# terms

id: PBO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis inducing protein Mei3","termid":"PBO:0003305"}


id: PBO:0085463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted tail-anchored plasma membrane protein; contains a conserved CYSTM module; related proteins in other organisms may be involved in response to stress; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0085463"}


id: GO:0015568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-idonate from one side of a membrane to the other. L-idonate is an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-idonate transmembrane transporter activity","synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"}],"termid":"GO:0015568"}


id: FYECO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium sulfite (Na2SO3) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na2SO3","synonyms":[{"name":"sodium sulfite added","type":"exact"}],"termid":"FYECO:0000231"}


id: MONDO:1012587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in American mink due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, American mink","secondary_identifiers":["OMIA:000202-452646"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Neovison vison (American mink)","type":"exact"}],"termid":"MONDO:1012587","xrefs":{"Monarch":{"xref_id":"1012587"}}}


id: GO:0035175
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116493],"is_not":false,"summary":null,"term":"GO:0035175"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 10) + ATP = histone H3-phosphoserine (position 10) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 10 of histone H3.","definition_xrefs":["GOC:bf","PMID:15041176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824","GO:0004672","GO:0140096"],"is_obsolete":false,"name":"histone H3S10 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044021"],"synonyms":[{"name":"histone kinase activity (H3-S10 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S10 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S10 specific)","type":"exact"}],"termid":"GO:0035175","terms_by_termid":{"GO:0035175":null}}


id: MONDO:0007334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant popliteal pterygium syndrome (AD-PPS) is a rare genetic malformative disorder characterized by cleft lip, with or without cleft palate, contractures of the lower extremities, abnormal external genitalia, syndactyly of fingers and/or toes, and a pyramidal skin fold over the hallux nail.","definition_xrefs":["Orphanet:1300"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"popliteal pterygium syndrome","termid":"MONDO:0017435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant popliteal pterygium syndrome","secondary_identifiers":["GARD:3242","icd11.foundation:2069589860","OMIM:119500","MEDGEN:1844082","SCTID:718222000","UMLS:C5848052"],"synonyms":[{"name":"PPS","type":"related"},{"name":"cleft Lip/palate, paramedian mucous cysts of the Lower Lip, popliteal pterygium, digital and genital anomalies","type":"related"},{"name":"cleft lip/palate paramedian mucous cysts of the lower lip popliteal pterygium digital and genital anomalies","type":"related"},{"name":"facio-genito-popliteal syndrome","type":"broad"},{"name":"faciogenitopopliteal syndrome","type":"related"},{"name":"popliteal pterygium syndrome","type":"related"},{"name":"popliteal pterygium syndrome 1","type":"exact"},{"name":"popliteal pterygium syndrome, autosomal dominant","type":"exact"},{"name":"popliteal web syndrome","type":"exact"}],"termid":"MONDO:0007334","xrefs":{"Monarch":{"xref_id":"0007334"}}}


id: PBO:0042930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin","termid":"PBO:0042930"}


id: PBO:0081082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC12 divergent transcript","termid":"PBO:0081082"}


id: GO:1990856
data:
  {"annotated_genes":["SJAG_00466","SJAG_03629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97005,105221],"is_not":false,"summary":null,"term":"GO:1990856"}]},"cv_name":"molecular_function","definition":"Binding to methionine-initiator methionine tRNA.","definition_xrefs":["GOC:hjd","ISBN:9781555810733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA binding","termid":"GO:0000049"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00466":null,"SJAG_03629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"methionyl-initiator methionine tRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990856","terms_by_termid":{"GO:1990856":null}}


id: PBO:0088025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2B component of U2 snRNP; involved in splicing, binds the U2 snRNA stem-loop IV in vitro but requires association of Lea1p for in vivo binding; does not contain the conserved C-terminal RNA binding domain found in other family members","termid":"PBO:0088025"}


id: PBO:0067921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 223","termid":"PBO:0067921"}


id: MONDO:0009832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial agenesis of the pancreas is characterized by the congenital absence of a critical mass of pancreatic tissue.","definition_xrefs":["Orphanet:2805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic agenesis","secondary_identifiers":["MESH:C564908","OMIMPS:260370","DOID:0050877","GARD:4203","UMLS:C5195568","SCTID:719044008","icd11.foundation:634711891","MEDGEN:1681783"],"synonyms":[{"name":"PAGEN1","type":"related"},{"name":"congenital pancreatic agenesis","type":"exact"},{"name":"pancreatic agenesis 1","type":"related"},{"name":"pancreatic agenesis type 1","type":"exact"},{"name":"partial agenesis of the pancreas","type":"exact"},{"name":"partial pancreatic agenesis","type":"exact"}],"termid":"MONDO:0009832","xrefs":{"Monarch":{"xref_id":"0009832"}}}


id: PBO:0049166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 8","termid":"PBO:0049166"}


id: MOD:01770
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-palmitoyl-L-threonine amide.","definition_xrefs":["RESID:AA0097#var","PubMed:8413602","RESID:AA0079#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"O-palmitoyl-L-threonine","termid":"MOD:00088"},{"relation_name":"has_functional_parent","term_name":"L-threonine amide","termid":"MOD:00106"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-palmitoyl-L-threonine amide","synonyms":[{"name":"(2S,3R)-2-amino-3-(hexadecanoyloxy)butanamide","type":"exact"},{"name":"OPamThrN","type":"exact"}],"termid":"MOD:01770"}


id: GO:0150087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single axon terminal bouton making contact onto two or more dendritic spines protruding from the same dendrite.","definition_xrefs":["PMID:10586883","PMID:11248111","PMID:22028887","PMID:24487234","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synapse bouton","termid":"GO:0150086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"multiple synapse bouton, contacting single dendrite","synonyms":[{"name":"MSB1","type":"exact"},{"name":"type 1 multi-synapse bouton","type":"exact"},{"name":"type 1 multi-synaptic bouton","type":"exact"},{"name":"type 1 multiple spine synapse bouton","type":"exact"},{"name":"type 1 multiple-synapse bouton","type":"exact"},{"name":"type 1 multisynapse bouton","type":"exact"},{"name":"type 1 multisynaptic bouton","type":"exact"}],"termid":"GO:0150087"}


id: SO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An instance of a self-interacting DNA region flanked by left and right TAD boundaries.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain","synonyms":[{"name":"TAD","type":"exact"},{"name":"topologically associated domain","type":"exact"}],"termid":"SO:0002304"}


id: GO:0072284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the metanephric S-shaped body is generated and organized. The metanephric S-shaped body is the successor of the metanephric comma-shaped body that contributes to the morphogenesis of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-shaped body morphogenesis","termid":"GO:0072050"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric S-shaped body morphogenesis","termid":"GO:0072284"}


id: GO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5A serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 5A serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 5A receptor binding","type":"exact"},{"name":"type 5A serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031830"}


id: PBO:0041169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 3 pseudogene 1","termid":"PBO:0041169"}


id: PR:Q09100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rnp24 gene.","definition_xrefs":["UniProtKB:Q09100","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein rnp24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.04","synonyms":[{"name":"Spom972h-rnp24","type":"exact"}],"termid":"PR:Q09100"}


id: PBO:0073805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 11","termid":"PBO:0073805"}


id: PBO:0070757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 13","termid":"PBO:0070757"}


id: PBO:0005065
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.9","termid":"PBO:0005065"}


id: PBO:0003462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing protein (predicted)","termid":"PBO:0003462"}


id: PBO:0085713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds1p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085713"}


id: MONDO:1012352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria pigmentosa, non-human animal","termid":"MONDO:1011748"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urticaria pigmentosa, domestic cat","secondary_identifiers":["OMIA:001289-9685"],"termid":"MONDO:1012352","xrefs":{"Monarch":{"xref_id":"1012352"}}}


id: GO:0019585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid metabolic process","termid":"GO:0006063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucuronate metabolic process","secondary_identifiers":["GO:0019699","Wikipedia:Glucuronic_acid"],"synonyms":[{"name":"glucuronate metabolism","type":"exact"}],"termid":"GO:0019585"}


id: PBO:0034516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long,_thick_stable_microtubule_bundle","termid":"PBO:0034516"}


id: PBO:0060886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEPRO antisense RNA 1","termid":"PBO:0060886"}


id: GO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coagulation, the process in which a fluid solution, or part of it, changes into a solid or semisolid mass.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coagulation","synonyms":[{"name":"regulation of clotting","type":"exact"}],"termid":"GO:0050818"}


id: PBO:0076138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLA2 pseudogene 3","termid":"PBO:0076138"}


id: PBO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trna Adenosine Deaminase","termid":"PBO:0001072"}


id: MONDO:0022071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carbon baby syndrome, also known as universal acquired melanosis, is a rare form of hyperpigmentation. The skin of affected infants progressively darkens over the first years of life in the absence of other symptoms. The cause of the condition is unknown.","definition_xrefs":["GARD:0001089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon baby syndrome","secondary_identifiers":["MEDGEN:98349","SCTID:238700008","UMLS:C0406419"],"synonyms":[{"name":"universal acquired melanosis","type":"related"}],"termid":"MONDO:0022071","xrefs":{"Monarch":{"xref_id":"0022071"}}}


id: MONDO:0010407
data:
  {"annotated_genes":["SJAG_02371"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84837],"is_not":false,"summary":null,"term":"MONDO:0010407"}]},"cv_name":"mondo","definition":"An X-linked syndromic intellectual disability characterized by moderate to severe intellectual deficit in boys and moderate intellectual deficit in girls. It has been described in 14 members from four generations of one family. Macrocephaly was reported and holoprosencephaly may also be present (two family members). The mode of transmission is X-linked semi-dominant.","definition_xrefs":["Orphanet:85328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02371":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked syndromic, Turner type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060829","Orphanet:3056","OMIM:300706","OMIM:309590","UMLS:C2678046","GARD:81","MESH:C567476","OMIM:300612","SCTID:725912001","DOID:0060811","MEDGEN:394425","MESH:C563154"],"synonyms":[{"name":"Brooks Wisniewski Brown syndrome","type":"exact"},{"name":"Brooks-Wisniewski-Brown Syndrome","type":"exact"},{"name":"Brooks-Wisniewski-Brown syndrome","type":"exact"},{"name":"Juberg-Marsidi Syndrome","type":"related"},{"name":"MRXST","type":"exact"},{"name":"X-linked intellectual disability, Brooks type","type":"exact"},{"name":"X-linked intellectual disability, Turner type","type":"exact"},{"name":"X-linked mental retardation Brooks type","type":"related"},{"name":"intellectual disability, X-linked syndromic, Turner type","type":"exact"},{"name":"mental retardation and macrocephaly syndrome","type":"exact"},{"name":"mental retardation, X-Linked, with growth retardation, deafness, and microgenitalism","type":"related"},{"name":"mental retardation, X-linked, syndromic, Brooks-Wisniewski-Brown Type","type":"related"},{"name":"mental retardation, X-linked, syndromic, Brooks-Wisniewski-Brown type","type":"related"},{"name":"mental retardation, X-linked, syndromic, Turner type","type":"exact"},{"name":"syndromic X-linked intellectual disability Turner type","type":"exact"}],"termid":"MONDO:0010407","terms_by_termid":{"MONDO:0010407":null},"xrefs":{"Monarch":{"xref_id":"0010407"}}}


id: GO:0097490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single sympathetic neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:BHF","PMID:22790009","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic neuron projection extension","synonyms":[{"name":"sympathetic neurite extension","type":"narrow"},{"name":"sympathetic neuron process extension","type":"exact"},{"name":"sympathetic neuron protrusion extension","type":"exact"},{"name":"sympathetic neuronal cell projection extension","type":"exact"}],"termid":"GO:0097490"}


id: GO:0017060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-(1,3)-N-acetyl-D-glucosaminyl-R = GDP + beta-D-galactosyl-(1,3)-[alpha-L-fucosyl-(1,4)]-N-acetyl-D-glucosaminyl-R.","definition_xrefs":["EC:2.4.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5693925","RHEA:23628","Reactome:R-HSA-9603986","MetaCyc:2.4.1.65-RXN"],"synonyms":[{"name":"(Le(a))-dependent (alpha-3/4)-fucosyltransferase activity","type":"broad"},{"name":"(Lea)-dependent (alpha-3/4)-fucosyltransferase activity","type":"broad"},{"name":"3-alpha-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity","type":"related"},{"name":"FucT-II activity","type":"broad"},{"name":"GDP-L-fucose:3-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 4I-alpha-L-fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:3-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 4I-alpha-L-fucosyltransferase activity","type":"related"},{"name":"Lewis FT activity","type":"broad"},{"name":"Lewis alpha-(1,3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis alpha-(1->3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis blood group alpha-(1,3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis blood group alpha-(1->3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis(Le) blood group gene-dependent alpha-(1,3/4)-L-fucosyltransferase activity","type":"broad"},{"name":"Lewis(Le) blood group gene-dependent alpha-(1->3/4)-L-fucosyltransferase activity","type":"narrow"},{"name":"alpha(1,4)-L-fucosyltransferase activity","type":"broad"},{"name":"alpha-(1,3/1,4) fucosyltransferase III activity","type":"broad"},{"name":"alpha-(1,4)-L-fucosyltransferase activity","type":"broad"},{"name":"alpha-(1->4)-L-fucosyltransferase activity","type":"broad"},{"name":"alpha-4-L-fucosyltransferase activity","type":"broad"},{"name":"beta-acetylglucosaminylsaccharide fucosyltransferase activity","type":"broad"},{"name":"blood group Lewis alpha-4-fucosyltransferase activity","type":"broad"},{"name":"blood-group substance Le(a)-dependent fucosyltransferase activity","type":"broad"},{"name":"blood-group substance Lea-dependent fucosyltransferase","type":"broad"},{"name":"fuca(1,3)-glycosidic linkage formation","type":"related"},{"name":"galactoside 3(4)-L-fucosyltransferase activity","type":"broad"},{"name":"guanosine diphosphofucose-beta-acetylglucosaminylsaccharide 4-alpha-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glycoprotein 4-alpha-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glycoprotein 4-alpha-fucosyltransferase activity","type":"related"}],"termid":"GO:0017060"}


id: PBO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 2","termid":"PBO:0045714"}


id: PBO:0069531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 800, pseudogene","termid":"PBO:0069531"}


id: MONDO:0800407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked retinopathy caused by variants in the NYX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"NYX-related retinopathy","termid":"MONDO:0800407","xrefs":{"Monarch":{"xref_id":"0800407"}}}


id: PBO:0051915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 binding protein 2","termid":"PBO:0051915"}


id: PBO:0070080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 37, pseudogene","termid":"PBO:0070080"}


id: MONDO:0007112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interventricular septum aneurysm is a rare, non-syndromic, congenital heart malformation characterized by the presence of a congenital aneurysm of the membranous portion of the interventricular septum. Patients may be asymptomatic or may present with ventricular or supraventricular tachycardia, fatigue, exertional dyspnea, palpitations, and cardiac murmur. Ventricular septal defects and conduction defects, such as first-degree atrio-ventricular block or incomplete right bundle branch block, may also be also associated.","definition_xrefs":["Orphanet:99092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interventricular septum aneurysm","secondary_identifiers":["OMIM:105805","GARD:16895","UMLS:C1387721","MEDGEN:234648","MESH:C563239"],"synonyms":[{"name":"aneurysm of interventricular septum","type":"related"}],"termid":"MONDO:0007112","xrefs":{"Monarch":{"xref_id":"0007112"}}}


id: PATO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tendency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"},{"relation_name":"is_a","term_name":"tendency","termid":"PATO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased tendency","termid":"PATO:0002361"}


id: FYPO:0004386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which single-stranded DNA binding by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished DNA binding","termid":"FYPO:0000659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"abolished single-stranded DNA binding","synonyms":[{"name":"abolished ssDNA binding","type":"exact"},{"name":"single-stranded DNA binding abolished","type":"exact"}],"termid":"FYPO:0004386"}


id: PBO:0088650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, guanine nucleotide Ggc1","termid":"PBO:0088650"}


id: GO:0015125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bile acid from one side of a membrane to the other. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"bile acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-194083","Reactome:R-HSA-5661198","Reactome:R-HSA-194079","Reactome:R-HSA-5661184","Reactome:R-HSA-194130","Reactome:R-HSA-9733964"],"termid":"GO:0015125"}


id: PBO:0031174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_small_cell","termid":"PBO:0031174"}


id: GO:0030493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a bacteriochlorophyll, any of the chlorophylls of photosynthetic bacteria. They differ structurally from the chlorophylls of higher plants.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"bacteriochlorophyll metabolic process","synonyms":[{"name":"bacteriochlorophyll metabolism","type":"exact"}],"termid":"GO:0030493"}


id: PBO:0042750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein V","termid":"PBO:0042750"}


id: GO:1901865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of capsorubin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"capsorubin metabolic process","termid":"GO:1901864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"capsorubin catabolic process","synonyms":[{"name":"capsorubin breakdown","type":"exact"},{"name":"capsorubin catabolism","type":"exact"},{"name":"capsorubin degradation","type":"exact"}],"termid":"GO:1901865"}


id: FYPO:0006028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:11694585"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to actin cortical patch","termid":"FYPO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to actin cortical patch, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin patch, with protein mislocalized to cytoplasm","type":"exact"},{"name":"reduced protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0006028"}


id: GO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4'-(2-hydroxyisopropyl)phenylurea + H2O = 4'-(2-hydroxyisopropyl)phenylaniline + carbamic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4'-(2-hydroxyisopropyl)phenylurea amidohydrolase activity (obsolete GO:0034571)","termid":"GO:0034571"}


id: PBO:0081528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 438","termid":"PBO:0081528"}


id: PBO:0080251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 14 pseudogene","termid":"PBO:0080251"}


id: PBO:0048665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G kinase anchoring protein 1","termid":"PBO:0048665"}


id: PBO:0091819
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.3040332_3040333insG","termid":"PBO:0091819"}


id: GO:0102823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + kaempferol-3-rhamnoside = kaempferol 3-O-rhamnoside-7-O-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol-3-rhamnoside-glucosyltransferase activity (obsolete GO:0102823)","termid":"GO:0102823"}


id: PBO:0076501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 1","termid":"PBO:0076501"}


id: GO:0061825
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The F-actin-rich core of an adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell.","definition_xrefs":["PMID:23158496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"podosome","termid":"GO:0002102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"podosome core","termid":"GO:0061825"}


id: GO:0090359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid biosynthetic process","termid":"GO:0010115"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"abscisic acid biosynthetic process","termid":"GO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of abscisic acid biosynthetic process","synonyms":[{"name":"negative regulation of abscisic acid biosynthesis","type":"exact"}],"termid":"GO:0090359"}


id: MONDO:0014385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the SLC24A4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A5","secondary_identifiers":["MEDGEN:863015","DOID:0110063","OMIM:615887","GARD:16028","UMLS:C4014578"],"synonyms":[{"name":"AI2A5","type":"exact"},{"name":"SLC24A4 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in SLC24A4","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA5","type":"exact"},{"name":"amelogenesis imperfecta type IIA5","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA5","type":"related"},{"name":"amelogenesis imperfecta, type IIA5","type":"exact"}],"termid":"MONDO:0014385","xrefs":{"Monarch":{"xref_id":"0014385"}}}


id: PBO:0064715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 51","termid":"PBO:0064715"}


id: MONDO:0100007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic inflammatory demyelinating polyneuropathy (obsolete MONDO:0100007)","termid":"MONDO:0100007","xrefs":{"Monarch":{"xref_id":"0100007"}}}


id: GO:0102552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + a [glycine-cleavage complex H protein] N6-octanoyl-L-lysine + 2 a sulfurated [sulfur carrier] = 2 L-methionine + 2 5'-deoxyadenosine + a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine + 2 an unsulfurated [sulfur carrier].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoyl synthase activity (acting on glycine-cleavage complex H protein (obsolete GO:0102552)","termid":"GO:0102552"}


id: PBO:0052332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1755","termid":"PBO:0052332"}


id: PBO:0072646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor 2","termid":"PBO:0072646"}


id: FYPO:0001334
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[118968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[118925,119335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the regulation of a molecular function, biological process, or biological quality in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01330":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":3,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"regulation phenotype during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:28954740":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_04284","SJAG_01330"],"single_locus_genotype_uniquenames":["nup61delta","mad2delta"],"synonyms":[{"name":"fission yeast regulation phenotype during vegetative growth","type":"exact"},{"name":"regulation phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001334","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000619":null,"FYPO:0004318":null,"FYPO_EXT:0000001":null}}


id: GO:0045274
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of the respiratory chain located in the plasma membrane, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain. Examples of this component are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex II (obsolete GO:0045274)","synonyms":[{"name":"respiratory chain complex II","type":"broad"}],"termid":"GO:0045274"}


id: PBO:0075011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-22","termid":"PBO:0075011"}


id: GO:0060874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progession of the posterior semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior semicircular canal development","termid":"GO:0060874"}


id: PBO:0071095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 97","termid":"PBO:0071095"}


id: PBO:0080894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F3","termid":"PBO:0080894"}


id: PBO:0058121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4423","termid":"PBO:0058121"}


id: GO:0043728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-keto-4-methylthiobutyrate + L-glutamine = 2-oxoglutaramate + L-methionine.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-keto-4-methylthiobutyrate aminotransferase activity (obsolete GO:0043728)","termid":"GO:0043728"}


id: GO:0089713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heteromeric complex consisting of Cbf1 and basic leucine zipper (bZIP) containing transcriptional activators, Met4 and Met28, that forms over the sequence TCACGTG in the upstream activating sequence (UAS) of genes involved in sulfur amino acid metabolism, resulting in their transcriptional activation.","definition_xrefs":["PMID:9171357","PMID:8665859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cbf1-Met4-Met28 complex","termid":"GO:0089713"}


id: PBO:0060400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 3","termid":"PBO:0060400"}


id: GO:2000546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904849"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000544"},{"relation_name":"is_a","term_name":"positive regulation of endothelial cell chemotaxis","termid":"GO:2001028"},{"relation_name":"positively_regulates","term_name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000546"}


id: PATO:0000519
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000519 humidity sensitivity value (obsolete PATO:0000519)","termid":"PATO:0000519"}


id: GO:0009867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid.","definition_xrefs":["GOC:jy","PMID:20159850","PMID:16478936","PMID:19522558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to jasmonic acid stimulus","termid":"GO:0071395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"jasmonic acid mediated signaling pathway","synonyms":[{"name":"JA signaling","type":"exact"},{"name":"jasmonate signaling","type":"related"},{"name":"jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009867"}


id: FYPO:0000747
data:
  {"alleles_by_uniquename":{"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118970,118971,118972,119377],"is_not":false,"summary":null,"term":"FYPO:0000747"}]},"cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize adenine, and therefore requires adenine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":3,"genotypes_by_uniquename":{"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domE(S427>stop)","display_uniquename":"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-1","expression":"Not assayed or wild type"}]}]},"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domK(Q262A aa)","display_uniquename":"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-2","expression":"Not assayed or wild type"}]}]},"ade6delta":{"display_name":"ade6delta","display_uniquename":"ade6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-3","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for adenine","references_by_uniquename":{"PMID:19330769":null,"PMID:21905090":null},"single_locus_annotated_genes":["SJAG_01081"],"single_locus_genotype_uniquenames":["ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","ade6delta","ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"adenine auxotrophy","type":"exact"},{"name":"growth auxotrophic for adenine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for adenine during vegetative growth","type":"exact"}],"termid":"FYPO:0000747","terms_by_termid":{"FYPO:0000747":null}}


id: MONDO:0006388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hormonally functioning or non-functioning pituitary gland adenocarcinoma that produces prolactin.","definition_xrefs":["NCIT:C5962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolactin producing pituitary tumor","termid":"MONDO:0003430"},{"relation_name":"is_a","term_name":"pituitary adenocarcinoma","termid":"MONDO:0017582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prolactin-producing pituitary gland carcinoma","secondary_identifiers":["MEDGEN:277338","EFO:1000497","UMLS:C1334614"],"synonyms":[{"name":"PRL producing pituitary gland carcinoma","type":"exact"},{"name":"malignant pituitary gland prolactinoma","type":"exact"},{"name":"malignant pituitary prolactinoma","type":"exact"},{"name":"malignant prolactin producing neoplasm of pituitary","type":"exact"},{"name":"malignant prolactin producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant prolactin producing neoplasm of the pituitary","type":"exact"},{"name":"malignant prolactin producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant prolactin producing pituitary gland neoplasm","type":"exact"},{"name":"malignant prolactin producing pituitary gland tumor","type":"exact"},{"name":"malignant prolactin producing pituitary gland tumour","type":"exact"},{"name":"malignant prolactin producing pituitary neoplasm","type":"exact"},{"name":"malignant prolactin producing pituitary tumor","type":"exact"},{"name":"malignant prolactin producing pituitary tumour","type":"exact"},{"name":"malignant prolactin producing tumor","type":"exact"},{"name":"malignant prolactin producing tumor of pituitary","type":"exact"},{"name":"malignant prolactin producing tumor of pituitary gland","type":"exact"},{"name":"malignant prolactin producing tumor of the pituitary","type":"exact"},{"name":"malignant prolactin producing tumor of the pituitary gland","type":"exact"},{"name":"malignant prolactin producing tumour","type":"exact"},{"name":"malignant prolactin producing tumour of pituitary","type":"exact"},{"name":"malignant prolactin producing tumour of pituitary gland","type":"exact"},{"name":"malignant prolactin producing tumour of the pituitary","type":"exact"},{"name":"malignant prolactin producing tumour of the pituitary gland","type":"exact"},{"name":"malignant prolactin secreting neoplasm of pituitary","type":"exact"},{"name":"malignant prolactin secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant prolactin secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant prolactin secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant prolactin secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant prolactin secreting pituitary gland tumor","type":"exact"},{"name":"malignant prolactin secreting pituitary gland tumour","type":"exact"},{"name":"malignant prolactin secreting pituitary neoplasm","type":"exact"},{"name":"malignant prolactin secreting pituitary tumor","type":"exact"},{"name":"malignant prolactin secreting pituitary tumour","type":"exact"},{"name":"malignant prolactin secreting tumor of pituitary","type":"exact"},{"name":"malignant prolactin secreting tumor of pituitary gland","type":"exact"},{"name":"malignant prolactin secreting tumor of the pituitary","type":"exact"},{"name":"malignant prolactin secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant prolactin secreting tumour of pituitary","type":"exact"},{"name":"malignant prolactin secreting tumour of pituitary gland","type":"exact"},{"name":"malignant prolactin secreting tumour of the pituitary","type":"exact"},{"name":"malignant prolactin secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant prolactinoma","type":"exact"},{"name":"malignant prolactinoma of pituitary","type":"exact"},{"name":"malignant prolactinoma of pituitary gland","type":"exact"},{"name":"malignant prolactinoma of the pituitary","type":"exact"},{"name":"malignant prolactinoma of the pituitary gland","type":"exact"},{"name":"prolactin producing pituitary gland carcinoma","type":"exact"},{"name":"prolactin-producing pituitary gland carcinoma","type":"exact"}],"termid":"MONDO:0006388","xrefs":{"Monarch":{"xref_id":"0006388"}}}


id: PBO:0044269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 9","termid":"PBO:0044269"}


id: PBO:0058442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5007","termid":"PBO:0058442"}


id: PR:O74891
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ret3 gene.","definition_xrefs":["UniProtKB:O74891","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit zeta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.07","synonyms":[{"name":"Spom972h-ret3","type":"exact"},{"name":"zeta-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"zeta-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74891"}


id: PBO:0081701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF622 pseudogene 1","termid":"PBO:0081701"}


id: PATO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of physical entities inhering in a bearer by virtue of the bearer's lacking a physical part as specified by the additional entity.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacks parts or has fewer parts of type","termid":"PATO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks all parts of type","secondary_identifiers":["PATO:0001557","OBO_REL:lacks_part"],"synonyms":[{"name":"lacks all physical parts of type","type":"exact"}],"termid":"PATO:0002000"}


id: PBO:0083545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps two other dubious ORFs: YPR170C and YPR170W-B","termid":"PBO:0083545"}


id: PBO:0027659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_cellular_response_to_hydroxyurea","termid":"PBO:0027659"}


id: FYPO:0006447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cleavage furrow during vegetative growth","synonyms":[{"name":"abolished protein localization to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"protein absent from cleavage furrow during vegetative growth","type":"related"},{"name":"protein localization to cleavage furrow abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006447"}


id: PBO:0109384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 15","termid":"PBO:0109384"}


id: PBO:0058297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4671","termid":"PBO:0058297"}


id: FYPO:0004562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"binucleate aseptate vegetative cell","synonyms":[{"name":"binucleate aseptate cell during mitotic cell cycle","type":"related"},{"name":"binucleate aseptate cell during vegetative growth","type":"exact"},{"name":"dikaryosis","type":"related"}],"termid":"FYPO:0004562"}


id: PATO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer being shaped like a scute or an osteoderm.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scute-like","termid":"PATO:0002520"}


id: PBO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk1 (predicted)","termid":"PBO:0001233"}


id: PBO:0072841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 pseudogene 1","termid":"PBO:0072841"}


id: PBO:0111741
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family","termid":"PBO:0111741"}


id: PR:Q9UTA7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C25B8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.11","synonyms":[{"name":"Spom972h-SPAC25B8.11","type":"exact"}],"termid":"PR:Q9UTA7"}


id: PBO:0067743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 42","termid":"PBO:0067743"}


id: GO:0004972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A cation channel that opens in response to binding by extracellular glutmate, but only if glycine or D-serine is also bound and the membrane is depolarized. Voltage gating is indirect, due to ejection of bound magnesium from the pore at permissive voltages.","definition_xrefs":["GOC:mah","PMID:10049997","PMID:7790891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"NMDA glutamate receptor activity","secondary_identifiers":["Wikipedia:NMDA_receptor"],"synonyms":[{"name":"N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"NMDA receptor","type":"exact"}],"termid":"GO:0004972"}


id: PBO:0039925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF26 antisense RNA 1","termid":"PBO:0039925"}


id: GO:0048109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link through a process of forming first an intermediate cysteine sulfenic acid by peroxide oxidation, followed by condensation with the alpha-amido of the following serine residue and the release of water.","definition_xrefs":["PMID:12802338","GOC:jid","PMID:12802339","RESID:AA0344"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-amino-3-isothiazolidinone-L-serine (obsolete GO:0048109)","termid":"GO:0048109"}


id: MONDO:0035471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder with multisystemic involvement and primary lymphedema (obsolete MONDO:0035471)","secondary_identifiers":["Orphanet:568047"],"termid":"MONDO:0035471","xrefs":{"Monarch":{"xref_id":"0035471"}}}


id: MONDO:0006998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the tonsil.","definition_xrefs":["NCIT:C7404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waldeyer's ring cancer","termid":"MONDO:0004685"},{"relation_name":"is_a","term_name":"tonsil neoplasm","termid":"MONDO:0021250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"tonsil cancer","secondary_identifiers":["MedDRA:10044002","MEDGEN:148341","ICD10CM:C09","SCTID:363393007","ICD9:146.0","EFO:1001214","UMLS:C0751560","DOID:8858","MESH:D014067"],"synonyms":[{"name":"cancer of tonsil","type":"broad"},{"name":"malignant neoplasm of faucial tonsil","type":"exact"},{"name":"malignant neoplasm of palatine tonsil","type":"exact"},{"name":"malignant neoplasm of the tonsil","type":"exact"},{"name":"malignant neoplasm of tonsil","type":"exact"},{"name":"malignant neoplasm of tonsil, faucial","type":"exact"},{"name":"malignant tonsil neoplasm","type":"exact"},{"name":"malignant tonsil tumor","type":"exact"},{"name":"malignant tonsil tumour","type":"exact"},{"name":"malignant tonsillar neoplasm","type":"exact"},{"name":"malignant tonsillar tumor","type":"exact"},{"name":"malignant tonsillar tumour","type":"exact"},{"name":"malignant tumor of the tonsil","type":"exact"},{"name":"malignant tumor of tonsil","type":"exact"},{"name":"malignant tumour of the tonsil","type":"exact"},{"name":"malignant tumour of tonsil","type":"exact"},{"name":"tonsil cancer","type":"exact"}],"termid":"MONDO:0006998","xrefs":{"Monarch":{"xref_id":"0006998"}}}


id: PBO:0089198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein phosphatase Azr1","termid":"PBO:0089198"}


id: MONDO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of cerebral palsy characterized by both the tight muscle tone of spastic cerebral palsy and the writhing, involuntary muscle movements of athetoid cerebral palsy.","definition_xrefs":["NCIT:C97177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral palsy","termid":"MONDO:0006497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed cerebral palsy","secondary_identifiers":["MEDGEN:148218","SCTID:702318008","ICD9:343.8","DOID:0050673","UMLS:C0751024"],"termid":"MONDO:0000400","xrefs":{"Monarch":{"xref_id":"0000400"}}}


id: GO:0047534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetolactate = 3-hydroxy-3-methyl-2-oxobutanoate.","definition_xrefs":["EC:5.4.99.3","MetaCyc:2-ACETOLACTATE-MUTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"2-acetolactate mutase activity","secondary_identifiers":["RHEA:16361"],"synonyms":[{"name":"2-acetolactate methylmutase activity","type":"related"},{"name":"acetohydroxy acid isomerase activity","type":"broad"},{"name":"acetolactate mutase activity","type":"related"}],"termid":"GO:0047534"}


id: MONDO:0014692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the BBS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"retinal ciliopathy","termid":"MONDO:0022410"},{"relation_name":"is_a","term_name":"BBS2-related ciliopathy","termid":"MONDO:1040048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 74","secondary_identifiers":["UMLS:C4225281","DOID:0110401","OMIM:616562","ICD10CM:H35.5","GARD:16138","MEDGEN:906896"],"synonyms":[{"name":"BBS2 retinitis pigmentosa","type":"exact"},{"name":"RP74","type":"exact"},{"name":"retinitis pigmentosa 74","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in BBS2","type":"exact"},{"name":"retinitis pigmentosa type 74","type":"exact"}],"termid":"MONDO:0014692","xrefs":{"Monarch":{"xref_id":"0014692"}}}


id: MONDO:0004541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of testicular seminoma characterized by the presence of seminoma cells arranged in pseudoglandular patterns and few lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pseudoglandular variant testicular seminoma","secondary_identifiers":["MEDGEN:273633","NCIT:C40958","UMLS:C1515293","DOID:8358"],"synonyms":[{"name":"testicular seminoma, pseudoglandular variant","type":"exact"}],"termid":"MONDO:0004541","xrefs":{"Monarch":{"xref_id":"0004541"}}}


id: PBO:0042525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2 pseudogene 3","termid":"PBO:0042525"}


id: PBO:0057782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2909","termid":"PBO:0057782"}


id: MONDO:0011868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal congenital contracture syndrome type 2 is a rare arthrogryposis syndrome characterized by multiple congenital contactures (typically extended elbows and flexed knees), micrognathia, anterior horn cell degeneration, skeletal muscle atrophy (mainly in the lower limbs), presence of a markedly distended urinary bladder and absence of hydrops, pterygia and bone fractures. Other craniofacial (e.g. cleft palate, facial palsy) and ocular (e.g. anisocoria, retinal detachment) anomalies may be additionally observed. The disease is usually neonatally lethal however, survival into adolescence has been reported.","definition_xrefs":["Orphanet:137776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 2","secondary_identifiers":["DOID:0060560","GARD:9177","MEDGEN:334413","SCTID:715419004","OMIM:607598","UMLS:C1843478","MESH:C564369"],"synonyms":[{"name":"ERBB3 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS2","type":"exact"},{"name":"lethal congenital contractural syndrome 2","type":"exact"},{"name":"lethal congenital contracture syndrome 2","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ERBB3","type":"exact"},{"name":"lethal congenital contracture syndrome type 2","type":"exact"},{"name":"multiple contracture syndrome, Israeli Bedouin type","type":"related"},{"name":"multiple contracture syndrome, Israeli Bedouin type a","type":"related"},{"name":"multiple contracture syndrome, Israeli-Bedouin type","type":"exact"}],"termid":"MONDO:0011868","xrefs":{"Monarch":{"xref_id":"0011868"}}}


id: PBO:0028953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_stationary_phase","termid":"PBO:0028953"}


id: PBO:0056638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED14 opposite strand","termid":"PBO:0056638"}


id: GO:0110114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph","PMID:27365390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of lipid transporter activity","termid":"GO:0110114"}


id: GO:1990633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of punctate focus localized to the perinuclear region of germline cytoplasm in C. elegans. Mutator foci are required for RNA interference (RNAi) and serve as sites of small inhibitory RNA (siRNA) amplification. As such, proteins that localize to mutator foci include RNA-directed RNA polymerases (RdRPs) and beta-nucleotidyltransferases. Mutator foci are distinct from, but adjacent to or partially overlap, P granules.","definition_xrefs":["GOC:kmv","PMID:25635455","PMID:22713602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mutator focus","termid":"GO:1990633"}


id: GO:0006942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"regulates","term_name":"striated muscle contraction","termid":"GO:0006941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle contraction","termid":"GO:0006942"}


id: MONDO:0023258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease due to glucose-6-phosphatase deficiency in which the cause of the disease is a mutation in the SLC37A4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease I","termid":"MONDO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease type 1 due to SLC37A4 mutation","secondary_identifiers":["NANDO:1200841","UMLS:C2931345","MEDGEN:419390","MESH:C536831","GARD:2501","HGNC:4061"],"synonyms":[{"name":"G6P translocase deficiency","type":"broad"},{"name":"SLC37A4 glycogen storage disease I","type":"exact"},{"name":"glucose-6-phosphate translocase deficiency","type":"exact"},{"name":"glycogen storage disease I caused by mutation in SLC37A4","type":"exact"}],"termid":"MONDO:0023258","xrefs":{"Monarch":{"xref_id":"0023258"}}}


id: PR:Q9UTI5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01555","PANTHER:PTHR11124:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.06","secondary_identifiers":["UniProtKB:Q9UTI5"],"synonyms":[{"name":"Spom972h-VPS29","type":"exact"}],"termid":"PR:Q9UTI5"}


id: PBO:0064964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 17","termid":"PBO:0064964"}


id: GO:1905208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiocyte differentiation.","definition_xrefs":["GO_REF:0000058","PMID:23069713","GOC:bc","GOC:TermGenie","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"negatively_regulates","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiocyte differentiation","synonyms":[{"name":"down regulation of cardiac cell differentiation","type":"exact"},{"name":"down regulation of cardiocyte differentiation","type":"exact"},{"name":"down regulation of heart cell differentiation","type":"exact"},{"name":"down-regulation of cardiac cell differentiation","type":"exact"},{"name":"down-regulation of cardiocyte differentiation","type":"exact"},{"name":"down-regulation of heart cell differentiation","type":"exact"},{"name":"downregulation of cardiac cell differentiation","type":"exact"},{"name":"downregulation of cardiocyte differentiation","type":"exact"},{"name":"downregulation of heart cell differentiation","type":"exact"},{"name":"inhibition of cardiac cell differentiation","type":"narrow"},{"name":"inhibition of cardiocyte differentiation","type":"narrow"},{"name":"inhibition of heart cell differentiation","type":"narrow"},{"name":"negative regulation of cardiac cell differentiation","type":"exact"},{"name":"negative regulation of heart cell differentiation","type":"exact"}],"termid":"GO:1905208"}


id: PBO:0072147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 24","termid":"PBO:0072147"}


id: PBO:0048749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1 pseudogene 2","termid":"PBO:0048749"}


id: PBO:0076412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 6 like","termid":"PBO:0076412"}


id: PBO:0110462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACO2 pseudogene 1","termid":"PBO:0110462"}


id: PR:Q9USK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C4B3.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.13","synonyms":[{"name":"Spom972h-SPCC4B3.13","type":"exact"}],"termid":"PR:Q9USK3"}


id: GO:2000617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 acetylation (obsolete GO:2000617)","synonyms":[{"name":"positive regulation of histone H3 acetylation at K9","type":"exact"},{"name":"positive regulation of histone H3K9 acetylation","type":"exact"}],"termid":"GO:2000617"}


id: PBO:0087678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; termed subunit I or subunit j; does not correspond to known ATP synthase subunits in other organisms","termid":"PBO:0087678"}


id: GO:0062208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a pattern recognition receptor signaling pathway.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"positively_regulates","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"}


id: PBO:0004694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane exchange factor subunit Sat1 (predicted)","termid":"PBO:0004694"}


id: GO:0160115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The 3 protofilaments A11, A12, and A13 of the A tubule along with associated inner sheath microtuble inner proteins (MIPs), either in the lumen of the A tubule or of the B tubule, which stabilize these three filiments within the axonemal doublet microtubule. The ribbon protofilaments separate the lumens of the A and B tubules.","definition_xrefs":["PMID:1262413","PMID:29430673","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal microtubule doublet ribbon","termid":"GO:0160115"}


id: PBO:0039183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 13","termid":"PBO:0039183"}


id: MONDO:0009235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial benign flecked retina is a rare retinal dystrophy characterized by diffuse bilateral white-yellow fleck-like lessions extending to the far periphery of the retina but sparing the foveal region, with asymptomatic clinical phenotype and absence of electrophysiologic deficits.","definition_xrefs":["Orphanet:363989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"familial benign flecked retina","secondary_identifiers":["OMIM:228980","UMLS:C1856718","MEDGEN:341605","ICD10CM:H35.5","GARD:18651","DOID:0111677","MESH:C565564"],"synonyms":[{"name":"FLECK retina, familial benign","type":"related"},{"name":"FRFB","type":"related"},{"name":"fleck retina, familial benign","type":"exact"}],"termid":"MONDO:0009235","xrefs":{"Monarch":{"xref_id":"0009235"}}}


id: GO:0140941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-methyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-methionine = H+ + N(6),N(6)-dimethyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the monomethlyated lysine residue at position 20 of histone H4, producing H4K20me2.","definition_xrefs":["RHEA:60348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0140096","GO:0008276","GO:0003674"],"is_obsolete":false,"name":"histone H4K20me methyltransferase activity","secondary_identifiers":["EC:2.1.1.362"],"synonyms":[{"name":"histone H4 methyl lysine(20) N-methyltransferase activity (H4-K20 specific)","type":"exact"},{"name":"histone H4-K20 dimethylation","type":"broad"},{"name":"histone H4K20 dimethylation","type":"broad"},{"name":"histone H4K20me methylase activity","type":"exact"}],"termid":"GO:0140941"}


id: GO:0046598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the introduction of viral entry into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral entry into host cell","termid":"GO:0046596"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral entry into host cell","synonyms":[{"name":"positive regulation of viral penetration into host cell","type":"exact"}],"termid":"GO:0046598"}


id: PBO:0043341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride nucleotide-sensitive channel 1A","termid":"PBO:0043341"}


id: FYPO:0005774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of magnesium ions measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular magnesium level","synonyms":[{"name":"decreased cellular magnesium ion level","type":"exact"},{"name":"decreased cellular magnesium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular magnesium level during vegetative growth","type":"exact"},{"name":"decreased magnesium accumulation","type":"related"},{"name":"reduced cellular magnesium level","type":"exact"}],"termid":"FYPO:0005774"}


id: MONDO:0012279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital muscular dystrophy merosin-positive (obsolete MONDO:0012279)","termid":"MONDO:0012279","xrefs":{"Monarch":{"xref_id":"0012279"}}}


id: GO:1901443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to furfural.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to furfural","termid":"GO:1901442"},{"relation_name":"negatively_regulates","term_name":"response to furfural","termid":"GO:1901426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to furfural","synonyms":[{"name":"down regulation of response to furfural","type":"exact"},{"name":"down-regulation of response to furfural","type":"exact"},{"name":"downregulation of response to furfural","type":"exact"},{"name":"inhibition of response to furfural","type":"narrow"}],"termid":"GO:1901443"}


id: FYPO:0005838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal with a cluster distal to each side of the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial aggregation","termid":"FYPO:0000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"symmetric mitochondrial aggregation","synonyms":[{"name":"bipolar intracellular mitochondrion distribution","type":"related"},{"name":"bipolar intracellular mitochondrion localisation","type":"related"},{"name":"bipolar intracellular mitochondrion localization","type":"related"},{"name":"bipolar mitochondrial aggregation","type":"related"},{"name":"bipolar mitochondrion distribution","type":"related"},{"name":"symmetric mitochondrial aggregation during mitotic cell cycle","type":"related"},{"name":"symmetric mitochondrial aggregation during vegetative growth","type":"exact"}],"termid":"FYPO:0005838"}


id: GO:0070878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a primary microRNA (pri-miRNA) transcript, an RNA molecule that is processed into a short hairpin-shaped structure called a pre-miRNA and finally into a functional miRNA. Both double-stranded and single-stranded regions of a pri-miRNA are required for binding.","definition_xrefs":["PMID:15574589","GOC:sl","PMID:15531877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"primary miRNA binding","synonyms":[{"name":"pri-miRNA binding","type":"exact"},{"name":"primary microRNA binding","type":"exact"}],"termid":"GO:0070878"}


id: PBO:0055654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3094","termid":"PBO:0055654"}


id: FYPO:0002363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"},{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002363"}


id: PBO:0077567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 273","termid":"PBO:0077567"}


id: PBO:0091965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf16","termid":"PBO:0091965"}


id: GO:1903187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GO_REF:0000058","PMID:19467235","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of vitellogenesis","termid":"GO:1903186"},{"relation_name":"negatively_regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vitellogenesis","synonyms":[{"name":"down regulation of vitellogenesis","type":"exact"},{"name":"down regulation of yolk production","type":"exact"},{"name":"down-regulation of vitellogenesis","type":"exact"},{"name":"down-regulation of yolk production","type":"exact"},{"name":"downregulation of vitellogenesis","type":"exact"},{"name":"downregulation of yolk production","type":"exact"},{"name":"inhibition of vitellogenesis","type":"narrow"},{"name":"inhibition of yolk production","type":"narrow"},{"name":"negative regulation of yolk production","type":"exact"}],"termid":"GO:1903187"}


id: PBO:0080686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIZ zinc finger","termid":"PBO:0080686"}


id: PR:P87154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon catalytic subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03630","PRO:DNx","PANTHER:PTHR10670:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon catalytic subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.13c","secondary_identifiers":["UniProtKB:P87154"],"synonyms":[{"name":"DNA polymerase II subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLE","type":"exact"}],"termid":"PR:P87154"}


id: PR:000050530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me2(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf1 gene translation product, initiator methionine removed dimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf1/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050530"}


id: PBO:0111829
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ domain","termid":"PBO:0111829"}


id: PBO:0034174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homoeology_relationship_with","termid":"PBO:0034174"}


id: PBO:0074287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 2","termid":"PBO:0074287"}


id: GO:0044823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the covalent insertion of double-stranded retroviral DNA into host DNA. Proceeds by an endonucleolytic cleavage at each 3'-OH extremity of the viral genome, named 3'-processing, followed by a strand transfer reaction leading to the insertion of the processed viral DNA into the target DNA by a trans-esterification mechanism.","definition_xrefs":["PMID:19091057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrase activity","termid":"GO:0008907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"retroviral integrase activity","termid":"GO:0044823"}


id: GO:0060175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a brain-derived neurotrophic factor and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"},{"relation_name":"is_a","term_name":"neurotrophin receptor activity","termid":"GO:0005030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0004672","GO:0016301","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"brain-derived neurotrophic factor receptor activity","synonyms":[{"name":"BDNF receptor activity","type":"related"},{"name":"BDNF-activated receptor activity","type":"exact"},{"name":"brain-derived neurotrophic factor-activated receptor activity","type":"exact"}],"termid":"GO:0060175"}


id: GO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of glucose leads to a decrease in the frequency, rate, or extent of transcription of specific RNA polymerase II-transcribed genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription by glucose","termid":"GO:0045014"},{"relation_name":"is_a","term_name":"negative regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0061987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription from RNA polymerase II promoter by glucose","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter by glucose","type":"narrow"}],"termid":"GO:0000433"}


id: SO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An A box within an RNA polymerase III type 2 promoter.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"A_box","termid":"SO:0000619"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_2","termid":"SO:0000618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_box_type_2","synonyms":[{"name":"A box type 2","type":"related"}],"termid":"SO:0001676"}


id: GO:0003805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ala and Arg-Val bonds in factor IX to form factor IXa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor XIa activity (obsolete GO:0003805)","synonyms":[{"name":"activated blood-coagulation factor XI","type":"related"},{"name":"activated plasma thromboplastin antecedent","type":"related"},{"name":"blood coagulation factor XI activity","type":"exact"},{"name":"blood-coagulation factor XIa","type":"related"},{"name":"coagulation factor XIa activity","type":"exact"},{"name":"plasma thromboplastin antecedent activity","type":"related"}],"termid":"GO:0003805"}


id: PBO:0073205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3E","termid":"PBO:0073205"}


id: GO:0008982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sugar(out) = protein histidine + sugar phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003824","GO:0022857","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","secondary_identifiers":["GO:0015455","GO:0015456","TC:4.A"],"synonyms":[{"name":"PEP--sugar phosphotransferase enzyme II activity","type":"exact"},{"name":"PEP-dependent phosphotransferase enzyme II","type":"related"},{"name":"PTS permease activity","type":"related"},{"name":"PTS transporter","type":"related"},{"name":"enzyme II of the phosphotransferase system","type":"related"},{"name":"phosphoenolpyruvate-sugar phosphotransferase enzyme II","type":"related"},{"name":"phosphohistidinoprotein-hexose phosphotransferase activity","type":"related"},{"name":"phosphoprotein factor-hexose phosophotransferase activity","type":"related"},{"name":"phosphotransfer-driven group translocator","type":"broad"},{"name":"protein-Np-phosphohistidine-sugar phosphotransferase activity","type":"exact"}],"termid":"GO:0008982"}


id: GO:0045621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte differentiation","termid":"GO:1902107"},{"relation_name":"positively_regulates","term_name":"lymphocyte differentiation","termid":"GO:0030098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte differentiation","synonyms":[{"name":"activation of lymphocyte differentiation","type":"narrow"},{"name":"positive regulation of lymphocyte development","type":"related"},{"name":"stimulation of lymphocyte differentiation","type":"narrow"},{"name":"up regulation of lymphocyte differentiation","type":"exact"},{"name":"up-regulation of lymphocyte differentiation","type":"exact"},{"name":"upregulation of lymphocyte differentiation","type":"exact"}],"termid":"GO:0045621"}


id: PBO:0041159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 14","termid":"PBO:0041159"}


id: PBO:0060600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit G2","termid":"PBO:0060600"}


id: PBO:0091981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic spindle pole body protein Dms1","termid":"PBO:0091981"}


id: PBO:0071406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 12","termid":"PBO:0071406"}


id: PBO:0050329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 31","termid":"PBO:0050329"}


id: MONDO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the thymus. Representative examples include mediastinal (thymic) large B-cell lymphoma and Hodgkin lymphoma.","definition_xrefs":["NCIT:C6451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymus cancer","termid":"MONDO:0002586"},{"relation_name":"is_a","term_name":"mediastinal malignant lymphoma","termid":"MONDO:0004021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymus lymphoma","secondary_identifiers":["MEDGEN:277818","EFO:1000054","UMLS:C1336745","DOID:10146"],"synonyms":[{"name":"Thymus lymphoma","type":"exact"},{"name":"lymphoma of Thymus","type":"exact"},{"name":"lymphoma of the Thymus","type":"exact"},{"name":"lymphoma of thymus","type":"exact"},{"name":"primary thymic lymphoma","type":"exact"},{"name":"thymic lymphoma","type":"exact"},{"name":"thymus lymphoma","type":"exact"}],"termid":"MONDO:0000951","xrefs":{"Monarch":{"xref_id":"0000951"}}}


id: PBO:0080075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 38","termid":"PBO:0080075"}


id: GO:0097099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of albumen (also called egg white). Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo.","definition_xrefs":["Wikipedia:Albumen","GOC:jj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of albumen","synonyms":[{"name":"structural constituent of egg white","type":"exact"}],"termid":"GO:0097099"}


id: GO:1990841
data:
  {"annotated_genes":["SJAG_04396","SJAG_00584","SJAG_02401","SJAG_01157","SJAG_03997","SJAG_02810","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76445,91174,92961,93845,103021,106528,108992],"is_not":false,"summary":null,"term":"GO:1990841"}]},"cv_name":"molecular_function","definition":"Binding to a section of chromatin that is associated with gene promoter sequences of DNA.","definition_xrefs":["PMID:19948729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00584":null,"SJAG_01157":null,"SJAG_02401":null,"SJAG_02773":null,"SJAG_02810":null,"SJAG_03997":null,"SJAG_04396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"promoter-specific chromatin binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990841","terms_by_termid":{"GO:1990841":null}}


id: GO:0051459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of corticotropic hormone from a cell.","definition_xrefs":["GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"corticotropin secretion","termid":"GO:0051458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of corticotropin secretion","synonyms":[{"name":"regulation of ACTH secretion","type":"exact"},{"name":"regulation of adrenocorticotropic hormone secretion","type":"exact"},{"name":"regulation of adrenocorticotropin secretion","type":"exact"},{"name":"regulation of adrenotropin hormone secretion","type":"exact"},{"name":"regulation of adrenotropin secretion","type":"exact"},{"name":"regulation of corticotropic hormone secretion","type":"exact"}],"termid":"GO:0051459"}


id: PBO:0058066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4285","termid":"PBO:0058066"}


id: PBO:0067641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 814, pseudogene","termid":"PBO:0067641"}


id: GO:0043808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lyso-ornithine lipid + acyl-[acyl-carrier protein] = ornithine lipid + [acyl-carrier protein].","definition_xrefs":["PMID:15341653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"lyso-ornithine lipid acyltransferase activity","termid":"GO:0043808"}


id: PBO:0045208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC3 divergent transcript","termid":"PBO:0045208"}


id: MONDO:0024386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of large cell lung carcinoma characterized by a predominance of clear cells that may or may not contain glycogen.","definition_xrefs":["NCIT:C4451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"large cell lung carcinoma, clear cell variant","secondary_identifiers":["ONCOTREE:CCLC","UMLS:C1707407","MEDGEN:317518"],"synonyms":[{"name":"clear cell carcinoma of lung, large cell type","type":"exact"},{"name":"clear cell carcinoma of the lung","type":"related"},{"name":"clear cell carcinoma of the lung, large cell type","type":"exact"},{"name":"clear cell lung carcinoma, large cell type","type":"exact"},{"name":"large cell lung carcinoma, clear cell variant","type":"exact"}],"termid":"MONDO:0024386","xrefs":{"Monarch":{"xref_id":"0024386"}}}


id: GO:0140562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyses the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-L-serine = UDP + [protein with EGF-like domain]-3-O-(beta-D-xylosyl)-L-serine.","definition_xrefs":["RHEA:62016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"EGF-domain serine xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.63"],"termid":"GO:0140562"}


id: PBO:0075894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression of tumorigenicity 7","termid":"PBO:0075894"}


id: PBO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex catalytic subunit Naa10 (predicted)","termid":"PBO:0002203"}


id: GO:1904316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:9321918","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"response to PAF","type":"exact"},{"name":"response to platelet-activating factor","type":"exact"}],"termid":"GO:1904316"}


id: PBO:0049941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyrate dehydrogenase","termid":"PBO:0049941"}


id: PR:O74737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-binding protein rid1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.12","synonyms":[{"name":"Spom972h-rid1","type":"exact"}],"termid":"PR:O74737"}


id: PBO:0059608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 20","termid":"PBO:0059608"}


id: PBO:0091313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC1 kinase family protein, human ADCK5 ortholog, unknown role","termid":"PBO:0091313"}


id: PBO:0068991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 235, pseudogene","termid":"PBO:0068991"}


id: GO:0061774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA.","definition_xrefs":["GOC:vw","GOC:dph","PMID:26687354"],"gene_count":0,"genotype_count":0,"name":"obsolete cohesin unloading (obsolete GO:0061774)","synonyms":[{"name":"DNA exit from the cohesin ring","type":"exact"}],"termid":"GO:0061774"}


id: GO:0038016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of an insulin receptor from the plasma membrane to the inside of the cell.","definition_xrefs":["GOC:bf","PMID:9609114","PMID:3907718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"insulin receptor internalization","synonyms":[{"name":"insulin receptor endocytosis","type":"broad"}],"termid":"GO:0038016"}


id: PBO:0048178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase regulator","termid":"PBO:0048178"}


id: PBO:0055920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A8, pseudogene","termid":"PBO:0055920"}


id: SO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A C-terminus protein motif (CAAX) serving as a post-translational prenylation site modified by the attachment of either a farnesyl or a geranyl-geranyl group to a cysteine residue. Farnesyltransferase recognizes CaaX boxes where X = M, S, Q, A, or C, whereas Geranylgeranyltransferase I recognizes CaaX boxes with X = L or E.","direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"CAAX_box","synonyms":[{"name":"CAAX box","type":"exact"}],"termid":"SO:0002230"}


id: GO:0008537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex that activates the hydrolysis of small nonubiquitinated peptides by binding to the proteasome core complex.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome activator complex","synonyms":[{"name":"PA28","type":"narrow"}],"termid":"GO:0008537"}


id: PBO:0039791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 2","termid":"PBO:0039791"}


id: PBO:0048823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 8","termid":"PBO:0048823"}


id: MONDO:0006820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Death of cells in the kidney cortex, a common final result of various renal injuries including hypoxia; ischemia; and drug toxicity.","definition_xrefs":["MESH:D007673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney cortex necrosis","secondary_identifiers":["ICD9:583.6","SCTID:444691002","UMLS:C0022656","MedDRA:10023414","DOID:2973","MEDGEN:9634"],"synonyms":[{"name":"renal cortical necrosis","type":"exact"}],"termid":"MONDO:0006820","xrefs":{"Monarch":{"xref_id":"0006820"}}}


id: FYPO:0008218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic S/G2 cell cycle phase transition normally.","definition_xrefs":["PMID:10947840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic S/G2 phase transition","termid":"FYPO:0008218"}


id: FYPO:0005939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the replicative lifespan of a cell population, i.e. the number of divisions cells in the population undergo before death, is lower than normal.","definition_xrefs":["PomBase:mah","PMID:28139976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased replicative lifespan","synonyms":[{"name":"decreased cell population replicative lifespan","type":"exact"},{"name":"decreased population replicative lifespan","type":"exact"},{"name":"reduced replicative lifespan","type":"exact"}],"termid":"FYPO:0005939"}


id: MONDO:0016569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare lymphatic malformation (obsolete MONDO:0016569)","termid":"MONDO:0016569","xrefs":{"Monarch":{"xref_id":"0016569"}}}


id: PBO:0046665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic stem cell related","termid":"PBO:0046665"}


id: GO:0034603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + NAD(P)+ = acetyl-CoA + CO2 + NAD(P)H.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase activity","termid":"GO:0004738"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyruvate dehydrogenase [NAD(P)+] activity","termid":"GO:0034603"}


id: GO:1904029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:als","PMID:22995177","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein kinase activity (obsolete GO:1904029)","termid":"GO:1904029"}


id: MONDO:0033534
data:
  {"annotated_genes":["SJAG_04378"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85124],"is_not":false,"summary":null,"term":"MONDO:0033534"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 46","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618952","DOID:0112115","MEDGEN:1752252","UMLS:C5436466"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 46","type":"related"},{"name":"COXPD46","type":"related"},{"name":"combined oxidative phosphorylation defiency 46","type":"exact"}],"termid":"MONDO:0033534","terms_by_termid":{"MONDO:0033534":null},"xrefs":{"Monarch":{"xref_id":"0033534"}}}


id: GO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfonate + 2-oxoglutarate + O2 = sulfite + aminoacetaldehyde + succinate + CO2.","definition_xrefs":["GOC:clt","PMID:10482536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfonate dioxygenase activity","synonyms":[{"name":"sulfonate/alpha-ketoglutarate dioxygenase activity","type":"exact"},{"name":"sulphonate dioxygenase activity","type":"exact"}],"termid":"GO:0000907"}


id: MOD:01845
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue and an L-proline residue to L-proline 5-hydroxyoxazole-4-carbothionic acid.","definition_xrefs":["RESID:AA0551","PubMed:18729522","PubMed:15361623","PubMed:20961038","PubMed:21254756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-proline residue","termid":"MOD:02054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-proline 5-hydroxyoxazole-4-carbothionic acid","synonyms":[{"name":"(4Z)-4-[hydroxy(sulfanyl)methylidene]-2-[(2S)-pyrrolidin-2-yl]-1,3-oxazol-5(4H)-one [tautomer]","type":"exact"},{"name":"5-hydroxy-2-[(2S)-pyrrolidin-2-yl]-1,3-oxazole-4-carbothioic O-acid","type":"exact"},{"name":"CROSSLNK Proline 5-hydroxy-oxazole-4-carbothionic acid (Pro-Cys)","type":"exact"},{"name":"L-proline 5-hydroxy-oxazole-4-carbothionic acid","type":"exact"}],"termid":"MOD:01845"}


id: GO:0004018
data:
  {"annotated_genes":["SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76529],"is_not":false,"summary":null,"term":"GO:0004018"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP.","definition_xrefs":["RHEA:16853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:AMPSYN-RXN","KEGG_REACTION:R01083"],"synonyms":[{"name":"6-N-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"adenylosuccinase activity","type":"broad"},{"name":"adenylosuccinate lyase activity","type":"broad"},{"name":"succino AMP-lyase activity","type":"broad"}],"termid":"GO:0004018","terms_by_termid":{"GO:0004018":null}}


id: PBO:0063588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 3","termid":"PBO:0063588"}


id: FYPO:0002982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation during vegetative growth (obsolete FYPO:0002982)","synonyms":[{"name":"abolished peptidyl-serine phosphorylation during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation during mitotic cell cycle","type":"related"},{"name":"protein serine phosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002982"}


id: GO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ventricular septum morphogenesis","termid":"GO:0060412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membranous septum morphogenesis","termid":"GO:0003149"}


id: MONDO:0015316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital laryngeal palsy is a rare larynx anomaly characterized by unilateral or bilateral paralysis of the vocal cords as a result of dysfunction of the motor nerve supply to the larynx. Patients typically present at birth (or shortly thereafter) with stridor, weak or breathy cry, dysphonia or aphonia, feeding or aspiration difficulties and, occasionally, respiratory compromise. Neurological disease, masses that cause compression and aberrant vessels are often associated. Most cases resolve spontaneously over 6-12 months.","definition_xrefs":["Orphanet:137932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital laryngeal palsy","secondary_identifiers":["MEDGEN:96003","UMLS:C0396058","GARD:12713","icd11.foundation:1508780420"],"synonyms":[{"name":"congenital vocal cord paralysis","type":"exact"}],"termid":"MONDO:0015316","xrefs":{"Monarch":{"xref_id":"0015316"}}}


id: PBO:0079619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L4 (pseudogene)","termid":"PBO:0079619"}


id: FYPO:0008053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and mRNA intron acceptor is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-RNA interaction","termid":"FYPO:0002134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0002131","FYPO:0000707"],"is_obsolete":false,"name":"decreased intron acceptor binding","synonyms":[{"name":"'decreased 3' intron binding'","type":"exact"}],"termid":"FYPO:0008053"}


id: MONDO:0008032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1A (obsolete MONDO:0008032)","termid":"MONDO:0008032","xrefs":{"Monarch":{"xref_id":"0008032"}}}


id: GO:0045510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-24.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-24 binding","synonyms":[{"name":"IL-24 binding","type":"exact"}],"termid":"GO:0045510"}


id: PBO:0059888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 11","termid":"PBO:0059888"}


id: PBO:0089837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L25","termid":"PBO:0089837"}


id: MONDO:0013325
data:
  {"annotated_genes":["SJAG_02211"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86786],"is_not":false,"summary":null,"term":"MONDO:0013325"}]},"cv_name":"mondo","definition":"COG5-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case to date by moderate mental retardation with slow and inarticulate speech, truncal ataxia, and mild hypotonia.","definition_xrefs":["Orphanet:263487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02211":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"COG5-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:721100009","MEDGEN:462226","GARD:12348","OMIM:613612","DOID:0070261","UMLS:C3150876"],"synonyms":[{"name":"CDG III","type":"related"},{"name":"CDG syndrome type 3","type":"related"},{"name":"CDG syndrome type III","type":"exact"},{"name":"CDG-III","type":"exact"},{"name":"CDG2I","type":"exact"},{"name":"COG5-CDG","type":"exact"},{"name":"COG5-CDG (CDG-III)","type":"related"},{"name":"COG5-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type III","type":"exact"},{"name":"congenital disorder of glycosylation type 2i","type":"exact"},{"name":"congenital disorder of glycosylation type III","type":"exact"},{"name":"congenital disorder of glycosylation, type III","type":"related"}],"termid":"MONDO:0013325","terms_by_termid":{"MONDO:0013325":null},"xrefs":{"Monarch":{"xref_id":"0013325"}}}


id: GO:1903808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tyrosine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:23895341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine transport","termid":"GO:0015828"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-tyrosine import across plasma membrane","secondary_identifiers":["GO:0036232"],"synonyms":[{"name":"L-tyrosine import","type":"broad"},{"name":"L-tyrosine import into cell","type":"exact"},{"name":"L-tyrosine uptake","type":"exact"}],"termid":"GO:1903808"}


id: GO:0039682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of unidirectional viral DNA replication that takes place on a circular DNA to rapidly produce numerous copies of the viral genome. Involves creating a nick in one strand of the circular DNA molecule at the origin of replication. DNA is then synthesized by DNA polymerase. Using the non-nicked strand as a template, replication proceeds around the circular DNA molecule, displacing the nicked strand as single-stranded DNA.","definition_xrefs":["Wikipedia:Rolling_circle_replication","GOC:bf","GOC:jl","VZ:915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA strand displacement replication","termid":"GO:0039687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"rolling circle viral DNA replication","termid":"GO:0039682"}


id: MONDO:0006378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant mesothelioma that arises from the pleura and is characterized by the presence of cells with epithelioid morphology. The epithelioid cells usually have eosinophilic cytoplasm, bland nuclei, and form tubulopapillary, microglandular, or sheet-like patterns.","definition_xrefs":["NCIT:C45662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pleural mesothelioma","termid":"MONDO:0005112"},{"relation_name":"is_a","term_name":"malignant epithelioid mesothelioma","termid":"MONDO:0005599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleural epithelioid mesothelioma","secondary_identifiers":["MEDGEN:318031","UMLS:C1709574","EFO:1000484"],"synonyms":[{"name":"malignant epithelioid mesothelioma of pleura","type":"exact"},{"name":"pleura malignant epithelioid mesothelioma","type":"exact"},{"name":"pleural epithelioid mesothelioma","type":"exact"}],"termid":"MONDO:0006378","xrefs":{"Monarch":{"xref_id":"0006378"}}}


id: PBO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane translocase Oxa102","termid":"PBO:0004241"}


id: PBO:0080252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 15 pseudogene","termid":"PBO:0080252"}


id: PBO:0083495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL168C/SET2","termid":"PBO:0083495"}


id: PBO:0064557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannose kinase","termid":"PBO:0064557"}


id: GO:0048264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in the determination of the identity of part of an organism or organ where those parts are of the type that occur in the ventral region. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"determination of dorsal/ventral asymmetry","termid":"GO:0048262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of ventral identity","synonyms":[{"name":"determination of abaxial identity","type":"exact"}],"termid":"GO:0048264"}


id: PBO:0057978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3713","termid":"PBO:0057978"}


id: GO:0036123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 dimethylation (obsolete GO:0036123)","synonyms":[{"name":"histone H3 K9 dimethylation","type":"exact"},{"name":"histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:0036123"}


id: PBO:0076987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 5","termid":"PBO:0076987"}


id: PBO:0077263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 11, pseudogene","termid":"PBO:0077263"}


id: PBO:0059380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 5","termid":"PBO:0059380"}


id: GO:0035391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The maintenance of chromatin in a transcriptionally silent state such as heterochromatin at silent mating-type loci.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of chromatin silencing at silent mating-type cassette (obsolete GO:0035391)","termid":"GO:0035391"}


id: MONDO:0009619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-micromelia syndrome","secondary_identifiers":["UMLS:C1855079","OMIM:251230","MEDGEN:381553","DOID:0081432","MESH:C565382","Orphanet:572768","GARD:18011"],"synonyms":[{"name":"MIMIS","type":"related"},{"name":"microcephaly-micromelia syndrome","type":"exact"}],"termid":"MONDO:0009619","xrefs":{"Monarch":{"xref_id":"0009619"}}}


id: GO:0098918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of synapse","termid":"GO:0098918"}


id: GO:2000784
data:
  {"annotated_genes":["SJAG_02536","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107413,116393],"is_not":false,"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:Mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000771"},{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity regulating cell shape","termid":"GO:2000782"},{"relation_name":"positively_regulates","term_name":"establishment of cell polarity regulating cell shape","termid":"GO:0071964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"positive regulation of establishment of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000784","terms_by_termid":{"GO:2000784":null}}


id: PBO:0027760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_prospore_membrane","termid":"PBO:0027760"}


id: GO:0046409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate or quinate ester of p-coumaric acid + NADPH + H+ + O2 = caffeic acid conjugate (caffeoyl shikimic acid or chlorogenic acid) + H2O + NADP+.","definition_xrefs":["PMID:11429408","PMID:11891223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"p-coumarate 3-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP98A3","type":"narrow"}],"termid":"GO:0046409"}


id: PBO:0054053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1395","termid":"PBO:0054053"}


id: MONDO:0021132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An overproduction of parathyroid hormone that is autonomous and often associated with chronic secondary hyperparathyroidism.","definition_xrefs":["NCIT:C114821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperparathyroidism","termid":"MONDO:0001741"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tertiary hyperparathyroidism","secondary_identifiers":["ICD9:588.89","UMLS:C0271858","SCTID:78200003","MEDGEN:488837","icd11.foundation:10683191"],"synonyms":[{"name":"tertiary hyperparathyroidism","type":"exact"}],"termid":"MONDO:0021132","xrefs":{"Monarch":{"xref_id":"0021132"}}}


id: PBO:0071154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 19","termid":"PBO:0071154"}


id: MONDO:0025690
data:
  {"annotated_genes":["SJAG_03670"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86326],"is_not":false,"summary":null,"term":"MONDO:0025690"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly, epilepsy, and diabetes syndrome","termid":"MONDO:0100328"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03670":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, epilepsy, and diabetes syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619278","MEDGEN:1782107","UMLS:C5543294","GARD:18439"],"synonyms":[{"name":"MEDS2","type":"exact"}],"termid":"MONDO:0025690","terms_by_termid":{"MONDO:0025690":null},"xrefs":{"Monarch":{"xref_id":"0025690"}}}


id: GO:0060044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation.","definition_xrefs":["GOC:rph","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle tissue growth","termid":"GO:0055022"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell proliferation","termid":"GO:0060043"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell proliferation","termid":"GO:0060038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell proliferation","synonyms":[{"name":"negative regulation of heart muscle cell proliferation","type":"exact"}],"termid":"GO:0060044"}


id: MONDO:0006475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A renal cell carcinoma characterized by morphologic features that do not fit easily into one of the other well-defined categories of renal cell carcinoma. Examples of such features include mixtures of morphologic patterns, mucin production, and sarcomatoid morphology.","definition_xrefs":["NCIT:C27892"],"gene_count":0,"genotype_count":0,"name":"obsolete unclassified renal cell carcinoma (obsolete MONDO:0006475)","secondary_identifiers":["ONCOTREE:URCC"],"synonyms":[{"name":"URCC","type":"related"},{"name":"unclassified renal cell cancer","type":"exact"},{"name":"unclassified renal cell carcinoma","type":"exact"}],"termid":"MONDO:0006475","xrefs":{"Monarch":{"xref_id":"0006475"}}}


id: PBO:0057225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 381","termid":"PBO:0057225"}


id: PBO:0059853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 6","termid":"PBO:0059853"}


id: GO:0034828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-(2-oxocyclohexyl)-2-hydroxy-buta-2,4-dienoate + H2O = 2-hydroxydec-2,4-diene-1,10-dioate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-(2-oxocyclohexyl)-2-hydroxy-buta-2,4-dienoate hydrolase activity (obsolete GO:0034828)","termid":"GO:0034828"}


id: FYPO:0003736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is normal (i.e. indistinguishable from wild type). The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic index","termid":"FYPO:0003736"}


id: GO:0016634
data:
  {"annotated_genes":["SJAG_04944","SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004109"},{"annotations":[72207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["EC:1.3.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02876":null,"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016634","terms_by_termid":{"GO:0004109":null,"GO:0004729":null}}


id: PBO:0039770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AQP4 antisense RNA 1","termid":"PBO:0039770"}


id: PBO:0051548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 7 receptor","termid":"PBO:0051548"}


id: FYPO:0003379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division, in which two chromatids in each chromosome are normally separated, does not occur.","definition_xrefs":["PomBase:mah","GO:0007135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis","termid":"FYPO:0000474"},{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished meiosis II","synonyms":[{"name":"abolished second meiotic nuclear division","type":"exact"},{"name":"absent meiosis II","type":"exact"},{"name":"meiosis II abolished","type":"exact"},{"name":"meiosis II: absent","type":"exact"}],"termid":"FYPO:0003379"}


id: PBO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 70","termid":"PBO:0042856"}


id: MONDO:0013226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Combined immunodeficiency with faciooculoskeletal anomalies is an extremely rare combined immunodeficiency disorder characterized by primary immunodeficiency manifesting with repeated bacterial, viral and fungal infections, in association with neurological manifestations (hypotonia, cerebellar ataxia, myoclonic seizures), developmental delay, optic atrophy, facial dysmorphism (high forehead, hypoplastic supraorbital ridges, palpebral edema, hypertelorism, flat nasal bridge, broad nasal root and tip, anteverted nares, thin lower lip overlapped by upper lip, square chin) and skeletal anomalies (short metacarpals/metatarsals with cone-shaped epiphyses, osteopenia).","definition_xrefs":["Orphanet:221139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency with faciooculoskeletal anomalies","secondary_identifiers":["MEDGEN:442377","GARD:17139","OMIM:613328","UMLS:C2750068","MESH:C567641"],"synonyms":[{"name":"ROIFMAN-Chitayat syndrome","type":"related"},{"name":"Roifman-Chitayat syndrome","type":"exact"},{"name":"Roifman-Chitayat syndrome, digenic","type":"exact"},{"name":"combined immunodeficiency, Facial Dysmorphism, optic nerve atrophy, skeletal anomalies, and developmental delay","type":"related"}],"termid":"MONDO:0013226","xrefs":{"Monarch":{"xref_id":"0013226"}}}


id: GO:0140125
data:
  {"annotated_genes":["SJAG_04673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100464],"is_not":false,"summary":null,"term":"GO:0140125"}]},"cv_name":"biological_process","definition":"The directed movement of thiamine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine transmembrane transport","termid":"GO:0071934"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"thiamine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140125","terms_by_termid":{"GO:0140125":null}}


id: PBO:0077321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59 like","termid":"PBO:0077321"}


id: PBO:0046355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 13","termid":"PBO:0046355"}


id: PBO:0043177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold inducible RNA binding protein","termid":"PBO:0043177"}


id: PBO:0067990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 292","termid":"PBO:0067990"}


id: SO:1000107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000107 mutation_causing_out_of_frame_polypeptide_N_terminal_elongation (obsolete SO:1000107)","synonyms":[{"name":"mutation causing out of frame polypeptide N terminal elongation","type":"exact"},{"name":"out of frame polypeptide N-terminal elongation","type":"exact"}],"termid":"SO:1000107"}


id: PBO:0046681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic testis differentiation homolog C","termid":"PBO:0046681"}


id: FYPO:0004376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"increased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"increased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004376"}


id: MONDO:0013322
data:
  {"annotated_genes":["SJAG_03657"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86956],"is_not":false,"summary":null,"term":"MONDO:0013322"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign adult familial myoclonic epilepsy","termid":"MONDO:0019448"},{"relation_name":"is_a","term_name":"epilepsy, familial adult myoclonic","termid":"MONDO:0000160"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613608","MESH:C567098","DOID:0111695","UMLS:C3150860","GARD:18084","MEDGEN:462210"],"synonyms":[{"name":"FAME3","type":"exact"},{"name":"cortical myoclonic tremor with epilepsy, familial, 3","type":"related"},{"name":"epilepsy, familial ADULT myoclonic, 3","type":"related"}],"termid":"MONDO:0013322","terms_by_termid":{"MONDO:0013322":null},"xrefs":{"Monarch":{"xref_id":"0013322"}}}


id: MONDO:0018829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of schizencephaly that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizencephaly","termid":"MONDO:0010011"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"COL4A1-related disorder","termid":"MONDO:0800461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"familial schizencephaly","secondary_identifiers":["MEDGEN:419186","GARD:17876","MESH:C538514","Orphanet:481986","UMLS:C2931870"],"synonyms":[{"name":"familial schizencephaly","type":"exact"},{"name":"hereditary schizencephaly","type":"exact"}],"termid":"MONDO:0018829","xrefs":{"Monarch":{"xref_id":"0018829"}}}


id: PBO:0059868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 6","termid":"PBO:0059868"}


id: MONDO:0034901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ATP13A2-related parkinsonism (obsolete MONDO:0034901)","secondary_identifiers":["Orphanet:514980"],"termid":"MONDO:0034901","xrefs":{"Monarch":{"xref_id":"0034901"}}}


id: GO:2001039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to drug","termid":"GO:2001024"},{"relation_name":"is_a","term_name":"regulation of cellular response to drug","termid":"GO:2001038"},{"relation_name":"negatively_regulates","term_name":"cellular response to xenobiotic stimulus","termid":"GO:0071466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to drug","termid":"GO:2001039"}


id: PBO:0075149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 5","termid":"PBO:0075149"}


id: SO:0001943
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K4_acetylation_site","synonyms":[{"name":"H3K4 acetylation site","type":"exact"},{"name":"H3K4ac","type":"exact"}],"termid":"SO:0001943"}


id: PBO:0086437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein with a role in calcium uptake; non-essential protein; mutant has cell wall defects and Ca+ uptake deficiencies; transcription is induced under conditions of zinc deficiency","termid":"PBO:0086437"}


id: PBO:0064688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 24","termid":"PBO:0064688"}


id: MONDO:0009521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute myelocytic, with polyposis coli and colon cancer","secondary_identifiers":["MEDGEN:383699","MESH:C565441","OMIM:246470","UMLS:C1855505"],"synonyms":[{"name":"leukemia, acute myelocytic, with polyposis coli and colon cancer","type":"exact"}],"termid":"MONDO:0009521","xrefs":{"Monarch":{"xref_id":"0009521"}}}


id: PBO:0054642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2047","termid":"PBO:0054642"}


id: MONDO:0958302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A renal cell carcinoma with MiT translocations that is characterized by the presence of the chromosomal translocation t(6;11) which fuses the TFEB transcription factor gene, with the MALAT1 gene.","definition_xrefs":["DOID:0081414|https://orcid.org/0000-0002-4142-7153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MIT family translocation renal cell carcinoma","termid":"MONDO:0017886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"TFEB-rearranged renal cell carcinoma","secondary_identifiers":["UMLS:C4745249","DOID:0081414","MEDGEN:1664261"],"termid":"MONDO:0958302","xrefs":{"Monarch":{"xref_id":"0958302"}}}


id: GO:0097675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Hrt3 in S. cerevisiae (Pof7 in S. pombe).","definition_xrefs":["PMID:15147268","GOC:jd","PMID:14747994","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Hrt3/Pof7 ubiquitin ligase complex","termid":"GO:0097675"}


id: GO:0004829
data:
  {"annotated_genes":["SJAG_01235","SJAG_03585"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70337,73277],"is_not":false,"summary":null,"term":"GO:0004829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr).","definition_xrefs":["EC:6.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01235":null,"SJAG_03585":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016874","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"threonine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:THREONINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380201","Reactome:R-HSA-380002","RHEA:24624"],"synonyms":[{"name":"L-threonine:tRNAThr ligase (AMP-forming)","type":"related"},{"name":"TRS","type":"related"},{"name":"threonine translase activity","type":"related"},{"name":"threonine-transfer ribonucleate synthetase activity","type":"related"},{"name":"threonyl ribonucleic synthetase activity","type":"related"},{"name":"threonyl-tRNA synthetase activity","type":"exact"},{"name":"threonyl-transfer RNA synthetase activity","type":"related"},{"name":"threonyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"threonyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004829","terms_by_termid":{"GO:0004829":null}}


id: PR:O94745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial-processing peptidase subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11851:SF49","PRO:DNx","OMA:SCHPO03131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial-processing peptidase subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.12c","secondary_identifiers":["UniProtKB:O94745"],"synonyms":[{"name":"Spom972h-PMPCA","type":"exact"},{"name":"alpha-MPP (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94745"}


id: MOD:00418
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an (pyridin-3-yl)acetyl group.","definition_xrefs":["Unimod:25","PubMed:9276974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridylacetylated residue","synonyms":[{"name":"Pyridylacetyl","type":"related"},{"name":"pyridylacetyl","type":"related"}],"termid":"MOD:00418"}


id: PBO:0065447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 4","termid":"PBO:0065447"}


id: PBO:0065613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 7","termid":"PBO:0065613"}


id: GO:0061383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of shaping a trabecula in an organ. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trabecula morphogenesis","termid":"GO:0061383"}


id: MONDO:0018965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare renal disease characterized by glomerular nephropathy with hematuria progressing to end-stage renal disease (ESRD), frequently associated with sensorineural deafness, and occasionally with ocular anomalies.","definition_xrefs":["Orphanet:63"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Alport syndrome","secondary_identifiers":["icd11.foundation:1170919425","NORD:756","GARD:5785","NANDO:2200126","NANDO:1200712","ICD10CM:Q87.81","NCIT:C34842","OMIMPS:301050","MEDGEN:339209","MedDRA:10001843","UMLS:C1567741","DOID:10983","MESH:D009394"],"synonyms":[{"name":"Alport deafness-nephropathy","type":"exact"},{"name":"Alport syndrome","type":"exact"},{"name":"Alport's syndrome","type":"exact"},{"name":"hereditary nephritis","type":"broad"}],"termid":"MONDO:0018965","xrefs":{"Monarch":{"xref_id":"0018965"}}}


id: PBO:0063830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD and ring finger domains 1","termid":"PBO:0063830"}


id: PBO:0055480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2913","termid":"PBO:0055480"}


id: PBO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_beta-glucan_level","termid":"PBO:0030613"}


id: SO:0001878
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that falls entirely or partially within a genomic feature.","definition_xrefs":["EBI:fc","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_variant","synonyms":[{"name":"feature alteration","type":"exact"}],"termid":"SO:0001878"}


id: MONDO:0018020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mercury poisoning is caused mainly through ingestion or inhalation of any of the 3 forms of mercury, elemental, organic, and inorganic. Exposure to elemental mercury affects the pulmonary (inhalation of mercury vapors causes coughing, chills, fever, shortness of breath), dermatological (mild swelling, vesiculation, scaling, irritation, urticaria, erythema and allergic contact dermatitis accompanied by pain), and peripheral and central nervous (CNS) systems (depression, paranoia, extreme irritability, hallucinations, inability to concentrate, memory loss, hands, head, lips, tongue, jaw and eyelids tremors, weight loss, perpetually low body temperature, drowsiness, headaches, insomnia, fatigue). Exposure to inorganic mercury generally causes development of a metallic taste, local oropharyngeal pain, nausea, vomiting, bloody diarrhea, colic abdominal pain, renal dysfunction and, neurologic abnormalities; while that to organic mercury can lead to delayed neurotoxicity.","definition_xrefs":["Orphanet:330021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury poisoning","secondary_identifiers":["GARD:7021","ICD9:985.0","MESH:D008630","SCTID:85180002","EFO:1001810"],"synonyms":[{"name":"Mercury intoxication","type":"exact"},{"name":"Mercury toxicity","type":"related"},{"name":"hydrargyria","type":"exact"},{"name":"mercurialism","type":"exact"}],"termid":"MONDO:0018020","xrefs":{"Monarch":{"xref_id":"0018020"}}}


id: GO:0014001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sclerenchyma cell. A sclerenchyma cell is a plant cell with thick lignified walls, normally dead at maturity and specialized for structural strength. Includes fiber cells, that are greatly elongated; and sclereids, that are more isodiametric. Intermediate types exist. Cells may or may not be devoid of protoplasm at maturity. Cell form and size are variable.","definition_xrefs":["PO:0000077","CL:0000276","GOC:ef","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerenchyma cell differentiation","termid":"GO:0014001"}


id: PBO:0061939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily N member 2","termid":"PBO:0061939"}


id: PR:000050519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the scr1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein scr1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1D7.02c","termid":"PR:000050519"}


id: PBO:0031010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level","termid":"PBO:0031010"}


id: MONDO:0020581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor with perivascular epithelioid cell differentiation characterized by the absence of pleomorphism and scarcity or absence of mitotic figures.","definition_xrefs":["NCIT:C121791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"},{"relation_name":"is_a","term_name":"benign soft tissue neoplasm","termid":"MONDO:0044335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign PEComa","secondary_identifiers":["UMLS:C3839685","MEDGEN:825530"],"synonyms":[{"name":"benign PEComa","type":"exact"},{"name":"benign PEComa, nos","type":"exact"},{"name":"benign PEComa, not otherwise specified","type":"exact"},{"name":"benign neoplasm with perivascular epithelioid cell differentiation","type":"exact"},{"name":"neoplasm with perivascular epithelioid cell differentiation, benign","type":"exact"},{"name":"typical PEComa","type":"exact"}],"termid":"MONDO:0020581","xrefs":{"Monarch":{"xref_id":"0020581"}}}


id: PBO:0049142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 1","termid":"PBO:0049142"}


id: GO:1902120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic spindle elongation.","definition_xrefs":["GOC:TermGenie","PMID:23370392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic nuclear division","termid":"GO:0045835"},{"relation_name":"is_a","term_name":"regulation of meiotic spindle elongation","termid":"GO:1902119"},{"relation_name":"negatively_regulates","term_name":"meiotic spindle elongation","termid":"GO:0051232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"negatively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"negative regulation of meiotic spindle elongation","synonyms":[{"name":"down regulation of meiotic spindle elongation","type":"exact"},{"name":"down regulation of spindle elongation during meiosis","type":"exact"},{"name":"down-regulation of meiotic spindle elongation","type":"exact"},{"name":"down-regulation of spindle elongation during meiosis","type":"exact"},{"name":"downregulation of meiotic spindle elongation","type":"exact"},{"name":"downregulation of spindle elongation during meiosis","type":"exact"},{"name":"inhibition of meiotic spindle elongation","type":"narrow"},{"name":"inhibition of spindle elongation during meiosis","type":"exact"},{"name":"negative regulation of spindle elongation during meiosis","type":"exact"}],"termid":"GO:1902120"}


id: PBO:0078511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 5","termid":"PBO:0078511"}


id: MONDO:0020025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare male infertility.","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility (obsolete MONDO:0020025)","secondary_identifiers":["Orphanet:98048"],"synonyms":[{"name":"rare male infertility","type":"exact"}],"termid":"MONDO:0020025","xrefs":{"Monarch":{"xref_id":"0020025"}}}


id: GO:0010141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which guanine, xanthine and their nucleoside from purine nucleotides breakdown are converted back to purine nucleotides. The pathway is important in cells where there is no de-novo purine nucleotides biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine, xanthine and their nucleoside salvage (obsolete GO:0010141)","synonyms":[{"name":"guanine, xanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010141"}


id: MONDO:0060778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Fanconi renotubular syndrome that occurs in an adult. Adult Fanconi syndrome is typically acquired.","definition_xrefs":["MONDO:patterns/adult"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi renotubular syndrome","termid":"MONDO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"adult Fanconi syndrome","secondary_identifiers":["NCIT:C4377","UMLS:C0341703","MEDGEN:137960"],"synonyms":[{"name":"adult Fanconi syndrome","type":"exact"},{"name":"adult Fanconi's syndrome","type":"exact"}],"termid":"MONDO:0060778","xrefs":{"Monarch":{"xref_id":"0060778"}}}


id: PBO:0052943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 27-1","termid":"PBO:0052943"}


id: MONDO:1012162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital melanoma, non-human animal","termid":"MONDO:1011811"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital melanoma, pig","secondary_identifiers":["OMIA:000634-9823"],"termid":"MONDO:1012162","xrefs":{"Monarch":{"xref_id":"1012162"}}}


id: MONDO:1010928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pseudomyotonia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudomyotonia, non-human animal","termid":"MONDO:1010201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pseudomyotonia, cattle","secondary_identifiers":["OMIA:001464-9913"],"termid":"MONDO:1010928","xrefs":{"Monarch":{"xref_id":"1010928"}}}


id: PBO:0070592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 58","termid":"PBO:0070592"}


id: GO:0033522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of one or more ubiquitin groups.","definition_xrefs":["PMID:15509584","PMID:18430235","PMID:16473935","GOC:bf","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A ubiquitination (obsolete GO:0033522)","termid":"GO:0033522"}


id: GO:0051927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051927)","synonyms":[{"name":"down regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"down-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"downregulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"inhibition of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"negative regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"negative regulation of calcium transport via voltage gated calcium channel","type":"related"}],"termid":"GO:0051927"}


id: PBO:0061260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like C","termid":"PBO:0061260"}


id: FYPO:0002423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that forms a septum but does not divide, and that has an abnormal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, septated cells with abnormal cell shape","synonyms":[{"name":"inviable after spore germination, septated undivided abnormally shaped cell","type":"exact"},{"name":"inviable after spore germination, undivided septated cells with abnormal cell shape","type":"exact"},{"name":"inviable following spore germination, without cell division, septated cells with abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, without cell division, septated cells with abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, without cell division, septated cells with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002423"}


id: GO:0009173
data:
  {"annotated_genes":["SJAG_03164","SJAG_00694","SJAG_00197","SJAG_04709","SJAG_03708","SJAG_00964","SJAG_04354","SJAG_04713","SJAG_00444","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58901,60888,59216,61603,57041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[67585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[87210,88197,91728,92727,67586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009173","terms_by_termid":{"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: FYPO:0004319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}


id: GO:0047359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkenyl-2-acylglycerol + CDP-choline = plasmenylcholine + CMP.","definition_xrefs":["EC:2.7.8.22","MetaCyc:2.7.8.22-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1-alkenyl-2-acylglycerol choline phosphotransferase activity","secondary_identifiers":["RHEA:36227"],"synonyms":[{"name":"CDP-choline-1-alkenyl-2-acyl-glycerol phosphocholinetransferase activity","type":"related"},{"name":"CDP-choline:1-alkenyl-2-acylglycerol cholinephosphotransferase activity","type":"related"}],"termid":"GO:0047359"}


id: FYPO:0007031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips  does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during mitotic interphase","termid":"FYPO:0003329"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006502"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cell cortex of cell tip during mitotic interphase","synonyms":[{"name":"abolished protein localisation to cell cortex of cell tip during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cell cortex of cell end during mitotic interphase during vegetative growth","type":"related"},{"name":"abolished protein localization to cell cortex of cell tip during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished protein localization to cell tip cortex during mitotic interphase","type":"exact"},{"name":"protein localization to cell cortex of cell tip abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007031"}


id: PBO:0089952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid biosynthesis protein","termid":"PBO:0089952"}


id: PBO:0069443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 708, pseudogene","termid":"PBO:0069443"}


id: PBO:0002933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase (predicted)","termid":"PBO:0002933"}


id: PBO:0000818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Sap114","termid":"PBO:0000818"}


id: GO:0051757
data:
  {"annotated_genes":["SJAG_02104","SJAG_04457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109980,93639],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"}]},"cv_name":"biological_process","definition":"The process in which sister chromatids are physically detached from each other during meiosis.","definition_xrefs":["PMID:16325576","GOC:ai","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic sister chromatid resolution","type":"exact"}],"termid":"GO:0051757","terms_by_termid":{"GO:0051755":null}}


id: MONDO:0008566
data:
  {"annotated_genes":["SJAG_03453","SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85611,87053,87054],"is_not":false,"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"},{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer, nonmedullary, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5206","MESH:C572845","MEDGEN:904175","OMIM:188470","UMLS:C4225426"],"synonyms":[{"name":"FTC","type":"related"},{"name":"NMTC2","type":"related"},{"name":"thyroid cancer, follicular","type":"related"},{"name":"thyroid cancer, nonmedullary, 2","type":"exact"},{"name":"thyroid cancer, nonmedullary, 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"thyroid cancer, nonmedullary, type 2","type":"exact"},{"name":"thyroid carcinoma, follicular","type":"related"},{"name":"thyroid carcinoma, follicular, autosomal dominant, somatic mutation","type":"exact"},{"name":"thyroid carcinoma, follicular, somatic","type":"exact"}],"termid":"MONDO:0008566","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0008566"}}}


id: FYPO:0002989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transmembrane transport messenger RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of transmembrane transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of transmembrane transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of transmembrane transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of transmembrane transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased mRNA level of genes involved in transmembrane transport during vegetative growth","type":"exact"},{"name":"increased mRNA level of transmembrane transport genes during vegetative growth","type":"exact"},{"name":"increased transmembrane transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002989"}


id: MONDO:0013648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial progressive hyperpigmentation is a rare, genetic, skin pigmentation anomaly disorder characterized by irregular patches of hyperpigmented skin which present at birth or in early infancy and increase in size, number and confluence with age. Affected areas of the body include the face, neck, trunk and limbs, as well as the palms, soles, oral mucosa and conjuctiva. No hypogmentation macules are observed and no systemic diseases are associated.","definition_xrefs":["Orphanet:79146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial progressive hyperpigmentation","secondary_identifiers":["OMIM:614233","GARD:16706","icd11.foundation:1808730427","SCTID:715630006"],"synonyms":[{"name":"FPH1","type":"related"},{"name":"Fph","type":"related"},{"name":"hyperpigmentation, familial progressive, 1","type":"related"},{"name":"melanosis diffusa congenita","type":"exact"},{"name":"melanosis universalis hereditaria","type":"exact"},{"name":"universal melanosis","type":"exact"}],"termid":"MONDO:0013648","xrefs":{"Monarch":{"xref_id":"0013648"}}}


id: MONDO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of prothrombin deficiency that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital prothrombin deficiency","termid":"MONDO:0013361"},{"relation_name":"is_a","term_name":"prothrombin deficiency","termid":"MONDO:0024307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired prothrombin deficiency","secondary_identifiers":["MESH:C538174","Orphanet:26348","NCIT:C131622","GARD:475","UMLS:C0392610","MEDGEN:140275","SCTID:4152002"],"synonyms":[{"name":"acquired factor II deficiency","type":"related"},{"name":"acquired hypoprothrombinemia","type":"exact"},{"name":"acquired prothrombin deficiency","type":"exact"},{"name":"hypoprothrombinemia, acquired","type":"related"}],"termid":"MONDO:0016990","xrefs":{"Monarch":{"xref_id":"0016990"}}}


id: PBO:0017755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, human RBM8A ortholog (predicted)","termid":"PBO:0017755"}


id: GO:0106150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of zearalenone, a mycotoxin produced by several Fusarium species, is most commonly found as a contaminant in stored grain and has chronic estrogenic effects on mammals.","definition_xrefs":["GOC:ach","PMID:20578001","PMID:16517624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"zearalenone biosynthetic process","termid":"GO:0106150"}


id: FYPO:0005373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to methyl methanesulfonate (MMS) is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to MMS.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal cell cycle regulation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal cell cycle regulation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle delay following methyl methanesulfonate exposure","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to MMS","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal mitotic cell cycle regulation in response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005373"}


id: PBO:0052642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 10","termid":"PBO:0052642"}


id: MONDO:0008077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurofibromatosis, type 1 (obsolete MONDO:0008077)","termid":"MONDO:0008077","xrefs":{"Monarch":{"xref_id":"0008077"}}}


id: GO:0180031
data:
  {"annotated_genes":["SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which a 2,2,7-trimethylguanosine cap structure is added to the 5' end of an snoRNA. The snoRNA capping includes the formation of 7-methyl-G caps found on all RNA polymerase II transcripts, followed by hypermethylation at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. Note that the pol III transcribed snoRNAs are also TMG capped.","definition_xrefs":["GOC:vw","PMID:15590684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016074","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"snoRNA 2,2,7-trimethylguanosine (TMG) capping","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snoRNA 2,2,7-trimethylguanosine (TMG) cap formation","type":"exact"},{"name":"snoRNA capping","type":"exact"}],"termid":"GO:0180031","terms_by_termid":{"GO:0106410":null}}


id: PBO:0059161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPRIP antisense RNA 1","termid":"PBO:0059161"}


id: MONDO:0017211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"},{"relation_name":"is_a","term_name":"panuveitis","termid":"MONDO:0017255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"infectious panuveitis","secondary_identifiers":["UMLS:C5230354","icd11.foundation:1709165622","Orphanet:279925","GARD:21068","MEDGEN:1684863"],"termid":"MONDO:0017211","xrefs":{"Monarch":{"xref_id":"0017211"}}}


id: GO:1901084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pyrrolizidine alkaloid.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrrolizidine alkaloid catabolic process (obsolete GO:1901084)","synonyms":[{"name":"pyrrolizidine alkaloid breakdown","type":"exact"},{"name":"pyrrolizidine alkaloid catabolism","type":"exact"},{"name":"pyrrolizidine alkaloid degradation","type":"exact"}],"termid":"GO:1901084"}


id: PBO:0063888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P pseudogene 1","termid":"PBO:0063888"}


id: PBO:0043263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 22","termid":"PBO:0043263"}


id: PBO:0034399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_formation_of","termid":"PBO:0034399"}


id: PBO:0086239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes primarily to the plasma membrane; also found at the nuclear envelope; long-lived protein that is asymmetrically retained in the plasma membrane of mother cells; the authentic, non-tagged protein is detected in mitochondria in a phosphorylated state; null mutation confers sensitivity to acetic acid","termid":"PBO:0086239"}


id: PBO:0075664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 5","termid":"PBO:0075664"}


id: GO:0043667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The wall surrounding a mature pollen grain; a multilayered structure consisting of a pectocellulosic intine surrounded by a sporopollenin-based exine, which itself contains two layers, the inner nexine and the outer sexine.","definition_xrefs":["PMID:15131249","GOC:fz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen wall","synonyms":[{"name":"microspore wall","type":"exact"}],"termid":"GO:0043667"}


id: GO:0052717
data:
  {"annotated_genes":["SJAG_00352","SJAG_04189"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73420,100900],"is_not":false,"summary":null,"term":"GO:0052717"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine-34 + H2O = inosine-34 + NH3, in a tRNA-Ala molecule.","definition_xrefs":["RHEA:43168","PMID:17875641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific adenosine deaminase activity","termid":"GO:0008251"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"tRNA-specific adenosine-34 deaminase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.4.33"],"synonyms":[{"name":"tRNA(Ala)-A34 deaminase activity","type":"exact"}],"termid":"GO:0052717","terms_by_termid":{"GO:0052717":null}}


id: PBO:0035706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035706"}


id: GO:0070215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an isoform of the MDM2 protein, a negative regulator of p53.","definition_xrefs":["GOC:nln","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MDM2 binding (obsolete GO:0070215)","synonyms":[{"name":"MDM2 binding","type":"exact"}],"termid":"GO:0070215"}


id: PBO:0038882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 8","termid":"PBO:0038882"}


id: GO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-specific expansion of T cell populations within a whole or part of an organism to reach to a total number of T cells which will then remain stable over time in the absence of an external stimulus.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"},{"relation_name":"part_of","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell homeostatic proliferation","synonyms":[{"name":"T lymphocyte homeostatic proliferation","type":"exact"},{"name":"T-cell homeostatic proliferation","type":"exact"},{"name":"T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"resting T cell proliferation","type":"exact"},{"name":"resting T-cell proliferation","type":"exact"}],"termid":"GO:0001777"}


id: PBO:0082468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin; Ca2+ binding protein that regulates Ca2+ independent processes (mitosis, bud growth, actin organization, endocytosis, etc.) and Ca2+ dependent processes (stress-activated pathways), targets include Nuf1p, Myo2p and calcineurin; binds to the Hog1p MAPK in response to hyperosmotic stress; potentiates membrane tubulation and constriction mediated by the Rvs161p-Rvs167p complex; human CALM1 or CALM2 functionally complement repression induced inviability","termid":"PBO:0082468"}


id: MONDO:0024685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukemia","termid":"MONDO:0004643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Philadelphia-positive myelogenous leukemia","secondary_identifiers":["MEDGEN:9731","UMLS:C0023476","NCIT:C3177"],"synonyms":[{"name":"Ph1-positive granulocytic leukaemia","type":"exact"},{"name":"Ph1-positive granulocytic leukemia","type":"exact"},{"name":"Ph1-positive myelocytic leukaemia","type":"exact"},{"name":"Ph1-positive myelocytic leukemia","type":"exact"},{"name":"Ph1-positive myelogenous leukaemia","type":"exact"},{"name":"Ph1-positive myelogenous leukemia","type":"exact"},{"name":"Ph1-positive myeloid leukaemia","type":"exact"},{"name":"Ph1-positive myeloid leukemia","type":"exact"},{"name":"Philadelphia-positive granulocytic leukaemia","type":"exact"},{"name":"Philadelphia-positive granulocytic leukemia","type":"exact"},{"name":"Philadelphia-positive myelocytic leukaemia","type":"exact"},{"name":"Philadelphia-positive myelocytic leukemia","type":"exact"},{"name":"Philadelphia-positive myelogenous leukemia","type":"exact"},{"name":"Philadelphia-positive myeloid leukaemia","type":"exact"},{"name":"Philadelphia-positive myeloid leukemia","type":"exact"}],"termid":"MONDO:0024685","xrefs":{"Monarch":{"xref_id":"0024685"}}}


id: MONDO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low compliance bladder","secondary_identifiers":["ICD9:596.52","DOID:12144","MEDGEN:635444","SCTID:9009001","UMLS:C0489967"],"synonyms":[{"name":"hyperactivity of bladder","type":"exact"},{"name":"hypertonic bladder","type":"exact"},{"name":"hypertonicity of bladder","type":"exact"},{"name":"low bladder compliance","type":"exact"}],"termid":"MONDO:0001446","xrefs":{"Monarch":{"xref_id":"0001446"}}}


id: PBO:0003382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide (predicted)","termid":"PBO:0003382"}


id: GO:1990018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Elongated process of a tanycyte, devoid of cytoplasmic extensions, that courses through the hypothalamic nuclei to form small endfoot processes that terminate either on blood vessels or at the pial surface of the brain. A tanycyte is a specialized elongated ventricular ependymal cell.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao1749953771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tail portion of tanycyte","synonyms":[{"name":"tail portion","type":"broad"}],"termid":"GO:1990018"}


id: GO:1990193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in cobalamin (vitamin B12) transport through the plasma membrane. In E. coli, the complex is a tetramer and consists of the cytoplasmic ATPase BtuD homodimer together with the transmembrane BtuC homodimer.","definition_xrefs":["GOC:bhm","PMID:22569249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"BtuCD complex","synonyms":[{"name":"BtuC-BtuD complex","type":"exact"},{"name":"cobalamin transport complex, core subunit","type":"exact"},{"name":"vitamin B12 transport complex, core subunit","type":"exact"}],"termid":"GO:1990193"}


id: PBO:0000315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid phosphatase (predicted)","termid":"PBO:0000315"}


id: PBO:0090851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex WD repeat protein Elp2","termid":"PBO:0090851"}


id: PATO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light brown","termid":"PATO:0001246"}


id: GO:1901666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of NAD+ ADP-ribosyltransferase activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of NAD+ ADP-ribosyltransferase activity","synonyms":[{"name":"activation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"activation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"activation of NAD+ ADP-ribosyltransferase activity","type":"narrow"},{"name":"activation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"activation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"activation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"activation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"activation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"positive regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"positive regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"positive regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"positive regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"positive regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"positive regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"positive regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"up regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"up regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"up regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"up regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"up regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"up regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"up regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"up regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"up-regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"up-regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"up-regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"up-regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"up-regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"up-regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"up-regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"up-regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"upregulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"upregulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"upregulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"upregulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"upregulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"upregulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"upregulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"upregulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"}],"termid":"GO:1901666"}


id: PBO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 10","termid":"PBO:0071469"}


id: PBO:0017902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase Fol1 (predicted)","termid":"PBO:0017902"}


id: PBO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 1","termid":"PBO:0072635"}


id: GO:0070151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling histidine to histidyl-tRNA in a mitochondrion, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histidyl-tRNA aminoacylation","termid":"GO:0006427"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0140053","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial histidyl-tRNA aminoacylation","termid":"GO:0070151"}


id: MONDO:0858959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system benign neoplasm that is characterized by the presence of oligodendroglioma-like components, may also contain astrocytic components and is associated with seizures and in many cases refractory epilepsy.","definition_xrefs":["DOID:0081305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphous low grade neuroepithelial tumor of the young","secondary_identifiers":["UMLS:C5556330","MEDGEN:1792771"],"termid":"MONDO:0858959","xrefs":{"Monarch":{"xref_id":"0858959"}}}


id: PR:000049982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-412 and Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412/Ser-423, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:21561865","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos(T412,S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA repair protein rad9 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"rad9/Phos(T412,S423)","type":"exact"}],"termid":"PR:000049982"}


id: PR:O42996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C27B12.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.05","synonyms":[{"name":"Spom972h-SPBC27B12.05","type":"exact"}],"termid":"PR:O42996"}


id: GO:1904213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of iodide transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:20392814","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"negative regulation of anion transmembrane transport","termid":"GO:1903960"},{"relation_name":"is_a","term_name":"negative regulation of iodide transport","termid":"GO:1904202"},{"relation_name":"is_a","term_name":"regulation of iodide transmembrane transport","termid":"GO:1904212"},{"relation_name":"negatively_regulates","term_name":"iodide transmembrane transport","termid":"GO:1904200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of iodide transmembrane transport","synonyms":[{"name":"down regulation of iodide transmembrane transport","type":"exact"},{"name":"down-regulation of iodide transmembrane transport","type":"exact"},{"name":"downregulation of iodide transmembrane transport","type":"exact"},{"name":"inhibition of iodide transmembrane transport","type":"narrow"}],"termid":"GO:1904213"}


id: GO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH2 group of donors, with a quinone or similar compound as acceptor (obsolete GO:0052585)","termid":"GO:0052585"}


id: PBO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Iec5","termid":"PBO:0001994"}


id: FYPO:0003958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal diacylglycerol O-acyltransferase activity","synonyms":[{"name":"abnormal DGAT activity","type":"exact"},{"name":"abnormal diacylglycerol acyltransferase activity","type":"broad"}],"termid":"FYPO:0003958"}


id: FYPO:0001224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and one septum.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete binucleate monoseptate cell (obsolete FYPO:0001224)","synonyms":[{"name":"binucleate monoseptate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001224"}


id: GO:0017025
data:
  {"annotated_genes":["SJAG_03120","SJAG_00692","SJAG_02458","SJAG_03900","SJAG_02174","SJAG_01523","SJAG_03095","SJAG_00650"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57855,65977,70145,70385,71816,75315,76598,76973],"is_not":false,"summary":null,"term":"GO:0017025"}]},"cv_name":"molecular_function","definition":"Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs).","definition_xrefs":["PMID:1509519","GOC:jl","GOC:txnOH","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00650":null,"SJAG_00692":null,"SJAG_01523":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TBP-class protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TATA-binding protein binding","type":"narrow"},{"name":"TBP binding","type":"narrow"},{"name":"TBP-related factor (TRF) protein binding","type":"narrow"}],"termid":"GO:0017025","terms_by_termid":{"GO:0017025":null}}


id: PBO:0088695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-T, Gpi16","termid":"PBO:0088695"}


id: FYPO:0003707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing valinomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on valinomycin","synonyms":[{"name":"normal cell population growth in presence of valinomycin","type":"exact"},{"name":"normal cell population growth on valinomycin","type":"exact"},{"name":"normal cellular response to valinomycin","type":"related"},{"name":"normal vegetative cell population growth on valinomycin","type":"exact"}],"termid":"FYPO:0003707"}


id: PBO:0084440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); encoded within the complex locus MAL6","termid":"PBO:0084440"}


id: PBO:0043949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta B1","termid":"PBO:0043949"}


id: GO:0098533
data:
  {"annotated_genes":["SJAG_01471","SJAG_01913","SJAG_01817","SJAG_00516","SJAG_04015","SJAG_03406","SJAG_02023","SJAG_01447","SJAG_01397","SJAG_04955","SJAG_05294","SJAG_00136","SJAG_02782","SJAG_03962","SJAG_02470","SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033176"},{"annotations":[91808,103696,99730,89909,61623,95592,95411],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[70791,98698,96378,60333,109672,118535,87781,102459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A transmembrane protein complex that functions in ATPase dependent active transport across a membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03962":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATPase dependent transmembrane transport complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098533","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0033176":null}}


id: PBO:0024850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf2","termid":"PBO:0024850"}


id: GO:0060885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the semicircular canal by removing cells in the fusion plate, forming the loops of the canals.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"is_a","term_name":"clearance of cells from fusion plate","termid":"GO:0060884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate by apoptotic process","synonyms":[{"name":"clearance of cells from fusion plate by apoptosis","type":"narrow"}],"termid":"GO:0060885"}


id: MONDO:0008000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 1","secondary_identifiers":["SCTID:37796009","UMLS:C3887485","MEDGEN:854348","ICD9:346.80","OMIM:157300","ICD9:346.90"],"synonyms":[{"name":"Mgau","type":"related"},{"name":"Mgr1","type":"related"},{"name":"migraine","type":"related"},{"name":"migraine with or without aura, susceptibility to, 1","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 1","type":"exact"},{"name":"migraine without aura, susceptibility to","type":"exact"},{"name":"migraine, resistance to","type":"exact"},{"name":"migraine, susceptibility to","type":"exact"}],"termid":"MONDO:0008000","xrefs":{"Monarch":{"xref_id":"0008000"}}}


id: FYPO:0006663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the nucleus is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enlarged nucleus","termid":"FYPO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"elongated nucleus","synonyms":[{"name":"elongated nuclei","type":"exact"},{"name":"long nucleus","type":"exact"}],"termid":"FYPO:0006663"}


id: PBO:0017876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase Rhp1602 (predicted)","termid":"PBO:0017876"}


id: PBO:0065545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 receptor 2","termid":"PBO:0065545"}


id: GO:0006280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which genetic material undergoes a detectable and heritable structural change. There are three categories of mutation: genome mutations, involving addition or subtraction of one or more whole chromosomes; chromosome mutations, which alter the structure of chromosomes; and gene mutations, where the structure of a gene is altered at the molecular level.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete mutagenesis (obsolete GO:0006280)","synonyms":[{"name":"mutagenesis","type":"exact"}],"termid":"GO:0006280"}


id: MONDO:0014702
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84772,84773],"is_not":false,"summary":null,"term":"MONDO:0014702"}]},"cv_name":"mondo","definition":"Any autosomal recessive complex spastic paraplegia in which the cause of the disease is a mutation in the ALDH18A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"P5CS deficiency","termid":"MONDO:0100126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0004736"],"is_obsolete":false,"name":"autosomal recessive complex spastic paraplegia type 9B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17770","OMIM:616586","UMLS:C5568980","Orphanet:447760","MEDGEN:1800403","DOID:0110825"],"synonyms":[{"name":"ALDH18A1 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"AR-SPG9B","type":"exact"},{"name":"SPG9B","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in ALDH18A1","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia type 9B","type":"exact"},{"name":"autosomal recessive spastic paraplegia 9B","type":"exact"},{"name":"hereditary spastic paraplegia 9B","type":"related"},{"name":"hereditary spastic paraplegia type 9B","type":"exact"},{"name":"spastic paraplegia 9B, autosomal recessive","type":"related"}],"termid":"MONDO:0014702","terms_by_termid":{"MONDO:0014702":null},"xrefs":{"Monarch":{"xref_id":"0014702"}}}


id: PBO:0058173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4468","termid":"PBO:0058173"}


id: PR:O14255
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mannosyl-oligosaccharide glucosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10412:SF1","PRO:DNx","OMA:SCHPO01350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyl-oligosaccharide glucosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.09","secondary_identifiers":["UniProtKB:O14255"],"synonyms":[{"name":"Spom972h-MOGS","type":"exact"},{"name":"processing A-glucosidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14255"}


id: PBO:0109047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex MRG family subunit Alp13/Eaf3","termid":"PBO:0109047"}


id: MONDO:0011939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spondyloenchondrodysplasia with immune dysregulation","secondary_identifiers":["MEDGEN:375009","MESH:C564307","ICD9:759.89","GARD:4978","ICD9:756.9","NANDO:2200744","MESH:C535782","OMIM:271550","SCTID:254079002","OMIM:607944","SCTID:703523004","Orphanet:1855","Orphanet:50816","UMLS:C1842763"],"synonyms":[{"name":"Roifman Immunoskeletal syndrome","type":"exact"},{"name":"SEM","type":"related"},{"name":"SPENCD","type":"exact"},{"name":"SPENCDI","type":"exact"},{"name":"Spondyloenchondrodysplasia with immune dysregulation","type":"exact"},{"name":"combined immunodeficiency with autoimmunity and spondylometaphyseal dysplasia","type":"exact"},{"name":"spondyloenchondrodysplasia","type":"exact"},{"name":"spondyloenchondrodysplasia with immune dysregulation","type":"exact"},{"name":"spondyloenchondromatosis","type":"exact"},{"name":"spondylometaphyseal dysplasia with combined immunodeficiency","type":"exact"},{"name":"spondylometaphyseal dysplasia with enchondromatous changes","type":"exact"}],"termid":"MONDO:0011939","xrefs":{"Monarch":{"xref_id":"0011939"}}}


id: PBO:0039845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP11B divergent transcript","termid":"PBO:0039845"}


id: FYPO:0004882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytokinesis takes place before the mitotic spindle has disassembled. As a result, the contractile ring cuts through the spindle.","definition_xrefs":["PomBase:mah","PomBase:al","PMID:25963819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"cytokinesis in presence of assembled mitotic spindle","synonyms":[{"name":"cytokinesis in presence of assembled mitotic spindle during vegetative growth","type":"exact"},{"name":"cytokinesis in presence of assembled spindle during mitotic cell cycle","type":"exact"},{"name":"mitotic spindle cut by actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0004882"}


id: GO:0031993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Absorbing energy from one or more photons and transferring their energy to another molecule, usually a protein, within the cell.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy transducer activity","termid":"GO:0031992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"light transducer activity","termid":"GO:0031993"}


id: FYPO:0005693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from one or more microtubule organizing centers (MTOCs) is does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule nucleation","synonyms":[{"name":"abolished cytoplasmic microtubule nucleation during mitotic cell cycle","type":"related"},{"name":"abolished cytoplasmic microtubule nucleation during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubule nucleation abolished","type":"exact"}],"termid":"FYPO:0005693"}


id: GO:2000883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of starch catabolic process","termid":"GO:2000881"},{"relation_name":"is_a","term_name":"positive regulation of starch metabolic process","termid":"GO:2000906"},{"relation_name":"positively_regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of starch catabolic process","synonyms":[{"name":"positive regulation of starch breakdown","type":"exact"},{"name":"positive regulation of starch catabolism","type":"exact"},{"name":"positive regulation of starch degradation","type":"exact"}],"termid":"GO:2000883"}


id: GO:1901209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heart looping.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart looping","termid":"GO:1901207"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"heart looping","termid":"GO:0001947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart looping","synonyms":[{"name":"activation of cardiac looping","type":"exact"},{"name":"activation of heart looping","type":"narrow"},{"name":"positive regulation of cardiac looping","type":"exact"},{"name":"up regulation of cardiac looping","type":"exact"},{"name":"up regulation of heart looping","type":"exact"},{"name":"up-regulation of cardiac looping","type":"exact"},{"name":"up-regulation of heart looping","type":"exact"},{"name":"upregulation of cardiac looping","type":"exact"},{"name":"upregulation of heart looping","type":"exact"}],"termid":"GO:1901209"}


id: GO:0009932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth that occurs specifically at the tip of a cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell tip growth","termid":"GO:0009932"}


id: PBO:0030910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_subcellular_component_during_vegetative_growth","termid":"PBO:0030910"}


id: GO:1990383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of biotin.","definition_xrefs":["PMID:12557275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotin starvation","termid":"GO:1990383"}


id: PBO:0086222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap190p; SAP185 has a paralog, SAP190, that arose from the whole genome duplication","termid":"PBO:0086222"}


id: PBO:0044044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 1","termid":"PBO:0044044"}


id: MONDO:0014585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, low amplitude of the miniature endplate potential and current, and early-onset muscle weakness that has material basis in compound heterozygous mutation in the CHRND gene on chromosome 2q37.","definition_xrefs":["DOID:0110664","PMID:16916845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 3C","secondary_identifiers":["GARD:16086","OMIM:616323","MEDGEN:903088","UMLS:C4225370"],"synonyms":[{"name":"CMS3C","type":"related"},{"name":"congenital myasthenic syndrome 3C associated with acetylcholine receptor deficiency","type":"exact"},{"name":"congenital myasthenic syndrome type 3C","type":"exact"},{"name":"myasthenic syndrome, congenital, 3C, associated with acetylcholine receptor deficiency","type":"related"}],"termid":"MONDO:0014585","xrefs":{"Monarch":{"xref_id":"0014585"}}}


id: PBO:0053392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 320","termid":"PBO:0053392"}


id: MONDO:0007789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophia musculorum vera","secondary_identifiers":["UMLS:C1840361","OMIM:145800","MESH:C564152","MEDGEN:374451"],"synonyms":[{"name":"hypertrophia musculorum vera","type":"exact"}],"termid":"MONDO:0007789","xrefs":{"Monarch":{"xref_id":"0007789"}}}


id: PBO:0050895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IER5L antisense RNA 1","termid":"PBO:0050895"}


id: GO:0000221
data:
  {"annotated_genes":["SJAG_04015","SJAG_01447","SJAG_04955","SJAG_00212","SJAG_01817","SJAG_01397","SJAG_01471","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60333,70791,87781,96378,98698,102459,109672,118535],"is_not":false,"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"The V1 domain of a proton-transporting V-type ATPase found in the vacuolar membrane.","definition_xrefs":["GOC:mah","PMID:16449553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V1 domain","termid":"GO:0033180"},{"relation_name":"part_of","term_name":"vacuolar proton-transporting V-type ATPase complex","termid":"GO:0016471"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen ion-transporting ATPase V1 domain","type":"exact"}],"termid":"GO:0000221","terms_by_termid":{"GO:0000221":null}}


id: GO:0035271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the ring gland over time, from its formation to a mature structure. The ring gland is a neuroendocrine organ found in higher Dipterans, which is composed of the prothoracic gland, the corpus allatum, and the corpora cardiacum. The ring gland is the site of production and release of ecdysteroids and juvenile hormones.","definition_xrefs":["GOC:bf","PMID:11223816","PMID:9584098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ring gland development","termid":"GO:0035271"}


id: PBO:0090965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1","termid":"PBO:0090965"}


id: PBO:0063209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(rC) binding protein 3","termid":"PBO:0063209"}


id: MONDO:0005503
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id: GO:1900284
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id: _global:assayed_substrate
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a catalytic activity phenotype and a substrate, such as a gene product, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_substrate","termid":"_global:assayed_substrate"}


id: FYECO:0000329
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which formamide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ formamide","termid":"FYECO:0000329"}


id: PBO:0090104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo84","termid":"PBO:0090104"}


id: PBO:0078689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-2","termid":"PBO:0078689"}


id: PR:Q9UTK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup98-Nup96 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23198:SF0","PRO:DNx","OMA:SCHPO01336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup189 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.05","secondary_identifiers":["UniProtKB:Q9UTK4"],"synonyms":[{"name":"Spom972h-NUP98","type":"exact"},{"name":"nuclear pore protein nup189 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK4"}


id: MONDO:0009726
data:
  {"annotated_genes":["SJAG_04969","SJAG_04290","SJAG_04541","SJAG_03151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[85184,85183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03151":null,"SJAG_04290":null,"SJAG_04541":null,"SJAG_04969":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"proteosome-associated autoinflammatory syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:324977","MEDGEN:376827","SCTID:702449004","Orphanet:324999","Orphanet:2615","OMIMPS:256040","DOID:0050553","UMLS:C1850568","GARD:13824","MESH:C538334","NANDO:2200435","DOID:0060913","Orphanet:325004","NANDO:1200867","ICD9:709.8"],"synonyms":[{"name":"ALDD","type":"exact"},{"name":"ALDD syndrome","type":"exact"},{"name":"CANDLE syndrome","type":"exact"},{"name":"JMP syndrome","type":"exact"},{"name":"Joint contractures - muscle atrophy - microcytic anaemia - panniculitis-induced lipodystrophy","type":"exact"},{"name":"Joint contractures - muscle atrophy - microcytic anemia - panniculitis-induced lipodystrophy","type":"exact"},{"name":"Joint contractures, muscular atrophy, microcytic Anemia, and panniculitis-induced lipodystrophy","type":"exact"},{"name":"Joint contractures-muscular atrophy-microcytic anemia-panniculitis-associated lipodystrophy syndrome","type":"exact"},{"name":"NNS","type":"exact"},{"name":"Nakajo Nishimura syndrome","type":"exact"},{"name":"Nakajo syndrome","type":"exact"},{"name":"Nakajo-Nishimura syndrome","type":"exact"},{"name":"PRAAS","type":"exact"},{"name":"amyotrophy fat tissue anomaly","type":"related"},{"name":"amyotrophy-fat tissue anomaly syndrome","type":"related"},{"name":"autoinflammation, lipodystrophy, and dermatosis syndrome","type":"exact"},{"name":"autoinflammation-lipodystrophy-dermatosis syndrome","type":"exact"},{"name":"chronic atypical neutrophilic dermatosis with lipodystrophy and elevated temperature","type":"exact"},{"name":"chronic atypical neutrophilic dermatosis with lipodystrophy and elevated temperature syndrome","type":"exact"},{"name":"chronic atypical neutrophilic dermatosis-lipodystrophy-elevated temperature syndrome","type":"exact"},{"name":"joint contractures, muscular atrophy, microcytic anemia, and panniculitis-induced lipodystrophy","type":"exact"},{"name":"nodular erythema digital changes","type":"related"},{"name":"proteasome disability syndrome","type":"exact"},{"name":"proteasome-associated autoinflammatory syndrome","type":"exact"},{"name":"secondary hypertrophic osteoperiostosis with pernio","type":"exact"}],"termid":"MONDO:0009726","terms_by_termid":{"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0009726"}}}


id: GO:0047539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 2-deoxy-alpha-D-glucoside = 2-deoxy-D-glucose + an alcohol.","definition_xrefs":["EC:3.2.1.112","MetaCyc:2-DEOXYGLUCOSIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-deoxyglucosidase activity","secondary_identifiers":["RHEA:15317"],"synonyms":[{"name":"2-deoxy-alpha-D-glucosidase activity","type":"related"},{"name":"2-deoxy-alpha-D-glucoside deoxyglucohydrolase activity","type":"related"},{"name":"2-deoxy-alpha-glucosidase activity","type":"related"}],"termid":"GO:0047539"}


id: MONDO:0700151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain or spinal cord tumor arising from glial cells that occurs in dogs.","definition_xrefs":["NCIT:C129297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine glioma","termid":"MONDO:0700151","xrefs":{"Monarch":{"xref_id":"0700151"}}}


id: GO:0032527
data:
  {"annotated_genes":["SJAG_00530","SJAG_03345","SJAG_03907"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72752],"is_not":false,"summary":null,"term":"GO:0032527"},{"annotations":[78791,75240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_03345":null,"SJAG_03907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein exit from endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein exit from ER","type":"exact"},{"name":"protein export from ER","type":"exact"},{"name":"protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0032527","terms_by_termid":{"GO:0030970":null,"GO:0032527":null}}


id: PBO:0086893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0086893"}


id: SO:0000696
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short oligonucleotide sequence, of length on the order of 10's of bases; either single or double stranded.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Oligonucleotide"],"synonyms":[{"name":"oligonucleotide","type":"exact"}],"termid":"SO:0000696"}


id: PBO:0039352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1 pseudogene 2","termid":"PBO:0039352"}


id: PBO:0073029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secernin 2","termid":"PBO:0073029"}


id: MONDO:0044704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngeal squamous cell carcinoma","termid":"MONDO:0000536"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"oropharynx squamous cell carcinoma","secondary_identifiers":["Orphanet:500478","NCIT:C8181","GARD:17928","UMLS:C0280313","icd11.foundation:839740136","MEDGEN:76094","ONCOTREE:OPHSC"],"synonyms":[{"name":"epidermoid carcinoma of oropharynx","type":"exact"},{"name":"epidermoid carcinoma of the oropharynx","type":"exact"},{"name":"oropharyngeal epidermoid carcinoma","type":"exact"},{"name":"oropharyngeal squamous cell carcinoma","type":"exact"},{"name":"oropharyngeal throat squamous cell cancer","type":"exact"},{"name":"squamous cell carcinoma of oropharynx","type":"exact"},{"name":"squamous cell carcinoma of the oropharynx","type":"related"}],"termid":"MONDO:0044704","xrefs":{"Monarch":{"xref_id":"0044704"}}}


id: PBO:0073256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN7 divergent transcript","termid":"PBO:0073256"}


id: PBO:0056827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase-glucoamylase","termid":"PBO:0056827"}


id: GO:0004363
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70102],"is_not":false,"summary":null,"term":"GO:0004363"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gamma-glutamyl-L-cysteine + ATP + glycine = ADP + glutathione + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.3","RHEA:13557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"non-ribosomal peptide synthetase activity","termid":"GO:1904091"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"glutathione synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00497","MetaCyc:GLUTATHIONE-SYN-RXN","Reactome:R-HSA-174394","Reactome:R-HSA-5602901"],"synonyms":[{"name":"GSH synthetase activity","type":"related"},{"name":"gamma-L-glutamyl-L-cysteine:glycine ligase (ADP-forming)","type":"related"},{"name":"glutathione synthetase activity","type":"related"}],"termid":"GO:0004363","terms_by_termid":{"GO:0004363":null}}


id: PBO:0082859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPPs are multimeric guanine nucleotide-exchange factors for GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); mutation leads to defects in endocytic recycling, block in sporulation/meiosis; mutations in human homolog TRAPPC2 cause spondyloepiphyseal dysplasia tarda, TRAPPC2 can complement yeast null mutant","termid":"PBO:0082859"}


id: MONDO:0033352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"neuropathy, congenital hypomelinating","secondary_identifiers":["UMLS:C0393818","MEDGEN:97965","OMIMPS:605253"],"synonyms":[{"name":"CHN","type":"exact"}],"termid":"MONDO:0033352","xrefs":{"Monarch":{"xref_id":"0033352"}}}


id: MOD:00303
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts seven L-histidinine residues and a four-copper one-sulfur one-hydroxide cluster to heptakis-L-histidino tetracopper mu4-sulfide hydroxide.","definition_xrefs":["PubMed:11024061","RESID:AA0298","PubMed:11041839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","synonyms":[{"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","type":"exact"},{"name":"mu4-sulfido bis(bis-N1'-histidino copper)(N1'-histidino-N3'-histidino copper)(N3'-histidino hydroxide copper)","type":"exact"},{"name":"nitrous oxide reductase nosZ CuZ cluster","type":"exact"},{"name":"pentakis-L-N1'-histidino-bis-L-N3'-histidino tetracopper sulfide hydroxide","type":"exact"}],"termid":"MOD:00303"}


id: PBO:0081623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 552","termid":"PBO:0081623"}


id: MONDO:0004147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologically malignant thymoma that is entirely confined within the capsule.","definition_xrefs":["NCIT:C9080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"noninvasive malignant thymoma","secondary_identifiers":["DOID:7214","MEDGEN:78893","UMLS:C0278847"],"synonyms":[{"name":"malignant thymoma, noninvasive","type":"exact"},{"name":"thymoma malignant noninvasive","type":"exact"}],"termid":"MONDO:0004147","xrefs":{"Monarch":{"xref_id":"0004147"}}}


id: GO:0075324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oomycete sporangium development, a process that leads to the formation of oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiate, through specialized cleavage vesicles, into between 10 and 30 zoospores, which is laterally flagellated.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"is_a","term_name":"negative regulation of sporangium development","termid":"GO:0075312"},{"relation_name":"is_a","term_name":"regulation of oomycete sporangium development","termid":"GO:0075322"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"oomycete sporangium development","termid":"GO:0075321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oomycete sporangium development","termid":"GO:0075324"}


id: GO:0061592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipid scrambling process that results in the appearance of phosphatidylserine on the surface of osteoblasts, and contributes to bone mineralization.","definition_xrefs":["PMID:22936354","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane phospholipid scrambling","termid":"GO:0017121"},{"relation_name":"part_of","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"phosphatidylserine exposure on osteoblast involved in bone mineralization","termid":"GO:0061592"}


id: SO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An SNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNV_artifact","synonyms":[{"name":"SNV artifact","type":"exact"}],"termid":"SO:0002178"}


id: PBO:0040592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACH1 intronic transcript 2","termid":"PBO:0040592"}


id: GO:1905818
data:
  {"annotated_genes":["SJAG_02169","SJAG_01837","SJAG_01805","SJAG_00145","SJAG_02380","SJAG_04699","SJAG_03681","SJAG_03048","SJAG_03350","SJAG_01515","SJAG_01330","SJAG_01679","SJAG_03351","SJAG_00460","SJAG_02451","SJAG_04999","SJAG_04968","SJAG_01297","SJAG_04573","SJAG_01082","SJAG_00883","SJAG_04884","SJAG_00666","SJAG_03327","SJAG_02336","SJAG_05236","SJAG_04259","SJAG_03353","SJAG_02498","SJAG_03126","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107032,113584,114072,111757,90477,99376,108054,115709,103681],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[106115,114302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116477,75000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[106117,109708,101586,99220,115363,114305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[98479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[103068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[93959],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[113589],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[94918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[116484],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[99926,102169,101897,111173,93563,97472,114576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[116486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[99391,99396,96369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"},{"annotations":[101124],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromosome separation.","definition_xrefs":["GO_REF:0000058","PMID:21795393","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome segregation","termid":"GO:0051983"},{"relation_name":"regulates","term_name":"chromosome separation","termid":"GO:0051304"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of chromosome separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromatid release","type":"related"},{"name":"regulation of rDNA separation","type":"narrow"}],"termid":"GO:1905818","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0045842":null,"GO:0090267":null,"GO:0140499":null,"GO:1901970":null,"GO:1902103":null,"GO:1902426":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905824":null,"GO:2000816":null}}


id: PBO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-copy suppressor of Chk1","termid":"PBO:0001098"}


id: MONDO:0000266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A aspergillosis that involves the lung.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"},{"relation_name":"is_a","term_name":"fungal lung infectious disease","termid":"MONDO:0005766"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary aspergilloma","secondary_identifiers":["DOID:0050153","MESH:D055732","MEDGEN:390019","UMLS:C2350529","EFO:1001834"],"synonyms":[{"name":"lung aspergillosis","type":"exact"}],"termid":"MONDO:0000266","xrefs":{"Monarch":{"xref_id":"0000266"}}}


id: PBO:0064659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4A","termid":"PBO:0064659"}


id: GO:0036040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the polyphenol, curcumin.","definition_xrefs":["PMID:21467222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"curcumin metabolic process","termid":"GO:0036039"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"curcumin catabolic process","synonyms":[{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione breakdown","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione catabolic process","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione catabolism","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione degradation","type":"exact"},{"name":"curcumin breakdown","type":"exact"},{"name":"curcumin catabolism","type":"exact"},{"name":"curcumin degradation","type":"exact"},{"name":"diferuloylmethane breakdown","type":"exact"},{"name":"diferuloylmethane catabolic process","type":"exact"},{"name":"diferuloylmethane catabolism","type":"exact"},{"name":"diferuloylmethane degradation","type":"exact"},{"name":"turmeric yellow breakdown","type":"exact"},{"name":"turmeric yellow catabolic process","type":"exact"},{"name":"turmeric yellow catabolism","type":"exact"},{"name":"turmeric yellow degradation","type":"exact"}],"termid":"GO:0036040"}


id: MONDO:0008033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant limb-girdle muscular dystrophy type 1B (LGMD1B) is a subtype of autosomal dominant limb girdle muscular dystrophy characterized by a variable age of onset of progressive shoulder and hip girdle weakness, with inferior limbs usually being affected prior to upper limbs, and mild joint contractures. LGMD1B is also associated with cardiac dysrhythmias, including atrioventricular conduction blocks, and late-onset dilated cardiomyopathy, that may lead to sudden death.","definition_xrefs":["Orphanet:264"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1B (obsolete MONDO:0008033)","termid":"MONDO:0008033","xrefs":{"Monarch":{"xref_id":"0008033"}}}


id: PBO:0029821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_cells,_abnormal_cell_shape_(obsolete_FYPO:0002416)","termid":"PBO:0029821"}


id: MONDO:0014145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the GDF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 17","secondary_identifiers":["OMIM:615360","MEDGEN:811616","GARD:15950","ICD10CM:H35.5","UMLS:C3715164","DOID:0110217"],"synonyms":[{"name":"GDF6 Leber congenital amaurosis","type":"exact"},{"name":"LCA17","type":"exact"},{"name":"Leber congenital amaurosis 17","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in GDF6","type":"exact"},{"name":"Leber congenital amaurosis type 17","type":"exact"}],"termid":"MONDO:0014145","xrefs":{"Monarch":{"xref_id":"0014145"}}}


id: GO:0050154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + guanidinoethyl methyl phosphate = N'-phosphoguanidinoethyl methylphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:17553","EC:2.7.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"opheline kinase activity","secondary_identifiers":["KEGG_REACTION:R04388","MetaCyc:OPHELINE-KINASE-RXN"],"synonyms":[{"name":"ATP:guanidinoethyl-methyl-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0050154"}


id: PBO:0070300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 6","termid":"PBO:0070300"}


id: GO:0010726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:tb","GOC:dph","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"positive regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010726"}


id: GO:0102337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracosanoyl-CoA(4-) + malonyl-CoA(5-) + H+ = 3-oxohexacosanoyl-CoA + carbon dioxide + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-cerotoyl-CoA synthase activity (obsolete GO:0102337)","termid":"GO:0102337"}


id: GO:0070107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070107"}


id: MONDO:0016471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pachyonychia congenita (PC) is a rare genodermatosis predominantly featuring painful palmoplantar keratoderma, thickened nails, cysts and whitish oral mucosa.","definition_xrefs":["Orphanet:2309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita","secondary_identifiers":["MESH:D053549","DOID:0050449","UMLS:C0265334","NCIT:C84986","NORD:1542","icd11.foundation:1446983705","MEDGEN:78556","OMIMPS:167200","GARD:10753"],"synonyms":[{"name":"Jackson-Lawler type pachyonychia congenita","type":"exact"},{"name":"Jadassohn-Lewandowsky syndrome","type":"exact"},{"name":"PC","type":"exact"},{"name":"congenital pachyonychia","type":"related"},{"name":"pachyonychia congenita syndrome","type":"related"},{"name":"pachyonychia congenita type 1","type":"narrow"},{"name":"pachyonychia congenita, Jadassohn-Lewandowsky type","type":"exact"}],"termid":"MONDO:0016471","xrefs":{"Monarch":{"xref_id":"0016471"}}}


id: GO:0034190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apolipoprotein receptor.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein receptor binding","termid":"GO:0034190"}


id: GO:1903190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyoxal.","definition_xrefs":["PMID:22523093","GOC:bf","GOC:PARL","GO_REF:0000068","GOC:TermGenie","PMID:23651081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"glyoxal metabolic process","termid":"GO:1903189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyoxal catabolic process","synonyms":[{"name":"glyoxal breakdown","type":"exact"},{"name":"glyoxal catabolism","type":"exact"},{"name":"glyoxal degradation","type":"exact"}],"termid":"GO:1903190"}


id: PBO:0040611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAIAP2 divergent transcript","termid":"PBO:0040611"}


id: PBO:0089385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic leucine-tRNA ligase Lrs1","termid":"PBO:0089385"}


id: GO:0106219
data:
  {"annotated_genes":["SJAG_02853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103226],"is_not":false,"summary":null,"term":"GO:0106219"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of zinc.","definition_xrefs":["GOC:vw","PMID:31239353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"zinc ion sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106219","terms_by_termid":{"GO:0106219":null}}


id: PBO:0055998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM1 homolog, mRNA degradation associated pseudogene 1","termid":"PBO:0055998"}


id: PR:O13867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil phosphoribosyltransferase Upp that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.01c","secondary_identifiers":["UniProtKB:O13867"],"synonyms":[{"name":"Spom972h-upp","type":"exact"},{"name":"UMP pyrophosphorylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13867"}


id: MONDO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paratesticular adenocarcinoma","secondary_identifiers":["GARD:21550","MEDGEN:1678623","UMLS:C5190800","Orphanet:363478"],"synonyms":[{"name":"adenocarcinoma of paratestis","type":"exact"},{"name":"adenocarcinoma of the paratestis","type":"exact"}],"termid":"MONDO:0018192","xrefs":{"Monarch":{"xref_id":"0018192"}}}


id: MONDO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign nodular lesion protruding above the surface of the endometrium. It is composed of a fibrous stroma that contains thick-walled blood vessels and dilated endometrial glands. Polypectomy is the treatment of choice. Only few cases with recurrence have been reported.","definition_xrefs":["NCIT:C6433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"uterine polyp","termid":"MONDO:0004701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial polyp","secondary_identifiers":["MEDGEN:312370","UMLS:C1704273","EFO:1000237"],"synonyms":[{"name":"endometrial polyp","type":"exact"},{"name":"endometrial stromal polyp","type":"exact"},{"name":"endometrium polyp","type":"exact"},{"name":"polyp of endometrium","type":"exact"},{"name":"polyp of the endometrium","type":"exact"},{"name":"polyp, endometrial stromal, benign","type":"exact"}],"termid":"MONDO:0006195","xrefs":{"Monarch":{"xref_id":"0006195"}}}


id: PBO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-11-1 (pseudogene)","termid":"PBO:0051251"}


id: PBO:0000632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine N5 monooxygenase (predicted)","termid":"PBO:0000632"}


id: PBO:0027620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_urea_nitrogen_source","termid":"PBO:0027620"}


id: PR:P05752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps601 gene.","definition_xrefs":["UniProtKB:P05752","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.07c","synonyms":[{"name":"Spom972h-rps601","type":"exact"}],"termid":"PR:P05752"}


id: GO:0120235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of posttranslational protein translocation through the ER membrane.","definition_xrefs":["GOC:rn","PMID:32513868","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"post-translational protein targeting to membrane, translocation","termid":"GO:0031204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of post-translational protein targeting to membrane, translocation","synonyms":[{"name":"regulation of N-terminal signal peptide-independent translocation into the ER","type":"narrow"},{"name":"regulation of SRP-independent endoplasmic reticulum protein-membrane targeting, translocation","type":"narrow"},{"name":"regulation of posttranslational endoplasmic reticulum membrane protein translocation","type":"exact"},{"name":"regulation of posttranslational protein targeting to membrane, translocation","type":"exact"}],"termid":"GO:0120235"}


id: MONDO:0003060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the biliary tree","direct_ancestors":[{"relation_name":"is_a","term_name":"liver cancer","termid":"MONDO:0002691"},{"relation_name":"is_a","term_name":"biliary tract neoplasm","termid":"MONDO:0005304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"biliary tract cancer","secondary_identifiers":["UMLS:C0750952","DOID:4607","ICD9:156.9","MEDGEN:155474","GARD:5924","SCTID:126853008"],"synonyms":[{"name":"biliary tree cancer","type":"exact"},{"name":"cancer of biliary tree","type":"exact"},{"name":"malignant biliary tree neoplasm","type":"exact"},{"name":"malignant neoplasm of biliary tree","type":"exact"},{"name":"malignant tumor of biliary tract","type":"exact"},{"name":"malignant tumour of biliary tract","type":"exact"}],"termid":"MONDO:0003060","xrefs":{"Monarch":{"xref_id":"0003060"}}}


id: MONDO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant trophoblastic tumor that arises from the ovary as a result of ectopic ovarian pregnancy. There is no germ cell component present.","definition_xrefs":["NCIT:C40442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma of ovary","termid":"MONDO:0003507"},{"relation_name":"is_a","term_name":"malignant non-dysgerminomatous germ cell tumor of ovary","termid":"MONDO:0016096"},{"relation_name":"is_a","term_name":"gestational choriocarcinoma","termid":"MONDO:0020550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gestational ovarian choriocarcinoma","secondary_identifiers":["DOID:7591","MEDGEN:274586","UMLS:C1517538"],"synonyms":[{"name":"gestational ovarian choriocarcinoma","type":"exact"}],"termid":"MONDO:0004294","xrefs":{"Monarch":{"xref_id":"0004294"}}}


id: GO:0100065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates leucine import.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of leucine import by transcription from RNA polymerase II promoter (obsolete GO:0100065)","termid":"GO:0100065"}


id: PBO:0055013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2428","termid":"PBO:0055013"}


id: SO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant located with the sequence of the mature miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_miRNA_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"VEP:mature_miRNA_variant","type":"exact"},{"name":"mature miRNA variant","type":"exact"},{"name":"snpEff:MICRO_RNA","type":"exact"},{"name":"within_mature_miRNA","type":"exact"}],"termid":"SO:0001620"}


id: PBO:0038965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity dependent neuroprotector homeobox","termid":"PBO:0038965"}


id: PBO:0090832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Spt6","termid":"PBO:0090832"}


id: GO:0010645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication via chemical coupling. Cell communication by chemical coupling is the process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:kmv","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"regulates","term_name":"cell communication by chemical coupling","termid":"GO:0010643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by chemical coupling","termid":"GO:0010645"}


id: MONDO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A membrane on the vitreal surface of the retina resulting from the proliferation of one or more of three retinal elements: (1) fibrous astrocytes; (2) fibrocytes; and (3) retinal pigment epithelial cells. Localized epiretinal membranes may occur at the posterior pole of the eye without clinical signs or may cause marked loss of vision as a result of covering, distorting, or detaching the fovea centralis. Epiretinal membranes may cause vascular leakage and secondary retinal edema. In younger individuals some membranes appear to be developmental in origin and occur in otherwise normal eyes. The majority occur in association with retinal holes, ocular concussions, retinal inflammation, or after ocular surgery. (Newell, Ophthalmology: Principles and Concepts, 7th ed, p291)","definition_xrefs":["MESH:D019773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration of macula and posterior pole","termid":"MONDO:0002175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"preretinal fibrosis","secondary_identifiers":["UMLS:C0339543","SCTID:367649002","ICD9:362.56","DOID:2006","ICD9:362.89","MEDGEN:87388"],"synonyms":[{"name":"cellophane maculopathy","type":"exact"},{"name":"macular puckering of retina","type":"exact"},{"name":"macular retinal puckering","type":"exact"}],"termid":"MONDO:0002174","xrefs":{"Monarch":{"xref_id":"0002174"}}}


id: MONDO:0025459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral disease of cloven-hoofed animals caused by morbillivirus. It may be acute, subacute, or chronic with the major lesions characterized by inflammation and ulceration of the entire digestive tract. The disease was declared successfully eradicated worldwide in 2010.","definition_xrefs":["MESH:D012301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rinderpest","synonyms":[{"name":"cattle plague","type":"related"},{"name":"plague, cattle","type":"related"}],"termid":"MONDO:0025459","xrefs":{"Monarch":{"xref_id":"0025459"}}}


id: PBO:0045412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 4 pseudogene 1","termid":"PBO:0045412"}


id: GO:0047170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + sinapoyl-CoA = 2-O-sinapoyl-D-glucarate + CoA.","definition_xrefs":["EC:2.3.1.131","RHEA:23308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02899","MetaCyc:2.3.1.131-RXN"],"synonyms":[{"name":"sinapoyl-CoA:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"}],"termid":"GO:0047170"}


id: MONDO:0019849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated micropenis","secondary_identifiers":["Orphanet:95707","UMLS:C5681560","GARD:19292","MEDGEN:1843275"],"termid":"MONDO:0019849","xrefs":{"Monarch":{"xref_id":"0019849"}}}


id: MONDO:0002442
data:
  {"annotated_genes":["SJAG_04781","SJAG_03764","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85176,85175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014548"},{"annotations":[85173,85174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014550"},{"annotations":[86461,86460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"},{"annotations":[87111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013367"}]},"cv_name":"mondo","definition":"A condition that is characterized by episodes of fainting (syncope) and varying degree of ventricular arrhythmia as indicated by the prolonged QT interval. The inherited forms are caused by mutation of genes encoding cardiac ion channel proteins. The two major forms are Romano-Ward syndrome (also known as long QT syndrome 1) and Jervell-Lange Nielsen syndrome.","definition_xrefs":["MESH:D008133"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03764":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2100053","NCIT:C34786","UMLS:C0023976","NANDO:2200228","ICD10CM:I45.81","DOID:2843","ICD9:426.82","MEDGEN:44193"],"synonyms":[{"name":"LQT","type":"exact"},{"name":"long Q-T syndrome","type":"exact"},{"name":"long QT syndrome","type":"exact"},{"name":"ventricular arrhythmia associated with long QT syndrome","type":"exact"}],"termid":"MONDO:0002442","terms_by_termid":{"MONDO:0013367":null,"MONDO:0014548":null,"MONDO:0014550":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0002442"}}}


id: PBO:0044753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 39B","termid":"PBO:0044753"}


id: PBO:0052211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ5 divergent transcript","termid":"PBO:0052211"}


id: PBO:0086034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, essential for stationary phase survival; not required for growth on nonfermentable carbon sources; possibly linked with vacuolar transport","termid":"PBO:0086034"}


id: GO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing entity that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete copper electron carrier (obsolete GO:0015003)","synonyms":[{"name":"copper electron carrier","type":"exact"}],"termid":"GO:0015003"}


id: FYPO:0003912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair via homologous recombination occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA recombination during vegetative growth","termid":"FYPO:0002340"},{"relation_name":"is_a","term_name":"decreased double-strand break repair during vegetative growth","termid":"FYPO:0003660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased double-strand break repair via homologous recombination","synonyms":[{"name":"decreased double-strand break repair via homologous recombination during mitotic cell cycle","type":"related"},{"name":"decreased double-strand break repair via homologous recombination during vegetative growth","type":"exact"},{"name":"reduced double-strand break repair via homologous recombination","type":"exact"}],"termid":"FYPO:0003912"}


id: PBO:0069188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 442, pseudogene","termid":"PBO:0069188"}


id: PBO:0081759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 689","termid":"PBO:0081759"}


id: PBO:0042016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 73","termid":"PBO:0042016"}


id: PBO:0113327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; added to genome annotation based on evolutionary, translation, and proteomics evidence","termid":"PBO:0113327"}


id: PR:Q9Y7S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C569.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.05c","synonyms":[{"name":"Spom972h-SPCC569.05c","type":"exact"}],"termid":"PR:Q9Y7S4"}


id: MONDO:0019691
data:
  {"annotated_genes":["SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01370":null},"genotype_count":0,"is_obsolete":false,"name":"short rib dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:609403","Orphanet:93426","ICD9:756.3","UMLS:C0432195","SCTID:254050009","GARD:16822"],"synonyms":[{"name":"SRP","type":"exact"},{"name":"ciliopathies with major skeletal involvement","type":"related"},{"name":"short-rib dysplasia (with or without polydactyly)","type":"exact"}],"termid":"MONDO:0019691","terms_by_termid":{"MONDO:0054565":null},"xrefs":{"Monarch":{"xref_id":"0019691"}}}


id: GO:0035946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading messenger RNA (mRNA) within the mitochondrion.","definition_xrefs":["GOC:ans","PMID:19864255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"},{"relation_name":"is_a","term_name":"mitochondrial RNA surveillance","termid":"GO:2000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mitochondrial mRNA surveillance","synonyms":[{"name":"mitochondrial aberrant RNA catabolic process","type":"exact"},{"name":"mitochondrial mRNA quality control","type":"exact"},{"name":"mitochondrial messenger RNA surveillance","type":"exact"}],"termid":"GO:0035946"}


id: FYPO:0006875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is abnormal.","definition_xrefs":["PMID:17895368","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"abnormal protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell end during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006875"}


id: MONDO:0008796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aniridia - renal agenesis - psychomotor retardation is an extremely rare syndrome reported in two siblings of non consanguineous parents that is characterized by the association of ocular abnormalities (partial aniridia, congenital glaucoma, telecanthus) with frontal bossing, hypertelorism, unilateral renal agenesis and mild psychomotor delay. There have been no further descriptions in the literature since 1974.","definition_xrefs":["Orphanet:1064"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aniridia-renal agenesis-psychomotor retardation syndrome","secondary_identifiers":["SCTID:733116005","MEDGEN:347952","GARD:690","MESH:C000598722","OMIM:206750","UMLS:C1859782"],"synonyms":[{"name":"Sommer Rathbun Battles syndrome","type":"related"},{"name":"Sommer-Rathbun-Battles syndrome","type":"exact"},{"name":"aniridia partial with unilateral renal agenesis and psychomotor retardation","type":"related"},{"name":"aniridia renal agenesis psychomotor retardation","type":"related"},{"name":"aniridia, partial, with unilateral renal agenesis and psychomotor retardation","type":"related"}],"termid":"MONDO:0008796","xrefs":{"Monarch":{"xref_id":"0008796"}}}


id: GO:0006527
data:
  {"annotated_genes":["SJAG_00495","SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[70127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[113009,78046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"arginine catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"arginine breakdown","type":"exact"},{"name":"arginine catabolism","type":"exact"},{"name":"arginine degradation","type":"exact"}],"termid":"GO:0006527","terms_by_termid":{"GO:0010121":null,"GO:0019544":null,"GO:0019547":null}}


id: PBO:0050924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 7","termid":"PBO:0050924"}


id: MONDO:0009167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bonnemann-Meinecke-Reich syndrome is a syndrome of multiple congenital anomalies characterized by an encephalopathy which predominantly occurs in the first year of life and presenting as psychomotor delay. Additional features of the disease include moderate dysmorphia, craniosynostosis, dwarfism (due to growth hormone deficiency), intellectual disability, spasticity, ataxia, retinal degeneration, and adrenal and uterine hypoplasia. The disease has been described in only two families, with each family having two affected siblings. An autosomal recessive inheritance has been suggested. There have been no further descriptions in the literature since 1991.","definition_xrefs":["Orphanet:1261"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bonnemann-Meinecke-Reich syndrome","secondary_identifiers":["MEDGEN:346482","OMIM:225755","GARD:2113","MESH:C565594","UMLS:C1856973","SCTID:733049004"],"synonyms":[{"name":"Bonnemann Meinecke Reich syndrome","type":"related"},{"name":"encephalopathy intracranial calcification growth hormone deficiency microcephaly retinal degeneration","type":"related"},{"name":"encephalopathy with intracranial calcification, growth hormone deficiency, microcephaly, and retinal degeneration","type":"related"},{"name":"encephalopathy-intracerebral calcification-retinal degeneration syndrome","type":"exact"}],"termid":"MONDO:0009167","xrefs":{"Monarch":{"xref_id":"0009167"}}}


id: GO:0006326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bent DNA binding (obsolete GO:0006326)","synonyms":[{"name":"bent DNA binding","type":"exact"}],"termid":"GO:0006326"}


id: PBO:0002562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc14","termid":"PBO:0002562"}


id: PBO:0027005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_vegetative_growth","termid":"PBO:0027005"}


id: PBO:0089781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery involved in ribosome biogenesis protein Lto1","termid":"PBO:0089781"}


id: GO:0005835
data:
  {"annotated_genes":["SJAG_04972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58158,71842],"is_not":false,"summary":null,"term":"GO:0005835"}]},"cv_name":"cellular_component","definition":"A multienzyme complex that catalyses the synthesis of fatty acids from acetyl CoA.","definition_xrefs":["GOC:pde","ISBN:0716746840","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"fatty acid synthase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:Fatty_acid_synthetase_complex","GO:0031374","GO:0031373"],"synonyms":[{"name":"FAS complex","type":"exact"},{"name":"cytosolic FAS complex","type":"exact"},{"name":"cytosolic fatty acid synthase complex","type":"exact"},{"name":"cytosolic type I FAS complex","type":"exact"},{"name":"cytosolic type I fatty acid synthase complex","type":"exact"},{"name":"fatty acid synthetase complex","type":"exact"},{"name":"holo-[acyl-carrier-protein] synthase complex","type":"related"}],"termid":"GO:0005835","terms_by_termid":{"GO:0005835":null}}


id: MONDO:0019149
data:
  {"annotated_genes":["SJAG_02068","SJAG_00158","SJAG_04790"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85088,85089,85090],"is_not":false,"summary":null,"term":"MONDO:0019149"}]},"cv_name":"mondo","definition":"A form of lysosomal acid lipase deficiency characterized by progressive cholesterol esters and triglyceride accumulation in tissues and organs typically presenting with hepatosplenomegaly, liver dysfunction and/or dyslipidemia.","definition_xrefs":["Orphanet:75234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal acid lipase deficiency","termid":"MONDO:0800449"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"cholesteryl ester storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2201233","icd11.foundation:894336362","MEDGEN:40266","GARD:12099","SCTID:57218003","NORD:929","OMIM:278000","DOID:14502","UMLS:C0008384","NANDO:1200144"],"synonyms":[{"name":"CESD","type":"related"},{"name":"LAL deficiency, partial","type":"exact"},{"name":"LIPA deficiency, partial","type":"exact"},{"name":"cholesterol ester hydrolase deficiency, partial","type":"exact"},{"name":"cholesterol ester storage disease","type":"exact"},{"name":"lysosomal acid lipase deficiency, partial","type":"exact"},{"name":"lysosomal and lipase deficiency","type":"related"}],"termid":"MONDO:0019149","terms_by_termid":{"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0019149"}}}


id: PBO:0083803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that associates with contractile actomyosin ring; required for ingression of the plasma membrane into the bud neck during cytokinesis; C2 domain, a membrane targeting module, is required for function; activates chitin synthase activity of Chs2p during cytokinesis","termid":"PBO:0083803"}


id: MONDO:1012742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary open angle glaucoma that occurs in dogs due to a mutation in the ADAMTS10 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"primary open angle glaucoma, dog","termid":"MONDO:1012498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open angle glaucoma, ADAMTS10-related, dog","secondary_identifiers":["OMIA:001870-9615"],"termid":"MONDO:1012742","xrefs":{"Monarch":{"xref_id":"1012742"}}}


id: PBO:0069040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 285, pseudogene","termid":"PBO:0069040"}


id: GO:0015319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in).","definition_xrefs":["TC:2.A.1.14.6"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:inorganic phosphate symporter activity (obsolete GO:0015319)","synonyms":[{"name":"sodium:phosphate symporter activity","type":"exact"}],"termid":"GO:0015319"}


id: PBO:0086476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; null mutant is viable","termid":"PBO:0086476"}


id: MONDO:0020315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Unclassified myelodysplastic syndrome (MDS-U) is a subtype of myelodysplastic syndrome (MDS) with atypical features of uncertain clinical significance.","definition_xrefs":["Orphanet:98827"],"gene_count":0,"genotype_count":0,"name":"obsolete unclassified myelodysplastic syndrome (obsolete MONDO:0020315)","secondary_identifiers":["icd11.foundation:1684468291"],"termid":"MONDO:0020315","xrefs":{"Monarch":{"xref_id":"0020315"}}}


id: GO:0047351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 GTP + H+ = P(1),P(4)-bis(5'-guanosyl) tetraphosphate + diphosphate + H+.","definition_xrefs":["RHEA:18153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GTP guanylyltransferase activity","secondary_identifiers":["EC:2.7.7.45","MetaCyc:2.7.7.45-RXN","KEGG_REACTION:R00012"],"synonyms":[{"name":"GTP:GTP guanylyltransferase activity","type":"broad"},{"name":"guanosine-triphosphate guanylyltransferase activity","type":"exact"}],"termid":"GO:0047351"}


id: PBO:0038787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase","termid":"PBO:0038787"}


id: GO:0102048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-isoleucine + ATP(4-) = H+ + indole-3-acetyl-isoleucine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:15659623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetyl-isoleucine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10430"],"termid":"GO:0102048"}


id: MONDO:0030433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, type 2FF","secondary_identifiers":["MEDGEN:1794191","UMLS:C5561981","OMIM:619519"],"synonyms":[{"name":"CMT2FF","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy","type":"exact"}],"termid":"MONDO:0030433","xrefs":{"Monarch":{"xref_id":"0030433"}}}


id: MONDO:0012327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 18p11.32-p11.31.","definition_xrefs":["PMID:15637723","DOID:0110503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 46","secondary_identifiers":["GARD:22615","MEDGEN:355302","MESH:C566459","OMIM:609647","UMLS:C1864815"],"synonyms":[{"name":"DFNB46","type":"narrow"},{"name":"autosomal recessive deafness 46","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 46","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 46","type":"narrow"},{"name":"deafness, autosomal recessive 46","type":"narrow"}],"termid":"MONDO:0012327","xrefs":{"Monarch":{"xref_id":"0012327"}}}


id: PBO:0028811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028811"}


id: FYECO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glucose","termid":"FYECO:0000181"}


id: FYPO:0006797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of cell separation after cytokinesis","synonyms":[{"name":"delayed cell separation after cytokinesis","type":"exact"},{"name":"delayed onset of cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"delayed onset of cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"delayed onset of mitotic cytokinetic cell separation","type":"exact"},{"name":"delayed onset of septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0006797"}


id: MONDO:1040046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the LZTFL1 gene.","definition_xrefs":["PMID:26216965","PMID:20301537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LZTFL1-related ciliopathy","synonyms":[{"name":"LZTFL1-related ciliopathy","type":"exact"}],"termid":"MONDO:1040046","xrefs":{"Monarch":{"xref_id":"1040046"}}}


id: GO:0033085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation in thymus","termid":"GO:0033081"},{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"negatively_regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell differentiation in thymus","synonyms":[{"name":"negative regulation of T cell development in thymus","type":"related"},{"name":"negative regulation of thymic T cell differentiation","type":"exact"},{"name":"negative regulation of thymocyte cell differentiation","type":"exact"},{"name":"negative regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033085"}


id: MONDO:0018924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare X-linked inherited form of syndromic microphthalmia characterized by unilateral or bilateral microphthalmia (and/or clinical anophthalmia) with or without coloboma in addition to a range of extraocular manifestations such as microcephaly, malformed ears, dental abnormalities (i.e. irregular shape of incisors), skeletal anomalies (duplicated thumbs, syndactyly, clinodactyly, camptodactyly), urogenital anomalies (hypospadias, cryptorchidism, renal dysgenesis, hydroureter) and mild to severe intellectual disability. It is allelic to two disorders: oculofaciocardiodental syndrome and premature aging appearance-developmental delay-cardiac arrhythmia syndrome.","definition_xrefs":["Orphanet:568"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"excluded_subClassOf","term_name":"NAA10-related syndrome","termid":"MONDO:0100124"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, Lenz type","secondary_identifiers":["NORD:1359","GARD:87","icd11.foundation:678242327"],"synonyms":[{"name":"Lenz Microphthalmia Syndrome","type":"exact"},{"name":"Lenz dysplasia","type":"related"},{"name":"Lenz microphthalmia","type":"exact"},{"name":"Lenz microphthamia syndrome","type":"exact"},{"name":"MAA (formerly)","type":"related"},{"name":"MCOPS1","type":"related"},{"name":"microphthalmia Lenz type","type":"related"},{"name":"microphthalmia or anophthalmos with associated anomalies (formerly)","type":"related"},{"name":"microphthalmia syndromic 1","type":"related"},{"name":"syndromic microphthalmia type 1","type":"related"}],"termid":"MONDO:0018924","xrefs":{"Monarch":{"xref_id":"0018924"}}}


id: GO:0030002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic anions within a cell. Monatomic anions (also called simple anions) are anions consisting of exactly one atom.","definition_xrefs":["GOC:ceb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic ion homeostasis","termid":"GO:0006873"},{"relation_name":"is_a","term_name":"monoatomic anion homeostasis","termid":"GO:0055081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular monoatomic anion homeostasis","synonyms":[{"name":"cellular anion homeostasis","type":"broad"},{"name":"cellular monoatomic anion homeostasis","type":"exact"}],"termid":"GO:0030002"}


id: GO:0052615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-kaur-16-ene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = ent-kaur-16-en-19-oate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:32323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ent-kaurene oxidase activity","secondary_identifiers":["EC:1.14.14.86","MetaCyc:1.14.13.78-RXN"],"termid":"GO:0052615"}


id: PBO:0039043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 antisense RNA 1","termid":"PBO:0039043"}


id: PBO:0079839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC5C antisense RNA 1","termid":"PBO:0079839"}


id: PBO:0056434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 7","termid":"PBO:0056434"}


