["PMID:24911144","GOC:BHF","PMID:18648510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"taurine biosynthetic process","termid":"GO:0042412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of taurine biosynthetic process","termid":"GO:0062089"}


id: PBO:0045329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 7","termid":"PBO:0045329"}


id: PBO:0005437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM checkpoint kinase","termid":"PBO:0005437"}


id: PBO:0029200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_clotrimazole","termid":"PBO:0029200"}


id: MONDO:0007893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multisystem genetic disorder characterized by lentigines, hypertrophic cardiomyopathy, short stature, pectus deformity, and dysmorphic facial features.","definition_xrefs":["Orphanet:500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome with multiple lentigines","secondary_identifiers":["MedDRA:10062901","MESH:D044542","NORD:1360","NCIT:C84820","UMLS:C0175704","SCTID:111306001","DOID:14291","OMIMPS:151100","ICD9:709.09","MEDGEN:104494","GARD:1100"],"synonyms":[{"name":"Capute-Rimoin-Konigsmark-Esterly-Richardson syndrome","type":"exact"},{"name":"Cardiomyopathic lentiginosis","type":"exact"},{"name":"Gorlin syndrome II","type":"exact"},{"name":"LEOPARD syndrome","type":"exact"},{"name":"Moynahan syndrome","type":"related"},{"name":"Noonan syndrome with multiple lentigines","type":"exact"},{"name":"familial multiple lentigines syndrome","type":"exact"},{"name":"generalised lentiginosis","type":"exact"},{"name":"generalized lentiginosis","type":"exact"},{"name":"lentigines, electrocardiographic conduction abnormalities, ocular hypertelorism, pulmonic stenosis, abnormal genitalia, retardation of growth, Deafnes","type":"related"},{"name":"lentigines, electrocardiographic conduction defects, 0cular hypertelorism, pulmonary stenosis, abnormalities of the genitals, retarded Growth, deafness","type":"exact"},{"name":"lentiginosis profusa syndrome","type":"exact"},{"name":"progressive cardiomyopathic lentiginosis","type":"exact"}],"termid":"MONDO:0007893","xrefs":{"Monarch":{"xref_id":"0007893"}}}


id: MONDO:1011859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paresis, non-human animal","secondary_identifiers":["OMIA:000928"],"termid":"MONDO:1011859","xrefs":{"Monarch":{"xref_id":"1011859"}}}


id: MONDO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemorrhagic necrosis that was first demonstrated in rabbits with a two-step reaction, an initial local (intradermal) or general (intravenous) injection of a priming endotoxin (endotoxins) followed by a second intravenous endotoxin injection (provoking agent) 24 h later. The acute inflammation damages the small blood vessels. The following intravascular coagulation leads to capillary and venous thrombosis and necrosis. Shwartzman phenomenon can also occur in other species with a single injection of a provoking agent, and during infections or pregnancy. Its susceptibility depends on the status of immune system, coagulation, fibrinolysis, and blood flow.","definition_xrefs":["MESH:D012790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular hemostatic disease","termid":"MONDO:0003159"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Shwartzman phenomenon","secondary_identifiers":["MEDGEN:48656","DOID:3825","UMLS:C0037018","GARD:7636"],"synonyms":[{"name":"Shwartzman reaction","type":"exact"},{"name":"Shwartzman reaction (function)","type":"exact"}],"termid":"MONDO:0002783","xrefs":{"Monarch":{"xref_id":"0002783"}}}


id: PR:P87126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.11c","synonyms":[{"name":"Spom972h-cwf2","type":"exact"},{"name":"complexed with cdc5 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-processing protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87126"}


id: PBO:0004904
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dominent ataxia SCA28","termid":"PBO:0004904"}


id: FYPO:0006308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are thicker than normal in the medial region of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick actin cables","termid":"FYPO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"thick actin cables in medial region","synonyms":[{"name":"increased actin cable thickness in medial region","type":"exact"},{"name":"thick actin cables in medial region during mitotic cell cycle","type":"related"},{"name":"thick actin cables in medial region during vegetative growth","type":"exact"},{"name":"thick actin cables in medial region of cell","type":"exact"},{"name":"thick formin-nucleated actin cables in medial region","type":"exact"}],"termid":"FYPO:0006308"}


id: PBO:0053123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin like 1","termid":"PBO:0053123"}


id: PBO:0030371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030371"}


id: PBO:0086175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease","termid":"PBO:0086175"}


id: GO:0032263
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75168],"is_not":false,"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"Any process which produces guanosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP biosynthetic process","termid":"GO:0006177"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GMP salvage","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032263","terms_by_termid":{"GO:0032263":null}}


id: PBO:0090092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, 3'-phosphoadenosine 5'-phosphosulfate/ 5'-adenylyl sulfate Mrx21","termid":"PBO:0090092"}


id: GO:0009098
data:
  {"annotated_genes":["SJAG_03243","SJAG_03985","SJAG_02841","SJAG_04149","SJAG_06635","SJAG_04098","SJAG_03562"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59035,74395,76847,79715,90440,103084,113059],"is_not":false,"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-leucine metabolic process","termid":"GO:0006551"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-leucine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:LEUSYN-PWY"],"synonyms":[{"name":"L-leucine anabolism","type":"exact"},{"name":"L-leucine biosynthesis","type":"exact"},{"name":"L-leucine formation","type":"exact"},{"name":"L-leucine synthesis","type":"exact"},{"name":"leucine biosynthetic process","type":"broad"}],"termid":"GO:0009098","terms_by_termid":{"GO:0009098":null}}


id: GO:0045482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + trichodiene.","definition_xrefs":["EC:4.2.3.6","RHEA:12052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"trichodiene synthase activity","secondary_identifiers":["KEGG_REACTION:R02306","MetaCyc:TRICHODIENE-SYNTHASE-RXN"],"synonyms":[{"name":"sesquiterpene cyclase activity","type":"broad"},{"name":"trans,trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, trichodiene-forming)","type":"related"},{"name":"trans,trans-farnesyl-diphosphate sesquiterpenoid-lyase activity","type":"related"},{"name":"trichodiene synthetase activity","type":"related"}],"termid":"GO:0045482"}


id: GO:0005545
data:
  {"annotated_genes":["SJAG_01748","SJAG_01722"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73367,108008],"is_not":false,"summary":null,"term":"GO:0005545"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylinositol, a glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01722":null,"SJAG_01748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"1-phosphatidylinositol binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005545","terms_by_termid":{"GO:0005545":null}}


id: PBO:0080298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 62 pseudogene","termid":"PBO:0080298"}


id: PBO:0044638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping mRNA 1A","termid":"PBO:0044638"}


id: MONDO:0012364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in variation in the chromosome region 7q22.3-q31.1.","definition_xrefs":["DOID:0110442","PMID:16228230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1Q","secondary_identifiers":["GARD:15470","MESH:C563688","UMLS:C1835926","MEDGEN:332088","OMIM:609915"],"synonyms":[{"name":"CMD1Q","type":"exact"},{"name":"cardiomyopathy, dilated, 1Q","type":"related"},{"name":"dilated cardiomyopathy type 1Q","type":"exact"}],"termid":"MONDO:0012364","xrefs":{"Monarch":{"xref_id":"0012364"}}}


id: PBO:0079364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 5, pseudogene","termid":"PBO:0079364"}


id: PBO:0039682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family A member 3","termid":"PBO:0039682"}


id: PBO:0005088
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CSL response element 5'-GTG[G/A]GAA-3'","termid":"PBO:0005088"}


id: FYPO:0008140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal nuclear envelope morpbology in the vegetative growth phase of the life cycle in which the nuclear envelope lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"dilated nuclear envelope lumen","termid":"FYPO:0008140"}


id: PBO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C ortholog Cnp3","termid":"PBO:0018086"}


id: PBO:0116523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_date","termid":"PBO:0116523"}


id: MONDO:0850332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic astrocytoma carrying IDH mutations.","definition_xrefs":["DOID:0080875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic astrocytoma","termid":"MONDO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"IDH-mutant anaplastic astrocytoma","termid":"MONDO:0850332","xrefs":{"Monarch":{"xref_id":"0850332"}}}


id: PBO:0053395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 324","termid":"PBO:0053395"}


id: PBO:0074365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 3","termid":"PBO:0074365"}


id: FYPO:0007365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphoenolpyruvate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphoenolpyruvate level","synonyms":[{"name":"decreased cellular PEP level","type":"exact"},{"name":"decreased cellular phosphoenolpyruvate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphoenolpyruvate level during vegetative growth","type":"exact"},{"name":"decreased level of phosphoenolpyruvate in cell","type":"exact"},{"name":"reduced cellular phosphoenolpyruvate level","type":"exact"}],"termid":"FYPO:0007365"}


id: GO:0140765
data:
  {"annotated_genes":["SJAG_01075","SJAG_04186","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57959,89806,103984],"is_not":false,"summary":null,"term":"GO:0140765"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 56) + NAD+ + H2O = histone H3 L-lysine (position 56) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K56 to NAD, producing nicotinamide.","definition_xrefs":["PMID:23911928","PMID:30374165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0140096","GO:0019213","GO:0016740","GO:0033558"],"is_obsolete":false,"name":"histone H3K56 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H3-K56 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K56 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K56 specific)","type":"exact"}],"termid":"GO:0140765","terms_by_termid":{"GO:0140765":null}}


id: PBO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase Lys3","termid":"PBO:0000430"}


id: PBO:0043713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 1","termid":"PBO:0043713"}


id: PATO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001080 relative work (obsolete PATO:0001080)","termid":"PATO:0001080"}


id: PBO:0053154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 3","termid":"PBO:0053154"}


id: MONDO:0009684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular hypertonia, lethal","secondary_identifiers":["UMLS:C1850827","OMIM:254120","MEDGEN:342600","MESH:C564982"],"synonyms":[{"name":"muscular hypertonia, lethal","type":"exact"}],"termid":"MONDO:0009684","xrefs":{"Monarch":{"xref_id":"0009684"}}}


id: PBO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.24.59","termid":"PBO:0000500"}


id: PBO:0040437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2 pseudogene 2","termid":"PBO:0040437"}


id: GO:0039566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT1 (signal transducer and activator of transcription-1) activity by the removal of phosphoric residues from STAT1-O-phospho-tyrosine to form STAT1-tyrosine. For example, the viral phosphatase VH1 dephosphorylates STAT1 to reverse STAT1 activation.","definition_xrefs":["VZ:282","PMID:11238845","PMID:21362620"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT1 activity by tyrosine dephosphorylation of STAT1 (obsolete GO:0039566)","synonyms":[{"name":"suppression by virus of host STAT1 activity by peptidyl-tyrosine dephosphorylation of STAT1","type":"exact"},{"name":"viral tyrosine phosphatase activity involved in suppression of host STAT1","type":"related"}],"termid":"GO:0039566"}


id: SO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that occurs within a gene but falls outside of all transcript features. This occurs when alternate transcripts of a gene do not share overlapping sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intragenic_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:intragenic_variant","type":"exact"},{"name":"intragenic variant","type":"exact"},{"name":"snpEff:INTRAGENIC","type":"exact"}],"termid":"SO:0002011"}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: PBO:0081230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMYND10 antisense RNA 1","termid":"PBO:0081230"}


id: MONDO:0044335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the soft tissue.","definition_xrefs":["NCIT:C4242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign soft tissue neoplasm","secondary_identifiers":["ICDO:8800/0","UMLS:C0334450","MEDGEN:83151","SCTID:92069005"],"synonyms":[{"name":"benign neoplasm of soft tissue","type":"exact"},{"name":"benign neoplasm of the soft tissue","type":"exact"},{"name":"benign soft tissue neoplasm","type":"exact"},{"name":"benign soft tissue tumor","type":"exact"},{"name":"benign soft tissue tumour","type":"exact"},{"name":"benign tumor of soft tissue","type":"exact"},{"name":"benign tumor of the soft tissue","type":"exact"},{"name":"benign tumour of soft tissue","type":"exact"},{"name":"benign tumour of the soft tissue","type":"exact"},{"name":"soft tissue neoplasm, benign","type":"exact"}],"termid":"MONDO:0044335","xrefs":{"Monarch":{"xref_id":"0044335"}}}


id: PBO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLOCK interacting pacemaker","termid":"PBO:0043172"}


id: PBO:0067983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 285","termid":"PBO:0067983"}


id: PBO:0052622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 1","termid":"PBO:0052622"}


id: GO:0140952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl27-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me2.","definition_xrefs":["RHEA:64452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008276","GO:0003674","GO:0140096","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"histone H3K27 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.371"],"synonyms":[{"name":"histone H3-K27 dimethylase activity","type":"exact"},{"name":"histone H3-K27 dimethylation","type":"broad"},{"name":"histone H3K27 dimethylase activity","type":"exact"},{"name":"histone H3K27 dimethylation","type":"broad"},{"name":"histone H3K27 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140952"}


id: MONDO:0013336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"19p13.13 microdeletion syndrome is a rare partial autosomal monosomy characterized by global developmental delay, moderate intellectual disability, macrocephaly, overgrowth, hypotonia, and facial dysmorphism (frontal bossing, down-slanting palpebral fissures). Other associated features variably include ataxia, seizures, ventriculomegaly, ocular abnormalities (strabismus, optic nerve hypoplasia) and gastrointestinal problems (abdominal pain, vomiting, constipation).","definition_xrefs":["Orphanet:357001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 19","termid":"MONDO:0016897"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19p13.13 deletion syndrome","secondary_identifiers":["SCTID:764440006","UMLS:C3150894","MEDGEN:462244","GARD:17542","DOID:0060426","OMIM:613638"],"synonyms":[{"name":"19p13.13 microdeletion syndrome","type":"related"},{"name":"Del(19)(p13.13)","type":"exact"},{"name":"chromosome 19P13.13 Duplication syndrome","type":"related"},{"name":"chromosome 19p13.13 deletion syndrome","type":"exact"},{"name":"monosomy 19p13.13","type":"exact"}],"termid":"MONDO:0013336","xrefs":{"Monarch":{"xref_id":"0013336"}}}


id: MONDO:0018347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete severe intellectual disability-progressive postnatal microcephaly- midline stereotypic hand movements syndrome (obsolete MONDO:0018347)","termid":"MONDO:0018347","xrefs":{"Monarch":{"xref_id":"0018347"}}}


id: PBO:0038815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 2","termid":"PBO:0038815"}


id: PR:Q10299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA cleavage complex II protein Clp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12755:SF0","PRO:DNx","OMA:SCHPO00989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation factor clp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.05c","secondary_identifiers":["UniProtKB:Q10299"],"synonyms":[{"name":"Spom972h-CLP1","type":"exact"}],"termid":"PR:Q10299"}


id: GO:0048029
data:
  {"annotated_genes":["SJAG_04571","SJAG_02839","SJAG_04495","SJAG_03535","SJAG_04334","SJAG_01991","SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69779],"is_not":false,"summary":null,"term":"GO:0048029"},{"annotations":[57174,64287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005536"},{"annotations":[113569,79043,118327,110545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005537"}]},"cv_name":"molecular_function","definition":"Binding to a monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"},{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00839":null,"SJAG_01991":null,"SJAG_02839":null,"SJAG_03535":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"monosaccharide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048029","terms_by_termid":{"GO:0005536":null,"GO:0005537":null,"GO:0048029":null}}


id: GO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of a MAP kinase kinase in the context of sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK during sporulation (sensu Saccharomyces) (obsolete GO:0000204)","synonyms":[{"name":"activation of MAPKK during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000204"}


id: PBO:0109075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like (pseudogene)","termid":"PBO:0109075"}


id: PBO:0063923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 2","termid":"PBO:0063923"}


id: PBO:0043660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q5, methyltransferase","termid":"PBO:0043660"}


id: MONDO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fractures of the larger bone of the forearm.","definition_xrefs":["MESH:D014458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulna fracture","secondary_identifiers":["SCTID:54556006","EFO:0003950"],"synonyms":[{"name":"bone fracture of ulna","type":"exact"},{"name":"ulna bone fracture","type":"exact"}],"termid":"MONDO:0005322","xrefs":{"Monarch":{"xref_id":"0005322"}}}


id: PBO:0068423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl aminopeptidase like 1","termid":"PBO:0068423"}


id: PBO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementing genes are not orthologous","termid":"PBO:0001003"}


id: PBO:0063120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 4 pseudogene 2","termid":"PBO:0063120"}


id: FYPO:0000065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 5-azacytidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to 5-azacytidine","synonyms":[{"name":"resistance to 5-azacytidine during mitotic cell cycle","type":"related"},{"name":"resistance to 5-azacytidine during vegetative growth","type":"exact"},{"name":"resistant to 5-azacytidine","type":"exact"}],"termid":"FYPO:0000065"}


id: FYPO:0003283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of copper ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal copper import","synonyms":[{"name":"abnormal cellular copper import","type":"exact"},{"name":"abnormal copper cation import","type":"exact"},{"name":"abnormal copper import during mitotic cell cycle","type":"related"},{"name":"abnormal copper import during vegetative growth","type":"exact"},{"name":"abnormal copper import into cell","type":"exact"},{"name":"abnormal copper ion import","type":"exact"},{"name":"abnormal copper ion import across plasma membrane","type":"exact"}],"termid":"FYPO:0003283"}


id: PR:O60188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp6 gene.","definition_xrefs":["UniProtKB:O60188","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC244.02c","synonyms":[{"name":"Spom972h-utp6","type":"exact"},{"name":"U3 snoRNA-associated protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60188"}


id: PBO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.3","termid":"PBO:0000913"}


id: GO:0016594
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73939],"is_not":false,"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to glycine, aminoethanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glycine binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Gly binding","type":"exact"},{"name":"aminoacetic acid binding","type":"exact"},{"name":"aminoethanoic acid binding","type":"exact"}],"termid":"GO:0016594","terms_by_termid":{"GO:0016594":null}}


id: PBO:0046084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 9","termid":"PBO:0046084"}


id: PBO:0076104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 8 pseudogene 1","termid":"PBO:0076104"}


id: PBO:0049257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G0/G1 switch 2","termid":"PBO:0049257"}


id: SO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repetitive element that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_repetitive_element","synonyms":[{"name":"engineered foreign repetitive element","type":"exact"}],"termid":"SO:0000293"}


id: PBO:0111819
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PQ loop","termid":"PBO:0111819"}


id: MONDO:0020034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of respiratory tract neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare respiratory tract neoplasm (obsolete MONDO:0020034)","secondary_identifiers":["Orphanet:98060"],"synonyms":[{"name":"rare respiratory cancer","type":"narrow"},{"name":"rare respiratory neoplasm","type":"exact"},{"name":"rare respiratory tract neoplasm","type":"exact"},{"name":"rare respiratory tumor","type":"exact"}],"termid":"MONDO:0020034","xrefs":{"Monarch":{"xref_id":"0020034"}}}


id: GO:0043462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of an ATP-dependent activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ATP-dependent activity","synonyms":[{"name":"regulation of ATPase activity","type":"exact"},{"name":"regulation of adenosinetriphosphatase activity","type":"exact"}],"termid":"GO:0043462"}


id: PBO:0063987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 21","termid":"PBO:0063987"}


id: GO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct ossification","termid":"GO:0036072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous ossification","secondary_identifiers":["Wikipedia:Intramembranous_ossification"],"synonyms":[{"name":"dermal ossification","type":"narrow"},{"name":"intramembranous bone ossification","type":"related"}],"termid":"GO:0001957"}


id: PBO:0028640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spore_population","termid":"PBO:0028640"}


id: GO:0046411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which 2-keto-3-deoxygluconate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"2-keto-3-deoxygluconate transmembrane transport","synonyms":[{"name":"2-keto-3-deoxygluconate transport","type":"related"}],"termid":"GO:0046411"}


id: SO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 1 base long that is included as part of two separate codons during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_translational_frameshift","synonyms":[{"name":"minus 1 ribosomal frameshift","type":"exact"},{"name":"minus 1 ribosomal slippage","type":"exact"},{"name":"minus 1 translational frameshift","type":"exact"}],"termid":"SO:0002329"}


id: GO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amphetamine","termid":"GO:0001975"}


id: PBO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11 (predicted)","termid":"PBO:0001822"}


id: PBO:0087095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L9B; homologous to mammalian ribosomal protein L9 and bacterial L6; RPL9B has a paralog, RPL9A, that arose from a single-locus duplication","termid":"PBO:0087095"}


id: GO:2000762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenylpropanoid metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of phenylpropanoid metabolic process","synonyms":[{"name":"regulation of phenylpropanoid metabolism","type":"exact"}],"termid":"GO:2000762"}


id: MONDO:0010568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aicardi syndrome is a rare neurodevelopmental disorder defined by the triad of agenesis of the corpus callosum (total or partial), typical chorioretinal lacunae and infantile spasms that affect almost exclusively females.","definition_xrefs":["Orphanet:50"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic developmental defect of the eye (obsolete MONDO:0015218)","termid":"MONDO:0015218"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Aicardi syndrome","secondary_identifiers":["MedDRA:10054935","NORD:745","MESH:D058540","NANDO:1200562","GARD:5764","NCIT:C35256","SCTID:80651009","UMLS:C0175713","DOID:8461","icd11.foundation:2057245946","MEDGEN:61236","OMIM:304050"],"synonyms":[{"name":"AIC","type":"exact"},{"name":"Aicardi syndrome","type":"exact"},{"name":"Aicardi syndrome, X-linked dominant","type":"exact"},{"name":"Aicardi’s syndrome","type":"exact"},{"name":"agenesis of corpus callosum with chorioretinal abnormality","type":"exact"},{"name":"corpus callosum agenesis of with chorioretinal abnormality","type":"exact"},{"name":"corpus callosum, agenesis of, with chorioretinal abnormality","type":"exact"}],"termid":"MONDO:0010568","xrefs":{"Monarch":{"xref_id":"0010568"}}}


id: MONDO:0008709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrocephalopolydactyly, also known as Elejalde syndrome, is an extremely rare lethal autosomal recessive disorder characterized by massive birth weight, swollen globular body, generalized edema, short limbs, postaxial polydactyly, thick skin, facial dysmorphism (slanted palpebral fissures, hypertelorism, epicanthic folds, dysplastic ears), excessive connective tissue, renal dysplasia, and in some patients, organomegaly, craniosynostosis with acrocephaly, omphalocele, cleft palate, and cryptorchidism. Fewer than 10 cases have been reported to date.","definition_xrefs":["Orphanet:221054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrocephalopolydactyly","secondary_identifiers":["SCTID:720417003","OMIM:200995","MEDGEN:501209","UMLS:C3495588","GARD:2096","icd11.foundation:1177551296","MESH:C573722"],"synonyms":[{"name":"Elejalde syndrome","type":"exact"},{"name":"acrocephalopolydactylous dysplasia","type":"exact"}],"termid":"MONDO:0008709","xrefs":{"Monarch":{"xref_id":"0008709"}}}


id: GO:0016715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced ascorbate and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.17.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}


id: MONDO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete natural killer cell leukemia (obsolete MONDO:0001010)","termid":"MONDO:0001010","xrefs":{"Monarch":{"xref_id":"0001010"}}}


id: GO:0097272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of an internal steady state of ammonium.","definition_xrefs":["GOC:yaf","PMID:12695560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"ammonium homeostasis","synonyms":[{"name":"ammonia homeostasis","type":"exact"}],"termid":"GO:0097272"}


id: MONDO:0016644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Logopenic progressive aphasia (lv-PPA) is a form of primary progressive aphasia (PPA), characterized by impaired single-word retrieval and naming and impaired repetition with spared single-word comprehension and object knowledge.","definition_xrefs":["Orphanet:250831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary progressive aphasia","termid":"MONDO:0019806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"logopenic progressive aphasia","secondary_identifiers":["DOID:0081389","SCTID:716380002","MEDGEN:907332","GARD:10791","UMLS:C4274665"],"synonyms":[{"name":"LPA","type":"exact"},{"name":"Logopenic primary progressive aphasia","type":"exact"},{"name":"Logopenic variant PPA","type":"exact"}],"termid":"MONDO:0016644","xrefs":{"Monarch":{"xref_id":"0016644"}}}


id: PR:O60110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER membrane protein complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein oca3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.01c","secondary_identifiers":["UniProtKB:O60110"],"synonyms":[{"name":"Spom972h-EMC2","type":"exact"},{"name":"overexpression-mediated cell cycle arrest protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60110"}


id: PBO:0057749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1908","termid":"PBO:0057749"}


id: PBO:0003262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 family phosphatase Ibp1","termid":"PBO:0003262"}


id: FYPO:0001179
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[119032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119033,119021,119022,119029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a place where it is normally found in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03892":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892","SJAG_01143","SJAG_02392"],"name":"abolished protein localization during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation during vegetative growth","type":"exact"},{"name":"abolished protein localization during mitotic cell cycle","type":"related"},{"name":"protein absent from specific location in cell during vegetative growth","type":"related"},{"name":"protein localization abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001179","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001132":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: GO:0039652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus initiates, promotes, or enhances an NF-kappaB signaling cascade in its host organism.","definition_xrefs":["PMID:7845680","PMID:11907233"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host NF-kappaB cascade (obsolete GO:0039652)","synonyms":[{"name":"activation by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039652"}


id: PBO:0086538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YBR027C is not an essential gene","termid":"PBO:0086538"}


id: PBO:0054469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1868","termid":"PBO:0054469"}


id: PBO:0066833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 132","termid":"PBO:0066833"}


id: PBO:0030906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_vegetative_growth","termid":"PBO:0030906"}


id: PBO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein (predicted)","termid":"PBO:0001225"}


id: GO:1903172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of carbon dioxide at the level of the cell.","definition_xrefs":["PMID:16571594","GO_REF:0000072","GOC:TermGenie","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbon dioxide homeostasis (obsolete GO:1903172)","termid":"GO:1903172"}


id: FYPO:0006781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of Rbin-1 than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to Rbin-1","synonyms":[{"name":"resistance to Rbin-1 during mitotic cell cycle","type":"related"},{"name":"resistance to Rbin-1 during vegetative growth","type":"exact"},{"name":"resistance to ribozinoindole-1","type":"exact"},{"name":"resistant to Rbin-1","type":"exact"}],"termid":"FYPO:0006781"}


id: PBO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 41","termid":"PBO:0061381"}


id: PBO:0003263
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"itty bitty phosphatase","termid":"PBO:0003263"}


id: PBO:0018141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L20, Mrpl20 (predicted)","termid":"PBO:0018141"}


id: PBO:0003328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp10 (predicted)","termid":"PBO:0003328"}


id: PBO:0072374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27a","termid":"PBO:0072374"}


id: PBO:0065787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1","termid":"PBO:0065787"}


id: PBO:0034502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_telomere","termid":"PBO:0034502"}


id: PATO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000339 gametophytic compatability value (obsolete PATO:0000339)","termid":"PATO:0000339"}


id: PBO:0034358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-correlated_with","termid":"PBO:0034358"}


id: GO:0043009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate embryonic development","termid":"GO:0043009"}


id: PBO:0086818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YML119W is not an essential gene; potential Cdc28p substrate","termid":"PBO:0086818"}


id: FYPO:0008173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 8 of histone H4 in silent mating-type cassettes occurs to a higher extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K8 acetylation during vegetative growth","termid":"FYPO:0005308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H4-K8 acetylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008173"}


id: GO:0035224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the genital disc. An anterior and posterior compartment form in each of the three genital disc primoridia (the female genital disc primordium, the male genital disc primordium and the anal primordium).","definition_xrefs":["PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"genital disc pattern formation","termid":"GO:0035221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc anterior/posterior pattern formation","termid":"GO:0035224"}


id: GO:0070850
data:
  {"annotated_genes":["SJAG_02761","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100164,118468],"is_not":false,"summary":null,"term":"GO:0070850"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the transforming acidic coiled coil (TACC) protein and the TOG protein (Mia1p/Alp7p and Alp14, respectively, in fission yeast), and is involved in microtubule array remodeling as cells progress through the cell cycle. The TACC/TOG complex is conserved in eukaryotes, associates with microtubules, and shuttles between the nucleus and the cytoplasm during interphase.","definition_xrefs":["GOC:mah","GOC:vw","PMID:19606211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TACC/TOG complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070850","terms_by_termid":{"GO:0070850":null}}


id: PBO:0005210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase Lig4","termid":"PBO:0005210"}


id: MONDO:0030032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromosome 17q11.2 duplication syndrome, 1.4-mb (obsolete MONDO:0030032)","synonyms":[{"name":"chromosome 17q11.2 duplication syndrome, 1.4-mb, isolated cases","type":"exact"}],"termid":"MONDO:0030032","xrefs":{"Monarch":{"xref_id":"0030032"}}}


id: GO:0046125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"deoxyribonucleoside metabolic process","termid":"GO:0009120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside metabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside metabolism","type":"exact"}],"termid":"GO:0046125"}


id: PR:O13699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug132 gene.","definition_xrefs":["UniProtKB:O13699","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 132 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.06c","synonyms":[{"name":"Spom972h-mug132","type":"exact"}],"termid":"PR:O13699"}


id: SO:1000123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000123 polypeptide_post_translational_processing_affected (obsolete SO:1000123)","synonyms":[{"name":"polypeptide_post-translational_processing_affected","type":"related"}],"termid":"SO:1000123"}


id: GO:1901446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to propan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"is_a","term_name":"regulation of response to propan-1-ol","termid":"GO:1901445"},{"relation_name":"negatively_regulates","term_name":"response to propan-1-ol","termid":"GO:1901427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to propan-1-ol","synonyms":[{"name":"down regulation of response to propan-1-ol","type":"exact"},{"name":"down-regulation of response to propan-1-ol","type":"exact"},{"name":"downregulation of response to propan-1-ol","type":"exact"},{"name":"inhibition of response to propan-1-ol","type":"narrow"}],"termid":"GO:1901446"}


id: GO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.","definition_xrefs":["Wikipedia:XY_sex-determination_system","ISBN:0582227089","PMID:20622855","GOC:mah","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"X chromosome","secondary_identifiers":["Wikipedia:X_chromosome"],"termid":"GO:0000805"}


id: PBO:0083316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF GAT1/YFL021W","termid":"PBO:0083316"}


id: GO:1904901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myosin II filament organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22761445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"positive regulation of myosin II filament organization","synonyms":[{"name":"activation of myosin II filament assembly or disassembly","type":"related"},{"name":"activation of myosin II filament organisation","type":"narrow"},{"name":"activation of myosin II filament organization","type":"narrow"},{"name":"activation of myosin II polymerization or depolymerization","type":"related"},{"name":"positive regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"positive regulation of myosin II filament organisation","type":"exact"},{"name":"positive regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"up regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"up regulation of myosin II filament organisation","type":"exact"},{"name":"up regulation of myosin II filament organization","type":"exact"},{"name":"up regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"up-regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"up-regulation of myosin II filament organisation","type":"exact"},{"name":"up-regulation of myosin II filament organization","type":"exact"},{"name":"up-regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"upregulation of myosin II filament assembly or disassembly","type":"related"},{"name":"upregulation of myosin II filament organisation","type":"exact"},{"name":"upregulation of myosin II filament organization","type":"exact"},{"name":"upregulation of myosin II polymerization or depolymerization","type":"related"}],"termid":"GO:1904901"}


id: GO:0043875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxobutanoate + coenzyme A = propionyl-CoA + formate.","definition_xrefs":["RHEA:28054","PMID:9484901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"2-ketobutyrate formate-lyase activity","secondary_identifiers":["MetaCyc:KETOBUTFORMLY-RXN"],"synonyms":[{"name":"KFL","type":"exact"},{"name":"TdcE","type":"related"},{"name":"keto-acid formate acetyltransferase","type":"broad"}],"termid":"GO:0043875"}


id: GO:0018765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z,4E)-2-hydroxy-6-oxohepta-2,4-dienoate + H2O = (2Z)-2-hydroxypenta-2,4-dienoate + acetate + H+.","definition_xrefs":["RHEA:59220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2-hydroxy-6-oxohepta-2,4-dienoate hydrolase activity","secondary_identifiers":["MetaCyc:2-OH-6-OXOHEPTA-2-4-DIENOATE-HYDR-RXN","EC:3.7.1.25","UM-BBD_reactionID:r0263"],"termid":"GO:0018765"}


id: PBO:0070378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 4","termid":"PBO:0070378"}


id: _global:started_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is strted_by Y if Y is part_of X and X and Y share a 5' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"started_by","termid":"_global:started_by"}


id: FYPO:0003734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alcohol dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal alcohol dehydrogenase activity","termid":"FYPO:0003733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased alcohol dehydrogenase activity","synonyms":[{"name":"decreased alcohol dehydrogenase (NAD) activity","type":"exact"},{"name":"reduced alcohol dehydrogenase activity","type":"exact"}],"termid":"FYPO:0003734"}


id: GO:0072096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the frequency, rate or extent of branch elongation involved in ureteric bud branching, the growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072095"},{"relation_name":"negatively_regulates","term_name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072096"}


id: GO:0061584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell or a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"orexin secretion","synonyms":[{"name":"hypocretin secretion","type":"exact"}],"termid":"GO:0061584"}


id: MONDO:0017341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"virus associated tumor","secondary_identifiers":["Orphanet:289635","GARD:21145","MEDGEN:1842723","UMLS:C5681008"],"termid":"MONDO:0017341","xrefs":{"Monarch":{"xref_id":"0017341"}}}


id: PBO:0072998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCN1A and SCN9A antisense RNA 1","termid":"PBO:0072998"}


id: MONDO:0012536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the CRTAP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 7","secondary_identifiers":["SCTID:254111008","UMLS:C1853162","GARD:8701","DOID:0110337","OMIM:610682","MEDGEN:343981"],"synonyms":[{"name":"CRTAP osteogenesis imperfecta","type":"exact"},{"name":"OI type 7","type":"related"},{"name":"OI type VII","type":"related"},{"name":"OI, type 7","type":"related"},{"name":"OI7","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in CRTAP","type":"exact"},{"name":"osteogenesis imperfecta type 7","type":"exact"},{"name":"osteogenesis imperfecta type VII","type":"exact"},{"name":"osteogenesis imperfecta, type 7","type":"related"},{"name":"osteogenesis imperfecta, type IIb","type":"related"},{"name":"osteogenesis imperfecta, type IIb, formerly","type":"related"},{"name":"osteogenesis imperfecta, type VII","type":"related"}],"termid":"MONDO:0012536","xrefs":{"Monarch":{"xref_id":"0012536"}}}


id: MONDO:0957919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lui-Jee-Baron syndrome","secondary_identifiers":["UMLS:C5882664","MEDGEN:1849943","OMIM:301114"],"termid":"MONDO:0957919","xrefs":{"Monarch":{"xref_id":"0957919"}}}


id: MONDO:0016068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrochondrogenesis is a rare, neonatally lethal, rhizomelic chondrodysplasia. Eleven cases have been reported. The face is distinctive and characterized by protuberant eyes, flat midface, flat small nose with anteverted nares and a small mouth with long upper lip. Cleft palate, micrognathia and bifid tongue can occur. The limbs show marked shortness of all segments with relatively normal hands and feet. No internal anomalies other than omphalocele have been reported. Transmission is probably autosomal recessive. Recurrence in a consanguineous family (affecting both sexes) and concordance of affected male twins have been reported.","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibrochondrogenesis","secondary_identifiers":["icd11.foundation:1412541453","DOID:0060465","MESH:C562524","NANDO:2201016","SCTID:17144009","GARD:2321","UMLS:C0265282","OMIMPS:228520","MEDGEN:82700","Orphanet:2021"],"termid":"MONDO:0016068","xrefs":{"Monarch":{"xref_id":"0016068"}}}


id: GO:0035483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["GOC:cy","ISBN:9781416032458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric motility","termid":"GO:0035482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric emptying","termid":"GO:0035483"}


id: GO:0047378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycerol + H2O = 1-alkyl-sn-glycerol + acetate + H+.","definition_xrefs":["EC:3.1.1.71","RHEA:11552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"acetylalkylglycerol acetylhydrolase activity","secondary_identifiers":["KEGG_REACTION:R04043","MetaCyc:3.1.1.71-RXN"],"synonyms":[{"name":"2-acetyl-1-alkyl-sn-glycerol acetylhydrolase activity","type":"related"},{"name":"alkylacetylglycerol acetylhydrolase activity","type":"related"}],"termid":"GO:0047378"}


