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id: PBO:0036329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase, prune (predicted)","termid":"PBO:0036329"}


id: GO:0016941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a natriuretic peptide and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"natriuretic peptide receptor activity","termid":"GO:0016941"}


id: GO:0035174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group to a serine residue of a histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone serine kinase activity (obsolete GO:0035174)","synonyms":[{"name":"histone-serine kinase activity","type":"exact"}],"termid":"GO:0035174"}


id: MONDO:1011286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leber hereditary optic neuropathy that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber hereditary optic neuropathy, non-human animal","termid":"MONDO:1010358"},{"relation_name":"is_a","term_name":"dilated cardiomyopathy, cattle","termid":"MONDO:1010451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leber hereditary optic neuropathy, cattle","secondary_identifiers":["OMIA:002557-9913"],"termid":"MONDO:1011286","xrefs":{"Monarch":{"xref_id":"1011286"}}}


id: GO:0010799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"}


id: PBO:0041789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZA1 pseudogene 2","termid":"PBO:0041789"}


id: GO:1990037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The center portion of a Lewy body. In Parkinson's disease, it contains a matted meshwork of filaments.","definition_xrefs":["NIF_Subcellular:sao6587439252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body core","termid":"GO:1990037"}


id: PBO:0003637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR95","termid":"PBO:0003637"}


id: MONDO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tendinitis that involves the patella.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"patellar tendinitis","secondary_identifiers":["SCTID:37785001","ICD10CM:M76.5","DOID:10471","UMLS:C0158317","icd11.foundation:1366847963","ICD9:726.64","MEDGEN:510513"],"synonyms":[{"name":"patella tendinitis","type":"exact"},{"name":"patellar tendonitis","type":"exact"},{"name":"tendinitis of patella","type":"exact"}],"termid":"MONDO:0001042","xrefs":{"Monarch":{"xref_id":"0001042"}}}


id: PBO:0063568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase C","termid":"PBO:0063568"}


id: GO:0043211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of carbohydrates and their derivatives across a membrane.","definition_xrefs":["EC:7.5.2.-","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type carbohydrate transporter activity","synonyms":[{"name":"ATP-dependent carbohydrate transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled carbohydrate transmembrane transporter activity","type":"broad"},{"name":"carbohydrate ABC transporter","type":"narrow"},{"name":"carbohydrate-transporting ATPase activity","type":"exact"}],"termid":"GO:0043211"}


id: PBO:0061173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 3-1","termid":"PBO:0061173"}


id: GO:1905819
data:
  {"annotated_genes":["SJAG_04699","SJAG_03681","SJAG_04126","SJAG_01082","SJAG_04259","SJAG_00460","SJAG_03327","SJAG_01837","SJAG_02336","SJAG_00883","SJAG_01679","SJAG_01330","SJAG_04999","SJAG_01297","SJAG_04884","SJAG_02451","SJAG_03353","SJAG_02169","SJAG_03126","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108054,107032,90477,103681,114072,113584,115709,99376,111757],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[114302,106115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[75000,116477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[101586,99220,114305,106117,109708,115363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[98479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[103068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[93959],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[113589],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[116484],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101124],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromosome separation.","definition_xrefs":["GO_REF:0000058","GOC:bhm","PMID:21795393","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chromosome segregation","termid":"GO:0051985"},{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"negatively_regulates","term_name":"chromosome separation","termid":"GO:0051304"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromosome separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromatid release","type":"related"},{"name":"down regulation of chromosome separation","type":"exact"},{"name":"down regulation of rDNA separation","type":"narrow"},{"name":"down-regulation of chromatid release","type":"related"},{"name":"down-regulation of chromosome separation","type":"exact"},{"name":"down-regulation of rDNA separation","type":"narrow"},{"name":"downregulation of chromatid release","type":"related"},{"name":"downregulation of chromosome separation","type":"exact"},{"name":"downregulation of rDNA separation","type":"narrow"},{"name":"inhibition of chromatid release","type":"related"},{"name":"inhibition of chromosome separation","type":"narrow"},{"name":"inhibition of rDNA separation","type":"narrow"},{"name":"negative regulation of chromatid release","type":"related"},{"name":"negative regulation of rDNA separation","type":"narrow"}],"termid":"GO:1905819","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:2000816":null}}


id: GO:0140986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a chemorepellent binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. cytoskeleton reorganization.","definition_xrefs":["PMID:30462573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled chemorepellent receptor signaling pathway","termid":"GO:0140986"}


id: PBO:0040358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 7","termid":"PBO:0040358"}


id: PBO:0038365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_primary_substance_added","termid":"PBO:0038365"}


id: PBO:0064338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid transfer protein","termid":"PBO:0064338"}


id: GO:1990517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a protein is transported to, or maintained in, a location within a photoreceptor outer segment, which is a portion of a modified sensory cilium.","definition_xrefs":["GOC:krc","PMID:20212494"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to photoreceptor outer segment (obsolete GO:1990517)","termid":"GO:1990517"}


id: GO:0106054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: uridine34 in tRNA + a [TusE sulfur carrier protein]-S-sulfanylcysteine + ATP + a reduced electron acceptor = a 2-thiouridine34 in tRNA + a [TusE sulfur carrier protein]-L-cysteine + AMP + an oxidized electron acceptor + diphosphate + H+.","definition_xrefs":["PMID:12549933","PMID:16387657"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA-uracil-34 sulfurtransferase activity (obsolete GO:0106054)","synonyms":[{"name":"tRNA U34 2-thiouridylase","type":"exact"},{"name":"tRNA U34 thiol-transferase activity","type":"exact"},{"name":"tRNA-specific 2-thiouridylase","type":"related"}],"termid":"GO:0106054"}


id: MONDO:0003925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the ciliated respiratory mucosa that lines the ethmoid sinus. It results from the invagination and proliferation of epithelial cells in the underlying stroma.","definition_xrefs":["NCIT:C6843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted papilloma","termid":"MONDO:0002537"},{"relation_name":"is_a","term_name":"ethmoid sinus Schneiderian papilloma","termid":"MONDO:0003923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethmoid sinus inverted papilloma","secondary_identifiers":["UMLS:C1333474","DOID:6562","MEDGEN:232472"],"synonyms":[{"name":"ethmoid sinus inverted papilloma","type":"exact"},{"name":"inverted papilloma of ethmoid sinus","type":"exact"},{"name":"inverted papilloma of the ethmoid sinus","type":"exact"}],"termid":"MONDO:0003925","xrefs":{"Monarch":{"xref_id":"0003925"}}}


id: PBO:0086103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for antifungal drug ciclopirox olamine resistance; not related to the subtelomerically-encoded COS family; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086103"}


id: PBO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_methyltransferase_activity","termid":"PBO:0035940"}


id: MONDO:0011087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 12p13.2-q24.1.","definition_xrefs":["PMID:8841195","DOID:0110900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 2","secondary_identifiers":["MEDGEN:321934","OMIM:601458","UMLS:C1832321","MESH:C563310"],"synonyms":[{"name":"IBD2","type":"exact"},{"name":"inflammatory bowel disease 2","type":"exact"},{"name":"inflammatory bowel disease type 2","type":"exact"}],"termid":"MONDO:0011087","xrefs":{"Monarch":{"xref_id":"0011087"}}}


id: GO:0043953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which folded proteins are transported across cytoplasmic membranes of bacteria and membranes of organelles derived from bacteria (chloroplasts and mitochondria) by the TAT complex.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein transport by the Tat complex","synonyms":[{"name":"protein secretion by the TAT complex","type":"narrow"},{"name":"protein translocation by the TAT complex","type":"narrow"},{"name":"protein translocation by the twin-arginine translocation complex","type":"narrow"},{"name":"twin-arginine translocation pathway","type":"exact"}],"termid":"GO:0043953"}


id: PBO:0075492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 2, pseudogene","termid":"PBO:0075492"}


id: PBO:0050898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha inducible protein 6","termid":"PBO:0050898"}


id: PBO:0072116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 5","termid":"PBO:0072116"}


id: PBO:0024796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-part_of_structure_that_is_capable_of","termid":"PBO:0024796"}


id: PBO:0063659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4","termid":"PBO:0063659"}


id: MONDO:0019358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy due to sulfite oxidase deficiency is a rare neurometabolic disorder characterized by seizures, progressive encephalopathy and lens dislocation.","definition_xrefs":["Orphanet:833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn disorder of methionine cycle and sulfur amino acid metabolism","termid":"MONDO:0019222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"encephalopathy due to sulfite oxidase deficiency","secondary_identifiers":["SCTID:715980003","MEDGEN:894927","GARD:16549","icd11.foundation:681037681","UMLS:C4275019"],"termid":"MONDO:0019358","xrefs":{"Monarch":{"xref_id":"0019358"}}}


id: MONDO:1011696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatocytosis and gastrits, non-human animal","secondary_identifiers":["OMIA:001178"],"termid":"MONDO:1011696","xrefs":{"Monarch":{"xref_id":"1011696"}}}


id: PBO:0028022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_polymerase_activity","termid":"PBO:0028022"}


id: PBO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp1","termid":"PBO:0000928"}


id: PBO:0030992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_positioning","termid":"PBO:0030992"}


id: PBO:0043267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 34","termid":"PBO:0043267"}


id: GO:1903394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to kinetochore that is involved in kinetochore assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:15369671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"},{"relation_name":"part_of","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0051179","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein localization to kinetochore involved in kinetochore assembly","synonyms":[{"name":"condensin localization to kinetochore involved in centromere and kinetochore complex maturation","type":"narrow"},{"name":"condensin localization to kinetochore involved in centromere/kinetochore complex maturation","type":"narrow"},{"name":"condensin localization to kinetochore involved in chromosome-kinetochore attachment","type":"narrow"},{"name":"condensin localization to kinetochore involved in kinetochore assembly","type":"narrow"},{"name":"condensin localization to kinetochore involved in kinetochore formation","type":"related"},{"name":"protein localisation to kinetochore involved in centromere and kinetochore complex maturation","type":"narrow"},{"name":"protein localisation to kinetochore involved in centromere/kinetochore complex maturation","type":"narrow"},{"name":"protein localisation to kinetochore involved in chromosome-kinetochore attachment","type":"narrow"},{"name":"protein localisation to kinetochore involved in kinetochore assembly","type":"exact"},{"name":"protein localisation to kinetochore involved in kinetochore formation","type":"related"},{"name":"protein localization to kinetochore involved in centromere and kinetochore complex maturation","type":"narrow"},{"name":"protein localization to kinetochore involved in centromere/kinetochore complex maturation","type":"narrow"},{"name":"protein localization to kinetochore involved in chromosome-kinetochore attachment","type":"narrow"},{"name":"protein localization to kinetochore involved in kinetochore formation","type":"related"}],"termid":"GO:1903394"}


id: FYPO:0003153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during cellular response to heat","synonyms":[{"name":"normal protein accumulation during cellular response to heat","type":"related"},{"name":"normal protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003153"}


id: PBO:0065445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC3 interacting protein","termid":"PBO:0065445"}


id: GO:0106431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N6-methyl-(d)ATP + H2O = N6-methyl-(d)AMP + diphosphate + H+.","definition_xrefs":["PMID:32144205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N6-methyl-(d)ATP hydrolase activity","termid":"GO:0106431"}


id: PBO:0085931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data","termid":"PBO:0085931"}


id: PBO:0079278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 2","termid":"PBO:0079278"}


id: PBO:0071776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 4","termid":"PBO:0071776"}


id: MONDO:0800351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 5","secondary_identifiers":["MEDGEN:462040","UMLS:C3150690"],"synonyms":[{"name":"LVNC5","type":"exact"}],"termid":"MONDO:0800351","xrefs":{"Monarch":{"xref_id":"0800351"}}}


id: MONDO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the peritoneum","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneum cancer","secondary_identifiers":["SCTID:363492001","UMLS:C0153467","NCIT:C3538","DOID:1725","ICD9:158.9","MEDGEN:102270","ICD9:159.8","ICD9:158.8"],"synonyms":[{"name":"cancer of peritoneum","type":"exact"},{"name":"cancer of the peritoneum","type":"exact"},{"name":"malignant neoplasm of peritoneum","type":"exact"},{"name":"malignant peritoneal neoplasm","type":"exact"},{"name":"malignant peritoneum neoplasm","type":"exact"},{"name":"peritoneal cancer","type":"exact"},{"name":"peritoneal cavity cancer","type":"exact"},{"name":"peritoneal neoplasm","type":"related"},{"name":"peritoneum cancer","type":"exact"}],"termid":"MONDO:0002087","xrefs":{"Monarch":{"xref_id":"0002087"}}}


id: GO:0061864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of molecules that form the basement membrane, including carbohydrates and glycoproteins by a cell.","definition_xrefs":["PMID:28228250","PMID:26610918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"basement membrane constituent secretion","termid":"GO:0061864"}


id: GO:0050150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + H+ = catechol + CO2.","definition_xrefs":["RHEA:21492","EC:4.1.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"o-pyrocatechuate decarboxylase activity","secondary_identifiers":["GO:0018790","MetaCyc:O-PYROCATECHUATE-DECARBOXYLASE-RXN","UM-BBD_reactionID:r0579","KEGG_REACTION:R00821"],"synonyms":[{"name":"2,3-DHBA decarboxylase activity","type":"related"},{"name":"2,3-dihydroxybenzoate carboxy-lyase (catechol-forming)","type":"related"},{"name":"2,3-dihydroxybenzoate carboxy-lyase activity","type":"related"},{"name":"2,3-dihydroxybenzoate decarboxylase activity","type":"exact"},{"name":"2,3-dihydroxybenzoic acid decarboxylase activity","type":"related"}],"termid":"GO:0050150"}


id: PBO:0027784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_threonine_phosphorylation","termid":"PBO:0027784"}


id: GO:0038108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by leptin binding to its receptor on the surface of a cell, which reduces appetite, the desire or physical craving for food.","definition_xrefs":["PMID:19150989","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of appetite","termid":"GO:0032099"},{"relation_name":"is_a","term_name":"leptin-mediated signaling pathway","termid":"GO:0033210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of appetite by leptin-mediated signaling pathway","synonyms":[{"name":"inhibition of appetite by leptin signaling","type":"exact"},{"name":"negative regulation of appetite by leptin-mediated signalling pathway","type":"exact"},{"name":"reduction of appetite by leptin-mediated signaling","type":"exact"},{"name":"suppression of appetite by leptin-mediated signaling pathway","type":"exact"}],"termid":"GO:0038108"}


id: GO:0016920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of the N-terminal pyroglutamyl group from a peptide or protein.","definition_xrefs":["PMID:9920379","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0008233","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"pyroglutamyl-peptidase activity","termid":"GO:0016920"}


id: FYPO:0005595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a ceramide measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular ceramide level","synonyms":[{"name":"normal cellular ceramide accumulation","type":"related"},{"name":"normal cellular ceramide level during mitotic cell cycle","type":"related"},{"name":"normal cellular ceramide level during vegetative growth","type":"exact"}],"termid":"FYPO:0005595"}


id: GO:0102064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = gamma-curcumene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.94","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"gamma-curcumene synthase activity","secondary_identifiers":["RHEA:32031","MetaCyc:RXN-10599"],"termid":"GO:0102064"}


id: GO:0046833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of RNA from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"positively_regulates","term_name":"RNA export from nucleus","termid":"GO:0006405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA export from nucleus","synonyms":[{"name":"activation of RNA export from nucleus","type":"narrow"},{"name":"positive regulation of RNA export from cell nucleus","type":"exact"},{"name":"positive regulation of RNA export out of nucleus","type":"exact"},{"name":"positive regulation of RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of RNA-nucleus export","type":"exact"},{"name":"stimulation of RNA export from nucleus","type":"narrow"},{"name":"up regulation of RNA export from nucleus","type":"exact"},{"name":"up-regulation of RNA export from nucleus","type":"exact"},{"name":"upregulation of RNA export from nucleus","type":"exact"}],"termid":"GO:0046833"}


id: PBO:0068974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 218, pseudogene","termid":"PBO:0068974"}


id: PBO:0000858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z16 (predicted)","termid":"PBO:0000858"}


id: GO:0102324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-6-oxo-nona-2,4-dienoate + H2O = butyrate + 2-oxopent-4-enoate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-nona-2,4-dienoate hydrolase activity (obsolete GO:0102324)","termid":"GO:0102324"}


id: GO:0019724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"},{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell mediated immunity","synonyms":[{"name":"B lymphocyte mediated immune effector process","type":"exact"},{"name":"B lymphocyte mediated immunity","type":"exact"},{"name":"B-cell mediated immune effector process","type":"exact"},{"name":"B-cell mediated immunity","type":"exact"},{"name":"B-lymphocyte mediated immune effector process","type":"exact"},{"name":"B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0019724"}


id: PBO:0045382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 4","termid":"PBO:0045382"}


id: PBO:0059136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 3","termid":"PBO:0059136"}


id: PBO:0067712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 10","termid":"PBO:0067712"}


id: GO:0052867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol 1,4,5-trisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 1,4-bisphosphate + phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol trisphosphate phosphatase activity","termid":"GO:0034594"},{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-1,4,5-trisphosphate 5-phosphatase activity","synonyms":[{"name":"PtdIns(1,4,5)P(3) phosphatase activity","type":"broad"},{"name":"PtdIns(1,4,5)P3 phosphatase activity","type":"broad"},{"name":"phosphatidyl-myo-inositol-1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol 1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol-trisphosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphomonoesterase activity","type":"broad"}],"termid":"GO:0052867"}


id: PBO:0085744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in vesicular transport; mediates transport between an endosomal compartment and the Golgi, contains a Golgi-localization (GRIP) domain that interacts with activated Arl1p-GTP to localize Imh1p to the Golgi","termid":"PBO:0085744"}


id: PBO:0045298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 50","termid":"PBO:0045298"}


id: MONDO:0007463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal osteosclerosis","secondary_identifiers":["UMLS:C1852063","MESH:C565093","OMIM:126250","MEDGEN:338863"],"synonyms":[{"name":"distal osteosclerosis","type":"exact"},{"name":"osteosclerosis, distal","type":"related"}],"termid":"MONDO:0007463","xrefs":{"Monarch":{"xref_id":"0007463"}}}


id: FYPO:0001258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hypoxia is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during cellular response to oxygen","termid":"FYPO:0001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during cellular response to hypoxia","synonyms":[{"name":"normal protein accumulation during cellular response to hypoxia","type":"related"},{"name":"normal protein level during cellular response to hyperoxic stress","type":"exact"},{"name":"normal protein level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"normal protein level during cellular response to increased oxygen tension","type":"exact"}],"termid":"FYPO:0001258"}


id: PBO:0116903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_characteristic","termid":"PBO:0116903"}


id: PBO:0064004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 38","termid":"PBO:0064004"}


id: GO:2000213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"positively_regulates","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of glutamate metabolic process","synonyms":[{"name":"positive regulation of glutamate metabolism","type":"exact"},{"name":"positive regulation of glutamic acid metabolic process","type":"exact"},{"name":"positive regulation of glutamic acid metabolism","type":"exact"}],"termid":"GO:2000213"}


id: MONDO:0023089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical term that refers to the presence of a red flat and well defined lesion on the oral mucosa that is not caused by trauma, vascular, or inflammatory processes. It is a precancerous condition and is seen more commonly in middle aged or older males. It is associated with tobacco and alcohol consumption. Microscopic examination reveals severe epithelial dysplasia, carcinoma in situ, or invasive squamous cell carcinoma.","definition_xrefs":["NCIT:C3025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroplakia","secondary_identifiers":["UMLS:C0014818","MEDGEN:41862"],"synonyms":[{"name":"erythroplakia","type":"exact"}],"termid":"MONDO:0023089","xrefs":{"Monarch":{"xref_id":"0023089"}}}


id: MONDO:0007090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amastia, bilateral, with ureteral triplication and dysmorphism","secondary_identifiers":["MEDGEN:354882","OMIM:104350","MESH:C566295","UMLS:C1863015"],"synonyms":[{"name":"amastia, bilateral, with ureteral triplication and dysmorphism","type":"exact"}],"termid":"MONDO:0007090","xrefs":{"Monarch":{"xref_id":"0007090"}}}


id: FYPO:0000596
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119388],"is_not":false,"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal transposable element transposition","type":"exact"},{"name":"normal transposition during mitotic cell cycle","type":"related"},{"name":"normal transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: normal","type":"related"}],"termid":"FYPO:0000596","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000596":null,"FYPO_EXT:0000001":null}}


id: PBO:0056659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 26","termid":"PBO:0056659"}


id: PBO:0045210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5","termid":"PBO:0045210"}


id: GO:1990701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the ERGIC membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:24119662","GOC:bhm","PMID:16038056"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane (obsolete GO:1990701)","synonyms":[{"name":"integral component of ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"integral component of ERGIC membrane","type":"exact"},{"name":"integral component of endoplasmic reticulum-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:1990701"}


id: GO:0035951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of oligopeptide transport by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035951)","synonyms":[{"name":"positive regulation of oligopeptide transport by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035951"}


id: MONDO:0006166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A columnar cell lesion characterized by the presence of enlarged terminal ductal lobular units with dilated acini. The acini are lined by more than two layers of columnar epithelial cells. Prominent apical cytoplasmic snouts are present. Secretions are often present in the lumina of the dilated acini.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"columnar cell hyperplasia of the breast","secondary_identifiers":["NCIT:C54183","EFO:1000199","UMLS:C1707446","MEDGEN:310623"],"synonyms":[{"name":"CCH","type":"exact"},{"name":"columnar cell hyperplasia of breast","type":"exact"}],"termid":"MONDO:0006166","xrefs":{"Monarch":{"xref_id":"0006166"}}}


id: FYPO:0001561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-citrulline measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular citrulline level","synonyms":[{"name":"decreased cellular L-citrulline level","type":"exact"},{"name":"decreased cellular citrulline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular citrulline level during vegetative growth","type":"exact"},{"name":"decreased citrulline accumulation","type":"related"},{"name":"reduced cellular citrulline level","type":"exact"}],"termid":"FYPO:0001561"}


id: GO:0003746
data:
  {"annotated_genes":["SJAG_04157","SJAG_02738","SJAG_02017","SJAG_03461","SJAG_02180","SJAG_02812","SJAG_01438","SJAG_02493","SJAG_02189","SJAG_05271","SJAG_02353","SJAG_05332","SJAG_04351","SJAG_01851"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56886,68440,72537,73251,76691,77089,77201,79178,79531,79745,79780,91748,118294,118769],"is_not":false,"summary":null,"term":"GO:0003746"}]},"cv_name":"molecular_function","definition":"Functions in chain elongation during polypeptide synthesis at the ribosome.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation factor activity, RNA binding","termid":"GO:0008135"}],"gene_count":14,"genes_by_uniquename":{"SJAG_01438":null,"SJAG_01851":null,"SJAG_02017":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02353":null,"SJAG_02493":null,"SJAG_02738":null,"SJAG_02812":null,"SJAG_03461":null,"SJAG_04157":null,"SJAG_04351":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"translation elongation factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008182","GO:0008183","Reactome:R-HSA-192841","Reactome:R-HSA-192704"],"termid":"GO:0003746","terms_by_termid":{"GO:0003746":null}}


id: MONDO:0010863
data:
  {"annotated_genes":["SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87103],"is_not":false,"summary":null,"term":"MONDO:0010863"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the SUMO4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03843":null},"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110744","MEDGEN:325371","MESH:C563958","OMIM:600320","UMLS:C1838260"],"synonyms":[{"name":"IDDM5","type":"exact"},{"name":"SUMO4 type 1 diabetes mellitus","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 5","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 5","type":"exact"},{"name":"insulin-dependent diabetes mellitus 5","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in SUMO4","type":"exact"}],"termid":"MONDO:0010863","terms_by_termid":{"MONDO:0010863":null},"xrefs":{"Monarch":{"xref_id":"0010863"}}}


id: PBO:0071104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 106","termid":"PBO:0071104"}


id: PBO:0061721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2F","termid":"PBO:0061721"}


id: GO:1900622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Calcium-mediated signaling that results in positive regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:bf","GOC:BHF","PMID:9407035","GOC:dgf","GOC:TermGenie","PMID:9407036"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling (obsolete GO:1900622)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"calcineurin-dependent transcription activation","type":"narrow"},{"name":"calcineurin-dependent transcriptional induction","type":"narrow"},{"name":"calcineurin-mediated activation of transcription","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter by calcium-mediated signaling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global by calcium-mediated signaling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"}],"termid":"GO:1900622"}


id: GO:0043474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pigment, any general or particular coloring matter in living organisms, resulting in the deposition or aggregation of pigment in an organism, tissue or cell.","definition_xrefs":["GOC:tb","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"},{"relation_name":"part_of","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process involved in pigmentation","synonyms":[{"name":"pigment metabolic process during pigmentation","type":"related"},{"name":"pigment metabolism during pigmentation","type":"related"}],"termid":"GO:0043474"}


id: PBO:0016569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein, human apoptosis-inducing factor ortholog (predicted)","termid":"PBO:0016569"}


id: GO:0047753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline sulfate + H2O = choline + H+ + sulfate.","definition_xrefs":["RHEA:20820","EC:3.1.6.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"choline-sulfatase activity","secondary_identifiers":["KEGG_REACTION:R01028","MetaCyc:CHOLINE-SULFATASE-RXN"],"synonyms":[{"name":"choline-sulfate sulfohydrolase activity","type":"related"},{"name":"choline-sulphatase activity","type":"exact"}],"termid":"GO:0047753"}


id: SO:0000732
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an unverified region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted","secondary_identifiers":["http://en.wikipedia.org/wiki/Predicted"],"termid":"SO:0000732"}


id: MONDO:1010507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, cattle","secondary_identifiers":["OMIA:001803-9913"],"termid":"MONDO:1010507","xrefs":{"Monarch":{"xref_id":"1010507"}}}


id: GO:0060418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete structures that partition the water-soluble portion of the yolk of oocytes and ova, which may or may not be membrane enclosed.","definition_xrefs":["GOC:dph","PMID:18046696","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"yolk","termid":"GO:0060417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"yolk plasma","termid":"GO:0060418"}


id: PBO:0057690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1279","termid":"PBO:0057690"}


id: PBO:0082577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin transglycosylase; functions in the transfer of chitin to beta(1-6) and beta(1-3) glucans in the cell wall; similar to and functionally redundant with Crh1; glycosylphosphatidylinositol (GPI)-anchored protein localized to bud neck","termid":"PBO:0082577"}


id: GO:0047531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + ornithine = 5-amino-2-oxopentanoate + L-glutamate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,5-diaminovalerate transaminase activity (obsolete GO:0047531)","synonyms":[{"name":"2,5-diaminovalerate aminotransferase activity","type":"exact"}],"termid":"GO:0047531"}


id: GO:0031543
data:
  {"annotated_genes":["SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73633],"is_not":false,"summary":null,"term":"GO:0031543"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah","PMID:24550447","PMID:24550462","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"peptidyl-proline dioxygenase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"proline hydroxylase activity","type":"broad"},{"name":"proline,2-oxoglutarate 4-dioxygenase activity","type":"broad"},{"name":"prolyl 4-hydroxylase activity","type":"broad"},{"name":"prolyl hydroxylase activity","type":"broad"}],"termid":"GO:0031543","terms_by_termid":{"GO:0031543":null}}


id: GO:1901262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sorocarp spore cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"},{"relation_name":"negatively_regulates","term_name":"sorocarp spore cell differentiation","termid":"GO:0044671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sorocarp spore cell differentiation","synonyms":[{"name":"down regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"down-regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"downregulation of sorocarp spore cell differentiation","type":"exact"},{"name":"inhibition of sorocarp spore cell differentiation","type":"narrow"}],"termid":"GO:1901262"}


id: GO:0015599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + glutamine(out) -> ADP + phosphate + glutamine(in).","definition_xrefs":["RHEA:29895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"},{"relation_name":"is_a","term_name":"ATPase-coupled polar amino acid-transporter activity","termid":"GO:0015426"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled L-glutamine transmembrane transporter activity","secondary_identifiers":["MetaCyc:ABC-12-RXN"],"synonyms":[{"name":"ATPase-coupled glutamine transmembrane transporter activity","type":"broad"},{"name":"glutamine porter activity","type":"broad"},{"name":"glutamine-importing ATPase activity","type":"related"}],"termid":"GO:0015599"}


id: GO:0072045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the renal epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to the shaping of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in nephron morphogenesis","termid":"GO:0072045"}


id: MONDO:1010512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in pigs in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, pig","termid":"MONDO:1010460"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, SGCD-related, pig","secondary_identifiers":["OMIA:002211-9823"],"termid":"MONDO:1010512","xrefs":{"Monarch":{"xref_id":"1010512"}}}


id: GO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter transport","termid":"GO:0051590"},{"relation_name":"positively_regulates","term_name":"neurotransmitter uptake","termid":"GO:0001504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of neurotransmitter uptake","synonyms":[{"name":"activation of neurotransmitter uptake","type":"narrow"},{"name":"positive regulation of neurotransmitter import","type":"exact"},{"name":"stimulation of neurotransmitter uptake","type":"narrow"},{"name":"up regulation of neurotransmitter uptake","type":"exact"},{"name":"up-regulation of neurotransmitter uptake","type":"exact"},{"name":"upregulation of neurotransmitter uptake","type":"exact"}],"termid":"GO:0051582"}


id: PBO:0085410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane regulator of polyamine and carnitine transport; has similarity to transporters but lacks transport activity; may act as a sensor that transduces environmental signals; has a positive or negative regulatory effect on transcription of many transporter genes","termid":"PBO:0085410"}


id: GO:1900114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 trimethylation (obsolete GO:1900114)","synonyms":[{"name":"activation of histone H3-K9 trimethylation","type":"narrow"},{"name":"up regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"up-regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"upregulation of histone H3-K9 trimethylation","type":"exact"}],"termid":"GO:1900114"}


id: MONDO:0012709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the SHH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 5","secondary_identifiers":["MESH:C566899","GARD:15524","OMIM:611638","UMLS:C1968843","MEDGEN:369356"],"synonyms":[{"name":"MCOPCB5","type":"related"},{"name":"SHH microphthalmia, isolated, with coloboma","type":"exact"},{"name":"Shh microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia with coloboma 5","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 5","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in SHH","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in Shh","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 5","type":"exact"}],"termid":"MONDO:0012709","xrefs":{"Monarch":{"xref_id":"0012709"}}}


id: GO:1905153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane invagination.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:bf","PMID:26589353","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of membrane invagination","termid":"GO:1905153"}


id: PBO:0050002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIF1A stabilizing long noncoding RNA","termid":"PBO:0050002"}


id: PBO:0059763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 37","termid":"PBO:0059763"}


id: PBO:0036106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K8_acetylation_during_vegetative_growth","termid":"PBO:0036106"}


id: GO:0141061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cell of another organism, leading to damage or temporary subversion of that cell.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cell in another organism","termid":"GO:0141061"}


id: GO:0035599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) of the beta-carbon of peptidyl-aspartic acid to form peptidyl-L-beta-methylthioaspartic acid.","definition_xrefs":["RESID:AA0232","PMID:8844851","PMID:18252828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aspartic acid methylthiotransferase activity","termid":"GO:0035599"}


id: PBO:0072009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 11","termid":"PBO:0072009"}


id: PBO:0085252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein needed for Golgi-to-ER retrograde traffic; mediates Sey1p-independent homotypic ER fusion; forms Dsl1 tethering complex with Sec39p and Tip20p that forms a stable complex with ER SNAREs Sec20p, Ufe1p and Use1p and is functionally conserved from yeast to mammalian cells; component of the ER target site that interacts with coatomer; interacts with different subunits of COPI vesicle coat; interacts with Cin5p; homolog of fly and human ZW10 gene","termid":"PBO:0085252"}


id: GO:0007316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"pole plasm RNA localization","secondary_identifiers":["GO:0048116"],"synonyms":[{"name":"establishment and maintenance of pole plasm RNA localization","type":"exact"},{"name":"oocyte pole plasm RNA localization","type":"exact"},{"name":"pole plasm RNA localisation","type":"exact"}],"termid":"GO:0007316"}


id: GO:0046875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ephrin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ephrin receptor binding","synonyms":[{"name":"Eph receptor binding","type":"exact"},{"name":"GPI-linked ephrin","type":"narrow"},{"name":"ephrin","type":"narrow"},{"name":"transmembrane ephrin","type":"narrow"}],"termid":"GO:0046875"}


id: MONDO:0017923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple synostoses syndrome (MSS) is a rare developmental bone disorder characterized by proximal symphalangism of the fingers and/or toes often associated with fusion of carpal and tarsal, humeroradial, and cervical spine joints.","definition_xrefs":["Orphanet:3237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple synostoses syndrome","secondary_identifiers":["OMIMPS:186500","UMLS:C0175700","icd11.foundation:248917534","GARD:3836","MEDGEN:511579","DOID:0050794"],"synonyms":[{"name":"WL syndrome","type":"exact"},{"name":"deafness-Hermann type symphalangism syndrome","type":"exact"},{"name":"facio-audio-symphalangism","type":"exact"},{"name":"symphalangism-brachydactyly syndrome","type":"exact"}],"termid":"MONDO:0017923","xrefs":{"Monarch":{"xref_id":"0017923"}}}


id: PBO:0077045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor associated protein 3","termid":"PBO:0077045"}


id: MONDO:0002677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm composed of fibroblasts, and characterized by collagen production and usually a herringbone architectural pattern.","definition_xrefs":["NCIT:C9429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"conventional fibrosarcoma","secondary_identifiers":["DOID:3517","MEDGEN:232393","UMLS:C1333156"],"synonyms":[{"name":"classic fibrosarcoma","type":"exact"},{"name":"classical fibrosarcoma","type":"exact"},{"name":"conventional fibrosarcoma","type":"exact"}],"termid":"MONDO:0002677","xrefs":{"Monarch":{"xref_id":"0002677"}}}


id: MONDO:0032842
data:
  {"annotated_genes":["SJAG_01180"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86594],"is_not":false,"summary":null,"term":"MONDO:0032842"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01180":null},"genotype_count":0,"is_obsolete":false,"name":"Siddiqi syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081273","MEDGEN:1684813","OMIM:618635","UMLS:C5231435"],"synonyms":[{"name":"Deafness, Dystonia, Developmental Delay, and Poor Growth","type":"related"},{"name":"SIDDIQI SYNDROME","type":"related"},{"name":"SIDDIS","type":"related"}],"termid":"MONDO:0032842","terms_by_termid":{"MONDO:0032842":null},"xrefs":{"Monarch":{"xref_id":"0032842"}}}


id: MONDO:0971033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland carcinoma composed of groups of carcinoma cells with thymic epithelial differentiation.","definition_xrefs":["DOID:0081457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intrathyroid thymic carcinoma","secondary_identifiers":["MEDGEN:316474","UMLS:C1704613"],"termid":"MONDO:0971033","xrefs":{"Monarch":{"xref_id":"0971033"}}}


id: GO:0034480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 1,2-diacyl-sn-glycerol + H+ + phosphocholine.","definition_xrefs":["RHEA:10604","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phosphatidylcholine phospholipase C activity","secondary_identifiers":["Reactome:R-HSA-9680388","MetaCyc:PHOSPHOLIPASE-C-RXN","EC:3.1.4.3"],"synonyms":[{"name":"Clostridium oedematiens beta- and gamma-toxins activity","type":"narrow"},{"name":"Clostridium welchii alpha-toxin activity","type":"narrow"},{"name":"heat-labile hemolysin","type":"narrow"},{"name":"lipophosphodiesterase I activity","type":"related"},{"name":"phosphatidylcholine cholinephosphohydrolase activity","type":"related"},{"name":"phospholipase C, acting on phosphatidylcholine","type":"exact"}],"termid":"GO:0034480"}


id: PBO:0090808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase / phosphopantothenoylcysteine decarboxylase / protein phosphatase inhibitor moonlighting protein Hal3/Tds1","termid":"PBO:0090808"}


id: PBO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol kinase-related protein Tra2","termid":"PBO:0000244"}


id: MONDO:0016446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of cutis laxa that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutis laxa","termid":"MONDO:0016175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acquired cutis laxa","secondary_identifiers":["Orphanet:228285","GARD:20586","SCTID:19726003","MEDGEN:590500","UMLS:C0406549","icd11.foundation:807277512"],"synonyms":[{"name":"acquired cutis laxa","type":"exact"},{"name":"cutis laxa acquisita","type":"exact"}],"termid":"MONDO:0016446","xrefs":{"Monarch":{"xref_id":"0016446"}}}


id: GO:0010638
data:
  {"annotated_genes":["SJAG_03957","SJAG_01212","SJAG_00666","SJAG_02332","SJAG_00823","SJAG_04968","SJAG_00142","SJAG_04776","SJAG_00266","SJAG_03581","SJAG_01805","SJAG_02592","SJAG_03126","SJAG_03353","SJAG_03438","SJAG_03936","SJAG_02169","SJAG_01679","SJAG_00082","SJAG_01297","SJAG_04259","SJAG_03048","SJAG_02380","SJAG_04573","SJAG_01837","SJAG_03812","SJAG_02498","SJAG_03137","SJAG_03851","SJAG_05289","SJAG_04597","SJAG_02336","SJAG_00718","SJAG_03681","SJAG_03624","SJAG_03631","SJAG_00883","SJAG_02433","SJAG_04312","SJAG_02451","SJAG_02342","SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[90477,114072,113584,108054,115709,107032,103681,99376,111757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[93959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[108457,108367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[64276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903373"},{"annotations":[98749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[116483,89397,102164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[101639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[95507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[108682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"},{"annotations":[89746,94170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[110320,87280,94340,113166,94171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[102168,116485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"},{"annotations":[114576,111173,101897,93563,102169,99926,97472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[94172,89749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[111234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[90940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[88808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[90941,94132,110143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[107207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045876"},{"annotations":[96959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"},{"annotations":[97399,110065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061191"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00142":null,"SJAG_00266":null,"SJAG_00666":null,"SJAG_00718":null,"SJAG_00823":null,"SJAG_00883":null,"SJAG_01212":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02380":null,"SJAG_02433":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02990":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03137":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03581":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03812":null,"SJAG_03851":null,"SJAG_03936":null,"SJAG_03957":null,"SJAG_04259":null,"SJAG_04312":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04968":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of organelle organization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of organelle organisation","type":"exact"},{"name":"positive regulation of organelle organization and biogenesis","type":"related"}],"termid":"GO:0010638","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0031117":null,"GO:0031453":null,"GO:0032215":null,"GO:0045842":null,"GO:0045876":null,"GO:0061191":null,"GO:0090053":null,"GO:0090055":null,"GO:0090141":null,"GO:0090297":null,"GO:0110161":null,"GO:0140499":null,"GO:1901098":null,"GO:1902426":null,"GO:1902846":null,"GO:1903373":null,"GO:1903380":null,"GO:1903473":null,"GO:1903501":null,"GO:1905561":null,"GO:2000786":null}}


id: PBO:0066409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELT like 1","termid":"PBO:0066409"}


id: PBO:0088783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Atf31","termid":"PBO:0088783"}


id: MOD:00803
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tyrosine residue by a thioether bond to form 3-(S-L-cysteinyl)-L-tyrosine.","definition_xrefs":["RESID:AA0396","PubMed:15342250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"3-(S-L-cysteinyl)-L-tyrosine","synonyms":[{"name":"(2S,3R)-2-amino-3-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethylthio)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"3-(L-cystein-S-yl)-L-tyrosine","type":"exact"},{"name":"CROSSLNK 3-(S-cysteinyl)-tyrosine (Cys-Tyr)","type":"exact"},{"name":"S-(tyros-3'-yl)cysteine","type":"exact"},{"name":"XLNKSCys3Tyr","type":"exact"}],"termid":"MOD:00803"}


id: FYPO:0002527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the cell division site for longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein localization to cell division site","synonyms":[{"name":"increased duration of protein localisation to cell division site","type":"exact"},{"name":"increased duration of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"increased duration of protein recruitment to cell division site","type":"related"},{"name":"prolonged protein localization to cell division site","type":"exact"}],"termid":"FYPO:0002527"}


id: GO:0071575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the external side of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of external side of plasma membrane (obsolete GO:0071575)","synonyms":[{"name":"integral to external leaflet of plasma membrane","type":"exact"},{"name":"integral to external side of plasma membrane","type":"narrow"}],"termid":"GO:0071575"}


id: GO:0015346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ferric triacetylfusarinine C(out) + H+(out) = ferric triacetylfusarinine C(in) + H+(in).","definition_xrefs":["TC:2.A.1.16.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"ferric triacetylfusarinine C transmembrane transporter activity","termid":"GO:0015621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ferric triacetylfusarinine C:proton symporter activity","synonyms":[{"name":"ferric triacetylfusarinine C:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015346"}


id: PBO:0065366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin and Sec7 domain containing 2","termid":"PBO:0065366"}


id: PBO:0089597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor","termid":"PBO:0089597"}


id: PBO:0113462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of tail-anchored proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for normal mitochondrial morphology and inheritance; Get1p and Get2p form an aqueous channel for protein translocation and insertion into the membrane","termid":"PBO:0113462"}


id: MONDO:0008871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A microcephalic osteodysplastic primordial dwarfism that has material basis in homozygous or compound heterozygous mutation in the RNU4ATAC gene, encoding a small nuclear RNA (snRNA) component of the U12-dependent (minor) spliceosome, on chromosome 2q14.2. It is characterized by dwarfism, microcephaly, and neurologic abnormalities, including mental retardation, brain malformations, and ocular, auditory sensory deficits.","definition_xrefs":["OMIM:210710","PMID:22302400","DOID:0060608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephalic osteodysplastic primordial dwarfism","termid":"MONDO:0000060"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"microcephalic osteodysplastic primordial dwarfism types I and III","termid":"MONDO:0016994"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"RNU4ATAC spectrum disorder","termid":"MONDO:0100558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0700092"],"is_obsolete":false,"name":"microcephalic osteodysplastic primordial dwarfism type I","secondary_identifiers":["UMLS:C1859452","MEDGEN:347149","GARD:15144","SCTID:254102008"],"synonyms":[{"name":"MOPD 1","type":"exact"},{"name":"MOPD1","type":"exact"},{"name":"Taybi-Linder syndrome","type":"exact"},{"name":"brachymelic primordial dwarfism","type":"exact"},{"name":"cephaloskeletal dysplasia","type":"exact"},{"name":"low-birth-weight dwarfism with skeletal dysplasia","type":"exact"},{"name":"microcephalic osteodysplastic primordial dwarfism, type 1","type":"exact"},{"name":"microcephalic osteodysplastic primordial dwarfism, type I","type":"exact"},{"name":"osteodysplastic primordial dwarfism type I","type":"exact"},{"name":"osteodysplastic primordial dwarfism, type 1","type":"exact"}],"termid":"MONDO:0008871","xrefs":{"Monarch":{"xref_id":"0008871"}}}


id: PBO:0083599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; extensively overlaps essential NCB2 gene encoding the beta subunit of the NC2 dimeric histone-fold complex","termid":"PBO:0083599"}


id: GO:0030029
data:
  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cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular 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filament-based process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"microfilament-based 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id: GO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of male sex and sexual phenotypes in the hermaphroditic nematode soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"masculinization of hermaphrodite soma","termid":"GO:0042003"}


id: MONDO:0010518
data:
  {"annotated_genes":["SJAG_01732"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85675],"is_not":false,"summary":null,"term":"MONDO:0010518"}]},"cv_name":"mondo","definition":"Wiskott-Aldrich syndrome (WAS) is a primary immunodeficiency disease characterized by microthrombocytopenia, eczema, infections and an increased risk for autoimmune manifestations and malignancies.","definition_xrefs":["Orphanet:906"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01732":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Wiskott-Aldrich syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:D82.0","MESH:D014923","NANDO:1200330","OMIM:301000","UMLS:C0043194","icd11.foundation:168952525","SCTID:36070007","MedDRA:10047992","DOID:9169","GARD:7895","NANDO:2200704","NCIT:C3448","ICD9:279.12","MEDGEN:21921"],"synonyms":[{"name":"Aldrich syndrome","type":"related"},{"name":"Imd 2","type":"related"},{"name":"WAS","type":"exact"},{"name":"Wiskott Aldrich syndrome","type":"exact"},{"name":"Wiskott syndrome","type":"exact"},{"name":"Wiskott-Aldrich syndrome","type":"exact"},{"name":"Wiskott-Aldrich syndrome 1","type":"exact"},{"name":"Wiskott-Aldrich syndrome, X-linked recessive","type":"exact"},{"name":"eczema thrombocytopenia immunodeficiency syndrome","type":"related"},{"name":"eczema-thrombocytopenia-immunodeficiency syndrome","type":"exact"},{"name":"immunodeficiency 2","type":"exact"}],"termid":"MONDO:0010518","terms_by_termid":{"MONDO:0010518":null},"xrefs":{"Monarch":{"xref_id":"0010518"}}}


id: GO:1904928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any coreceptor activity that is involved in a canonical Wnt signaling pathway.","definition_xrefs":["GOC:bf","PMID:24431302","GOC:PARL","GOC:TermGenie","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in canonical Wnt signaling pathway (obsolete GO:1904928)","synonyms":[{"name":"Wnt co-receptor activity, canonical signaling","type":"exact"},{"name":"Wnt co-receptor, canonical pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway via beta-catenin","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signalling pathway through beta-catenin","type":"exact"},{"name":"coreceptor activity involved in canonical Wnt receptor signaling pathway","type":"exact"},{"name":"coreceptor activity involved in canonical Wnt-activated signaling pathway","type":"exact"},{"name":"coreceptor activity involved in frizzled-1 receptor signaling pathway","type":"narrow"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway through beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway via beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signalling pathway through beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt receptor signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt-activated signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in frizzled-1 receptor signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway through beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway via beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signalling pathway through beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt receptor signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt-activated signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in frizzled-1 receptor signaling pathway","type":"related"}],"termid":"GO:1904928"}


id: FYPO:0005563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are longer and thicker than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick stable microtubule bundle","termid":"FYPO:0005559"},{"relation_name":"is_a","term_name":"long stable microtubule bundle","termid":"FYPO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"long, thick stable microtubule bundle","synonyms":[{"name":"elongated, thick stable microtubule bundle","type":"exact"},{"name":"increased stable microtubule bundle length and thickness","type":"exact"},{"name":"long, thick Q-MT bundles","type":"exact"},{"name":"long, thick quiescent cell MT bundle","type":"exact"},{"name":"long, thick quiescent cell microtubule bundle","type":"exact"},{"name":"long, thick stable microtubule array","type":"related"},{"name":"long, thick static microtubule bundle","type":"exact"}],"termid":"FYPO:0005563"}


id: GO:1902981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in mitotic DNA replication (obsolete GO:1902981)","synonyms":[{"name":"synthesis of RNA primer involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902981"}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["PMID:2719476","PMID:8423010","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: MONDO:0012074
data:
  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86399],"is_not":false,"summary":null,"term":"MONDO:0012074"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mandibuloacral dysplasia","termid":"MONDO:0016584"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"mandibuloacral dysplasia with type B lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:90154","GARD:9989","icd11.foundation:1199517264","DOID:0081129","MEDGEN:332940","MESH:C535706","OMIM:608612","UMLS:C1837756"],"synonyms":[{"name":"MADB","type":"related"},{"name":"MANDIBULOACRAL dysplasia with type B lipodystrophy","type":"related"},{"name":"lipodystrophy, type B, associated with Mandibuloacral dysplasia","type":"related"},{"name":"mandibuloacral dysplasia with type B lipodystrophy","type":"exact"}],"termid":"MONDO:0012074","terms_by_termid":{"MONDO:0012074":null},"xrefs":{"Monarch":{"xref_id":"0012074"}}}


id: PBO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C Ptc4","termid":"PBO:0001603"}


id: PBO:0078578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 53A, pseudogene","termid":"PBO:0078578"}


id: MONDO:0019126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Intractable diarrhea of infancy (IDI) is a heterogeneous syndrome that includes several diseases with different aetiologies. Provisional classification of IDI, according to villous atrophy and based on immunohistological criteria, distinguishes two clearly different groups of IDI: 1) Immune-mediated: characterized by a mononuclear cell infiltration of the lamina propria and considered as being related to T cell activation. 2) The second histological pattern includes early onset severe intractable diarrhea histologically characterized by villous atrophy with low or without mononuclear cell infiltration of the lamina propria but specific histological abnormalities involving the epithelium.","definition_xrefs":["Orphanet:73014"],"gene_count":0,"genotype_count":0,"name":"obsolete intractable diarrhea of infancy (obsolete MONDO:0019126)","synonyms":[{"name":"IDI","type":"exact"}],"termid":"MONDO:0019126","xrefs":{"Monarch":{"xref_id":"0019126"}}}


id: PBO:0078919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 8-1","termid":"PBO:0078919"}


id: FYPO:0004794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine or threonine residues N-terminal to proline residues (i.e. in Ser/Thr-Pro sequences) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein phosphorylation at Ser/Thr-Pro site during vegetative growth (obsolete FYPO:0004794)","synonyms":[{"name":"decreased protein phosphorylation at S/TP site during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation at Ser/Thr-Pro site during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation at serine/threonine-proline site during vegetative growth","type":"exact"},{"name":"decreased protein serine or threonine phosphorylation at Ser/Thr-Pro site during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation at Ser/Thr-Pro site during vegetative growth","type":"exact"}],"termid":"FYPO:0004794"}


id: PBO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2 (predicted)","termid":"PBO:0000825"}


id: PBO:0049375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 5","termid":"PBO:0049375"}


id: PBO:0038791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 1 pseudogene 2","termid":"PBO:0038791"}


id: PBO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein Moa1","termid":"PBO:0002201"}


id: PBO:0051360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-7 (non-functional)","termid":"PBO:0051360"}


id: PBO:0000488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog (predicted)","termid":"PBO:0000488"}


id: PBO:0038501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 10","termid":"PBO:0038501"}


id: PBO:0085809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; encodes new type of domain, which ab initio modeling suggests is predominantly alpha-helical; nonessential for growth, deletion increases sensitivity to osmostress; expressed at moderate to high abundance; ORF also present in strains EC1118, YJM789, RM11-1a, and AWRI1631; Gln24 in S288C reference is substituted with Arg in wine strain EC1118; predicted S-palmitoylation site on Cys2, suggesting membrane association; transcript previously mischaracterized as SUT646","termid":"PBO:0085809"}


id: MONDO:0014084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 2","termid":"MONDO:0018996"},{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"ataxia with oculomotor apraxia type 3","secondary_identifiers":["DOID:0060557","GARD:13112","OMIM:615217","UMLS:C3554690","MEDGEN:767604"],"synonyms":[{"name":"AOA3","type":"related"},{"name":"ataxia-oculomotor apraxia 3","type":"exact"},{"name":"ataxia-oculomotor apraxia type 3","type":"exact"},{"name":"ataxia-oculomotor apraxia-3","type":"related"}],"termid":"MONDO:0014084","xrefs":{"Monarch":{"xref_id":"0014084"}}}


id: PBO:0085567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein essential for meiotic DNA replication and sporulation; cytoplasmic protein; subunit of the MIS complex which controls mRNA methylation during during the induction of sporulation; also interacts with Orc2p, which is a component of the origin recognition complex","termid":"PBO:0085567"}


id: PBO:0044749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 28","termid":"PBO:0044749"}


id: FYPO:0002019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere length during vegetative growth","termid":"FYPO:0006464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"elongated telomeres during vegetative growth","synonyms":[{"name":"elongated telomeres during mitotic cell cycle","type":"related"},{"name":"increased telomere length during vegetative growth","type":"exact"},{"name":"long telomeres during vegetative growth","type":"exact"}],"termid":"FYPO:0002019"}


id: PBO:0029842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029842"}


id: PBO:0081978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5A","termid":"PBO:0081978"}


id: MONDO:0009820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoporosis pseudoglioma syndrome is a very rare autosomal recessive disorder characterized by congenital or infancy-onset blindness and severe juvenile-onset osteoporosis and spontaneous fractures.","definition_xrefs":["Orphanet:2788"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"},{"relation_name":"is_a","term_name":"LRP5-related exudative vitreoretinopathy","termid":"MONDO:0700228"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005497","MONDO:0005328","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"osteoporosis-pseudoglioma syndrome","secondary_identifiers":["GARD:4160","MedDRA:10052452","MEDGEN:98480","MESH:C536063","NCIT:C130998","OMIM:259770","DOID:0060849","UMLS:C0432252"],"synonyms":[{"name":"OPPG","type":"exact"},{"name":"Ops","type":"related"},{"name":"ocular form of osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta ocular form","type":"related"},{"name":"osteogenesis imperfecta, ocular form","type":"related"},{"name":"osteoporosis pseudoglioma syndrome","type":"related"},{"name":"osteoporosis-pseudoglioma syndrome","type":"exact"},{"name":"pseudoglioma with bone fragility","type":"related"}],"termid":"MONDO:0009820","xrefs":{"Monarch":{"xref_id":"0009820"}}}


id: MOD:00425
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom with a hydroxyl group.","definition_xrefs":["Unimod:35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated residue","synonyms":[{"name":"Hy1Res","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"Oxidation or Hydroxylation","type":"related"}],"termid":"MOD:00425"}


id: GO:0033327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis.","definition_xrefs":["GOC:ln","PMID:12050120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Leydig cell differentiation","termid":"GO:0033327"}


id: PBO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erd1 homolog (predicted)","termid":"PBO:0000404"}


id: GO:0035334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic cleavages to the Notch protein that occur prior to ligand binding. A primary cleavage event within the extracellular domain whilst the Notch protein in still in the secretory pathway, leads to the transportation of a processed heterodimer to the cell surface.","definition_xrefs":["GOC:bf","PMID:12651094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"},{"relation_name":"part_of","term_name":"Notch receptor processing","termid":"GO:0007220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"Notch receptor processing, ligand-independent","synonyms":[{"name":"Notch S1 cleavage","type":"narrow"}],"termid":"GO:0035334"}


id: GO:0061840
data:
  {"annotated_genes":["SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92209],"is_not":false,"summary":null,"term":"GO:0061840"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ferrous iron (Fe(II) or Fe2+) ions from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:bhm","PMID:9413439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrous iron transmembrane transporter activity","termid":"GO:0015093"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04675":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high-affinity ferrous iron transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity ferrous uptake transmembrane transporter activity","type":"exact"},{"name":"high-affinity ferrous iron uptake transmembrane transporter activity","type":"exact"}],"termid":"GO:0061840","terms_by_termid":{"GO:0061840":null}}


id: GO:0046205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"nor-spermidine metabolic process","termid":"GO:0046204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine catabolic process","synonyms":[{"name":"nor-spermidine breakdown","type":"exact"},{"name":"nor-spermidine catabolism","type":"exact"},{"name":"nor-spermidine degradation","type":"exact"}],"termid":"GO:0046205"}


id: PBO:0088888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic methionine-tRNA ligase Mrs1","termid":"PBO:0088888"}


id: GO:0010413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylan, a polymer containing a beta-(1->4)-linked D-xylose backbone decorated with glucuronic acid side units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucuronoxylan metabolic process","synonyms":[{"name":"glucuronoxylan metabolism","type":"exact"}],"termid":"GO:0010413"}


id: PBO:0081358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 184","termid":"PBO:0081358"}


id: GO:0097072
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 3.","definition_xrefs":["GOC:cna","PMID:12855817","PMID:14556004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interferon regulatory factor 3 complex","synonyms":[{"name":"IRF3:IRF3 complex","type":"exact"}],"termid":"GO:0097072"}


id: PBO:0082012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 9","termid":"PBO:0082012"}


id: GO:0005138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-6 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-6 receptor binding","synonyms":[{"name":"IL-6","type":"narrow"},{"name":"interleukin-6 receptor ligand","type":"narrow"}],"termid":"GO:0005138"}


id: MONDO:1010972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, rabbit","secondary_identifiers":["OMIA:000312-9986"],"termid":"MONDO:1010972","xrefs":{"Monarch":{"xref_id":"1010972"}}}


id: GO:0038091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, which activates or increases the frequency, rate or extent of cell proliferation.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell proliferation","type":"narrow"},{"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of cell proliferation by VEGF/PDGFR signaling pathway","type":"exact"}],"termid":"GO:0038091"}


id: GO:0097755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of blood vessel diameter (obsolete GO:0097755)","synonyms":[{"name":"positive regulation of vasodilation","type":"related"}],"termid":"GO:0097755"}


id: PBO:0078368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 12-1","termid":"PBO:0078368"}


id: MONDO:0044283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete body mass index quantitative trait locus 18 (obsolete MONDO:0044283)","secondary_identifiers":["OMIM:615457"],"synonyms":[{"name":"BMIQ18","type":"related"},{"name":"body MASS index quantitative trait locus 18","type":"related"},{"name":"obesity, susceptibility to","type":"related"},{"name":"obesity, susceptibility to, BMIQ18","type":"exact"}],"termid":"MONDO:0044283","xrefs":{"Monarch":{"xref_id":"0044283"}}}


id: PBO:0052370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18A","termid":"PBO:0052370"}


id: PBO:0048392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2","termid":"PBO:0048392"}


id: PBO:0049425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 2","termid":"PBO:0049425"}


id: PBO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug103","termid":"PBO:0016910"}


id: PATO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Consisting of segments or similar parts arranged in a longitudinal series.","direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmented","termid":"PATO:0002312"}


id: MONDO:0016226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"specific learning disability","termid":"MONDO:0016225"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language disorder","secondary_identifiers":["MEDGEN:1631585","Orphanet:211053","MESH:D000080888","UMLS:C4553954"],"synonyms":[{"name":"dysphasia","type":"exact"},{"name":"specific language disorder","type":"exact"}],"termid":"MONDO:0016226","xrefs":{"Monarch":{"xref_id":"0016226"}}}


id: MONDO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the frontal sinus.","direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"frontal sinus neoplasm","termid":"MONDO:0001757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"frontal sinus cancer","secondary_identifiers":["ICD9:160.4","NCIT:C3542","MEDGEN:57786","ICD10CM:C31.2","UMLS:C0153478","DOID:1360","SCTID:363427000"],"synonyms":[{"name":"cancer of frontal sinus","type":"exact"},{"name":"frontal sinus cancer","type":"exact"},{"name":"malignant frontal sinus neoplasm","type":"exact"},{"name":"malignant frontal sinus tumor","type":"exact"},{"name":"malignant frontal sinus tumour","type":"exact"},{"name":"malignant neoplasm of frontal sinus","type":"exact"},{"name":"malignant neoplasm of the frontal sinus","type":"exact"},{"name":"malignant tumor of frontal sinus","type":"exact"},{"name":"malignant tumor of the frontal sinus","type":"exact"},{"name":"malignant tumour of frontal sinus","type":"exact"},{"name":"malignant tumour of the frontal sinus","type":"exact"}],"termid":"MONDO:0001756","xrefs":{"Monarch":{"xref_id":"0001756"}}}


id: PBO:0045022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRAS family GTPase 2","termid":"PBO:0045022"}


id: PBO:0050195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 12","termid":"PBO:0050195"}


id: PBO:0078295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 1-1","termid":"PBO:0078295"}


id: PBO:0079131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tsukushi, small leucine rich proteoglycan","termid":"PBO:0079131"}


id: GO:0008181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tumor suppressor (obsolete GO:0008181)","synonyms":[{"name":"tumor suppressor","type":"exact"}],"termid":"GO:0008181"}


id: FYPO:0005658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is abnormal.","definition_xrefs":["PMID:25414342","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"abnormal frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"abnormal levels of meiotic crossover associated with a gene conversion event","type":"exact"}],"termid":"FYPO:0005658"}


id: PBO:0056717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchyme homeobox 2","termid":"PBO:0056717"}


id: GO:0071468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH < 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:mah","Wikipedia:PH","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acidic pH","termid":"GO:0010447"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acidic pH","synonyms":[{"name":"cellular response to acidity","type":"broad"}],"termid":"GO:0071468"}


id: PBO:0086110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p; essential gene","termid":"PBO:0086110"}


id: RO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and a process by which the exposure stressor comes into contact with the exposure receptor","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_route","termid":"RO:0002242"}


id: GO:0008174
data:
  {"annotated_genes":["SJAG_02099","SJAG_04034","SJAG_00325","SJAG_05693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90212,93686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062152"},{"annotations":[72044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004482"},{"annotations":[109562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001734"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_02099":null,"SJAG_04034":null,"SJAG_05693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008174","terms_by_termid":{"GO:0001734":null,"GO:0004482":null,"GO:0062152":null}}


id: GO:0102787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin 3-O-beta-D-caffeoylglucoside + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoyl-CoA:pelargonidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity (obsolete GO:0102787)","termid":"GO:0102787"}


id: PBO:0081312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 92 pseudogene 2","termid":"PBO:0081312"}


id: MOD:00985
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated tyrosine","synonyms":[{"name":"HalTyr","type":"exact"}],"termid":"MOD:00985"}


id: GO:0060412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a ventricular septum is generated and organized. A ventricular septum is an anatomical structure that separates the lower chambers (ventricles) of the heart from one another.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"},{"relation_name":"part_of","term_name":"ventricular septum development","termid":"GO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum morphogenesis","synonyms":[{"name":"interventricular septum morphogenesis","type":"exact"}],"termid":"GO:0060412"}


id: PATO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color brightness which is relatively low.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color brightness","termid":"PATO:0000016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low brightness","synonyms":[{"name":"dark","type":"exact"}],"termid":"PATO:0000327"}


id: PBO:0075561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG21 abhydrolase domain containing, maspardin","termid":"PBO:0075561"}


id: MONDO:0021114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the Bartholin gland. Representative examples include adenoma, adenomyoma, adenocarcinoma, and squamous cell carcinoma.","definition_xrefs":["NCIT:C6434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartholin gland neoplasm","secondary_identifiers":["MEDGEN:65074","UMLS:C0220616"],"synonyms":[{"name":"Bartholin gland neoplasm","type":"exact"},{"name":"Bartholin's gland neoplasm","type":"exact"},{"name":"Bartholin's gland tumor","type":"exact"},{"name":"Bartholin's gland tumour","type":"exact"},{"name":"major vestibular gland neoplasm","type":"exact"},{"name":"major vestibular gland neoplasm (disease)","type":"exact"},{"name":"major vestibular gland tumor","type":"exact"},{"name":"major vestibular gland tumour","type":"exact"},{"name":"neoplasm of Bartholin's gland","type":"exact"},{"name":"neoplasm of major vestibular gland","type":"exact"},{"name":"neoplasm of the Bartholin's gland","type":"exact"},{"name":"tumor of Bartholin's gland","type":"exact"},{"name":"tumor of major vestibular gland","type":"exact"},{"name":"tumor of the Bartholin's gland","type":"exact"},{"name":"tumour of Bartholin's gland","type":"exact"},{"name":"tumour of major vestibular gland","type":"exact"},{"name":"tumour of the Bartholin's gland","type":"exact"}],"termid":"MONDO:0021114","xrefs":{"Monarch":{"xref_id":"0021114"}}}


id: GO:0045599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of adipocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of fat cell differentiation","termid":"GO:0045598"},{"relation_name":"negatively_regulates","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fat cell differentiation","synonyms":[{"name":"down regulation of fat cell differentiation","type":"exact"},{"name":"down-regulation of fat cell differentiation","type":"exact"},{"name":"downregulation of fat cell differentiation","type":"exact"},{"name":"inhibition of fat cell differentiation","type":"narrow"},{"name":"negative regulation of adipocyte cell differentiation","type":"exact"},{"name":"negative regulation of adipocyte differentiation","type":"exact"}],"termid":"GO:0045599"}


id: GO:0051946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"regulation of L-glutamate reuptake","type":"exact"},{"name":"regulation of L-glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of glutamate reuptake","type":"exact"},{"name":"regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"regulation of glutamate uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051946"}


id: GO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of taste in which a gustatory chemical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"part_of","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of taste","synonyms":[{"name":"perception of taste, detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory detection of taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory transduction of taste","type":"exact"},{"name":"taste perception","type":"broad"}],"termid":"GO:0050912"}


id: PBO:0047993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member J, pseudogene","termid":"PBO:0047993"}


id: PBO:0084206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication","termid":"PBO:0084206"}


id: GO:0052823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate + H2O = (2Z)-2-hydroxypenta-2,4-dienoate + fumarate + H+.","definition_xrefs":["RHEA:34191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-6-oxonona-2,4,7-trienedioate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12070","UM-BBD_reactionID:r1622","KEGG_REACTION:R06789"],"synonyms":[{"name":"(2E,4Z,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate fumarylhydrolase activity","type":"exact"},{"name":"2-hydroxy-6-ketonona-2,4,7-trienedoic acid hydrolase activity","type":"exact"}],"termid":"GO:0052823"}


id: PBO:0067151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 201, pseudogene","termid":"PBO:0067151"}


id: PBO:0003906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1","termid":"PBO:0003906"}


id: PR:O60069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swf1 gene.","definition_xrefs":["UniProtKB:O60069","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase swf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.07","synonyms":[{"name":"Spom972h-swf1","type":"exact"}],"termid":"PR:O60069"}


id: PBO:0060812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear paraspeckle assembly transcript 1","termid":"PBO:0060812"}


id: PBO:0049181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREM1 antisense RNA 1","termid":"PBO:0049181"}


id: FYPO:0004742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere","termid":"FYPO:0002360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal chromatin silencing at centromere outer repeat","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"normal chromatin silencing at centromere otr","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"normal chromatin silencing at pericentric region","type":"related"},{"name":"normal chromatin silencing at pericentromeric region","type":"related"},{"name":"normal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"normal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0004742"}


id: PBO:0086584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; emerging ORF that arose de novo from non-genic locus; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; localizes to mitochondria","termid":"PBO:0086584"}


id: SO:1000036
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A continuous nucleotide sequence is inverted in the same position.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion","secondary_identifiers":["loinc:LA6689-9"],"synonyms":[{"name":"inversion","type":"exact"}],"termid":"SO:1000036"}


id: PBO:0040472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR interacting protein","termid":"PBO:0040472"}


id: GO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071176"}


id: GO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:BHF","CL:0000236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell chemotaxis","termid":"GO:0035754"}


id: PBO:0034194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_replaces","termid":"PBO:0034194"}


id: GO:0004033
data:
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id: PBO:0039469
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 17","termid":"PBO:0039469"}


id: MONDO:0003468
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma characterized by the presence of both an epithelial and a spindle cell component.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"biphasic synovial sarcoma","secondary_identifiers":["DOID:5492","MEDGEN:137773","NCIT:C4279","UMLS:C0334507","ICDO:9043/3"],"synonyms":[{"name":"biphasic sarcoma of synovium","type":"exact"},{"name":"biphasic sarcoma of the synovium","type":"exact"},{"name":"synovial sarcoma, biphasic","type":"exact"},{"name":"synovial sarcoma, biphasic (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003468","xrefs":{"Monarch":{"xref_id":"0003468"}}}


id: PBO:0038468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 7","termid":"PBO:0038468"}


id: PBO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-245 beta chain","termid":"PBO:0044316"}


id: GO:1904882
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id: PBO:0005849
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.11","termid":"PBO:0005849"}


id: PBO:0028926
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription","termid":"PBO:0028926"}


id: GO:0034593
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id: FYECO:0000389
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  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with sulfate ions as the sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, sulfate sulfur source","synonyms":[{"name":"glucose MM, sulphate sulphur source","type":"exact"},{"name":"glucose minimal medium, sulfate sulfur source","type":"exact"},{"name":"glucose minimal medium, sulphate sulphur source","type":"exact"}],"termid":"FYECO:0000389"}


id: MONDO:0017056
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"DYRK1A-related intellectual disability syndrome","termid":"MONDO:0013578"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 21","termid":"MONDO:0016919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"DYRK1A-related intellectual disability syndrome due to 21q22.13q22.2 microdeletion","secondary_identifiers":["MEDGEN:1673021","Orphanet:268261","GARD:20947","UMLS:C5191008"],"synonyms":[{"name":"21q22.13-q22.2 microdeletion syndrome","type":"exact"},{"name":"21q22.13q22.2 microdeletion syndrome","type":"exact"},{"name":"Del(21)(q22.13q22.2)","type":"exact"},{"name":"monosomy 21q22.13-q22.2","type":"exact"},{"name":"monosomy 21q22.13q22.2","type":"exact"}],"termid":"MONDO:0017056","xrefs":{"Monarch":{"xref_id":"0017056"}}}


id: GO:0044772
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id: GO:0018162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cross-link between peptidyl-cysteine and peptidyl-threonine via the formation of S-(2-aminovinyl)-3-methyl-D-cysteine.","definition_xrefs":["RESID:AA0253"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(2-aminovinyl)-3-methyl-D-cysteine (obsolete GO:0018162)","termid":"GO:0018162"}


id: GO:0033482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate biosynthetic process","termid":"GO:0033481"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"D-galacturonate metabolic process","termid":"GO:0046396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"D-galacturonate biosynthetic process","synonyms":[{"name":"D-galacturonate anabolism","type":"exact"},{"name":"D-galacturonate biosynthesis","type":"exact"},{"name":"D-galacturonate formation","type":"exact"},{"name":"D-galacturonate synthesis","type":"exact"}],"termid":"GO:0033482"}


id: GO:2000031
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salicylic acid mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:2000031"}


id: MONDO:0005112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from mesothelial cells in the pleura and shows a diffuse growth pattern. It arises on the parietal and sometimes visceral pleura as multiple small nodules that later become confluent and invade the chest wall adipose tissue and muscle. Asbestos exposure is the main cause for the development of pleural malignant mesothelioma. It usually affects patients over sixty years of age. The latency period is long. Patients usually present with pleural effusion, dyspnea and chest wall pain. Additional signs and symptoms include chills, sweating, weight loss, and weakness. Morphologic variants include epithelioid, desmoplastic, sarcomatoid, and biphasic mesothelioma. The clinical course is usually aggressive.","definition_xrefs":["NCIT:C7376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleural mesothelioma","termid":"MONDO:0003308"},{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"},{"relation_name":"is_a","term_name":"pleural cancer","termid":"MONDO:0006294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant pleural mesothelioma","secondary_identifiers":["DOID:7474","MEDGEN:208810","EFO:0000770","SCTID:254645002","UMLS:C0812413"],"synonyms":[{"name":"malignant mesothelioma of pleura","type":"exact"},{"name":"malignant mesothelioma of the pleura","type":"exact"},{"name":"malignant pleural mesothelioma","type":"exact"},{"name":"pleura mesothelioma","type":"broad"},{"name":"pleural diffuse malignant mesothelioma","type":"exact"},{"name":"pleural malignant mesothelioma","type":"exact"}],"termid":"MONDO:0005112","xrefs":{"Monarch":{"xref_id":"0005112"}}}


id: PBO:0071413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 19","termid":"PBO:0071413"}


id: MONDO:0035312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of inflammatory pseudotumor of the liver characterized by a benign, well-circumscribed tumor with fibrohistiocytic infiltration (including xanthogranulomatous inflammation, multinucleated giant cells, and neutrophilic infiltration), typically localized in the peripheral hepatic parenchyma. Presentation may be of non-specific symptoms (fever, malaise, and abdominal pain) or as an incidental finding.","definition_xrefs":["Orphanet:555434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"fibrohistiocytic inflammatory pseudotumor of the liver","secondary_identifiers":["MEDGEN:1843230","GARD:22239","ICD10CM:K75.8","UMLS:C5681328"],"termid":"MONDO:0035312","xrefs":{"Monarch":{"xref_id":"0035312"}}}


id: GO:0051056
data:
  {"annotated_genes":["SJAG_03353","SJAG_00082","SJAG_03592","SJAG_04943","SJAG_01386","SJAG_04329","SJAG_00600","SJAG_02379","SJAG_03681","SJAG_02169","SJAG_01790","SJAG_03631","SJAG_00883","SJAG_04776","SJAG_03936","SJAG_04455","SJAG_03488","SJAG_00526","SJAG_02514","SJAG_01464","SJAG_01805","SJAG_00078","SJAG_03048","SJAG_03508","SJAG_06270","SJAG_04462","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[71236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[115712,92600,92684,95400,91489,101063,104837,109967,107341,90481,107034,93218,99378,106897,72471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[93566,89750,87282,102174,110321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[74467,69725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032483"},{"annotations":[113170,104289,89712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031029"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03488":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04329":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9012999"],"synonyms":[{"name":"regulation of small GTPase-mediated signal transduction","type":"exact"}],"termid":"GO:0051056","terms_by_termid":{"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0032483":null,"GO:0035024":null,"GO:0046580":null}}


id: MONDO:1012231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary adenomatosis, non-human animal","termid":"MONDO:1011927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary adenomatosis, dog","secondary_identifiers":["OMIA:000840-9615"],"termid":"MONDO:1012231","xrefs":{"Monarch":{"xref_id":"1012231"}}}


id: PBO:0058371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4743","termid":"PBO:0058371"}


id: PBO:0054983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2397","termid":"PBO:0054983"}


id: MONDO:0030318
data:
  {"annotated_genes":["SJAG_04533","SJAG_03393"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86081,86082],"is_not":false,"summary":null,"term":"MONDO:0030318"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03393":null,"SJAG_04533":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 30","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619405","MEDGEN:1778853","DOID:0070411","UMLS:C5543620"],"synonyms":[{"name":"SCAR30","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 30","type":"exact"}],"termid":"MONDO:0030318","terms_by_termid":{"MONDO:0030318":null},"xrefs":{"Monarch":{"xref_id":"0030318"}}}


id: MONDO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An upper respiratory tract disease characterized by the unusual growth of the adenoid tonsil; has symptom snoring, has symptom hyponasality, has symptom otitis media with effusion, has symptom mouth breathing.","definition_xrefs":["PMID:21126775","DOID:0060311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenoid hypertrophy","secondary_identifiers":["SCTID:111591002","ICD9:474.12","UMLS:C0455938","MEDGEN:628857","MedDRA:10001229"],"synonyms":[{"name":"adenoidal hypertrophy","type":"exact"},{"name":"enlarged adenoids","type":"exact"}],"termid":"MONDO:0000740","xrefs":{"Monarch":{"xref_id":"0000740"}}}


id: GO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of immunoglobulin production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immunoglobulin production","termid":"GO:0002637"},{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"positively_regulates","term_name":"immunoglobulin production","termid":"GO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunoglobulin production","secondary_identifiers":["GO:0051024","GO:0002642"],"synonyms":[{"name":"activation of immunoglobulin production","type":"narrow"},{"name":"positive regulation of immunoglobulin biosynthetic process","type":"narrow"},{"name":"positive regulation of immunoglobulin secretion","type":"narrow"},{"name":"stimulation of immunoglobulin production","type":"narrow"},{"name":"up regulation of immunoglobulin production","type":"exact"},{"name":"up-regulation of immunoglobulin production","type":"exact"},{"name":"upregulation of immunoglobulin production","type":"exact"}],"termid":"GO:0002639"}


id: GO:0018896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibenzothiophene metabolic process","termid":"GO:0018895"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"dibenzothiophene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:dbt2"],"synonyms":[{"name":"dibenzothiophene breakdown","type":"exact"},{"name":"dibenzothiophene catabolism","type":"exact"},{"name":"dibenzothiophene degradation","type":"exact"}],"termid":"GO:0018896"}


id: PBO:0078878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 1","termid":"PBO:0078878"}


id: PBO:0055864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 11","termid":"PBO:0055864"}


id: PBO:0071589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 6","termid":"PBO:0071589"}


id: GO:0150178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["PMID:30074985","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"}


id: MONDO:0023303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Hamanishi-Ueba-Tsuji syndrome (obsolete MONDO:0023303)","termid":"MONDO:0023303","xrefs":{"Monarch":{"xref_id":"0023303"}}}


id: MONDO:0016122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic paralysis","secondary_identifiers":["GARD:20374","MEDGEN:488958","HP:0003768","Orphanet:206976","MedDRA:10016208","UMLS:C1279412","MESH:D010245","icd11.foundation:577112387"],"synonyms":[{"name":"periodic paralysis","type":"exact"},{"name":"periodic paralysis (disease)","type":"exact"}],"termid":"MONDO:0016122","xrefs":{"Monarch":{"xref_id":"0016122"}}}


id: PBO:0004574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter (predicted)","termid":"PBO:0004574"}


id: MONDO:0010268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked lissencephaly with abnormal genitalia (XLAG) is a severe neurological disorder that only manifests in genotypic males and includes lissencephaly with posterior-to-anterior gradient and only moderate increase in thickness of the cortex, absent corpus callosum, neonatal-onset severe epilepsy, hypothalamic dysfunction including defective temperature regulation, and ambiguous genitalia with micropenis and cryptorchidism. XLAG differs considerably from classical lissencephaly, as the resulting cortical thickness is only 6-7 mm in XLAG, rather than 15-20 mm seen in classical lissencephaly due to mutations of the PAFAH1B1 or DCX genes. In 2002, mutations in the X-linked aristaless-related homeobox gene (ARX ; Xp21.3) were identified in individuals with XLAG and in some of their female relatives. Mouse Arx and human ARX are highly expressed in both dorsal and ventral telencephalon, including the neocortical ventricular zone and germinal zone of the ganglionic eminence, with less intense signals in the subventricular zone, cortical plate, hippocampus, basal ganglia and ventral thalamus. Arx-deficient mice showed deficient tangential migration and abnormal differentiation of GABAergic interneurons in the ganglionic eminence and neocortex, as well as abnormal testicular differentiation. These characteristics include some of the clinical features of XLAG in humans. The ARX mutations in XLAG patients were predominantly premature termination mutations (large deletions, frameshift, nonsense mutations, splice site mutations) while the missense mutations were less common and located essentially in the homeobox domain. Patients carrying nonconservative missense mutations within the homeobox, showed less severe XLAG, while conservative substitution in the homeodomain caused Proud syndrome (ACC with abnormal genitalia). A non conservative missense mutation near the C-terminal aristaless domain caused unusually severe XLAG with microcephaly and mild cerebellar hypoplasia. The ARX mutations are also associated with a spectrum of milder phenotypes, without macroscopic malformations of the brain, such as X-linked infantile spasms, a syndrome featuring mental retardation associated with distal dystonic movements (Partington syndrome), autistic features and nonsyndromicintellectual deficit.","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked lissencephaly with abnormal genitalia","secondary_identifiers":["MEDGEN:375832","Orphanet:452","OMIM:300215","MESH:C564563","GARD:12491","UMLS:C1846171","SCTID:717632002","DOID:0112238"],"synonyms":[{"name":"LISX2","type":"related"},{"name":"X-linked lissencephaly - agenesis of the corpus callosum - genital anomalies","type":"related"},{"name":"X-linked lissencephaly with abnormal genitalia","type":"exact"},{"name":"X-linked lissencephaly with ambiguous genitalia","type":"exact"},{"name":"X-linked lissencephaly-agenesis of the corpus callosum-genital anomalies syndrome","type":"exact"},{"name":"X-linked lissencephaly-corpus callosum agenesis-genital anomalies syndrome","type":"exact"},{"name":"XLAG (X-linked lissencephaly with abnormal genitalia) syndrome","type":"exact"},{"name":"XLAG syndrome","type":"related"},{"name":"Xlisg","type":"related"},{"name":"hydranencephaly and abnormal genitalia","type":"related"},{"name":"hydranencephaly with abnormal genitalia","type":"related"},{"name":"lissencephaly, X-linked 2","type":"related"},{"name":"lissencephaly, X-linked, 2","type":"related"},{"name":"lissencephaly, X-linked, type 2","type":"exact"},{"name":"lissencephaly, X-linked, with ambiguous genitalia","type":"related"}],"termid":"MONDO:0010268","xrefs":{"Monarch":{"xref_id":"0010268"}}}


id: GO:0071499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a laminar fluid shear stress stimulus. Laminar fluid flow is the force acting on an object in a system where the fluid is moving across a solid surface in parallel layers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to laminar fluid shear stress","termid":"GO:0034616"},{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to laminar fluid shear stress","termid":"GO:0071499"}


id: PBO:0017887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase kink, Knk1","termid":"PBO:0017887"}


id: PBO:0088692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha family nuclear import signal receptor adaptor Imp1","termid":"PBO:0088692"}


id: PBO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 13","termid":"PBO:0042598"}


id: FYPO:0005971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which proton transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal proton transport","synonyms":[{"name":"abnormal H+ ion transport","type":"exact"},{"name":"abnormal hydrogen ion transport","type":"exact"},{"name":"abnormal proton transmembrane transport","type":"exact"}],"termid":"FYPO:0005971"}


id: FYPO:0006636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is detected abnormally distributed throughout the cell cortex. The protein may normally be restricted to part of the cell cortex, or not normally located in the cell cortex at all.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized protein distributed in cell cortex","synonyms":[{"name":"mislocalised protein distributed in cell cortex","type":"exact"},{"name":"mislocalized protein distributed at cell surface","type":"related"},{"name":"mislocalized protein distributed in cell cortex during mitotic cell cycle","type":"related"},{"name":"mislocalized protein distributed in cell cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006636"}


id: PBO:0066279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member C, pseudogene","termid":"PBO:0066279"}


id: PBO:0003267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp107","termid":"PBO:0003267"}


id: MONDO:0009829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pallidal degeneration, progressive, with retinitis pigmentosa (obsolete MONDO:0009829)","secondary_identifiers":["MESH:C564910","OMIM:260200"],"synonyms":[{"name":"pallidal degeneration, progressive, with retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0009829","xrefs":{"Monarch":{"xref_id":"0009829"}}}


id: FYPO:0001916
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus, is longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"elongated mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"elongated mononucleate cell during mitotic cell cycle","type":"related"},{"name":"elongated mononucleate cell during vegetative growth","type":"exact"},{"name":"long mononucleate cell","type":"exact"}],"termid":"FYPO:0001916","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0009910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flower development","termid":"GO:0009909"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flower development","synonyms":[{"name":"down regulation of flower development","type":"exact"},{"name":"down-regulation of flower development","type":"exact"},{"name":"downregulation of flower development","type":"exact"},{"name":"inhibition of flower development","type":"narrow"}],"termid":"GO:0009910"}


id: MONDO:0000185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polyposis syndrome, hereditary mixed (obsolete MONDO:0000185)","termid":"MONDO:0000185","xrefs":{"Monarch":{"xref_id":"0000185"}}}


id: PBO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk19","termid":"PBO:0003310"}


id: GO:1901533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"negatively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"down regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"downregulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of hematopoietic progenitor cell differentiation","type":"related"},{"name":"inhibition of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"negative regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901533"}


id: GO:0071586
data:
  {"annotated_genes":["SJAG_03396","SJAG_00730"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69908,74522],"is_not":false,"summary":null,"term":"GO:0071586"}]},"cv_name":"biological_process","definition":"The second process in a series of specific posttranslational modifications to the CAAX box region of CAAX box proteins, in which the last three amino acids of the protein (AAX) are removed by proteolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"},{"relation_name":"part_of","term_name":"CAAX-box protein maturation","termid":"GO:0080120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"CAAX-box protein processing","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071586","terms_by_termid":{"GO:0071586":null}}


id: PBO:0011460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trancriptional repressor protein BolA domain (predicted)","termid":"PBO:0011460"}


id: PBO:0054907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2321","termid":"PBO:0054907"}


id: FYPO:0004114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a septum with abnormal size, shape, or structure.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000004","FYPO:0000032","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, abnormal septum morphology","synonyms":[{"name":"inviable after spore germination, undivided cell, abnormal septum morphology","type":"exact"},{"name":"inviable after spore germination, without cell division, abnormal septum formation","type":"exact"},{"name":"inviable following spore germination, without cell division, abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, abnormal septum morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004114"}


id: PBO:0077450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 183A","termid":"PBO:0077450"}


id: PBO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex beta subunit","termid":"PBO:0002723"}


id: GO:0006685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin metabolic process","termid":"GO:0006684"},{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingomyelin catabolic process","synonyms":[{"name":"sphingomyelin breakdown","type":"exact"},{"name":"sphingomyelin catabolism","type":"exact"},{"name":"sphingomyelin degradation","type":"exact"}],"termid":"GO:0006685"}


id: GO:0110107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of imaginal disc-derived wing vein specification.","definition_xrefs":["PMID:11861482","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"imaginal disc-derived wing vein specification","termid":"GO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived wing vein specification","termid":"GO:0110107"}


id: PBO:0012837
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature peptide sequence is YTPKVPYM","termid":"PBO:0012837"}


id: PBO:0003581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein implicated in cell cycle regulation","termid":"PBO:0003581"}


id: PBO:0029740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spherical_cell_during_nitrogen_starvation","termid":"PBO:0029740"}


id: MONDO:0010684
data:
  {"annotated_genes":["SJAG_01939"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85197],"is_not":false,"summary":null,"term":"MONDO:0010684"}]},"cv_name":"mondo","definition":"X-linked myopathy with excessive autophagy is a childhood-onset X-linked myopathy characterized by slow progression of muscle weakness and unique histopathological findings.","definition_xrefs":["Orphanet:25980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"X-linked myopathy with excessive autophagy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200223","GARD:3892","SCTID:719815005","NORD:1866","MEDGEN:374264","MESH:C536522","OMIM:310440","UMLS:C1839615","DOID:0050760"],"synonyms":[{"name":"MEAX","type":"related"},{"name":"XMEA","type":"exact"},{"name":"myopathy, X-linked, with excessive autophagy","type":"related"},{"name":"myopathy, X-linked, with excessive autophagy, X-linked recessive","type":"exact"},{"name":"vacuolar myopathy","type":"exact"}],"termid":"MONDO:0010684","terms_by_termid":{"MONDO:0010684":null},"xrefs":{"Monarch":{"xref_id":"0010684"}}}


id: MONDO:0006443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tenosynovial giant cell tumor (obsolete MONDO:0006443)","termid":"MONDO:0006443","xrefs":{"Monarch":{"xref_id":"0006443"}}}


id: GO:0099053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that contains TRIP4 (ASC1) and acts a transcriptional coactivator by interacting with transcription factors such as NF-kappa B. In humans this complex has 4 subunits: TRIP4 + ASCC1-3.","definition_xrefs":["PMID:12077347"],"gene_count":0,"genotype_count":0,"name":"obsolete activating signal cointegrator 1 complex (obsolete GO:0099053)","synonyms":[{"name":"ASC-1 complex","type":"exact"}],"termid":"GO:0099053"}


id: GO:1990760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when a change in the osmolarity occurs in the extracellular space of the cell in which the cation channel resides.","definition_xrefs":["PMID:18279313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensor activity","termid":"GO:0005034"},{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0038023","GO:0005215","GO:0140299","GO:0098772","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"osmolarity-sensing monoatomic cation channel activity","synonyms":[{"name":"osmolarity-sensing cation channel activity","type":"broad"}],"termid":"GO:1990760"}


id: PBO:0070517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 16","termid":"PBO:0070517"}


id: GO:0030721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spectrosome, a germline specific spherical organelle that is the precursor to the fusome.","definition_xrefs":["PMID:11131529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spectrosome organization","synonyms":[{"name":"spectrosome organisation","type":"exact"},{"name":"spectrosome organization and biogenesis","type":"related"}],"termid":"GO:0030721"}


id: MONDO:0004843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary movements of the eyeballs. The presence or absence of nystagmus is often used in the diagnosis of a variety of neurological and visual disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pathologic nystagmus","secondary_identifiers":["UMLS:C0028738","DOID:9650","ICD9:379.50","MEDGEN:45166","MESH:D009759"],"termid":"MONDO:0004843","xrefs":{"Monarch":{"xref_id":"0004843"}}}


id: PBO:0051543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 receptor pseudogene 1","termid":"PBO:0051543"}


id: PBO:0038689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin beta like 2","termid":"PBO:0038689"}


id: GO:0062058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription factor TFIIH holo complex.","definition_xrefs":["PMID:11259578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transcription factor TFIIH holo complex binding","termid":"GO:0062058"}


id: MONDO:0010029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital condition in which there is complete right-to-left reversal of the position of the major thoracic and abdominal organs (that is, they are arranged in a mirror image of the normal positioning).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus","secondary_identifiers":["GARD:4883","ICD10CM:Q89.3","MESH:D012857","MEDGEN:1642262","SCTID:24614000","icd11.foundation:797648408","HP:0001696","ICD9:759.89","ICD9:759.3","NCIT:C87121","UMLS:C4551493","Orphanet:101063","DOID:758"],"synonyms":[{"name":"complete situs inversus","type":"exact"},{"name":"complete situs inversus viscerum","type":"exact"},{"name":"complete transposition (morphologic abnormality)","type":"exact"},{"name":"laterality sequence","type":"exact"},{"name":"situs ambiguus","type":"related"},{"name":"situs inversus","type":"exact"},{"name":"situs inversus totalis","type":"exact"},{"name":"situs inversus totalis (disease)","type":"exact"}],"termid":"MONDO:0010029","xrefs":{"Monarch":{"xref_id":"0010029"}}}


id: PBO:0045432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like 2","termid":"PBO:0045432"}


id: PBO:0044750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 31","termid":"PBO:0044750"}


id: PBO:0042482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 8","termid":"PBO:0042482"}


id: MONDO:0015957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic movement disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic movement disorder (obsolete MONDO:0015957)","secondary_identifiers":["Orphanet:183521"],"synonyms":[{"name":"rare genetic movement disorder","type":"exact"}],"termid":"MONDO:0015957","xrefs":{"Monarch":{"xref_id":"0015957"}}}


id: FYPO:0005750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Zeocin (phleomycin D1). Cells stop growing (and may die) at a concentration of Zeocin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to Zeocin","synonyms":[{"name":"hypersensitive to Zeocin","type":"exact"},{"name":"sensitive to Zeocin during mitotic cell cycle","type":"related"},{"name":"sensitive to Zeocin during vegetative growth","type":"exact"},{"name":"sensitive to phleomycin D1","type":"exact"}],"termid":"FYPO:0005750"}


id: GO:1903068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell tip.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24554432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell tip","synonyms":[{"name":"activation of protein localisation to cell tip","type":"narrow"},{"name":"activation of protein localization to cell tip","type":"narrow"},{"name":"positive regulation of protein localisation to cell tip","type":"exact"},{"name":"up regulation of protein localisation to cell tip","type":"exact"},{"name":"up regulation of protein localization to cell tip","type":"exact"},{"name":"up-regulation of protein localisation to cell tip","type":"exact"},{"name":"up-regulation of protein localization to cell tip","type":"exact"},{"name":"upregulation of protein localisation to cell tip","type":"exact"},{"name":"upregulation of protein localization to cell tip","type":"exact"}],"termid":"GO:1903068"}


id: FYPO:0004518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated) and is curved along the long axis, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, branched, elongated cell","termid":"FYPO:0002170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, branched, curved, elongated cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated, curved and branched cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"}],"termid":"FYPO:0004518"}


id: PBO:0091387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glomulin, ubiquitin-protein transferase inhibitor Glm1","termid":"PBO:0091387"}


id: PBO:0091548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbh1, domesticated transposable element","termid":"PBO:0091548"}


id: MONDO:0024235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually benign tumor composed of solid and cystic nests of epithelial cells resembling transitional epithelium; it is surrounded by an abundant stromal component that is dense and fibroblastic in nature.","definition_xrefs":["NCIT:C39954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system neoplasm","termid":"MONDO:0006054"},{"relation_name":"is_a","term_name":"transitional cell neoplasm","termid":"MONDO:0037254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brenner tumor","secondary_identifiers":["MEDGEN:1645498","MESH:D001948","ONCOTREE:BTOV","UMLS:C4551593","ICDO:9000/0"],"synonyms":[{"name":"Brenner tumor","type":"exact"}],"termid":"MONDO:0024235","xrefs":{"Monarch":{"xref_id":"0024235"}}}


id: PBO:0013093
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Replication Uncoupled from Mitosis","termid":"PBO:0013093"}


id: PR:Q9URX8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup155 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin C890.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.06","secondary_identifiers":["UniProtKB:Q9URX8"],"synonyms":[{"name":"Spom972h-NUP155","type":"exact"}],"termid":"PR:Q9URX8"}


id: FYPO:0005641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochores become separated during the first meiotic nuclear division, and in which homologous chromosomes do not move towards the spindle poles at the same time during anaphase, but are eventually separated normally.","definition_xrefs":["PMID:21920317","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging chromosomes during meiosis I","termid":"FYPO:0004393"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and sister chromatid non-disjunction in meiosis II","termid":"FYPO:0005633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","synonyms":[{"name":"abnormal chromosome segregation during first meiotic nuclear division with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with precocious centromeric dissociation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome segregation","type":"related"},{"name":"abnormal chromosome segregation during meiosis I with split kinetochores, lagging chromosomes, and normal chromosome separation","type":"related"}],"termid":"FYPO:0005641"}


id: PBO:0116752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit D2","termid":"PBO:0116752"}


id: PBO:0063883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class M","termid":"PBO:0063883"}


id: PBO:0111897
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B box","termid":"PBO:0111897"}


id: PBO:0062264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 1","termid":"PBO:0062264"}


id: PBO:0083449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CDC9/YDL164C encoding DNA ligase","termid":"PBO:0083449"}


id: GO:0015431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + glutathione S-conjugate(in) -> ADP + phosphate + glutathione S-conjugate(out).","definition_xrefs":["GOC:jl","PMID:1455517","RHEA:19121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type glutathione S-conjugate transporter activity","secondary_identifiers":["GO:0071997","EC:7.6.2.3","MetaCyc:TRANS-RXN-358"],"synonyms":[{"name":"ATP-dependent glutathione S-conjugate export pump","type":"exact"},{"name":"ATPase-coupled glutathione S-conjugate transmembrane transporter activity","type":"related"},{"name":"GS-X pump","type":"exact"},{"name":"MRP1/GS-X pump","type":"exact"},{"name":"conjugate transporter activity","type":"broad"},{"name":"glutathione S-conjugate-exporting ATPase activity","type":"narrow"},{"name":"glutathione S-conjugate-transporting ATPase activity","type":"related"}],"termid":"GO:0015431"}


id: PBO:0083519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRPL9/YGR220C","termid":"PBO:0083519"}


id: PBO:0065401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 4","termid":"PBO:0065401"}


id: PR:O14281
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8C9.12c gene.","definition_xrefs":["UniProtKB:O14281","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C8C9.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.12c","synonyms":[{"name":"Spom972h-SPAC8C9.12c","type":"exact"}],"termid":"PR:O14281"}


id: PBO:0038582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 2","termid":"PBO:0038582"}


id: PBO:0028970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_copper_ion_starvation","termid":"PBO:0028970"}


id: PBO:0110366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR pathway substrate 8, signaling adaptor","termid":"PBO:0110366"}


id: PBO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Deb1/Rdp1","termid":"PBO:0002101"}


id: MONDO:0012104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lipodystrophy characterized by the association of lipoatrophy of the upper part of the body and lipohypertrophy of the thighs.","definition_xrefs":["Orphanet:79087"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"acquired lipodystrophy","termid":"MONDO:0020089"},{"relation_name":"is_a","term_name":"partial lipodystrophy","termid":"MONDO:0027767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"acquired partial lipodystrophy","secondary_identifiers":["SCTID:75659004","UMLS:C0220989","icd11.foundation:2042663302","MEDGEN:66352","GARD:10509","MESH:C562448","NCIT:C129723","NANDO:1200862"],"synonyms":[{"name":"APLD","type":"exact"},{"name":"APLD, susceptibility to","type":"related"},{"name":"Barraquer-Simons syndrome","type":"exact"},{"name":"acquired partial lipodystrophy","type":"exact"},{"name":"lipodystophy partial progressive","type":"related"},{"name":"lipodystrophy cephalothoracic type","type":"related"},{"name":"lipodystrophy partial acquired","type":"related"},{"name":"lipodystrophy, cephalothoracic type","type":"related"},{"name":"lipodystrophy, partial, acquired, susceptibility to","type":"related"},{"name":"lipodystrophy, partial, progressive","type":"related"},{"name":"partial acquired lipodystrophy","type":"exact"},{"name":"progressive cephalothoracic lipodystrophy","type":"exact"},{"name":"susceptibility to partial acquired lipodystrophy","type":"related"}],"termid":"MONDO:0012104","xrefs":{"Monarch":{"xref_id":"0012104"}}}


id: PR:O13848
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19G12.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADP-dependent indole-3-acetaldehyde reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.09","synonyms":[{"name":"AKR3C2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC19G12.09","type":"exact"}],"termid":"PR:O13848"}


id: GO:0060544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"regulates","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of necroptotic process","secondary_identifiers":["Reactome:R-HSA-5675482"],"synonyms":[{"name":"regulation of necroptosis","type":"narrow"}],"termid":"GO:0060544"}


id: PBO:0087063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L30; involved in pre-rRNA processing in the nucleolus; autoregulates splicing of its transcript; homologous to mammalian ribosomal protein L30, no bacterial homolog","termid":"PBO:0087063"}


id: SO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleic acid sequence that when read as sequential triplets, has the potential of encoding a sequential string of amino acids. It need not contain the start or stop codon.","definition_xrefs":["SGD:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reading_frame","secondary_identifiers":["http://en.wikipedia.org/wiki/Reading_frame"],"synonyms":[{"name":"reading frame","type":"exact"}],"termid":"SO:0000717"}


id: MONDO:0006568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kimura disease (obsolete MONDO:0006568)","termid":"MONDO:0006568","xrefs":{"Monarch":{"xref_id":"0006568"}}}


id: PBO:0070988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 12","termid":"PBO:0070988"}


id: PBO:0012545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein Lsh1 (predicted)","termid":"PBO:0012545"}


id: GO:0042373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals. Vitamin K substances share a methylated naphthoquinone ring structure and vary in the aliphatic side chains attached to the molecule.","definition_xrefs":["GOC:jl","PMID:24489112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"vitamin K metabolic process","secondary_identifiers":["Reactome:R-HSA-6806664"],"synonyms":[{"name":"naphthoquinone metabolic process","type":"broad"},{"name":"naphthoquinone metabolism","type":"broad"},{"name":"vitamin K metabolism","type":"exact"}],"termid":"GO:0042373"}


id: PBO:0069930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1223, pseudogene","termid":"PBO:0069930"}


id: PBO:0046288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 5","termid":"PBO:0046288"}


id: PBO:0074610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14B","termid":"PBO:0074610"}


id: MONDO:0014331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moyamoya disease with early-onset achalasia is an exceedingly rare autosomal recessive neurological disorder reported only in a few families so far. It is characterized by the association of early onset achalasia (manifesting in infancy) with severe intracranial angiopathy that is consistent with moyamoya angiopathy in most cases (moyamoya disease). Other variable associated manifestations include hypertension, Raynaud phenomenon, and livedo reticularis.","definition_xrefs":["Orphanet:401945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Moyamoya disease with early-onset achalasia","secondary_identifiers":["SCTID:718551002","MEDGEN:816733","OMIM:615750","UMLS:C3810403","GARD:17664"],"synonyms":[{"name":"MYMY6","type":"related"},{"name":"Moyamoya disease 6 with achalasia","type":"related"},{"name":"moyamoya 6 with achalasia","type":"exact"}],"termid":"MONDO:0014331","xrefs":{"Monarch":{"xref_id":"0014331"}}}


id: GO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.","definition_xrefs":["GOC:dph","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0005515","GO:0098772","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hormone activity","synonyms":[{"name":"cAMP generating peptide activity","type":"narrow"},{"name":"glycopeptide hormone","type":"narrow"},{"name":"lipopeptide hormone","type":"narrow"},{"name":"peptide hormone","type":"narrow"}],"termid":"GO:0005179"}


id: MONDO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystits which involves inflammation and formation of a dense fibrous false membrane on the mucous membrane of the bladder.","definition_xrefs":["PMID:18889690","DOID:13306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphtheritic cystitis","secondary_identifiers":["ICD10CM:A36.85","ICD9:032.84","MEDGEN:509093","SCTID:48278001","icd11.foundation:943460530","UMLS:C0152954"],"termid":"MONDO:0001681","xrefs":{"Monarch":{"xref_id":"0001681"}}}


id: PBO:0064535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase mitochondrial","termid":"PBO:0064535"}


id: GO:1905428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant organ formation.","definition_xrefs":["GOC:TermGenie","GOC:tb","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plant organ formation","termid":"GO:1905428"}


id: GO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-cis-sabinol + NAD+ = (1S,5S)-sabinone + H+ + NADH.","definition_xrefs":["EC:1.1.1.228","RHEA:18329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-sabinol dehydrogenase activity","secondary_identifiers":["MetaCyc:+-SABINOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03745"],"synonyms":[{"name":"(+)-cis-sabinol dehydrogenase activity","type":"related"},{"name":"(+)-cis-sabinol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047502"}


id: MONDO:0008842
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85171],"is_not":false,"summary":null,"term":"MONDO:0008842"}]},"cv_name":"mondo","definition":"A rare autosomal recessive cerebellar ataxia (ARCA), characterized by progressive cerebellar ataxia associated with oculomotor apraxia, severe neuropathy, and hypoalbuminemia.","definition_xrefs":["Orphanet:1168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ataxia-telangiectasia-like disorder","termid":"MONDO:0011457"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190","MONDO:0005559"],"is_obsolete":false,"name":"ataxia, early-onset, with oculomotor apraxia and hypoalbuminemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9283","NANDO:1200051","OMIM:208920","MEDGEN:395301","MESH:C538013","UMLS:C1859598","DOID:0050754"],"synonyms":[{"name":"AOA1","type":"exact"},{"name":"APTX oculomotor apraxia or related oculomotor disease","type":"exact"},{"name":"EAOH","type":"related"},{"name":"EOCA-HA","type":"related"},{"name":"ataxia with oculomotor apraxia type 1","type":"exact"},{"name":"ataxia, adult-onset, with oculomotor apraxia","type":"related"},{"name":"ataxia, early-onset, with oculomotor apraxia and hypoalbuminemia","type":"exact"},{"name":"ataxia-oculomotor apraxia 1","type":"related"},{"name":"ataxia-oculomotor apraxia syndrome","type":"related"},{"name":"ataxia-oculomotor apraxia type 1","type":"related"},{"name":"ataxia-telangiectasia-like syndrome","type":"related"},{"name":"cerebellar ataxia, early-onset, with hypoalbuminemia","type":"related"},{"name":"early-onset ataxia with oculomotor apraxia and hypoalbuminemia","type":"related"},{"name":"early-onset cerebellar ataxia with hypoalbuminemia","type":"related"},{"name":"oculomotor apraxia or related oculomotor disease caused by mutation in APTX","type":"exact"}],"termid":"MONDO:0008842","terms_by_termid":{"MONDO:0008842":null},"xrefs":{"Monarch":{"xref_id":"0008842"}}}


id: PBO:0049007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein hormone subunit beta 5","termid":"PBO:0049007"}


id: MONDO:0045017
data:
  {"annotated_genes":["SJAG_03509","SJAG_03024","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86372,86373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[86971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of cholesterol biosynthetic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"},{"relation_name":"is_a","term_name":"cholesterol metabolism disease","termid":"MONDO:0045008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03024":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"cholesterol biosynthetic process disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:575241","SCTID:238036004","UMLS:C0342829"],"synonyms":[{"name":"cholesterol synthesis disease","type":"exact"},{"name":"disorder of cholesterol biosynthetic process","type":"exact"},{"name":"disorder of cholesterol synthesis","type":"exact"}],"termid":"MONDO:0045017","terms_by_termid":{"MONDO:0010035":null,"MONDO:0011816":null},"xrefs":{"Monarch":{"xref_id":"0045017"}}}


id: PBO:0069011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 255, pseudogene","termid":"PBO:0069011"}


id: MONDO:1010504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, domestic cat","secondary_identifiers":["OMIA:001803-9685"],"termid":"MONDO:1010504","xrefs":{"Monarch":{"xref_id":"1010504"}}}


id: GO:0006011
data:
  {"annotated_genes":["SJAG_01209","SJAG_01089","SJAG_02178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72212,79840,108704],"is_not":false,"summary":null,"term":"GO:0006011"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-alpha-D-glucose, a substance composed of alpha-D-glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_01209":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-alpha-D-glucose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose metabolism","type":"exact"}],"termid":"GO:0006011","terms_by_termid":{"GO:0006011":null}}


id: GO:0072319
data:
  {"annotated_genes":["SJAG_05296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"}]},"cv_name":"biological_process","definition":"A protein depolymerization process that results in the disassembly of vesicle coat proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"vesicle uncoating","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"vesicle coat disassembly","type":"exact"}],"termid":"GO:0072319","terms_by_termid":{"GO:0072318":null}}


id: PBO:0072557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding B","termid":"PBO:0072557"}


id: MOD:01468
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide) (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:2211698","PubMed:8052647","PubMed:9036855","RESID:AA0248#CYS","Unimod:415","PubMed:14235557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-selenocysteine residue","termid":"MOD:02073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide) (Cys)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD+Delta:S(-1)Se(1)","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-selenocysteinyl-Se-molybdenum","type":"exact"},{"name":"formate dehydrogenase selenocysteine molybdenum cofactor","type":"exact"},{"name":"molybdopterin-se","type":"related"}],"termid":"MOD:01468"}


id: MONDO:1011207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypophosphatasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypophosphatasia, non-human animal","termid":"MONDO:1010316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatasia, dog","secondary_identifiers":["OMIA:002162-9615"],"termid":"MONDO:1011207","xrefs":{"Monarch":{"xref_id":"1011207"}}}


id: MONDO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete omphalocele (obsolete MONDO:0000753)","termid":"MONDO:0000753","xrefs":{"Monarch":{"xref_id":"0000753"}}}


id: PBO:0086170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for synthesis of diphthamide; required along with Dph1p, Kti11p, Jjj3p, and Dph5p; diphthamide is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); forms a complex with Dph1p that catalyzes the first step of diphthamide biosynthesis","termid":"PBO:0086170"}


id: PBO:0049845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 6","termid":"PBO:0049845"}


id: PBO:0065411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 8","termid":"PBO:0065411"}


id: PBO:0059175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRAP antisense RNA 1","termid":"PBO:0059175"}


id: GO:0005785
data:
  {"annotated_genes":["SJAG_01558","SJAG_00360"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68559,94037],"is_not":false,"summary":null,"term":"GO:0005785"}]},"cv_name":"cellular_component","definition":"A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00360":null,"SJAG_01558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle receptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"SR complex","type":"exact"},{"name":"docking protein complex","type":"related"}],"termid":"GO:0005785","terms_by_termid":{"GO:0005785":null}}


id: GO:2001121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a coenzyme gamma-F420-2.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme gamma-F420-2 metabolic process","termid":"GO:0052649"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"coenzyme gamma-F420-2 biosynthetic process","synonyms":[{"name":"coenzyme gamma-F420-2 biosynthesis","type":"exact"}],"termid":"GO:2001121"}


id: PR:Q10104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine hydroxymethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.04c","secondary_identifiers":["UniProtKB:Q10104"],"synonyms":[{"name":"SHMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SHMT2","type":"exact"},{"name":"glycine hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10104"}


id: MONDO:0009322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete halo nevi (obsolete MONDO:0009322)","secondary_identifiers":["OMIM:234300"],"termid":"MONDO:0009322","xrefs":{"Monarch":{"xref_id":"0009322"}}}


id: GO:0106335
data:
  {"annotated_genes":["SJAG_02042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72070],"is_not":false,"summary":null,"term":"GO:0106335"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(carboxymethyl)uridine34 in tRNA + S-adenosyl-L-methionine = 5-(2-methoxy-2-oxoethyl)uridine34 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:20123966","RHEA:43208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02042":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0016741","GO:0140098","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.1.1.229"],"termid":"GO:0106335","terms_by_termid":{"GO:0106335":null}}


id: PR:Q10268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mac1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-anchored protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.04c","synonyms":[{"name":"Spom972h-mac1","type":"exact"}],"termid":"PR:Q10268"}


id: PBO:0065667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type O","termid":"PBO:0065667"}


id: MONDO:0005638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by the lack of ability to recognize individuals, objects, shapes, sounds, or smells. There is no loss of memory. It is caused by neurological damage in the brain, specifically in the occipital or parietal lobes.","definition_xrefs":["NCIT:C84542"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"communication disorder","termid":"MONDO:0002182"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agnosia","secondary_identifiers":["UMLS:C0001816","MESH:D001072","SCTID:68345001","DOID:4090","EFO:0007136","ICD10CM:R48.2","ICD10CM:R48.1","icd11.foundation:1315065296","MESH:D000377","MEDGEN:174"],"synonyms":[{"name":"Monomodal visual amnesia","type":"narrow"},{"name":"agnosia","type":"exact"},{"name":"dyspraxia (finding)","type":"related"},{"name":"dyspraxia syndrome","type":"related"},{"name":"primary visual agnosia","type":"narrow"},{"name":"visual amnesia","type":"narrow"}],"termid":"MONDO:0005638","xrefs":{"Monarch":{"xref_id":"0005638"}}}


id: GO:0042673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"},{"relation_name":"regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"}


id: GO:0102176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cycloeucalenone + NADPH + H+ = cycloeucalenol + NADP.","definition_xrefs":["GOC:pz","PMID:4387005"],"gene_count":0,"genotype_count":0,"name":"obsolete cycloeucalenone reductase activity (obsolete GO:0102176)","termid":"GO:0102176"}


id: PBO:0057707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1294","termid":"PBO:0057707"}


id: PBO:0069953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1246, pseudogene","termid":"PBO:0069953"}


id: PBO:0082203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; involved in O- and N-linked protein glycosylation; type II membrane protein; member of the KRE2/MNT1 mannosyltransferase family; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0082203"}


id: MONDO:0020300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A seizure disorder characterized by intermittent dystonia and/or choreoathetoid movements that occur during sleep. The clusters of nocturnal motor seizures are often stereotyped and brief.","definition_xrefs":["Orphanet:98784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe epilepsy","termid":"MONDO:0002612"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy","secondary_identifiers":["ICD9:345.80","SCTID:698021005","DOID:0060681","MEDGEN:777188","GARD:11918","UMLS:C3696898","MESH:C579932","icd11.foundation:1004734747"],"synonyms":[{"name":"ADNFLE","type":"exact"},{"name":"ENFL","type":"exact"}],"termid":"MONDO:0020300","xrefs":{"Monarch":{"xref_id":"0020300"}}}


id: MONDO:0009123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare primary monoamine neurotransmitter synthesis disorder with norepinephrine and adrenaline deficiency that leads to young-onset severe orthostatic hypotension and eyelid ptosis.","definition_xrefs":["Orphanet:230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of catecholamine synthesis","termid":"MONDO:0017759"},{"relation_name":"is_a","term_name":"inherited orthostatic hypotension","termid":"MONDO:0021272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"orthostatic hypotension 1","secondary_identifiers":["MEDGEN:1648402","ICD9:270.8","GARD:1903","NANDO:2200597","SCTID:237923004","DOID:0090145","UMLS:C4746777","MESH:C535600","OMIM:223360"],"synonyms":[{"name":"congenital dopamine beta-hydroxylase deficiency","type":"exact"},{"name":"dopamine BETA-HYDROXYLASE deficiency, congenital","type":"related"},{"name":"dopamine beta hydroxylase deficiency","type":"related"},{"name":"dopamine beta-hydroxylase deficiency","type":"exact"},{"name":"noradrenaline deficiency","type":"exact"},{"name":"norepinephrine deficiency","type":"exact"},{"name":"orthostatic hypotension 1, due to DBH deficiency","type":"exact"}],"termid":"MONDO:0009123","xrefs":{"Monarch":{"xref_id":"0009123"}}}


id: FYPO:0000419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic cytokinesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased rate of cytokinesis","synonyms":[{"name":"cytokinesis: decreased rate","type":"related"},{"name":"decreased rate of cytokinesis during mitotic cell cycle","type":"related"},{"name":"decreased rate of cytokinesis during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic cytokinesis","type":"exact"},{"name":"reduced rate of cytokinesis","type":"exact"}],"termid":"FYPO:0000419"}


id: GO:0098684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribbon synapse between a retinal photoreceptor cell (rod or cone) and a retinal bipolar cell. These contain a plate-like synaptic ribbon.","definition_xrefs":["PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribbon synapse","termid":"GO:0097470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor ribbon synapse","termid":"GO:0098684"}


id: GO:0042983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta, a glycoprotein associated with Alzheimer's disease.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"amyloid precursor protein metabolic process","termid":"GO:0042982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid precursor protein biosynthetic process","synonyms":[{"name":"APP biosynthesis","type":"exact"},{"name":"APP biosynthetic process","type":"exact"},{"name":"amyloid precursor protein anabolism","type":"exact"},{"name":"amyloid precursor protein biosynthesis","type":"exact"},{"name":"amyloid precursor protein formation","type":"exact"},{"name":"amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042983"}


id: PBO:0079880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 1B","termid":"PBO:0079880"}


id: PATO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with small spots, patches, or specks of hue or degree of saturation differing from that of the background.","definition_xrefs":["merriam-webster.:merriam-webster."],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dappled","synonyms":[{"name":"speckled","type":"related"}],"termid":"PATO:0001535"}


id: GO:0051344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of cyclic nucleotide phosphodiesterase activity, the catalysis of the reaction: nucleotide 3',5'-cyclic phosphate + H2O = nucleotide 5'-phosphate.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclic-nucleotide phosphodiesterase activity","synonyms":[{"name":"3',5' cyclic nucleotide phosphodiesterase inhibitor","type":"exact"},{"name":"3',5'-cyclic-AMP phosphodiesterase inhibitor","type":"narrow"},{"name":"cAMP phosphodiesterase inhibitor","type":"narrow"},{"name":"down regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"down-regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"downregulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"inhibition of cyclic nucleotide phosphodiesterase activity","type":"narrow"},{"name":"negative regulation of 3',5' cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"negative regulation of 3',5'-cyclic-AMP phosphodiesterase activity","type":"narrow"},{"name":"negative regulation of cAMP phosphodiesterase activity","type":"narrow"},{"name":"negative regulation of cGMP phosphodiesterase activity","type":"narrow"},{"name":"negative regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"phosphodiesterase inhibitor","type":"related"}],"termid":"GO:0051344"}


id: FYPO:0007027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to medial cortex, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007027"}


id: PBO:0063559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase family member 3","termid":"PBO:0063559"}


id: PBO:0090858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine cyclodeaminase-like protein","termid":"PBO:0090858"}


id: PR:Q9Y7Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop16 gene.","definition_xrefs":["UniProtKB:Q9Y7Z1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.10","synonyms":[{"name":"Spom972h-nop16","type":"exact"}],"termid":"PR:Q9Y7Z1"}


id: PBO:0011168
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galacose specific flocculation","termid":"PBO:0011168"}


id: FYPO:0005034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during nitrogen starvation","synonyms":[{"name":"decreased protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased protein phosphorylation during nitrogen depletion","type":"exact"},{"name":"decreased protein phosphorylation during nitrogen deprivation","type":"exact"},{"name":"reduced protein phosphorylation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005034"}


id: GO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the trimethylguanosine (m(3)(2,2,7)-GTP) group located at the 5' end of some RNA molecules. Such trimethylated cap structures, generally produced by posttranscriptional modification of a 7-methylguanosine cap, are often found on snRNAs and snoRNAs transcribed by RNA polymerase II, but have also be found on snRNAs transcribed by RNA polymerase III. They have also been found on a subset of the mRNA population in some species, e.g. C. elegans.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"RNA trimethylguanosine cap binding","synonyms":[{"name":"RNA m2,2,7G cap binding","type":"exact"}],"termid":"GO:0000341"}


id: PBO:0047443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor Ib, pseudogene","termid":"PBO:0047443"}


id: GO:0032933
data:
  {"annotated_genes":["SJAG_03501","SJAG_03302","SJAG_01657","SJAG_04018","SJAG_04573","SJAG_05286","SJAG_02703","SJAG_00642","SJAG_02104","SJAG_04384","SJAG_00718","SJAG_01585","SJAG_00293","SJAG_03345","SJAG_05304","SJAG_04151","SJAG_01253","SJAG_01150","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63561,64666,68322,88733,89012,89398,92399,93645,101899,103761,112362,112618,116203,118044,118252],"is_not":false,"summary":null,"term":"GO:0032933"},{"annotations":[90994,105696,111510],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[78126],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"The series of molecular signals from the endoplasmic reticulum to the nucleus generated as a consequence of decreased levels of one or more sterols (and in some yeast, changes in oxygen levels) and which proceeds through activation of a sterol response element binding transcription factor (SREBP) to result in up-regulation of target gene transcription.","definition_xrefs":["GOC:vw","GOC:signaling","PMID:12923525","GOC:mah","PMID:22017871","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"cellular response to sterol depletion","termid":"GO:0071501"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006994","GO:0030967","GO:0035104"],"synonyms":[{"name":"ER to nucleus sterol response pathway","type":"exact"},{"name":"ER-nuclear sterol response pathway","type":"exact"},{"name":"SREBP signalling","type":"exact"},{"name":"SREBP target gene transcriptional activation","type":"exact"},{"name":"SREBP-mediated signaling pathway","type":"related"},{"name":"SREBP-mediated signalling pathway","type":"exact"},{"name":"activation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"endoplasmic reticulum to nucleus sterol response pathway","type":"exact"},{"name":"endoplasmic reticulum-nuclear sterol response pathway","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription involved in sterol depletion response","type":"exact"},{"name":"positive regulation of transcription via sterol regulatory element binding","type":"narrow"},{"name":"positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway","type":"narrow"},{"name":"sterol depletion response, SREBP target gene transcriptional activation","type":"exact"},{"name":"sterol regulatory element binding protein target gene transcriptional activation","type":"broad"},{"name":"sterol response element binding protein signaling pathway","type":"exact"},{"name":"stimulation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"up regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein target gene transcription","type":"exact"}],"termid":"GO:0032933","terms_by_termid":{"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: PBO:0061268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA1 divergent transcript","termid":"PBO:0061268"}


id: PBO:0074222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 1","termid":"PBO:0074222"}


id: GO:0030658
data:
  {"annotated_genes":["SJAG_04513","SJAG_00284","SJAG_02349","SJAG_01633","SJAG_01939","SJAG_00906","SJAG_02282","SJAG_04517","SJAG_00557","SJAG_02539","SJAG_05344","SJAG_04023","SJAG_03558","SJAG_00072","SJAG_03153","SJAG_01809","SJAG_04565","SJAG_04609","SJAG_03907","SJAG_05345","SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112581,112797,61895,77525],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58434,65172],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[72749,76789,74507,78136,75277,95270,76248,71091,71032,74862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[66947,70074,75723,100863,73551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a transport vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"transport vesicle","termid":"GO:0030133"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"transport vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"secretory vesicle membrane","type":"broad"}],"termid":"GO:0030658","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030127":null,"GO:0030130":null}}


id: PBO:0088842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex subunit Rqc2","termid":"PBO:0088842"}


id: GO:0010418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the backbone structure of pectic rhamnogalacturonan II. The back bone contains at least 8 1,4-linked alpha-D-GalpA residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogalacturonan metabolic process","termid":"GO:0010394"},{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan II backbone metabolic process","synonyms":[{"name":"rhamnogalacturonan II backbone metabolism","type":"exact"}],"termid":"GO:0010418"}


id: PBO:0056332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 13","termid":"PBO:0056332"}


id: PBO:0068484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 65, pseudogene","termid":"PBO:0068484"}


id: PBO:0061313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 4","termid":"PBO:0061313"}


id: PBO:0040042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor nuclear translocator 2","termid":"PBO:0040042"}


id: PBO:0055365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2794","termid":"PBO:0055365"}


id: PBO:0083444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified essential ORF SPC110/YDR356W","termid":"PBO:0083444"}


id: PBO:0080488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 7","termid":"PBO:0080488"}


id: PBO:0048372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAR1 divergent transcript","termid":"PBO:0048372"}


id: PBO:0055604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3042","termid":"PBO:0055604"}


id: MONDO:0018330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucinous adenocarcinoma of the appendix is a very rare, slow growing, well-differentiated epithelial neoplasm of the appendix characterized by abundant mucin production. Clinically, it presents as acute appendicitis (with abdominal pain, fever, leukocytosis) or as pseudomyxoma peritonei (wide-spread presence of mucin within the peritoneal cavity), however some patients may be completely asymptomatic at the time of diagnosis. In many cases, a second gastrointestinal malignancy is present.","definition_xrefs":["Orphanet:391723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon mucinous adenocarcinoma","termid":"MONDO:0005007"},{"relation_name":"is_a","term_name":"appendix adenocarcinoma","termid":"MONDO:0006087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"mucinous adenocarcinoma of the appendix","secondary_identifiers":["ONCOTREE:MAAP","MEDGEN:317382","UMLS:C1706832","NCIT:C43558","GARD:21629","icd11.foundation:425095558"],"synonyms":[{"name":"appendiceal mucinous adenocarcinoma","type":"exact"},{"name":"appendix mucinous adenocarcinoma","type":"exact"},{"name":"vermiform appendix mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0018330","xrefs":{"Monarch":{"xref_id":"0018330"}}}


id: GO:0033729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavan-3-ol + 2 NAD(P)+ = an anthocyanidin + 2 NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"anthocyanidin reductase activity","secondary_identifiers":["MetaCyc:RXN-10693"],"synonyms":[{"name":"ANR","type":"related"},{"name":"AtANR","type":"related"},{"name":"MtANR","type":"related"},{"name":"flavan-3-ol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0033729"}


id: GO:0030296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"protein tyrosine kinase activator activity","termid":"GO:0030296"}


id: SO:0000927
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a AU dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000927 insert_AU (obsolete SO:0000927)","synonyms":[{"name":"insert AU","type":"exact"}],"termid":"SO:0000927"}


id: PBO:0046477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 2, TFIIH core complex helicase subunit","termid":"PBO:0046477"}


id: MOD:00225
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(6-FMN)-L-cysteine.","definition_xrefs":["PubMed:1551870","RESID:AA0220","PubMed:620783","PubMed:10869173","Unimod:409#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(6-FMN)-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-[6-riboflavin 5'-dihydrogen phosphate]sulfanylpropanoic acid","type":"exact"},{"name":"6-[S-cysteinyl]FMN","type":"exact"},{"name":"6-[S-cysteinyl]flavin mononucleotide","type":"exact"},{"name":"FMNH","type":"related"},{"name":"MOD_RES S-6-FMN cysteine","type":"exact"},{"name":"S-(6-FMN)-L-cysteine","type":"exact"},{"name":"S6FMNCys","type":"exact"},{"name":"flavin mononucleotide","type":"related"}],"termid":"MOD:00225"}


id: GO:0004861
data:
  {"annotated_genes":["SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108698],"is_not":false,"summary":null,"term":"GO:0004861"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cyclin-dependent protein serine/threonine kinase.","definition_xrefs":["GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein serine/threonine kinase regulator activity","termid":"GO:0016538"},{"relation_name":"is_a","term_name":"protein serine/threonine kinase inhibitor activity","termid":"GO:0030291"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0140678","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-187934","Reactome:R-HSA-69562"],"synonyms":[{"name":"CDK inhibitor","type":"related"},{"name":"cyclin dependent kinase inhibitor","type":"related"},{"name":"cyclin dependent protein kinase inhibitor activity","type":"exact"},{"name":"cyclin-dependent kinase inhibitor","type":"related"},{"name":"cyclin-dependent protein kinase inhibitor activity","type":"broad"}],"termid":"GO:0004861","terms_by_termid":{"GO:0004861":null}}


id: GO:0047454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phaseollidin hydrate = H2O + phaseollidin.","definition_xrefs":["RHEA:19769","EC:4.2.1.97"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phaseollidin hydratase activity","secondary_identifiers":["KEGG_REACTION:R04728","MetaCyc:4.2.1.97-RXN"],"synonyms":[{"name":"phaseollidin-hydrate hydro-lyase (phaseollidin-forming)","type":"related"},{"name":"phaseollidin-hydrate hydro-lyase activity","type":"related"}],"termid":"GO:0047454"}


id: MONDO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the skull.","direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"skull cancer","secondary_identifiers":["NCIT:C155790","UMLS:C2062986","DOID:1863","SCTID:126538005","MEDGEN:1662558"],"synonyms":[{"name":"cancer of skull","type":"exact"},{"name":"malignant neoplasm of skull","type":"exact"},{"name":"malignant skull neoplasm","type":"exact"},{"name":"skull cancer","type":"exact"}],"termid":"MONDO:0002132","xrefs":{"Monarch":{"xref_id":"0002132"}}}


id: MONDO:0002685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choroid plexus carcinoma that occurs during childhood.","definition_xrefs":["NCIT:C124292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial cancer","termid":"MONDO:0002071"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"choroid plexus carcinoma","termid":"MONDO:0016718"},{"relation_name":"is_a","term_name":"childhood choroid plexus neoplasm","termid":"MONDO:0024744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood choroid plexus carcinoma","secondary_identifiers":["DOID:3545","MEDGEN:901899","UMLS:C1510426"],"synonyms":[{"name":"childhood choroid plexus cancer","type":"related"},{"name":"childhood choroid plexus carcinoma","type":"exact"},{"name":"childhood choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus carcinoma of childhood","type":"exact"},{"name":"paediatric choroid plexus carcinoma","type":"exact"},{"name":"pediatric choroid plexus carcinoma","type":"exact"}],"termid":"MONDO:0002685","xrefs":{"Monarch":{"xref_id":"0002685"}}}


id: PBO:0089296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine phosphoribosyltransferase (APRT) Apt1","termid":"PBO:0089296"}


id: GO:0009442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways by which allantoin is processed and converted to ureidoglycolate, and then into metabolically useful substrates. E. coli are able to utilize allantoin as a sole nitrogen source under anaerobic conditions by converting it to ureidoglycolate; this may be further metabolized to produce glyoxylate and thence 3-phosphoglycerate, or alternatively oxidized to oxolureate, which can converted into oxamate and carbamoylphosphate. This may then be further metabolized to CO2, NH4+ and ATP.","definition_xrefs":["MetaCyc:PWY0-41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin catabolic process","termid":"GO:0000256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin assimilation pathway","synonyms":[{"name":"allantoin catabolic process via ureidoglycolate","type":"exact"},{"name":"allantoin catabolism via ureidoglycolate","type":"exact"},{"name":"allantoin degradation pathway","type":"related"}],"termid":"GO:0009442"}


id: PBO:0036125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing_during_vegetative_growth","termid":"PBO:0036125"}


id: MONDO:0004284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant cystic nephroma (obsolete MONDO:0004284)","termid":"MONDO:0004284","xrefs":{"Monarch":{"xref_id":"0004284"}}}


id: MONDO:0030913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 48","secondary_identifiers":["GARD:17924","OMIM:617751","UMLS:C4540321","DOID:0080235","MEDGEN:1619532","Orphanet:500159"],"synonyms":[{"name":"MRD48","type":"related"},{"name":"autosomal dominant intellectual disability 48","type":"related"},{"name":"autosomal dominant mental retardation 48","type":"related"},{"name":"intellectual disability, autosomal dominant 48","type":"exact"},{"name":"mental retardation, autosomal dominant 48","type":"related"},{"name":"microcephaly-corpus callosum and cerebellar vermis hypoplasia-facial dysmorphism-intellectual disability syndrom","type":"related"}],"termid":"MONDO:0030913","xrefs":{"Monarch":{"xref_id":"0030913"}}}


id: PBO:0012859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp45","termid":"PBO:0012859"}


id: PBO:0058215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4507","termid":"PBO:0058215"}


id: RO:HOM0000054
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves functional equivalent genes with retention of the ancestral function.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_equivalogy_relationship_with","termid":"RO:HOM0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_isoorthology_relationship_with","synonyms":[{"name":"isoorthologous to","type":"exact"}],"termid":"RO:HOM0000054"}


id: PBO:0053358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265","termid":"PBO:0053358"}


id: PBO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CuSE 5'-[ACT]T[ACT]NNGCTG[AGT]-3'","termid":"PBO:0000339"}


id: PBO:0067055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 76, pseudogene","termid":"PBO:0067055"}


id: GO:0090665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing at least one glycosylated protein, may be held together by both covalent and noncovalent bonds.","definition_xrefs":["GOC:pf","PMID:8662961","PMID:7693675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glycoprotein complex","termid":"GO:0090665"}


id: GO:0019840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"isoprenoid binding","termid":"GO:0019840"}


id: MONDO:0015392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasal glial heterotopia is a rare developmental abnormality presenting usually at birth or in early childhood (rarely in adulthood) as a benign, non-pulsatile mass that can lead to nasal obstruction, deformation of the septum and nasal bone, and respiratory distress if untreated. Nasal glial heterotopias have no communication with the central nervous system; however an associated defect in the cribriform plate is sometimes reported.","definition_xrefs":["Orphanet:141112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal glial heterotopia","secondary_identifiers":["icd11.foundation:1449384774","GARD:19949","ICD9:748.1","UMLS:C0266490","MEDGEN:539951","SCTID:5645008"],"synonyms":[{"name":"nasal glioma","type":"exact"}],"termid":"MONDO:0015392","xrefs":{"Monarch":{"xref_id":"0015392"}}}


id: PBO:0047386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 24","termid":"PBO:0047386"}


id: MOD:01101
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because erroneous and apparently redundant to MOD:00111. Remap to MOD:00111.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01101 S-Farnesyl- (obsolete MOD:01101)","termid":"MOD:01101"}


id: FYPO:0005606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to double-strand break site","synonyms":[{"name":"delayed onset of protein localisation to double-strand break site","type":"exact"},{"name":"delayed onset of protein localization to DSB site","type":"exact"},{"name":"delayed onset of protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"delayed onset of protein localization to site of double-strand break","type":"exact"},{"name":"delayed protein localization to double-strand break site","type":"exact"}],"termid":"FYPO:0005606"}


id: MONDO:0020493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Haddad syndrome is a rare congenital disorder in which congenital central hypoventilation syndrome (CCHS), or Ondine syndrome, occurs concurrently with Hirschsprung disease.","definition_xrefs":["Orphanet:99803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Haddad syndrome","secondary_identifiers":["ICD10CM:G47.3","icd11.foundation:1685926536","MEDGEN:347052","SCTID:719972004","UMLS:C1859049","GARD:16909"],"synonyms":[{"name":"Haddad syndrome","type":"exact"},{"name":"congenital central alveolar hypoventilation-Hirschsprung disease syndrome","type":"exact"},{"name":"ondine-Hirschsprung disease","type":"exact"},{"name":"ondine-Hirschsprung syndrome","type":"exact"}],"termid":"MONDO:0020493","xrefs":{"Monarch":{"xref_id":"0020493"}}}


id: MONDO:0020203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmented conjunctival lesion (obsolete MONDO:0020203)","secondary_identifiers":["Orphanet:98615"],"termid":"MONDO:0020203","xrefs":{"Monarch":{"xref_id":"0020203"}}}


id: PBO:0054488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1888","termid":"PBO:0054488"}


id: MONDO:1012407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acral mutilation syndrome, non-human animal","termid":"MONDO:1011884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acral mutilation syndrome, dog","secondary_identifiers":["OMIA:001514-9615"],"termid":"MONDO:1012407","xrefs":{"Monarch":{"xref_id":"1012407"}}}


id: PBO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delayed minus-Nitrogen Induction","termid":"PBO:0001829"}


id: PBO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MID1","termid":"PBO:0016516"}


id: PBO:0004238
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systematic ID does not reflect chromosome","termid":"PBO:0004238"}


id: MONDO:0014146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant hypocalcemia disease that has material basis in heterozygous mutation in the GNA11 gene on chromosome 19p13.","definition_xrefs":["DOID:0090108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypocalcemia","termid":"MONDO:0018543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant hypocalcemia 2","secondary_identifiers":["OMIM:615361","GARD:15951","MEDGEN:815573","UMLS:C3809243"],"synonyms":[{"name":"HYPOC2","type":"exact"},{"name":"autosomal dominant hypocalcemia type 2","type":"exact"},{"name":"hypocalcemia, autosomal dominant 2","type":"related"},{"name":"hypocalcemia, autosomal dominant type 2","type":"exact"}],"termid":"MONDO:0014146","xrefs":{"Monarch":{"xref_id":"0014146"}}}


id: PBO:0091033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd2","termid":"PBO:0091033"}


id: PBO:0063133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0063133"}


id: MONDO:0003862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant peripheral nerve sheath tumor characterized by the presence of malignant cells that contain melanin and formation of psammoma bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant melanocytic neoplasm of the peripheral nerve sheath","termid":"MONDO:0003863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"melanotic psammomatous malignant peripheral nerve sheath tumor","secondary_identifiers":["MEDGEN:730167","NCIT:C6910","UMLS:C1321709","DOID:6344"],"synonyms":[{"name":"melanocytic psammomatous MPNST","type":"exact"},{"name":"melanocytic psammomatous malignant peripheral nerve sheath tumor","type":"exact"},{"name":"melanocytic psammomatous malignant peripheral nerve sheath tumour","type":"exact"},{"name":"melanotic psammomatous malignant peripheral nerve sheath tumor","type":"exact"}],"termid":"MONDO:0003862","xrefs":{"Monarch":{"xref_id":"0003862"}}}


id: PBO:0060598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit D3","termid":"PBO:0060598"}


id: GO:1990211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml","PMID:14617079","PMID:16553894"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of jasmonic acid levels in host (obsolete GO:1990211)","termid":"GO:1990211"}


id: MONDO:0013351
data:
  {"annotated_genes":["SJAG_00904"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86808],"is_not":false,"summary":null,"term":"MONDO:0013351"}]},"cv_name":"mondo","definition":"Infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly is a rare, central nervous system malformation syndrome characterized by progressive microcephaly with profound motor delay and intellectual disability, associated with hypertonia, spasticity, clonus, and seizures, with brain imaging revealing severe cerebral and cerebellar atrophy, and poor myelination.","definition_xrefs":["Orphanet:402364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00904":null},"genotype_count":0,"is_obsolete":false,"name":"infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462271","DOID:0111262","GARD:10995","OMIM:613668","UMLS:C3150921"],"synonyms":[{"name":"microcephaly, postnatal progressive, with seizures and brain atrophy","type":"related"},{"name":"postnatal progressive microcephaly, seizures, and brain atrophy","type":"related"}],"termid":"MONDO:0013351","terms_by_termid":{"MONDO:0013351":null},"xrefs":{"Monarch":{"xref_id":"0013351"}}}


id: PBO:0084610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YGL210W-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGL211W","termid":"PBO:0084610"}


id: PBO:0116692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR548BA host gene","termid":"PBO:0116692"}


id: PBO:0063697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 1 pseudogene 1","termid":"PBO:0063697"}


id: PBO:0044087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A7","termid":"PBO:0044087"}


id: GO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homo- or hetero-pentameric protein complex that forms a transmembrane channel through which ions may pass in response to acetylcholine binding.","definition_xrefs":["GOC:bf","PMID:12381728","GOC:mah","PMID:15579462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"acetylcholine-gated channel complex","synonyms":[{"name":"nicotinic acetylcholine receptor","type":"broad"},{"name":"nicotinic acetylcholine-gated receptor-channel complex","type":"exact"}],"termid":"GO:0005892"}


id: MONDO:0013373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PSEN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1V","secondary_identifiers":["OMIM:613697","MESH:C566856","UMLS:C3150958","GARD:15690","DOID:0110427","MEDGEN:462308"],"synonyms":[{"name":"CMD1V","type":"exact"},{"name":"PSEN2 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1V","type":"related"},{"name":"cardiomyopathy, dilated, type 1V","type":"exact"},{"name":"dilated cardiomyopathy type 1V","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PSEN2","type":"exact"}],"termid":"MONDO:0013373","xrefs":{"Monarch":{"xref_id":"0013373"}}}


id: MONDO:0800294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive encephalomyelitis with rigidity (obsolete MONDO:0800294)","termid":"MONDO:0800294","xrefs":{"Monarch":{"xref_id":"0800294"}}}


id: GO:0045168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at long or short range between cells that results in the commitment of a cell to a certain fate.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in cell fate commitment","synonyms":[{"name":"cell fate commitment, cell-cell signaling","type":"exact"},{"name":"cell fate commitment, cell-cell signalling","type":"exact"},{"name":"cell-cell signaling during in cell fate commitment","type":"exact"},{"name":"cell-cell signaling resulting in cell fate commitment","type":"exact"},{"name":"cell-cell signalling during cell fate commitment","type":"exact"},{"name":"cell-cell signalling involved in cell fate specification","type":"narrow"},{"name":"cell-cell signalling resulting in cell fate commitment","type":"exact"}],"termid":"GO:0045168"}


id: PBO:0044606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12","termid":"PBO:0044606"}


id: GO:0045026
data:
  {"annotated_genes":["SJAG_02351","SJAG_02924","SJAG_00870","SJAG_04887","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95051,92112,77615,96132,109992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane that surround a cell with that of another cell, producing a single cell.","definition_xrefs":["GOC:mtg_muscle","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00870":null,"SJAG_02351":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006947"],"synonyms":[{"name":"cell fusion","type":"broad"},{"name":"cell-cell fusion","type":"broad"}],"termid":"GO:0045026","terms_by_termid":{"GO:0032220":null}}


id: GO:1904507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["GOC:nc","GOC:TermGenie","PMID:22579284","GOC:BHF","GO_REF:0000058","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance in response to DNA damage","termid":"GO:1904505"},{"relation_name":"positively_regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"positive regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"activation of DNA damage response, telomere maintenance","type":"narrow"},{"name":"activation of telomere maintenance in response to DNA damage","type":"narrow"},{"name":"positive regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"up-regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"upregulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance in response to DNA damage","type":"exact"}],"termid":"GO:1904507"}


id: MONDO:0014369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postaxial polydactyly-anterior pituitary anomalies-facial dysmorphism syndrome is a rare, genetic developmental defect during embryogenesis characterized primarily by congenital hypopituitarism and/or postaxial polydactyly. It can be associated with short stature, delayed bone age, hypogonadotropic hypogonadism, and/or midline facial defects (e.g. hypotelorism, mild midface hypoplasia, flat nasal bridge, and cleft lip and/or palate). Hypoplastic anterior pituitary and ectopic posterior pituitary lobe are frequent findings on MRI examination.","definition_xrefs":["Orphanet:420584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"postaxial polydactyly-anterior pituitary anomalies-facial dysmorphism syndrome","secondary_identifiers":["GARD:13349","OMIM:615849","UMLS:C4014479","DOID:0080328","MEDGEN:862916"],"synonyms":[{"name":"CJS","type":"related"},{"name":"Culler-Jones syndrome","type":"related"},{"name":"Pallister-Hall syndrome 2","type":"related"},{"name":"Pallister-Hall syndrome 2, formerly","type":"related"}],"termid":"MONDO:0014369","xrefs":{"Monarch":{"xref_id":"0014369"}}}


id: PBO:0057339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 525","termid":"PBO:0057339"}


id: PBO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034463"}


id: PBO:0089556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA 2'-O-methyltransferase fibrillarin-like","termid":"PBO:0089556"}


id: GO:0022829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of propanediol through a large pore, un-gated channel. Examples include gap junctions, which transport substances from one cell to another; and porins which transport substances in and out of bacteria, mitochondria and chloroplasts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"wide pore channel activity","synonyms":[{"name":"gap junction activity","type":"narrow"},{"name":"non-gated, wide pore channel activity","type":"exact"}],"termid":"GO:0022829"}


id: MONDO:0011460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arrhythmogenic right ventricular dysplasia associated with variation in the region 10p14-p12.","definition_xrefs":["PMID:10631146","DOID:0110075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 6","secondary_identifiers":["MEDGEN:346892","OMIM:604401","UMLS:C1858378","MESH:C565775"],"synonyms":[{"name":"ARVC6","type":"exact"},{"name":"ARVD6","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 6","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 6","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 6","type":"related"},{"name":"familial arrhythmogenic right ventricular dysplasia 6","type":"exact"}],"termid":"MONDO:0011460","xrefs":{"Monarch":{"xref_id":"0011460"}}}


id: GO:0017081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a chloride channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"chloride channel regulator activity","secondary_identifiers":["Reactome:R-HSA-383190"],"termid":"GO:0017081"}


id: FYPO:0003437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein kinase activity during mitotic G1 phase","synonyms":[{"name":"protein kinase activity abolished during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0003437"}


id: PR:P79088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec61 subunit alpha isoform 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec61 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.02c","secondary_identifiers":["UniProtKB:P79088"],"synonyms":[{"name":"Spom972h-SEC61A1","type":"exact"}],"termid":"PR:P79088"}


id: GO:0035629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Addition of a carbohydrate or carbohydrate derivative unit via a nitrogen (N) atom of the N-terminal amino acid of a protein.","definition_xrefs":["GOC:pr","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal protein amino acid N-linked glycosylation (obsolete GO:0035629)","termid":"GO:0035629"}


id: PR:O43024
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- def1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain-containing protein C354.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.10","synonyms":[{"name":"Spom972h-def1","type":"exact"}],"termid":"PR:O43024"}


id: PBO:0074819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18B","termid":"PBO:0074819"}


id: MONDO:0009458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multisystem disorder characterized by spondyloepiphyseal dysplasia and disproportionate short stature, facial dysmorphism, T-cell immunodeficiency, and glomerulonephritis with nephrotic syndrome.","definition_xrefs":["Orphanet:1830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immuno-osseous dysplasia","termid":"MONDO:0015708"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005497"],"is_obsolete":false,"name":"Schimke immuno-osseous dysplasia","secondary_identifiers":["GARD:4984","MEDGEN:164078","MedDRA:10048699","NANDO:2200711","SCTID:723995003","DOID:0060490","NANDO:1200337","NCIT:C135087","MESH:C536629","icd11.foundation:2002226225","NORD:1691","UMLS:C0877024","OMIM:242900"],"synonyms":[{"name":"IMMUNOOSSEOUS dysplasia, Schimke type","type":"related"},{"name":"SIOD","type":"related"},{"name":"Schimke IMMUNOOSSEOUS dysplasia","type":"related"},{"name":"Schimke Immunoosseous dysplasia","type":"related"},{"name":"Schimke immuno-osseous dysplasia","type":"exact"},{"name":"Schimke immunoosseous dysplasia","type":"exact"},{"name":"Schimke syndrome","type":"exact"},{"name":"immunoosseous dysplasia Schimke type","type":"exact"},{"name":"spondyloepiphyseal dysplasia - nephrotic syndrome","type":"exact"},{"name":"spondyloepiphyseal dysplasia nephrotic syndrome","type":"related"},{"name":"spondyloepiphyseal dysplasia-nephrotic syndrome","type":"exact"}],"termid":"MONDO:0009458","xrefs":{"Monarch":{"xref_id":"0009458"}}}


id: PBO:0066673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras like without CAAX 2","termid":"PBO:0066673"}


id: PBO:0071318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 2","termid":"PBO:0071318"}


id: MONDO:0006020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Zollinger-Ellison syndrome (obsolete MONDO:0006020)","synonyms":[{"name":"obsolete Zollinger-Ellison syndrome (disease)","type":"exact"}],"termid":"MONDO:0006020","xrefs":{"Monarch":{"xref_id":"0006020"}}}


id: PBO:0030731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_vegetative_cell_with_central_constriction","termid":"PBO:0030731"}


id: GO:0031698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-2 adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"beta-2 adrenergic receptor binding","synonyms":[{"name":"beta-2 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031698"}


id: PBO:0050515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXD cluster antisense RNA 2","termid":"PBO:0050515"}


id: MONDO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe condition resulting from bacteria invading healthy muscle from adjacent traumatized muscle or soft tissue. The infection originates in a wound contaminated with bacteria of the genus clostridium. C. perfringens accounts for the majority of cases (over eighty percent), while C. noyvi, C. septicum, and C. histolyticum cause most of the other cases.","definition_xrefs":["MESH:D005738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"infection due to clostridium perfringens","termid":"MONDO:0023149"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gas gangrene","secondary_identifiers":["EFO:0007279","MEDGEN:8959","ICD10CM:A48.0","DOID:9159","icd11.foundation:1920227791","SCTID:80466000","UMLS:C0017105","ICD9:040.0"],"synonyms":[{"name":"gas bacillus infection","type":"exact"},{"name":"gas gangrene","type":"exact"},{"name":"myonecrosis","type":"exact"}],"termid":"MONDO:0005767","xrefs":{"Monarch":{"xref_id":"0005767"}}}


id: PBO:0068820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 58, pseudogene","termid":"PBO:0068820"}


id: SO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of replication that initiates early in S phase.","definition_xrefs":["PMID:23348837","PMID:9115207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early_origin_of_replication","synonyms":[{"name":"early origin","type":"exact"},{"name":"early origin of replication","type":"exact"},{"name":"early replication origin","type":"exact"}],"termid":"SO:0002140"}


id: PBO:0027197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules_following_nuclear_envelope_breakthrough","termid":"PBO:0027197"}


id: MONDO:0009839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PSP-parkinsonism (PSP-P) is an atypical variant of progressive supranuclear palsy (PSP), a rare late-onset neurodegenerative disease.","definition_xrefs":["Orphanet:240085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical progressive supranuclear palsy syndrome","termid":"MONDO:0020488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive supranuclear palsy-parkinsonism syndrome","secondary_identifiers":["GARD:17183","MEDGEN:342410","MESH:C537240","UMLS:C1850077","OMIM:260540"],"synonyms":[{"name":"PSP-p","type":"exact"},{"name":"PSP-parkinsonism","type":"exact"},{"name":"Parkinson-dementia syndrome","type":"related"},{"name":"Steele-Richardson-Olszewski syndrome, atypical","type":"related"},{"name":"atypical PSP","type":"related"},{"name":"progressive supranuclear palsy atypical","type":"related"},{"name":"supranuclear palsy, progressive atypical","type":"exact"},{"name":"supranuclear palsy, progressive, 1, atypical","type":"related"}],"termid":"MONDO:0009839","xrefs":{"Monarch":{"xref_id":"0009839"}}}


id: PBO:0029432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029432"}


id: PR:O74539
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.06","synonyms":[{"name":"Spom972h-mak3","type":"exact"},{"name":"his-Asp phosphorelay kinase phk2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74539"}


id: GO:0018569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydroquinone + O2 = cis,trans-4-hydroxymuconic semialdehyde.","definition_xrefs":["UM-BBD_reactionID:r0228"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroquinone 1,2-dioxygenase activity (obsolete GO:0018569)","termid":"GO:0018569"}


id: MONDO:0958265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic scleritis","secondary_identifiers":["MEDGEN:1853157","Orphanet:648675","UMLS:C5816747"],"termid":"MONDO:0958265","xrefs":{"Monarch":{"xref_id":"0958265"}}}


id: MONDO:0015200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with roundworms of the genus anisakis. Human infection results from the consumption of fish harboring roundworm larvae. The worms may cause acute nausea; vomiting; or penetrate into the wall of the digestive tract where they give rise to eosinophilic granuloma in the stomach; intestines; or the omentum.","definition_xrefs":["MESH:D017129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"},{"relation_name":"is_a","term_name":"intestinal helminthiasis","termid":"MONDO:0024271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anisakiasis","secondary_identifiers":["EFO:0007146","NCIT:C128393","Orphanet:1070","icd11.foundation:2005274000","MedDRA:10002533","ICD10CM:B81.0","MEDGEN:102418","SCTID:442652006","DOID:7033","UMLS:C0162576","GARD:693","ICD9:127.1"],"synonyms":[{"name":"Anisakiases","type":"related"},{"name":"Anisakis infection","type":"related"},{"name":"Anisakis simplex infection","type":"exact"},{"name":"Pseudoterranova infection","type":"related"},{"name":"infection by Anisakis larva","type":"exact"},{"name":"infections, Anisakis simplex","type":"related"}],"termid":"MONDO:0015200","xrefs":{"Monarch":{"xref_id":"0015200"}}}


id: RO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a 'neuron projection bundle' and a region in which one or more of its component neuron projections either synapses to targets or receives synaptic input.\\nT innervates some R\\nExpands_to: T has_fasciculating_neuron_projection that synapse_in some R.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innervates","termid":"RO:0002134"}


id: GO:0043393
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95050,104948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein binding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043393","terms_by_termid":{"GO:1904530":null}}


id: GO:0070634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ammonium ions from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transepithelial transport","termid":"GO:0070633"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"transepithelial ammonium transport","termid":"GO:0070634"}


id: PR:Q9HDW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma5 gene.","definition_xrefs":["UniProtKB:Q9HDW6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.05","synonyms":[{"name":"Spom972h-vma5","type":"exact"},{"name":"V-ATPase subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW6"}


id: PATO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having extra or fewer parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"has number of","termid":"PATO:0001555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered number of","termid":"PATO:0002083"}


id: GO:0150163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a microRNA (miRNA) that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:aruk","PMID:20737563","PMID:27145859"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated activation of transcription by RNA polymerase II (obsolete GO:0150163)","termid":"GO:0150163"}


id: PATO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000674 absolute temperature value (obsolete PATO:0000674)","termid":"PATO:0000674"}


id: GO:1903716
data:
  {"annotated_genes":["SJAG_03777","SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[114958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"}]},"cv_name":"biological_process","definition":"The process in which guanine is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:14998997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine transport","termid":"GO:0015854"},{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transport","termid":"GO:1904823"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"guanine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903716","terms_by_termid":{"GO:0098710":null,"GO:0140140":null}}


id: GO:0015641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein toxin (obsolete GO:0015641)","synonyms":[{"name":"lipoprotein toxin","type":"exact"}],"termid":"GO:0015641"}


id: MONDO:0024614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term used for any state of depression that is not psychotic.","definition_xrefs":["NCIT:C35369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotic depression","secondary_identifiers":["MEDGEN:76370","UMLS:C0282126"],"synonyms":[{"name":"neurotic depression","type":"exact"}],"termid":"MONDO:0024614","xrefs":{"Monarch":{"xref_id":"0024614"}}}


id: GO:1904066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in dauer larval development.","definition_xrefs":["PMID:22665789","GO_REF:0000060","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in dauer larval development","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signaling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signalling pathway involved in dauer larval development","type":"exact"}],"termid":"GO:1904066"}


id: PBO:0109294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in head and neck cancer 2","termid":"PBO:0109294"}


id: MONDO:0015814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary lymphoma of the skin composed of various numbers of small and large irregular neoplastic follicle center cells. Its morphologic pattern can be nodular, diffuse, or nodular and diffuse. It presents with solitary or grouped plaques and tumors, and it usually involves the scalp, forehead, or trunk. It rarely involves the legs. This type of cutaneous lymphoma tends to remain localized to the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous B-cell lymphoma","termid":"MONDO:0015819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"primary cutaneous follicle center lymphoma","secondary_identifiers":["SCTID:404143002","UMLS:C1333171","ICDO:9597/3","ONCOTREE:PCFCL","Orphanet:178540","MEDGEN:234180","NCIT:C7217","GARD:13701","icd11.foundation:77501812"],"synonyms":[{"name":"Crosti's disease","type":"exact"},{"name":"PCFCL","type":"exact"},{"name":"Reticulohistiocytoma of the dorsum","type":"exact"},{"name":"cutaneous follicle center lymphoma","type":"exact"},{"name":"cutaneous follicle centre lymphoma","type":"exact"}],"termid":"MONDO:0015814","xrefs":{"Monarch":{"xref_id":"0015814"}}}


id: MONDO:0010428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of methylmalonic acidemia with homocystinuria (see this term), an inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures.","definition_xrefs":["Orphanet:217377"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome X","termid":"MONDO:0017009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome Xp11.23-p11.22 duplication syndrome","secondary_identifiers":["SCTID:721881008","OMIM:300801","DOID:0060461","MEDGEN:440690","DECIPHER:89","UMLS:C2749022","GARD:12766","MESH:C567585"],"synonyms":[{"name":"Xp11.22-p11.23 Microduplication","type":"exact"},{"name":"chromosome Xp11.23-p11.22 duplication syndrome","type":"exact"},{"name":"chromosome xp11.23-p11.22 duplication syndrome, X-linked dominant","type":"exact"},{"name":"microduplication Xp11.22-p11.23 syndrome","type":"exact"},{"name":"trisomy Xp11.22-p11.23","type":"exact"}],"termid":"MONDO:0010428","xrefs":{"Monarch":{"xref_id":"0010428"}}}


id: PBO:0060628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 antisense RNA 2","termid":"PBO:0060628"}


id: MONDO:0031230
data:
  {"annotated_genes":["SJAG_02398","SJAG_00260","SJAG_07005","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030935"},{"annotations":[85342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030937"},{"annotations":[85314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030974"},{"annotations":[85956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100294"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex II deficiency, nuclear type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:252011"],"termid":"MONDO:0031230","terms_by_termid":{"MONDO:0030935":null,"MONDO:0030937":null,"MONDO:0030974":null,"MONDO:0100294":null},"xrefs":{"Monarch":{"xref_id":"0031230"}}}


id: GO:1902863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryonic camera-type eye development.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:16872597","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"embryonic camera-type eye development","termid":"GO:0031076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic camera-type eye development","synonyms":[{"name":"regulation of embryonic eye development","type":"exact"}],"termid":"GO:1902863"}


id: MONDO:0012162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any patterned macular dystrophy in which the cause of the disease is a mutation in the CTNNA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned macular dystrophy","termid":"MONDO:0020381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"patterned macular dystrophy 2","secondary_identifiers":["GARD:18238","DOID:0060864","MEDGEN:332348","OMIM:608970","UMLS:C1837029"],"synonyms":[{"name":"CTNNA1 patterned macular dystrophy","type":"exact"},{"name":"MDPT2","type":"exact"},{"name":"butterfly-shaped pigmentary maculary dystrophy 2","type":"exact"},{"name":"macular dystrophy, butterfly-Shaped pigmentary, 2","type":"related"},{"name":"macular dystrophy, patterned, 2","type":"related"},{"name":"macular dystrophy, patterned, type 2","type":"exact"},{"name":"patterned macular dystrophy caused by mutation in CTNNA1","type":"exact"},{"name":"patterned macular dystrophy type 2","type":"exact"}],"termid":"MONDO:0012162","xrefs":{"Monarch":{"xref_id":"0012162"}}}


id: GO:0035435
data:
  {"annotated_genes":["SJAG_01059","SJAG_01033","SJAG_00233","SJAG_04990","SJAG_00547","SJAG_04241"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109501,112527,116315],"is_not":false,"summary":null,"term":"GO:0035435"},{"annotations":[67449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[115599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[99182],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"The process in which a phosphate is transported across a membrane.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion transport","termid":"GO:0006817"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"phosphate ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphate ion membrane transport","type":"exact"}],"termid":"GO:0035435","terms_by_termid":{"GO:0035435":null,"GO:0180029":null,"GO:1990547":null,"GO:2000185":null}}


id: PBO:0087423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit a of the F0 sector of mitochondrial F1F0 ATP synthase; mitochondrially encoded; translation is specifically activated by Atp22p; ATP6 and ATP8 mRNAs are not translated in the absence of the F1 sector of ATPase; mutations in human ortholog MT-ATP6 are associated with neurodegenerative disorders such as Neurogenic Ataxia and Retinitis Pigmentosa (NARP), Leigh syndrome (LS), Charcot-Marie-Tooth (CMT), and ataxia telangiectasia","termid":"PBO:0087423"}


