# terms

id: PBO:0004650
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile cerebral and cerebellar atrophy","termid":"PBO:0004650"}


id: PBO:0060571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 7, pseudogene","termid":"PBO:0060571"}


id: GO:0141127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters a Rab protein family-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24251537","PMID:30181274","PMID:30893609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host small GTPase-mediated signal transduction","termid":"GO:0044082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host Rab small GTPase signal transduction","synonyms":[{"name":"modulation by symbiont of host Rab protein mediated signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein-mediated signal transduction","type":"exact"},{"name":"modulation of host Rab protein signal transduction by symbiont","type":"exact"},{"name":"modulation of host Rab protein signaling by symbiont","type":"exact"},{"name":"modulation of host Rab protein signalling by symbiont","type":"exact"},{"name":"perturbation of host Rab protein signal transduction","type":"exact"},{"name":"symbiont-mediated perturbation of host Rab protein signal transduction","type":"exact"}],"termid":"GO:0141127"}


id: PBO:0068459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 35, pseudogene","termid":"PBO:0068459"}


id: FYECO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing pyruvate, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate MM","synonyms":[{"name":"pyruvate minimal medium","type":"exact"}],"termid":"FYECO:0000376"}


id: MONDO:0020116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of blood coagulation disease that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare blood coagulation disease (obsolete MONDO:0020116)","secondary_identifiers":["Orphanet:98429"],"synonyms":[{"name":"rare blood coagulation disease","type":"exact"},{"name":"rare coagulation disorder","type":"related"}],"termid":"MONDO:0020116","xrefs":{"Monarch":{"xref_id":"0020116"}}}


id: FYPO:0002054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to hydroxyurea. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to hydroxyurea (obsolete FYPO:0002054)","synonyms":[{"name":"cut during cellular response to HU","type":"exact"},{"name":"cut during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002054"}


id: PBO:0075347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOS Ras/Rho guanine nucleotide exchange factor 2","termid":"PBO:0075347"}


id: GO:1903357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription initiation from RNA polymerase I promoter.","definition_xrefs":["GO_REF:0000058","PMID:9092673","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase I","termid":"GO:0006356"},{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription initiation","termid":"GO:2000142"},{"relation_name":"regulates","term_name":"transcription initiation at RNA polymerase I promoter","termid":"GO:0006361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"regulation of transcription initiation by RNA polymerase I","synonyms":[{"name":"regulation of transcription initiation from RNA polymerase I promoter","type":"exact"},{"name":"regulation of transcription initiation from RNA polymerase I promoter for nuclear large rRNA transcript","type":"narrow"}],"termid":"GO:1903357"}


id: PR:O14333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylserine decarboxylase proenzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10067:SF0","PRO:DNx","OMA:SCHPO03068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.18","secondary_identifiers":["UniProtKB:O14333"],"synonyms":[{"name":"Spom972h-PISD","type":"exact"}],"termid":"PR:O14333"}


id: MONDO:0000935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign exophytic neoplasm that arises from the larynx, usually the true vocal cords. It is related to human papillomavirus infection and may arise as a single or multiple lesions. It is characterized by the presence of a connective tissue core covered by stratified squamous epithelium. Hoarseness is the presenting symptom. Transformation to carcinoma is rare.","definition_xrefs":["NCIT:C7742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"},{"relation_name":"is_a","term_name":"benign laryngeal neoplasm","termid":"MONDO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"larynx squamous papilloma","secondary_identifiers":["DOID:10071","MEDGEN:116099","UMLS:C0240164"],"synonyms":[{"name":"laryngeal papilloma","type":"exact"},{"name":"larynx papilloma","type":"exact"},{"name":"larynx squamous papilloma","type":"exact"},{"name":"papilloma of larynx","type":"exact"},{"name":"papilloma of the larynx","type":"exact"},{"name":"squamous papilloma of larynx","type":"exact"},{"name":"squamous papilloma of the larynx","type":"exact"}],"termid":"MONDO:0000935","xrefs":{"Monarch":{"xref_id":"0000935"}}}


id: PBO:0066470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rieske Fe-S domain containing","termid":"PBO:0066470"}


id: PBO:0052710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 2","termid":"PBO:0052710"}


id: MONDO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute infectious disorder that is caused by gram positive or gram negative bacteria; representative examples include pneumococcal, streptococcal, salmonella, and meningeal infections.","definition_xrefs":["NCIT:C2890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial infectious disease","secondary_identifiers":["ICD9:040.89","SCTID:87628006","ICD9:041.89","MEDGEN:14012","MESH:D001424","DOID:104","ICD9:041.9","EFO:0000771","UMLS:C0004623"],"synonyms":[{"name":"Bacteria caused disease or disorder","type":"exact"},{"name":"Bacteria disease or disorder","type":"exact"},{"name":"Bacteria infectious disease","type":"exact"},{"name":"bacterial disease","type":"exact"},{"name":"bacterial disorder","type":"exact"},{"name":"bacterial infection","type":"exact"},{"name":"bacterial infectious disease","type":"exact"},{"name":"infection, bacterial","type":"exact"},{"name":"infections, bacterial","type":"related"}],"termid":"MONDO:0005113","xrefs":{"Monarch":{"xref_id":"0005113"}}}


id: MONDO:0019882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 8q is a rare chromosomal anomaly syndrome resulting from the partial duplication of the long arm of chromosome 8, with a highly variable phenotype, typically characterized by growth and developmental delay, intellectual disability, short stature, craniofacial dysmorphism (microcephaly, prominent forehead, hypertelorism, abnormal palpebral fissures, low-set, large ears, anteverted tip of nose, micro/retrognathia), congenital heart defects and skeletal and limb anomalies. Other reported features include ophthalmologic abnormalities (e.g. megalocornea), cryptorchidism, hypertrichosis, and neurologic manifestations (e.g. hypotonia, hearing loss, and seizures).","definition_xrefs":["Orphanet:96100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 8","termid":"MONDO:0016959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 8q","secondary_identifiers":["UMLS:C4706365","SCTID:763277009","MEDGEN:1637956","GARD:19315"],"synonyms":[{"name":"distal duplication 8q","type":"exact"},{"name":"distal trisomy type 8q","type":"exact"},{"name":"telomeric duplication 8q","type":"exact"},{"name":"trisomy 8qter","type":"exact"}],"termid":"MONDO:0019882","xrefs":{"Monarch":{"xref_id":"0019882"}}}


id: PR:O74360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga4 gene.","definition_xrefs":["UniProtKB:O74360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.03","synonyms":[{"name":"Spom972h-rga4","type":"exact"}],"termid":"PR:O74360"}


id: PBO:0067264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 338, pseudogene","termid":"PBO:0067264"}


id: PBO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_size","termid":"PBO:0030679"}


id: PBO:0039872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP29 antisense RNA 1","termid":"PBO:0039872"}


id: MONDO:0019405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Facial onset sensory and motor neuronopathy is characterized initially by paraesthesia and numbness in the region of the trigeminal nerve distribution, which later progresses to involve the scalp, neck, upper trunk and upper limbs. Onset of motor manifestations occurs later with cramps, fasciculations, dysphagia, dysarthria, muscle weakness and atrophy. This syndrome has been described in four males and appears to be a slowly progressive neurodegenerative disease.","definition_xrefs":["Orphanet:85162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"facial onset sensory and motor neuronopathy","secondary_identifiers":["UMLS:C4509818","SCTID:723306004","GARD:12036","MEDGEN:1374397"],"synonyms":[{"name":"FOSMN syndrome","type":"exact"},{"name":"facial onset sensorimotor neuronopathy syndrome","type":"related"},{"name":"facial onset sensory and motor neuronopathy syndrome","type":"related"}],"termid":"MONDO:0019405","xrefs":{"Monarch":{"xref_id":"0019405"}}}


id: PBO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Vps24","termid":"PBO:0002532"}


id: PBO:0091613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Klf1","termid":"PBO:0091613"}


id: PR:Q9Y7S2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.03 gene.","definition_xrefs":["UniProtKB:Q9Y7S2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0612 protein C569.003 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.03","synonyms":[{"name":"Spom972h-SPCC569.03","type":"exact"}],"termid":"PR:Q9Y7S2"}


id: MONDO:0012002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 22q11.21-q12.1.","definition_xrefs":["DOID:0110499","PMID:14512974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 40","secondary_identifiers":["UMLS:C1842345","MESH:C564266","MEDGEN:334053","OMIM:608264","GARD:22607"],"synonyms":[{"name":"DFNB40","type":"narrow"},{"name":"autosomal recessive deafness 40","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 40","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 40","type":"narrow"},{"name":"deafness, autosomal recessive 40","type":"narrow"}],"termid":"MONDO:0012002","xrefs":{"Monarch":{"xref_id":"0012002"}}}


id: PBO:0075503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 1","termid":"PBO:0075503"}


id: PBO:0027142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity","termid":"PBO:0027142"}


id: PBO:0027408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_cell_division_site","termid":"PBO:0027408"}


id: GO:0042364
data:
  {"annotated_genes":["SJAG_00691","SJAG_00106","SJAG_03679","SJAG_01881","SJAG_00376","SJAG_00480","SJAG_00283","SJAG_01054","SJAG_02225","SJAG_04866","SJAG_03362","SJAG_03632","SJAG_04156","SJAG_00252","SJAG_04067","SJAG_04845","SJAG_03275","SJAG_01970","SJAG_01126","SJAG_04481","SJAG_02408","SJAG_01383","SJAG_02421","SJAG_01543","SJAG_00491","SJAG_00381","SJAG_02360","SJAG_02491","SJAG_03538","SJAG_04282","SJAG_00827","SJAG_00707","SJAG_01935","SJAG_05200","SJAG_00043","SJAG_00815","SJAG_04711","SJAG_02420","SJAG_00673","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[75947,79152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[105882,56915,68600,112211,60426,104581,108147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[71927,88638,77279,113176,102543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[88784,113487],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[74908,77896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[114194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[63834,75225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[111624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[75228,63831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[70926,59883,76213,65521,60409,77674,78455,116981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[73714,61331,69662,76793,78189,73609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[67098,65329,113399,115830,113393,77979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[99314,110245,110246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a diverse group of vitamins that are soluble in water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"vitamin biosynthetic process","termid":"GO:0009110"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00252":null,"SJAG_00283":null,"SJAG_00376":null,"SJAG_00381":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00815":null,"SJAG_00827":null,"SJAG_01054":null,"SJAG_01126":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_01935":null,"SJAG_01970":null,"SJAG_02225":null,"SJAG_02360":null,"SJAG_02406":null,"SJAG_02408":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02491":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04067":null,"SJAG_04156":null,"SJAG_04282":null,"SJAG_04481":null,"SJAG_04711":null,"SJAG_04845":null,"SJAG_04866":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"water-soluble vitamin biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"water-soluble vitamin anabolism","type":"exact"},{"name":"water-soluble vitamin biosynthesis","type":"exact"},{"name":"water-soluble vitamin formation","type":"exact"},{"name":"water-soluble vitamin synthesis","type":"exact"}],"termid":"GO:0042364","terms_by_termid":{"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042821":null,"GO:0042823":null,"GO:0046656":null,"GO:0090180":null}}


id: MONDO:0003982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma that affects both breasts in a simultaneous or non-simultaneous manner.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bilateral breast carcinoma","secondary_identifiers":["UMLS:C0281267","MEDGEN:128977","DOID:6741","NCIT:C8287"],"synonyms":[{"name":"bilateral breast cancer","type":"broad"},{"name":"bilateral breast carcinoma","type":"exact"}],"termid":"MONDO:0003982","xrefs":{"Monarch":{"xref_id":"0003982"}}}


id: GO:2000198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"negatively_regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribonucleoprotein complex localization","synonyms":[{"name":"negative regulation of RNP localization","type":"exact"},{"name":"negative regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000198"}


id: PBO:0043482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 4","termid":"PBO:0043482"}


id: PBO:0067398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 504, pseudogene","termid":"PBO:0067398"}


id: GO:0002952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-hydroxy-3,4-dioxopentyl phosphate = 3-hydroxy-2,4-dioxopentyl phosphate.","definition_xrefs":["RHEA:44360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity","secondary_identifiers":["EC:5.3.1.32","MetaCyc:RXN-15216"],"synonyms":[{"name":"phospho-AI-2 isomerase activity","type":"related"}],"termid":"GO:0002952"}


id: PBO:0060834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 like E3 ubiquitin protein ligase","termid":"PBO:0060834"}


id: BFO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_in","termid":"BFO:0000066"}


id: GO:0014895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size of its smooth muscle cells without cell division. Physiological hypertrophy is a normal process during development, and can also occur in mature structures on demand. In the uterus, smooth muscle cells undergo hypertrophy during pregnancy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle adaptation","termid":"GO:0014805"},{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle hypertrophy","termid":"GO:0014895"}


id: PBO:0053156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase D","termid":"PBO:0053156"}


id: PBO:0089183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Chl1","termid":"PBO:0089183"}


id: GO:1904713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-catenin destruction complex.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:22899650","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"beta-catenin destruction complex binding","synonyms":[{"name":"23S APC complex binding","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex binding","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex binding","type":"exact"},{"name":"BDC binding","type":"exact"},{"name":"beta-catenin degradation complex binding","type":"exact"}],"termid":"GO:1904713"}


id: PBO:0069131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 381, pseudogene","termid":"PBO:0069131"}


id: GO:1990690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a Golgi medial cisterna-derived vesicle to the lipid bilayer membrane around the Golgi cis cisterna. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["PMID:24119662","PMID:16038056","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"retrograde transport, vesicle recycling within Golgi","termid":"GO:0000301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"Golgi medial cisterna-derived vesicle fusion with Golgi cis cisterna membrane","synonyms":[{"name":"Golgi apparatus medial cisterna-derived vesicle fusion with Golgi apparatus cis cisterna membrane","type":"exact"},{"name":"medial-Golgi cisterna-derived vesicle fusion with cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990690"}


id: PBO:0074732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 90","termid":"PBO:0074732"}


id: PBO:0090782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 family RNA-binding protein Pof8/Lar7","termid":"PBO:0090782"}


id: PBO:0058201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4494","termid":"PBO:0058201"}


id: GO:0000930
data:
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id: GO:0090602
data:
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id: GO:0044391
data:
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id: GO:0098923
data:
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id: PBO:0068194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 501","termid":"PBO:0068194"}


id: PBO:0042994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 7","termid":"PBO:0042994"}


id: MONDO:0000453
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859368"}]},"cv_name":"mondo","definition":"A genetic disease of the electrical system of the heart that consists of a constellation of signs and symptoms, consisting of a short QT interval on an EKG (< 300 ms) that does not significantly change with heart rate, tall and peaked T waves, and a structurally normal heart. Short QT syndrome appears to be inherited in an autosomal dominant pattern, and a few affected families have been identified","definition_xrefs":["Wikipedia:Short_QT_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"short QT syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16650","Orphanet:51083","DOID:0050793","MESH:C580439","OMIMPS:609620","icd11.foundation:553392015","SCTID:698272007","NCIT:C71060","NORD:2019","ICD9:426.89","MEDGEN:378835","UMLS:C2348199"],"synonyms":[{"name":"familial short QT syndrome","type":"related"},{"name":"short QT syndrome","type":"exact"},{"name":"ventricular arrhythmia associated with short QT syndrome","type":"exact"}],"termid":"MONDO:0000453","terms_by_termid":{"MONDO:0859368":null},"xrefs":{"Monarch":{"xref_id":"0000453"}}}


id: FYPO:0006691
data:
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id: PBO:0089255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4452 family conserved fungal protein","termid":"PBO:0089255"}


id: PBO:0058291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4666a","termid":"PBO:0058291"}


id: PBO:0070244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 185 pseudogene","termid":"PBO:0070244"}


id: PBO:0083712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in regulation of OLE1 transcription; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting; SPT23 has a paralog, MGA2, that arose from the whole genome duplication","termid":"PBO:0083712"}


id: PBO:0090069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Psu1","termid":"PBO:0090069"}


id: MONDO:0014748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"progressive spondyloepimetaphyseal dysplasia-short stature-short fourth metatarsals-intellectual disability syndrome","secondary_identifiers":["GARD:17808","OMIM:616723","MEDGEN:1800305","UMLS:C5568882","Orphanet:457395"],"synonyms":[{"name":"SEMDFA","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, faden-ALKURAYA type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, faden-Alkuraya type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, progressive, with short stature, Facial Dysmorphism, short fourth metatarsals, and intellectual disability, with or without craniosynostosis","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, progressive, with short stature, Facial Dysmorphism, short fourth metatarsals, and mental retardation, with or without craniosynostosis","type":"related"}],"termid":"MONDO:0014748","xrefs":{"Monarch":{"xref_id":"0014748"}}}


id: PBO:0068488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 72, pseudogene","termid":"PBO:0068488"}


id: GO:0032042
data:
  {"annotated_genes":["SJAG_02658","SJAG_03724","SJAG_00611","SJAG_00198","SJAG_01807","SJAG_03780","SJAG_03957","SJAG_01262","SJAG_03068","SJAG_04752","SJAG_01948","SJAG_01648","SJAG_04064","SJAG_02528","SJAG_05280","SJAG_03906","SJAG_00153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92318,94494,96896,102286,111382],"is_not":false,"summary":null,"term":"GO:0032042"},{"annotations":[90130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032043"},{"annotations":[108356,95905,76051,70856,113705,99095,112314,102667,102687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043504"},{"annotations":[74767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006264"},{"annotations":[95507],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090297"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving mitochondrial DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"mitochondrial genome maintenance","termid":"GO:0000002"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00198":null,"SJAG_00611":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01807":null,"SJAG_01948":null,"SJAG_02528":null,"SJAG_02658":null,"SJAG_03068":null,"SJAG_03724":null,"SJAG_03780":null,"SJAG_03906":null,"SJAG_03957":null,"SJAG_04064":null,"SJAG_04752":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"mitochondrial DNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial DNA metabolism","type":"exact"},{"name":"mtDNA metabolic process","type":"exact"},{"name":"mtDNA metabolism","type":"exact"}],"termid":"GO:0032042","terms_by_termid":{"GO:0006264":null,"GO:0032042":null,"GO:0032043":null,"GO:0043504":null,"GO:0090297":null}}


id: PBO:0046986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member K, pseudogene","termid":"PBO:0046986"}


id: GO:0006505
data:
  {"annotated_genes":["SJAG_03506","SJAG_04881","SJAG_04924","SJAG_00846","SJAG_01227","SJAG_03292","SJAG_04337","SJAG_04165","SJAG_02776","SJAG_00295","SJAG_04119","SJAG_01570","SJAG_06383","SJAG_01416","SJAG_03115","SJAG_02523","SJAG_05278","SJAG_03066","SJAG_00506","SJAG_05327","SJAG_03801","SJAG_00068","SJAG_03878","SJAG_02804","SJAG_01860","SJAG_02488","SJAG_06425","SJAG_03672","SJAG_00831","SJAG_04975","SJAG_02913"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58040,76802,77252,72806,76108,60206,76211,72994,74530,57993,75309,77255,77522,58151,69453,75286,103498,71482,62851,77245,72434,77989,87182,89300,57640,77612,92753,62276,63192,103560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[73442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosylphosphatidylinositol anchors, molecular mechanisms for attaching membrane proteins to the lipid bilayer of cell membranes. Structurally they consist of a molecule of phosphatidylinositol to which is linked, via the C-6 hydroxyl of the inositol, a carbohydrate chain. This chain is in turn linked to the protein through an ethanolamine phosphate group, the amino group of which is in amide linkage with the C-terminal carboxyl of the protein chain, the phosphate group being esterified to the C-6 hydroxyl of the terminal mannose of the core carbohydrate chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"GPI anchor metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0046472"],"synonyms":[{"name":"GPI anchor metabolism","type":"exact"},{"name":"GPI/GSI anchor metabolic process","type":"broad"},{"name":"GPI/GSI anchor metabolism","type":"broad"},{"name":"glycosylphosphatidylinositol metabolic process","type":"exact"},{"name":"glycosylphosphatidylinositol metabolism","type":"exact"}],"termid":"GO:0006505","terms_by_termid":{"GO:0006506":null,"GO:0006676":null}}


id: PBO:0063084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 3","termid":"PBO:0063084"}


id: GO:0090724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The center of the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","PMID:16260607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"central region of growth cone","termid":"GO:0090724"}


id: FYPO:0001651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal lysine import","synonyms":[{"name":"abnormal L-lysine import","type":"exact"},{"name":"abnormal L-lysine import across plasma membrane","type":"exact"},{"name":"abnormal lysine import into cell","type":"exact"},{"name":"abnormal lysine uptake","type":"exact"}],"termid":"FYPO:0001651"}


id: GO:1902080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:rl","PMID:8349590","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"}


id: GO:0034086
data:
  {"annotated_genes":["SJAG_04126","SJAG_03681","SJAG_01601","SJAG_01805","SJAG_04259","SJAG_03926","SJAG_03989","SJAG_00600","SJAG_00229","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113586,115710,101584,93556,101062,98910,104286,107623,113032,114303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate.","definition_xrefs":["PMID:14623866","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034086","terms_by_termid":{"GO:1990813":null}}


id: GO:0047325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["RHEA:12452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-3,4,5,6-tetrakisphosphate 1-kinase activity","secondary_identifiers":["EC:2.7.1.134","Reactome:R-HSA-1855162","Reactome:R-HSA-994137","KEGG_REACTION:R03479","MetaCyc:2.7.1.134-RXN"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 1-kinase activity","type":"related"},{"name":"1D-myo-inositol-trisphosphate 5-kinase activity","type":"related"},{"name":"1D-myo-inositol-trisphosphate 6-kinase activity","type":"related"},{"name":"ATP:1D-myo-inositol-3,4,5,6-tetrakisphosphate 1-phosphotransferase activity","type":"related"},{"name":"inositol 3,4,5,6-tetrakisphosphate 1-kinase activity","type":"exact"},{"name":"inositol tetrakisphosphate 1-kinase activity","type":"broad"},{"name":"inositol-trisphosphate 5-kinase activity","type":"related"},{"name":"inositol-trisphosphate 6-kinase activity","type":"related"}],"termid":"GO:0047325"}


id: GO:0045465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of the R8 photoreceptor.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R8 cell differentiation","termid":"GO:0045465"}


id: GO:1903748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["GO_REF:0000058","PMID:16857185","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"negatively_regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein localization to mitochondrion","synonyms":[{"name":"down regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"down regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"down regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"down-regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"down-regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"down-regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"downregulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"downregulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"downregulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"inhibition of establishment of protein localisation to mitochondrion","type":"narrow"},{"name":"inhibition of establishment of protein localization in mitochondrion","type":"narrow"},{"name":"inhibition of establishment of protein localization to mitochondrion","type":"narrow"},{"name":"negative regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"negative regulation of establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:1903748"}


id: PBO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridylate synthase (predicted)","termid":"PBO:0000279"}


id: PBO:0038526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 8","termid":"PBO:0038526"}


id: PBO:0077448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 181","termid":"PBO:0077448"}


id: GO:0010480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a microsporocyte cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A microsporocyte is a diploid (2n) cell that undergoes meiosis and forms four haploid (1n) microspores; also called microspore mother cell and, in seed plants, pollen mother cell.","definition_xrefs":["PMID:16751349","CL:0000248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"sporocyte differentiation","termid":"GO:0048533"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microsporocyte differentiation","synonyms":[{"name":"pollen mother cell differentiation","type":"related"}],"termid":"GO:0010480"}


id: CHEBI:21759
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methyl-N'-nitro-N-nitrosoguanidine","termid":"CHEBI:21759"}


id: PBO:0091068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ermes regulator Emr1","termid":"PBO:0091068"}


id: PBO:0027654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation_during_mitotic_S_phase","termid":"PBO:0027654"}


id: PBO:0026844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_cytokinesis_gene_mRNA_during_vegetative_growth","termid":"PBO:0026844"}


id: PATO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000748 discrimination value (obsolete PATO:0000748)","termid":"PATO:0000748"}


id: PBO:0116641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF interacting protein 2","termid":"PBO:0116641"}


id: GO:0060067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the cervix over time, from its formation to the mature structure.","definition_xrefs":["GOC:ebc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cervix development","synonyms":[{"name":"Mullerian tract development","type":"related"}],"termid":"GO:0060067"}


id: PBO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 2","termid":"PBO:0072104"}


id: PBO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substrate_is","termid":"PBO:0000015"}


id: PBO:0082961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin patch assembly","termid":"PBO:0082961"}


id: PBO:0109359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109359"}


id: PBO:0033827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm1/Smc1","termid":"PBO:0033827"}


id: PBO:0068834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 72, pseudogene","termid":"PBO:0068834"}


id: GO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed inner ear sensory epithelia.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}


id: PBO:0061194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide N-methyltransferase","termid":"PBO:0061194"}


id: PBO:0048971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2, mitochondrial","termid":"PBO:0048971"}


id: PBO:0086858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA exonuclease; possibly involved in pre-rRNA processing and ribosome assembly","termid":"PBO:0086858"}


id: GO:1990966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of generating ATP in the nucleus from poly-ADP-D-ribose. Nuclear ATP generation is required for extensive chromatin remodeling events that are energy-consuming.","definition_xrefs":["PMID:27257257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"ATP metabolic process","termid":"GO:0046034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ATP generation from poly-ADP-D-ribose","termid":"GO:1990966"}


id: GO:0033839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"flavonol-3-O-glycoside glucosyltransferase activity","secondary_identifiers":["RHEA:23544","MetaCyc:2.4.1.240-RXN"],"synonyms":[{"name":"UDP-glucose:flavonol-3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 2'''-O-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033839"}


id: GO:0034365
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A newly formed high-density lipoprotein particle; consists of a phospholipid bilayer surrounded by two or more APOA1 molecules. The discoidal HDL particle is formed when lipid-free or lipid-poor APOA1 acquires phospholipids and unesterified cholesterol from either cell membranes or triglyceride-rich lipoproteins (undergoing lipolysis by lipoprotein lipase).","definition_xrefs":["GOC:expert_pt","GOC:rl","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-density lipoprotein particle","termid":"GO:0034364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"discoidal high-density lipoprotein particle","synonyms":[{"name":"discoidal HDL","type":"exact"},{"name":"nascent HDL","type":"exact"},{"name":"nascent high-density lipoprotein particle","type":"exact"}],"termid":"GO:0034365"}


id: PBO:0059512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded replication primer","termid":"PBO:0059512"}


id: PBO:0005009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 3","termid":"PBO:0005009"}


id: MONDO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the pulmonary artery It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"},{"relation_name":"is_a","term_name":"great vessel cancer","termid":"MONDO:0040676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary artery leiomyosarcoma","secondary_identifiers":["DOID:7389","UMLS:C1335572","MEDGEN:233372"],"synonyms":[{"name":"leiomyosarcoma of pulmonary artery","type":"exact"},{"name":"leiomyosarcoma of the pulmonary artery","type":"exact"},{"name":"pulmonary artery leiomyosarcoma","type":"exact"}],"termid":"MONDO:0004207","xrefs":{"Monarch":{"xref_id":"0004207"}}}


id: GO:0034302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an akinete, a thick-walled (encysted) dormant cell derived from the enlargement of a vegetative cell, is formed. Akinetes typically have granular cytoplasm, are more resistant to environmental extremes than vegetative cells, and are characteristic of several groups of Cyanobacteria.","definition_xrefs":["GOC:mah","GOC:ds","PMID:11948167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"akinete formation","termid":"GO:0034302"}


id: MONDO:0002534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm that arises from the fallopian tube. It is characterized by the presence of fibrovascular stalks lined by serous epithelial cells.","definition_xrefs":["NCIT:C40112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube benign neoplasm","termid":"MONDO:0000645"},{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube papilloma","secondary_identifiers":["UMLS:C1517123","DOID:3173","MEDGEN:275874"],"synonyms":[{"name":"fallopian tube papilloma","type":"exact"},{"name":"fallopian tube serous papilloma","type":"exact"}],"termid":"MONDO:0002534","xrefs":{"Monarch":{"xref_id":"0002534"}}}


id: FYPO:0000194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which a cellular response to hydrogen peroxide is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress during vegetative growth","termid":"FYPO:0001340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to hydrogen peroxide","synonyms":[{"name":"abnormal cellular response to H2O2","type":"exact"},{"name":"abnormal cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0000194"}


id: PR:P87158
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.08","synonyms":[{"name":"Spom972h-rps401","type":"exact"}],"termid":"PR:P87158"}


id: MONDO:0011168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the IL2RA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 10","secondary_identifiers":["MESH:C566602","DOID:0110749","UMLS:C1866040","OMIM:601942","MEDGEN:400903"],"synonyms":[{"name":"IDDM10","type":"exact"},{"name":"IL2RA type 1 diabetes mellitus","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 10","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 10","type":"exact"},{"name":"diabetes, mellitus, insulin-dependent, susceptibility to, 10","type":"related"},{"name":"insulin-dependent diabetes mellitus 10","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in IL2RA","type":"exact"}],"termid":"MONDO:0011168","xrefs":{"Monarch":{"xref_id":"0011168"}}}


id: PBO:0066561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh associated glycoprotein","termid":"PBO:0066561"}


id: MONDO:0005801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that results in increased proliferation of affected CD4 lymphocytes, has material basis in Human T-lymphotropic virus 1, which is transmitted by sexual contact, transmitted by contaminated needles used by intravenous-drug users, and transmitted by breast feeding. The person infected with HTLV-1 eventually develop an often rapidly fatal leukemia, while others will develop a debilitative myelopathy, uveitis, infectious dermatitis, or another inflammatory disorder.","definition_xrefs":["EFO:0007316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human T-lymphotropic virus 1 infectious disease","secondary_identifiers":["MEDGEN:6919","UMLS:C0020097","MESH:D015490"],"synonyms":[{"name":"HTLV-1","type":"related"},{"name":"Human T lymphotropic virus type 1","type":"related"},{"name":"Human T-lymphotropic virus 1 caused disease or disorder","type":"exact"},{"name":"Human T-lymphotropic virus 1 disease or disorder","type":"exact"},{"name":"Human T-lymphotropic virus 1 infectious disease","type":"exact"},{"name":"human T-lymphotropic virus 1 infectious disease","type":"exact"}],"termid":"MONDO:0005801","xrefs":{"Monarch":{"xref_id":"0005801"}}}


id: PBO:0086664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0086664"}


id: GO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051328"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051328","GO:0008150"],"is_obsolete":false,"name":"meiotic S phase","synonyms":[{"name":"S phase of meiotic cell cycle","type":"exact"},{"name":"S-phase of meiotic cell cycle","type":"exact"},{"name":"premeiotic S-phase","type":"exact"}],"termid":"GO:0051332"}


id: FYPO:0005915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the portion of ribosomal DNA encoding 5S rRNA. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleosome occupancy at 5S rRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at 5S rRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at 5S rRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in 5S rRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at 5S rRNA genes","type":"exact"}],"termid":"FYPO:0005915"}


id: MONDO:0010431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the OFD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 10","secondary_identifiers":["MESH:C567582","UMLS:C2749019","GARD:15265","DOID:0110981","MEDGEN:440688","OMIM:300804"],"synonyms":[{"name":"JBTS10","type":"exact"},{"name":"Joubert syndrome 10","type":"exact"},{"name":"Joubert syndrome 10, X-linked recessive","type":"exact"},{"name":"Joubert syndrome caused by mutation in OFD1","type":"exact"},{"name":"Joubert syndrome type 10","type":"exact"},{"name":"OFD1 Joubert syndrome","type":"exact"}],"termid":"MONDO:0010431","xrefs":{"Monarch":{"xref_id":"0010431"}}}


id: PBO:0089908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery ATPase Nbp35","termid":"PBO:0089908"}


id: MONDO:0016760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-microcornea syndrome, Seemanova type is characterized by microcephaly and brachycephaly, eye anomalies (microphthalmia, microcornea, congenital cataract), hypogenitalism, severe intellectual deficit, growth retardation and progressive spasticity. It has been described in two patients (a male and his sister's son). Both patients also presented with facial dysmorphism, including upslanting palpebral fissures, epicanthal folds, highly arched palate, microstomia, and retrognathia. This syndrome is transmitted as an X-linked trait.","definition_xrefs":["Orphanet:2528"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-microcornea syndrome, Seemanova type","secondary_identifiers":["icd11.foundation:1197077842","SCTID:715464002","UMLS:C2931524","GARD:3627","MESH:C537539","MEDGEN:419433"],"synonyms":[{"name":"Seemanova Lesny syndrome","type":"related"},{"name":"Seemanova-Lesny syndrome","type":"exact"},{"name":"X-linked microcephaly, microphthalmia, microcornea, congenital cataract, hypogenitalism, mental deficiency, growth retardation","type":"related"},{"name":"microcephaly microcornea syndrome Seemanova type","type":"related"}],"termid":"MONDO:0016760","xrefs":{"Monarch":{"xref_id":"0016760"}}}


id: PBO:0067367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 468, pseudogene","termid":"PBO:0067367"}


id: GO:0034152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"negative regulation of TLR6 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034152"}


id: SO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 5S_rRNA, which is a portion of the large subunit of the ribosome in both eukaryotes and prokaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_5S_gene","synonyms":[{"name":"5S rRNA gene","type":"exact"},{"name":"5S_rRNA_gene","type":"exact"}],"termid":"SO:0002238"}


id: PBO:0086683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by homology to <i>Ashbya gossypii</i>","termid":"PBO:0086683"}


id: PBO:0038458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adeno-associated virus integration site 1","termid":"PBO:0038458"}


id: PR:O74366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIH subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02813","PANTHER:PTHR12831:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.07c","secondary_identifiers":["UniProtKB:O74366"],"synonyms":[{"name":"RNA polymerase II transcription factor B 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p34 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2H3","type":"exact"}],"termid":"PR:O74366"}


id: PBO:0090085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Yip1/Gem2","termid":"PBO:0090085"}


id: MOD:01355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3 hydrogen atom of a threonine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1O-glycosylated threonine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01355"}


id: MONDO:0021075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"},{"relation_name":"is_a","term_name":"precancerous condition","termid":"MONDO:0021074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic polyp","secondary_identifiers":["UMLS:C1334941","MEDGEN:233751","NCIT:C7068"],"synonyms":[{"name":"neoplastic polyp","type":"exact"}],"termid":"MONDO:0021075","xrefs":{"Monarch":{"xref_id":"0021075"}}}


id: FYPO:0004073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to a pheromone occurs in G1 phase, but begins only after the cells have undergone two rounds of cell division in the presence of the pheromone.","definition_xrefs":["PomBase:mah","PMID:9034336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to pheromone","termid":"FYPO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase in response to pheromone","synonyms":[{"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase during cellular response to pheromone","type":"exact"},{"name":"two cell divisions prior to mitotic G1 arrest in response to pheromone","type":"exact"},{"name":"two cell divisions prior to mitotic cell cycle arrest in G1 phase in response to pheromone","type":"exact"},{"name":"two cell divisions prior to pheromone-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004073"}


id: PATO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality between two bearers inhering that one bearer is subject to change the nature, function, or condition of itself to become the other.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformed to","termid":"PATO:0002470"}


id: PBO:0045603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 14 (pseudogene)","termid":"PBO:0045603"}


id: MOD:01089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthyl","synonyms":[{"name":"Xan","type":"exact"}],"termid":"MOD:01089"}


id: PBO:0054394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1790","termid":"PBO:0054394"}


id: MOD:01861
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a cysteine thiol with the amido nitrogen of the following residue to form an isothiazolidinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"}


id: PBO:0045661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY30 domain containing 1","termid":"PBO:0045661"}


id: PBO:0045507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DST antisense RNA 1","termid":"PBO:0045507"}


id: GO:0044727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The global programming of epigenetic modifications in the male pronucleus of the newly fertilized zygote. The most major change in the paternal genome is DNA demethylation, which takes place before the first cell division.","definition_xrefs":["PMID:22868271","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic programming in the zygotic pronuclei","termid":"GO:0044725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"epigenetic programing of male pronucleus","synonyms":[{"name":"DNA demethylation of male pronucleus","type":"narrow"},{"name":"epigenetic reprograming of male pronucleus","type":"exact"},{"name":"epigenetic reprograming of paternal genome in zygote","type":"exact"}],"termid":"GO:0044727"}


id: GO:0098875
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microvesicle of the epididymal fluid, from which spermatozoa acquire membrane proteins.","definition_xrefs":["PMID:23177142","GOC:mg","GOC:dos","PMID:26112475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvesicle","termid":"GO:1990742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"epididymosome","termid":"GO:0098875"}


id: PBO:0043228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin like cytokine factor 1","termid":"PBO:0043228"}


id: GO:0019961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interferon, a protein produced by the immune systems of many animals in response to a challenge by a foreign agent.","definition_xrefs":["PMID:9607096","Wikipedia:Interferon"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interferon binding","synonyms":[{"name":"IFN binding","type":"exact"}],"termid":"GO:0019961"}


id: PBO:0077040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC7 antisense RNA 1","termid":"PBO:0077040"}


id: GO:0071630
data:
  {"annotated_genes":["SJAG_03657","SJAG_00054","SJAG_03345","SJAG_04612","SJAG_05022","SJAG_01737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76184,110651],"is_not":false,"summary":null,"term":"GO:0071630"},{"annotations":[103197,87540,89007,112786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180027"}]},"cv_name":"biological_process","definition":"A protein quality control pathway that results in the breakdown of misfolded, damaged or unassembled proteins via a mechanism in which the proteins are ubiquitinated, and then targeted to nuclear proteasomes for degradation.","definition_xrefs":["PMID:20080635","PMID:21211726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"},{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"},{"relation_name":"part_of","term_name":"cellular response to misfolded protein","termid":"GO:0071218"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_01737":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"nuclear protein quality control by the ubiquitin-proteasome system","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleus-associated proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"nucleus-associated proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"nucleus-associated proteasomal ubiquitin-dependent protein degradation","type":"exact"},{"name":"ubiquitin-dependent catabolism of misfolded proteins by nucleus-associated proteasome","type":"exact"}],"termid":"GO:0071630","terms_by_termid":{"GO:0071630":null,"GO:0180027":null}}


id: GO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H2O = N-acetyl-beta-D-glucosaminylamine + L-aspartate + H+.","definition_xrefs":["RHEA:11544","EC:3.5.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity","secondary_identifiers":["KEGG_REACTION:R03421","MetaCyc:3.5.1.26-RXN"],"synonyms":[{"name":"4-N-(beta-N-acetyl-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"N-aspartyl-beta-glucosaminidase activity","type":"related"},{"name":"N4-(beta-N-acetyl-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"aspartylglucosaminidase activity","type":"related"},{"name":"aspartylglucosylaminase activity","type":"related"},{"name":"aspartylglucosylamine deaspartylase activity","type":"related"},{"name":"aspartylglucosylaminidase activity","type":"related"},{"name":"aspartylglycosylamine amidohydrolase activity","type":"related"},{"name":"beta-aspartylglucosylamine amidohydrolase activity","type":"related"},{"name":"glucosylamidase activity","type":"related"},{"name":"glycosylasparaginase activity","type":"related"}],"termid":"GO:0003948"}


id: GO:0034578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: limonene + H2O = alpha-terpineol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete limonene 8-hydratase activity (obsolete GO:0034578)","termid":"GO:0034578"}


id: PBO:0073942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member B1","termid":"PBO:0073942"}


id: PBO:0063748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 13","termid":"PBO:0063748"}


id: GO:0045111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoskeletal structure made from intermediate filaments, typically organized in the cytosol as an extended system that stretches from the nuclear envelope to the plasma membrane. Some intermediate filaments run parallel to the cell surface, while others traverse the cytosol; together they form an internal framework that helps support the shape and resilience of the cell.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intermediate filament cytoskeleton","termid":"GO:0045111"}


id: FYPO:0002410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, cell shape is altered, and cell size remains normal, and in which vacuoles are more visible (usually by microscopy) than normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001312","FYPO:0000257","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"inviable vacuolated vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"inviable vegetative misshapen vacuolated cell","type":"related"},{"name":"inviable, vacuolated, abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lethal; vacuolated vegetative cell, abnormal cell shape, normal cell size","type":"exact"}],"termid":"FYPO:0002410"}


id: PBO:0079438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 6","termid":"PBO:0079438"}


id: FYPO:0000922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of isocitrate dehydrogenase (NAD+) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal isocitrate dehydrogenase (NAD+) activity","synonyms":[{"name":"abnormal NAD-IDH activity","type":"exact"}],"termid":"FYPO:0000922"}


id: PR:Q9Y7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C216.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.01c","synonyms":[{"name":"Spom972h-psy2","type":"exact"}],"termid":"PR:Q9Y7J8"}


id: MONDO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the vulva. Representative examples include infection, Bartholin gland adenoma, and vulvar carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar disease","secondary_identifiers":["NCIT:C27631","DOID:2059","MEDGEN:53055","MESH:D014845","SCTID:5089007","UMLS:C0042994"],"synonyms":[{"name":"disorder of vulva","type":"exact"},{"name":"vulval disorder","type":"related"},{"name":"vulvar disease","type":"exact"},{"name":"vulvar disorder","type":"exact"}],"termid":"MONDO:0002187","xrefs":{"Monarch":{"xref_id":"0002187"}}}


id: MONDO:0012336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 22 multiple types","secondary_identifiers":["DOID:0110268","MESH:C565725","UMLS:C1857853","MEDGEN:341862","OMIM:609741"],"synonyms":[{"name":"CATCN2","type":"narrow"},{"name":"CRYBB3 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT22","type":"exact"},{"name":"autosomal recessive congenital nuclear cataract 2","type":"narrow"},{"name":"cataract 22","type":"exact"},{"name":"cataract 22, multiple types","type":"related"},{"name":"cataract, congenital nuclear, autosomal recessive 2","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYBB3","type":"exact"}],"termid":"MONDO:0012336","xrefs":{"Monarch":{"xref_id":"0012336"}}}


id: PBO:0026716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026716"}


id: PBO:0051562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL12A antisense RNA 1","termid":"PBO:0051562"}


id: GO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"positively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-1 production","secondary_identifiers":["GO:0050716","GO:0045362"],"synonyms":[{"name":"activation of interleukin-1 production","type":"narrow"},{"name":"positive regulation of IL-1 production","type":"exact"},{"name":"positive regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 secretion","type":"narrow"},{"name":"stimulation of interleukin-1 production","type":"narrow"},{"name":"up regulation of interleukin-1 production","type":"exact"},{"name":"up-regulation of interleukin-1 production","type":"exact"},{"name":"upregulation of interleukin-1 production","type":"exact"}],"termid":"GO:0032732"}


id: GO:0007425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an epithelial cell within an open tracheal system regardless of its environment; upon determination, the cell fate cannot be reversed. Tracheal cells are set aside as 10 clusters of approximately 80 cells on each side of the embryo (termed tracheal placodes). An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11063940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell fate determination, open tracheal system","secondary_identifiers":["GO:0046846"],"synonyms":[{"name":"tracheal cell fate determination","type":"broad"},{"name":"tracheal epithelial cell fate determination","type":"exact"},{"name":"tracheal placode cell fate determination","type":"related"}],"termid":"GO:0007425"}


id: SO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes a change in post translational processing of the peptide with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_post_translational_processing_variant","synonyms":[{"name":"polypeptide post translational processing variant","type":"exact"}],"termid":"SO:0001562"}


id: PBO:0072724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor like tyrosine kinase","termid":"PBO:0072724"}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of vasoactive intestinal polypeptide receptor activity in another organism","termid":"GO:0044519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: PBO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 9","termid":"PBO:0072007"}


id: PBO:0053014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 1","termid":"PBO:0053014"}


id: GO:1900593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of violaceol II.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"violaceol II metabolic process","termid":"GO:1900591"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"violaceol II biosynthetic process","synonyms":[{"name":"violaceol II anabolism","type":"exact"},{"name":"violaceol II biosynthesis","type":"exact"},{"name":"violaceol II formation","type":"exact"},{"name":"violaceol II synthesis","type":"exact"}],"termid":"GO:1900593"}


id: PBO:0072760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 10","termid":"PBO:0072760"}


id: PBO:0086248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that mediates sphingolipid homeostasis; evolutionarily conserved, required for resistance to agents that induce unfolded protein response; Orm1p and Orm2p together control membrane biogenesis by coordinating lipid homeostasis with protein quality control; ORM1 has a paralog, ORM2, that arose from the whole genome duplication","termid":"PBO:0086248"}


id: MONDO:0010297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any FG syndrome in which the cause of the disease is a mutation in the FLNA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 2","secondary_identifiers":["MEDGEN:337461","OMIM:300321","UMLS:C1845902"],"synonyms":[{"name":"FG syndrome 2","type":"exact"},{"name":"FG syndrome caused by mutation in FLNA","type":"exact"},{"name":"FG syndrome type 2","type":"exact"},{"name":"FGS2","type":"related"},{"name":"FLNA FG syndrome","type":"exact"}],"termid":"MONDO:0010297","xrefs":{"Monarch":{"xref_id":"0010297"}}}


id: PBO:0069050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 296, pseudogene","termid":"PBO:0069050"}


id: MONDO:0019534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mixed autoimmune hemolytic anemia is a type of autoimmune hemolytic anemia (AIHA) defined by the presence of both warm and cold autoantibodies, which have a deleterious effect on red blood cells at either body temperature or at lower temperatures.","definition_xrefs":["Orphanet:90036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0002280"],"is_obsolete":false,"name":"mixed-type autoimmune hemolytic anemia","secondary_identifiers":["UMLS:C4305257","SCTID:718716008","GARD:19101","icd11.foundation:1878239449","MEDGEN:930926","NANDO:1200309"],"synonyms":[{"name":"mixed AIHA","type":"exact"}],"termid":"MONDO:0019534","xrefs":{"Monarch":{"xref_id":"0019534"}}}


id: PR:P36625
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec7 gene.","definition_xrefs":["UniProtKB:P36625","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.03c","synonyms":[{"name":"Spom972h-rec7","type":"exact"}],"termid":"PR:P36625"}


id: PBO:0039959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 2","termid":"PBO:0039959"}


id: PBO:0049579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone B","termid":"PBO:0049579"}


id: PBO:0081448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 316","termid":"PBO:0081448"}


id: PBO:0003264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-N (predicted)","termid":"PBO:0003264"}


id: MONDO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic purulent otitis media which involves perforation in the attic region (pars flaccida of the tympanic membrane) or at the posterosuperior margin, with in-growth of squamous epithelium into the middle ear. This is caused as a result of poor ventilation of the middle ear and episodes of infection.","definition_xrefs":["DOID:14248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic purulent otitis media","termid":"MONDO:0001920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic atticoantral disease","secondary_identifiers":["ICD9:382.2","UMLS:C0155441","MEDGEN:509967","SCTID:267759006"],"synonyms":[{"name":"chronic atticoantral suppurative otitis media","type":"exact"}],"termid":"MONDO:0001921","xrefs":{"Monarch":{"xref_id":"0001921"}}}


id: PBO:0065303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 16","termid":"PBO:0065303"}


id: PATO:0000600
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A width which is relatively large.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"width","termid":"PATO:0000921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased width","synonyms":[{"name":"broad","type":"related"},{"name":"wide","type":"related"},{"name":"wide/broad","type":"related"}],"termid":"PATO:0000600"}


id: MONDO:1011829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive ataxia with degenerative thoracic myelopathy, non-human animal","secondary_identifiers":["OMIA:000079"],"termid":"MONDO:1011829","xrefs":{"Monarch":{"xref_id":"1011829"}}}


id: PBO:0082661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; bridges interaction between Rna15p and Hrp1p in the CF I complex; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082661"}


id: MONDO:0005472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital heart malformation (obsolete MONDO:0005472)","termid":"MONDO:0005472","xrefs":{"Monarch":{"xref_id":"0005472"}}}


id: PBO:0041239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf100 pseudogene 1","termid":"PBO:0041239"}


id: PR:Q09706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pld1 gene.","definition_xrefs":["UniProtKB:Q09706","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.16c","synonyms":[{"name":"PLD 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pld1","type":"exact"},{"name":"choline phosphatase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphatidylcholine-hydrolyzing phospholipase D1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09706"}


id: GO:0003853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Catalysis of the reaction: a short-chain 2-methyl fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a short-chain (2E)-2-methyl-2-enoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["PMID:10989435","PMID:6401712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acyl-CoA dehydrogenase activity","termid":"GO:0016937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"short-chain 2-methyl fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.5","GO:0047119","KEGG_REACTION:R03169"],"synonyms":[{"name":"2-methyl branched chain acyl-CoA dehydrogenase activity","type":"narrow"},{"name":"2-methyl-branched-chain-enoyl-CoA reductase activity","type":"related"},{"name":"2-methylacyl-CoA dehydrogenase activity","type":"narrow"},{"name":"2-methylbutanoyl-CoA dehydrogenase activity","type":"narrow"},{"name":"2-methylpropanoyl-CoA dehydrogenase activity","type":"narrow"},{"name":"branched-chain acyl-CoA dehydrogenase activity","type":"narrow"},{"name":"isobutyryl-CoA:FAD oxidoreductase activity","type":"narrow"}],"termid":"GO:0003853"}


id: GO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-aspartic acid 1-amide by hydrolysis and oxidation of an interior Asp-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0084"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-aspartic acid amidation (obsolete GO:0018037)","termid":"GO:0018037"}


id: GO:0047294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + sn-glycerol 1-phosphate = diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate.","definition_xrefs":["PMID:8408023","PMID:12801917","PMID:17253090","RHEA:23404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"phosphoglycerol geranylgeranyltransferase activity","secondary_identifiers":["EC:2.5.1.41","MetaCyc:2.5.1.41-RXN","KEGG_REACTION:R04158"],"synonyms":[{"name":"(S)-3-O-geranylgeranylglyceryl phosphate synthase activity","type":"exact"},{"name":"GGGP synthase activity","type":"exact"},{"name":"GGGPS activity","type":"exact"},{"name":"geranylgeranyl diphosphate:sn-glyceryl phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyl-transferase activity","type":"related"},{"name":"glycerol phosphate geranylgeranyltransferase activity","type":"related"}],"termid":"GO:0047294"}


id: PBO:0090187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Mis19 ortholog, syntenic position","termid":"PBO:0090187"}


id: FYPO:0004555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize choline, and therefore requires choline in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for choline","synonyms":[{"name":"choline auxotrophy","type":"exact"},{"name":"growth auxotrophic for choline during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for choline during vegetative growth","type":"exact"}],"termid":"FYPO:0004555"}


id: PBO:0061003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS actin remodeling regulator","termid":"PBO:0061003"}


id: GO:0061783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A catalytic activity that contributes to the degradation of peptidoglycan.","definition_xrefs":["GOC:jh","GOC:dph","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan muralytic activity","termid":"GO:0061783"}


id: PATO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased avidity","termid":"PATO:0002074"}


id: PBO:0028553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_mitotic_interphase,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0028553"}


id: MONDO:0019346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialidosis type 1 (ST-1) is a very rare lysosomal storage disease, and is the normosomatic form of sialidosis, characterized by gait abnormalities, progressive visual loss, bilateral macular cherry red spots and myoclonic epilepsy and ataxia, that usually presents in the second to third decade of life.","definition_xrefs":["Orphanet:812"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"sialidosis","termid":"MONDO:0017734"},{"relation_name":"is_a","term_name":"familial mucolipidosis","termid":"MONDO:0031422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0037792"],"is_obsolete":false,"name":"sialidosis type 1","secondary_identifiers":["UMLS:C0023806","SCTID:723675006","NANDO:2201191","icd11.foundation:1154773192","MEDGEN:44174","SCTID:34960006","NANDO:1200117","GARD:7639"],"synonyms":[{"name":"Normomorphic sialidosis","type":"exact"},{"name":"cherry red spot myoclonus syndrome","type":"related"},{"name":"cherry-red spot-myoclonus syndrome","type":"exact"},{"name":"lipomucopolysaccharidosis","type":"exact"},{"name":"myoclonus cherry red spot syndrome","type":"related"},{"name":"normosomatic sialidosis","type":"exact"},{"name":"sialidosis type I","type":"related"}],"termid":"MONDO:0019346","xrefs":{"Monarch":{"xref_id":"0019346"}}}


id: MONDO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality of the esophagus in which the upper esophagus ends as a blind pouch and does not connect with the lower esophagus; it is often accompanied by a tracheoesophageal fistula. Signs and symptoms in a newborn with this abnormality include excessive salivation, choking, coughing, and the development of cyanosis and respiratory distress when fed.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal atresia","secondary_identifiers":["DOID:10485","ICD9:750.3","UMLS:C0014850","SCTID:26179002","MESH:D004933","HP:0002032","MEDGEN:4545","NCIT:C87072"],"synonyms":[{"name":"congenital atresia of esophagus","type":"exact"},{"name":"congenital atresia of oesophagus","type":"exact"},{"name":"congenital esophageal atresia","type":"exact"},{"name":"congenital imperforate esophagus","type":"exact"},{"name":"congenital imperforate oesophagus","type":"exact"},{"name":"esophageal atresia","type":"exact"},{"name":"esophageal atresia (disease)","type":"exact"},{"name":"imperforate esophagus","type":"exact"},{"name":"imperforate oesophagus","type":"exact"},{"name":"oesophageal atresia","type":"exact"}],"termid":"MONDO:0001044","xrefs":{"Monarch":{"xref_id":"0001044"}}}


id: PBO:0040243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 3","termid":"PBO:0040243"}


id: PBO:0045685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 5","termid":"PBO:0045685"}


id: PBO:0051970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"influenza virus NS1A binding protein","termid":"PBO:0051970"}


id: PBO:0065526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 1","termid":"PBO:0065526"}


id: PBO:0068133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 440","termid":"PBO:0068133"}


id: MONDO:0003517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma which may be cystic; it is composed entirely of well differentiated, adult-type tissues, without evidence of fetal-type tissues.","definition_xrefs":["NCIT:C9015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature teratoma","secondary_identifiers":["DOID:5566","NANDO:2200105","MEDGEN:277967","ONCOTREE:VMT","UMLS:C1368910","ICDO:9080/0","SCTID:254875009"],"synonyms":[{"name":"mature teratoma","type":"exact"}],"termid":"MONDO:0003517","xrefs":{"Monarch":{"xref_id":"0003517"}}}


id: GO:1904124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a microglial cell from one site to another.","definition_xrefs":["PMID:19100238","GOC:BHF","GOC:TermGenie","GOC:nc","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"is_a","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell migration","termid":"GO:1904124"}


id: MONDO:0003667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spermatocytoma (obsolete MONDO:0003667)","termid":"MONDO:0003667","xrefs":{"Monarch":{"xref_id":"0003667"}}}


id: PBO:0049653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 7","termid":"PBO:0049653"}


id: PBO:0044778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD/H-box helicase 60","termid":"PBO:0044778"}


id: PBO:0002665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIE alpha subunit, TFIIEA, Tfa1","termid":"PBO:0002665"}


id: MONDO:0018101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial primary hypomagnesemia with normocalciuria and normocalcemia (FPHNN) is a form of familial primary hypomagnesemia (FPH), characterized by low serum magnesium (Mg) values but inappropriate normal urinary Mg values (i.e. renal hypomagnesemia). The typical symptoms are weakness of the limbs, vertigo, headaches, seizures, brisk tendon reflexes and mild to moderate psychomotor delay.","definition_xrefs":["Orphanet:34527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with normocalcuria","termid":"MONDO:0017626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"familial primary hypomagnesemia with normocalciuria and normocalcemia","secondary_identifiers":["UMLS:C4510731","MEDGEN:1390277","SCTID:725031005"],"termid":"MONDO:0018101","xrefs":{"Monarch":{"xref_id":"0018101"}}}


id: GO:0032012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ARF protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"ARF protein signal transduction","termid":"GO:0032011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ARF protein signal transduction","termid":"GO:0032012"}


id: PBO:0081717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 646","termid":"PBO:0081717"}


id: PBO:0070608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 76","termid":"PBO:0070608"}


id: FYPO:0005251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tellurite (TeO3(2-)) ions. Cells stop growing (and may die) at a concentration of tellurite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to tellurite","synonyms":[{"name":"hypersensitive to tellurite","type":"exact"},{"name":"sensitive to tellurite during mitotic cell cycle","type":"related"},{"name":"sensitive to tellurite during vegetative growth","type":"exact"},{"name":"sensitive to tellurite ions","type":"exact"}],"termid":"FYPO:0005251"}


id: MONDO:0004534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of breast adenosis characterized by the proliferation of small round glands in a collagenous stroma. The epithelial cells are cuboidal and there are no myopepithelial cells present. There is no evidence of atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenosis","termid":"MONDO:0003725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microglandular adenosis of breast","secondary_identifiers":["DOID:8335","UMLS:C1334753","NCIT:C5199","MEDGEN:233705"],"synonyms":[{"name":"breast microglandular adenosis","type":"exact"},{"name":"microglandular adenosis of the breast","type":"exact"}],"termid":"MONDO:0004534","xrefs":{"Monarch":{"xref_id":"0004534"}}}


id: PBO:0113802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog, implicated in DNA metabolism and RNA processing","termid":"PBO:0113802"}


id: PBO:0048710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 2","termid":"PBO:0048710"}


id: GO:0036201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-isokaurene + O2 + NADPH + H+ = ent-2alpha-hydroxyisokaurene + H2O + NADP+.","definition_xrefs":["EC:1.14.14.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ent-isokaurene C2-hydroxylase activity","secondary_identifiers":["RHEA:56336","KEGG_REACTION:R09861"],"termid":"GO:0036201"}


id: PBO:0034451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_from_CRE_promoter_during_cellular_response_to_miconazole","termid":"PBO:0034451"}


id: GO:0009390
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of dimethyl sulfide from dimethyl sulfoxide.","definition_xrefs":["PMID:3280546","PMID:21357619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase complex","synonyms":[{"name":"dimethyl sulphoxide reductase complex","type":"exact"}],"termid":"GO:0009390"}


id: FYPO:0002865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to polypeptone. Cells stop growing (and may die) at a concentration of polypeptone that allows wild type cells to grow. Polypeptone is a mixture of peptones made up of equal parts of pancreatic digest of casein and peptic digest of animal used in media.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to polypeptone","synonyms":[{"name":"hypersensitive to polypeptone","type":"exact"},{"name":"sensitive to polypeptone during mitotic cell cycle","type":"related"},{"name":"sensitive to polypeptone during vegetative growth","type":"exact"}],"termid":"FYPO:0002865"}


id: GO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acyl-D-amino acid = D-amino acid + an acid.","definition_xrefs":["EC:3.5.1.81","MetaCyc:3.5.1.81-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acyl-D-amino-acid deacylase activity","secondary_identifiers":["RHEA:18309"],"synonyms":[{"name":"D-aminoacylase activity","type":"related"},{"name":"N-acyl-D-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0047420"}


id: MONDO:0008933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cephalin lipidosis","secondary_identifiers":["MESH:C565872","MEDGEN:395225","OMIM:212800","UMLS:C1859307"],"synonyms":[{"name":"cephalin lipidosis","type":"exact"}],"termid":"MONDO:0008933","xrefs":{"Monarch":{"xref_id":"0008933"}}}


id: PBO:0016932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR98","termid":"PBO:0016932"}


id: GO:0005921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins.","definition_xrefs":["Wikipedia:Gap_junction","GOC:mtg_muscle","ISBN:0815332181","GOC:mah","PMID:22366062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gap junction","secondary_identifiers":["NIF_Subcellular:sao118541872"],"synonyms":[{"name":"communicating junction","type":"exact"},{"name":"electrical synapse","type":"related"},{"name":"electrotonic synapse","type":"related"},{"name":"gap junction macula","type":"exact"},{"name":"gap junction plaque","type":"exact"},{"name":"intercellular gap junction channel","type":"related"},{"name":"macula communicans","type":"exact"},{"name":"zonula communicans","type":"exact"}],"termid":"GO:0005921"}


id: PBO:0087790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; catalyzes sumoylation of Yku70p/80p and Sir4p promoting telomere anchoring to the nuclear envelope and regulating telomerase activity; DNA-bound form catalyzes a DNA-damaged triggered sumoylation wave resulting in multisite modification of several DNA repair proteins, enhancing interactions between these proteins and accelerating repair; sumoylates Cse4p, a prerequisite for STUbL-mediated Ub-dependent degradation; role in telomere length maintenance","termid":"PBO:0087790"}


id: MONDO:1010849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in which there is a buildup of glycogen due to a lack of the enzyme alpha-glucosidase in Japanese quail.","definition_xrefs":["OMIA:000419-93934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease II, Japanese quail","termid":"MONDO:1010849","xrefs":{"Monarch":{"xref_id":"1010849"}}}


id: GO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}


id: PBO:0071038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 40","termid":"PBO:0071038"}


id: PBO:0046318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1","termid":"PBO:0046318"}


id: PBO:0027918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myriocin_during_mating","termid":"PBO:0027918"}


id: PATO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000473 relative_quality value (obsolete PATO:0000473)","termid":"PATO:0000473"}


id: MONDO:1011318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder, non-human animal","termid":"MONDO:1011301"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing disorder, non-human animal","termid":"MONDO:1011318","xrefs":{"Monarch":{"xref_id":"1011318"}}}


id: GO:0009018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + phosphate = D-fructose + alpha-D-glucose 1-phosphate.","definition_xrefs":["RHEA:24048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"sucrose phosphorylase activity","secondary_identifiers":["EC:2.4.1.7","MetaCyc:SUCROSE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"disaccharide glucosyltransferase activity","type":"broad"},{"name":"sucrose glucosyltransferase activity","type":"related"},{"name":"sucrose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0009018"}


id: MONDO:1010888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in cattle due to a mutation in the CLN5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, cattle","termid":"MONDO:1011568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN5-related, cattle","secondary_identifiers":["OMIA:001482-9913"],"synonyms":[{"name":"CLN5","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 5, cattle","type":"related"}],"termid":"MONDO:1010888","xrefs":{"Monarch":{"xref_id":"1010888"}}}


id: GO:0015576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sorbitol from one side of a membrane to the other. Sorbitol, also known as glucitol, is the hexitol derived by the reduction of the aldehyde group of glucose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sorbitol transmembrane transporter activity","secondary_identifiers":["GO:0015587"],"synonyms":[{"name":"glucitol permease activity","type":"exact"},{"name":"glucitol transporter activity","type":"exact"},{"name":"sorbitol permease activity","type":"exact"}],"termid":"GO:0015576"}


id: GO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane, is directly or indirectly linked to the nuclear membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear matrix organization","termid":"GO:0043578"},{"relation_name":"is_a","term_name":"maintenance of protein location in nucleus","termid":"GO:0051457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear matrix anchoring at nuclear membrane","synonyms":[{"name":"nucleoskeleton anchoring at nuclear membrane","type":"exact"}],"termid":"GO:0090292"}


id: PR:O13786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pep7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar segregation protein pep7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.08","synonyms":[{"name":"Spom972h-pep7","type":"exact"}],"termid":"PR:O13786"}


id: PBO:0079646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2R2 antisense RNA 1","termid":"PBO:0079646"}


id: PBO:0077587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPO antisense RNA 1","termid":"PBO:0077587"}


id: PBO:0062656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 6 pseudogene","termid":"PBO:0062656"}


id: GO:0047587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5alpha-ergosta-7,22-diene-3beta,5-diol = ergosterol + H2O.","definition_xrefs":["EC:4.2.1.62","RHEA:22064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-alpha-hydroxysteroid dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03675","MetaCyc:5-ALPHA-HYDROXYSTEROID-DEHYDRATASE-RXN"],"synonyms":[{"name":"5alpha-ergosta-7,22-diene-3beta,5-diol 5,6-hydro-lyase (ergosterol-forming)","type":"related"},{"name":"5alpha-ergosta-7,22-diene-3beta,5-diol 5,6-hydro-lyase activity","type":"related"},{"name":"5alpha-hydroxysteroid dehydratase activity","type":"related"}],"termid":"GO:0047587"}


id: PBO:0039571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD65 antisense RNA 1","termid":"PBO:0039571"}


id: PBO:0076374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 2","termid":"PBO:0076374"}


id: MONDO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pancreatic ductal adenocarcinoma with poor prognosis. It is characterized by the presence of malignant signet ring cells infiltrating the pancreatic parenchyma in an individual cell pattern.","definition_xrefs":["NCIT:C5720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"},{"relation_name":"is_a","term_name":"pancreatic ductal adenocarcinoma","termid":"MONDO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic signet ring cell adenocarcinoma","secondary_identifiers":["UMLS:C1335317","DOID:3497","MEDGEN:233834"],"synonyms":[{"name":"pancreas signet ring cell carcinoma","type":"exact"},{"name":"pancreatic signet Ring cell carcinoma","type":"exact"},{"name":"pancreatic signet ring cell carcinoma","type":"exact"},{"name":"signet Ring cell carcinoma of pancreas","type":"exact"},{"name":"signet Ring cell carcinoma of the pancreas","type":"exact"}],"termid":"MONDO:0002666","xrefs":{"Monarch":{"xref_id":"0002666"}}}


id: GO:0045443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of juvenile hormones, the three sesquiterpenoid derivatives that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["ISBN:0198547684","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"juvenile hormone secretion","termid":"GO:0045443"}


id: MONDO:0002868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucinous cystic neoplasm that arises from the intrahepatic or extrahepatic bile ducts and it is associated with an invasive carcinomatous component.","definition_xrefs":["NCIT:C4130"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bile duct adenocarcinoma","termid":"MONDO:0003193"},{"relation_name":"excluded_subClassOf","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"bile duct cystadenoma","termid":"MONDO:0003420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"bile duct mucinous cystic neoplasm with an associated invasive carcinoma","secondary_identifiers":["MEDGEN:137737","DOID:4075","UMLS:C0334286","ICDO:8161/3"],"synonyms":[{"name":"bile duct cystadenocarcinoma","type":"exact"},{"name":"bile duct cystadenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"bile duct mucinous cystic neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"biliary cystadenocarcinoma","type":"broad"},{"name":"cystadenocarcinoma of bile duct","type":"exact"},{"name":"cystadenocarcinoma of the bile duct","type":"exact"}],"termid":"MONDO:0002868","xrefs":{"Monarch":{"xref_id":"0002868"}}}


id: PBO:0036497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved calcium-binding protein","termid":"PBO:0036497"}


id: PBO:0087910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA","termid":"PBO:0087910"}


id: PBO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dopey family protein (predicted)","termid":"PBO:0000402"}


id: PBO:0113188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity inorganic phosphate (Pi) transporter; acts upstream of Pho81p in regulation of PHO pathway; targeted to vacuole via AP-3 pathway; expression is independent of Pi concentration and Pho4p activity; contains 12 membrane-spanning segments; PHO87 has a paralog, PHO90, that arose from the whole genome duplication","termid":"PBO:0113188"}


id: GO:0090507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylethylamine that contribute to synaptic transmission.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylethylamine metabolic process","termid":"GO:0042443"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phenylethylamine metabolic process involved in synaptic transmission","termid":"GO:0090507"}


id: PBO:0084929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA binding protein, member of the CCCH zinc finger family; similar to mammalian Tis11 protein, which activates transcription and also has a role in mRNA degradation; functions with Tis11p in regulation of iron homeostasis; CTH1 has a paralog, TIS11, that arose from the whole genome duplication","termid":"PBO:0084929"}


id: GO:0014046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dopamine by a cell. Dopamine is a catecholamine and a precursor of adrenaline and noradrenaline. It acts as a neurotransmitter in the central nervous system but it is also produced peripherally and acts as a hormone.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine transport","termid":"GO:0015872"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"dopamine secretion","termid":"GO:0014046"}


id: PBO:0083737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity","termid":"PBO:0083737"}


id: GO:0009778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic phosphorylation process in which ATP synthesis is driven by a proton gradient generated across the thylakoid membrane. Involves only photosystem I.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic phosphorylation","termid":"GO:0009777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"cyclic photosynthetic phosphorylation","termid":"GO:0009778"}


id: PBO:0005202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase P5 type (predicted)","termid":"PBO:0005202"}


id: FYPO:0007785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested at the G2/MI phase transition. Cells arrested at the G2/MI transition down-even in the presence of nutrients, in contrast with arrest at the mitotic G2/M transition, where cells continue to grow.","definition_xrefs":["PomBase:jh","PMID:28476936","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in meiosis II","termid":"FYPO:0002223"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"},{"name":"abolished growth during meiotic cell cycle arrest at G2/M1","type":"related"}],"termid":"FYPO:0007785"}


id: PBO:0066688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin 3","termid":"PBO:0066688"}


id: PBO:0072665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor","termid":"PBO:0072665"}


id: GO:0003363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell that contributes to the directed self propelled movement of a cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium assembly","termid":"GO:0030032"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"lamellipodium assembly involved in ameboidal cell migration","termid":"GO:0003363"}


id: PBO:0058189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4482","termid":"PBO:0058189"}


id: PBO:0026886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026886"}


id: GO:0061262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle formation","termid":"GO:0072033"},{"relation_name":"part_of","term_name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle formation","synonyms":[{"name":"mesonephros formation","type":"exact"}],"termid":"GO:0061262"}


id: PBO:0054503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1903","termid":"PBO:0054503"}


id: MONDO:0003402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous malignant germ cell tumor arising from the testis. It affects infants, young children, and postpubertal males. It is the most frequently seen testicular neoplasm during childhood. The vast majority of patients present with an asymptomatic scrotal mass. The tumor mimics the yolk sac of the embryo and produces alpha-fetoprotein (AFP). It metastasizes to distant anatomic sites. Prognostic factors relate to the clinical stage and the degree of AFP elevation.","definition_xrefs":["NCIT:C8000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular pure germ cell tumor","termid":"MONDO:0002874"},{"relation_name":"is_a","term_name":"testicular non-seminomatous germ cell cancer","termid":"MONDO:0003403"},{"relation_name":"is_a","term_name":"yolk sac tumor","termid":"MONDO:0005744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular yolk sac tumor","secondary_identifiers":["DOID:5344","MEDGEN:79028","ONCOTREE:TYST","EFO:1000574","UMLS:C0279708"],"synonyms":[{"name":"Orchidoblastoma","type":"related"},{"name":"endodermal sinus neoplasm of testis","type":"related"},{"name":"endodermal sinus neoplasm of the testis","type":"related"},{"name":"endodermal sinus tumor of testis","type":"related"},{"name":"endodermal sinus tumor of the testis","type":"related"},{"name":"endodermal sinus tumour of testis","type":"related"},{"name":"endodermal sinus tumour of the testis","type":"related"},{"name":"endodermal-sinus tumor","type":"related"},{"name":"endodermal-sinus tumour","type":"related"},{"name":"testicular endodermal sinus neoplasm","type":"related"},{"name":"testicular endodermal sinus tumor","type":"related"},{"name":"testicular endodermal sinus tumour","type":"related"},{"name":"testicular yolk Sac neoplasm","type":"exact"},{"name":"testicular yolk sac tumor","type":"exact"},{"name":"testis yolk sac tumor","type":"exact"},{"name":"testis yolk sac tumour","type":"exact"},{"name":"yolk Sac neoplasm of testis","type":"related"},{"name":"yolk Sac neoplasm of the testis","type":"related"},{"name":"yolk Sac tumor of testis","type":"related"},{"name":"yolk Sac tumor of the testis","type":"related"},{"name":"yolk Sac tumour of testis","type":"related"},{"name":"yolk Sac tumour of the testis","type":"related"},{"name":"yolk sac tumor","type":"related"},{"name":"yolk sac tumour","type":"related"}],"termid":"MONDO:0003402","xrefs":{"Monarch":{"xref_id":"0003402"}}}


id: MONDO:0011237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing familial combined hyperlipidemia, in which the cause of the disease is a mutation in the USF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlipidemia, combined, 1","secondary_identifiers":["MESH:C566535","MEDGEN:355434","UMLS:C1865289","OMIM:602491"],"synonyms":[{"name":"USF1 familial combined hyperlipidemia","type":"exact"},{"name":"familial combined hyperlipidemia caused by mutation in USF1","type":"exact"},{"name":"hyperlipidemia, combined, 1","type":"exact"},{"name":"hyperlipidemia, combined, type 1","type":"exact"},{"name":"hyperlipidemia, familial combined, 1","type":"related"},{"name":"hyperlipidemia, familial combined, susceptibility to","type":"exact"},{"name":"hyplip1","type":"related"}],"termid":"MONDO:0011237","xrefs":{"Monarch":{"xref_id":"0011237"}}}


id: MONDO:0018448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clear cell papillary renal cell carcinoma is a rare, indolent subtype of clear cell renal carcinoma, arising from epithelial cells in the renal cortex. It most frequently manifests with a well-circumscribed, well-encapsulated, unicentric, unilateral, small tumor that typically does not metastasize. Clinically it can present with flank or abdominal pain or hematuria, although most patients are usually asymptomatic at the time of diagnosis. Bilateral and/or multifocal presentation should raise the suspicion of von Hippel-Lindau syndrome.","definition_xrefs":["Orphanet:404511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonpapillary renal cell carcinoma","termid":"MONDO:0007763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"clear cell papillary renal cell carcinoma","secondary_identifiers":["ONCOTREE:CCPRC","UMLS:C4518333","GARD:21721","MEDGEN:1388623","SCTID:734015000"],"termid":"MONDO:0018448","xrefs":{"Monarch":{"xref_id":"0018448"}}}


id: PBO:0055395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2825","termid":"PBO:0055395"}


id: GO:0060588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of lipoprotein lipid oxidation. Lipoprotein lipid oxidation is the modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipoprotein oxidation","termid":"GO:0034443"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of lipoprotein lipid oxidation","termid":"GO:0060587"},{"relation_name":"negatively_regulates","term_name":"lipoprotein lipid oxidation","termid":"GO:0034439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein lipid oxidation","termid":"GO:0060588"}


id: GO:2000403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of lymphocyte migration","termid":"GO:2000401"},{"relation_name":"positively_regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte migration","termid":"GO:2000403"}


id: GO:0005126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cytokine receptor.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cytokine receptor binding","synonyms":[{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor binding","type":"exact"},{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor ligand","type":"narrow"}],"termid":"GO:0005126"}


id: PATO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000526 absolute drug sensitivity value (obsolete PATO:0000526)","termid":"PATO:0000526"}


id: PBO:0029917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_squalene_level","termid":"PBO:0029917"}


id: MONDO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatophyte disease of the glabrous skin, excluding the scalp, beard, face, hands, feet, and groin.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea corporis","secondary_identifiers":["SCTID:84849002","MEDGEN:508197","DOID:12179","UMLS:C0040252","ICD10CM:B35.4","ICD9:110.5"],"synonyms":[{"name":"dermatophytosis of the body","type":"exact"},{"name":"dermatophytosis of the trunk","type":"exact"}],"termid":"MONDO:0001461","xrefs":{"Monarch":{"xref_id":"0001461"}}}


id: GO:0102734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: castasterone + O2 + reduced [NADPH--hemoprotein reductase] = brassinolide + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Broad specificity for several brassinosteroids, including castasterone, teasterone, and typhasterol.","definition_xrefs":["EC:1.14.14.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"brassinolide synthase activity","secondary_identifiers":["MetaCyc:RXN-720"],"termid":"GO:0102734"}


id: GO:0042379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chemokine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"},{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"chemokine receptor binding","synonyms":[{"name":"chemokine receptor ligand","type":"narrow"}],"termid":"GO:0042379"}


id: MONDO:0023226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gershinibaruch Leibo syndrome","termid":"MONDO:0023226","xrefs":{"Monarch":{"xref_id":"0023226"}}}


id: PATO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Male quality of having complete, unaltered reproductive organs.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male","termid":"PATO:0000384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intact male","termid":"PATO:0002366"}


id: MONDO:0020286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aortic malformation (obsolete MONDO:0020286)","secondary_identifiers":["Orphanet:98718"],"termid":"MONDO:0020286","xrefs":{"Monarch":{"xref_id":"0020286"}}}


id: PBO:0003585
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pof Six Interacting Protein","termid":"PBO:0003585"}


id: GO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The breakdown of host DNA, deoxyribonucleic acid, by a virus.","definition_xrefs":["GOC:bf","GOC:jl","GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by virus of host DNA (obsolete GO:0039637)","termid":"GO:0039637"}


id: PBO:0041998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 47","termid":"PBO:0041998"}


id: PATO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a disease by virtue of the bearer's duration of an impairment of health or of a condition of abnormal functioning.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duration of disease","termid":"PATO:0001990"}


id: GO:0021531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of radial glial cells. Radial cell precursors differentiate into both neuronal cell types and mature radial glial cells. Mature radial glial cells regulate the axon growth and pathfinding processes that occur during white matter patterning of the developing spinal cord. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GO_REF:0000021","PMID:16185248","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"radial glial cell differentiation","termid":"GO:0060019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord radial glial cell differentiation","synonyms":[{"name":"radial glial cell differentiation in spinal cord","type":"exact"}],"termid":"GO:0021531"}


id: MONDO:0013845
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86059],"is_not":false,"summary":null,"term":"MONDO:0013845"}]},"cv_name":"mondo","definition":"Any auriculocondylar syndrome in which the cause of the disease is a mutation in the PLCB4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auriculocondylar syndrome","termid":"MONDO:0000107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"auriculocondylar syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614669","UMLS:C3553404","GARD:15831","MEDGEN:766318"],"synonyms":[{"name":"ARCND2","type":"related"},{"name":"AURICULOCONDYLAR syndrome 2","type":"related"},{"name":"Auriculocondylar syndrome 2","type":"exact"},{"name":"Auriculocondylar syndrome type 2","type":"exact"},{"name":"PLCB4 auriculocondylar syndrome","type":"exact"},{"name":"auriculocondylar syndrome caused by mutation in PLCB4","type":"exact"}],"termid":"MONDO:0013845","terms_by_termid":{"MONDO:0013845":null},"xrefs":{"Monarch":{"xref_id":"0013845"}}}


id: PBO:0073324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress associated endoplasmic reticulum protein family member 2","termid":"PBO:0073324"}


id: PBO:0029785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_septated_vegetative_cell_with_abnormal_cell_morphology","termid":"PBO:0029785"}


id: PBO:0012018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricil/uridine permese transmembrane transporter family (predicted)","termid":"PBO:0012018"}


id: PBO:0048266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 4","termid":"PBO:0048266"}


id: GO:1901066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of syringal lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin biosynthetic process","termid":"GO:0009809"},{"relation_name":"is_a","term_name":"syringal lignin metabolic process","termid":"GO:1901064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"syringal lignin biosynthetic process","synonyms":[{"name":"S-lignin biosynthetic process","type":"exact"},{"name":"syringal lignin anabolism","type":"exact"},{"name":"syringal lignin biosynthesis","type":"exact"},{"name":"syringal lignin formation","type":"exact"},{"name":"syringal lignin synthesis","type":"exact"}],"termid":"GO:1901066"}


id: PBO:0068494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 78, pseudogene","termid":"PBO:0068494"}


id: GO:0018646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (1S,4R)-1-hydroxy-2-oxolimonene + NADPH + O2 = NADP+ + OH- + (3R)-3-isopropenyl-6-oxoheptanoate.","definition_xrefs":["UM-BBD_reactionID:r0736"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxy-2-oxolimonene 1,2-monooxygenase activity (obsolete GO:0018646)","termid":"GO:0018646"}


id: GO:0009738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of the plant hormone abscisic acid (ABA) to a receptor, and ending with modulation of a cellular process, e.g. transcription.","definition_xrefs":["GOC:sm","GOC:signaling","PMID:24269821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to abscisic acid stimulus","termid":"GO:0071215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"abscisic acid-activated signaling pathway","synonyms":[{"name":"ABA signal transduction","type":"exact"},{"name":"ABA signaling","type":"exact"},{"name":"abscisic acid mediated signalling","type":"exact"},{"name":"abscisic acid signal transduction","type":"related"},{"name":"abscisic acid-mediated signaling pathway","type":"related"}],"termid":"GO:0009738"}


id: PBO:0065660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRJ antisense RNA 1","termid":"PBO:0065660"}


id: PBO:0061733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin","termid":"PBO:0061733"}


id: SO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a 7SK RNA (SO:0002340).","definition_xrefs":["PMID:19246988","PMID:27369380","PMID:21853533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_7SK_gene","synonyms":[{"name":"7SK RNA gene","type":"exact"},{"name":"RNA 7SK gene","type":"exact"}],"termid":"SO:0002341"}


id: PBO:0006169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exists_during","termid":"PBO:0006169"}


id: PR:Q9P7M6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.12 gene.","definition_xrefs":["UniProtKB:Q9P7M6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hid-1 family protein P27G11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.12","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAP27G11.12","type":"exact"}],"termid":"PR:Q9P7M6"}


id: FYPO:0008214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of pre-mRNA measured in a cell during a cellular response to heat is lower than normal. Total pre-mRNA or a specific pre-mRNA may be affected.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to heat","termid":"FYPO:0002287"},{"relation_name":"is_a","term_name":"decreased pre-mRNA level","termid":"FYPO:0002937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased pre-mRNA level during cellular response to heat","termid":"FYPO:0008214"}


id: GO:0045688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antipodal cell differentiation","termid":"GO:0045688"}


id: PBO:0029465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vacuolated_vegetative_cell","termid":"PBO:0029465"}


id: GO:0010884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of lipid localization","termid":"GO:1905954"},{"relation_name":"positively_regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid storage","synonyms":[{"name":"positive regulation of lipid sequestration","type":"narrow"}],"termid":"GO:0010884"}


id: FYPO:0004043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"tetranucleate vegetative cell","synonyms":[{"name":"tetranucleate cells during vegetative growth","type":"exact"},{"name":"tetranucleate during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004043"}


id: GO:0031612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex located in the cytosol of the cell.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, base subcomplex","termid":"GO:0008540"},{"relation_name":"part_of","term_name":"cytosolic proteasome regulatory particle","termid":"GO:0031600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cytosolic proteasome regulatory particle, base subcomplex","termid":"GO:0031612"}


id: MONDO:1010475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, cattle","secondary_identifiers":["OMIA:000795-9913"],"termid":"MONDO:1010475","xrefs":{"Monarch":{"xref_id":"1010475"}}}


id: GO:0061534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gamma-aminobutyric acid by a cell, in which the gamma-aminobutyric acid acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"},{"relation_name":"part_of","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"gamma-aminobutyric acid secretion, neurotransmission","termid":"GO:0061534"}


id: PBO:0070827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 6","termid":"PBO:0070827"}


id: GO:0016899
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003885"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.1.3.-"],"termid":"GO:0016899","terms_by_termid":{"GO:0003885":null}}


id: PR:Q9URV8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC106.03 gene.","definition_xrefs":["UniProtKB:Q9URV8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0744 protein C106.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.03","synonyms":[{"name":"Spom972h-SPBC106.03","type":"exact"}],"termid":"PR:Q9URV8"}


id: PBO:0069081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 328, pseudogene","termid":"PBO:0069081"}


id: GO:0009483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.9.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete caa3-type cytochrome c oxidase (obsolete GO:0009483)","synonyms":[{"name":"caa3-type cytochrome c oxidase","type":"exact"}],"termid":"GO:0009483"}


id: PBO:0109320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, human endophilin A1-like ortholog","termid":"PBO:0109320"}


id: PBO:0027545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_motility","termid":"PBO:0027545"}


id: MONDO:0017039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug or radiation exposure-related interstitial lung disease","secondary_identifiers":["Orphanet:264978","GARD:20942","MEDGEN:1843006","UMLS:C5680746"],"termid":"MONDO:0017039","xrefs":{"Monarch":{"xref_id":"0017039"}}}


id: SO:0000987
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of a nucleotide polymer that has a 3'-terminal residue and a 5'-terminal residue.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topology_attribute","termid":"SO:0000986"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear","synonyms":[{"name":"two-ended","type":"related"}],"termid":"SO:0000987"}


id: PBO:0087594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; involved in the cellular stress response; similar to S. pombe Tti2p; may interact with Rsm23p; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0087594"}


id: GO:0060064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the anterior end of the primitive streak of the embryo that acts as the main signaling center establishing the body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the anterior end of the primitive streak","synonyms":[{"name":"Spemann organizer formation in amniotes","type":"related"},{"name":"Spemann's organizer formation at the anterior end of the primitive streak","type":"exact"},{"name":"Spemann-Mangold organizer formation at the anterior end of the primitive streak","type":"related"}],"termid":"GO:0060064"}


id: FYPO:0006419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which sites at which the protein Rad51 accumulates remain present for longer than normal during the meiotic cell cycle. Normally, Rad51 foci form during prophase I but disappear before metaphase I.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of Rad51 focus presence during meiotic cell cycle","synonyms":[{"name":"prolonged Rad51 focus presence during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006419"}


id: PBO:0052376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20A","termid":"PBO:0052376"}


id: MOD:00003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Entry from Unimod.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized protein modification","termid":"MOD:00032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unimod","termid":"MOD:00003"}


id: MONDO:0031000
data:
  {"annotated_genes":["SJAG_00303","SJAG_00336","SJAG_03542"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86580,86581,86582],"is_not":false,"summary":null,"term":"MONDO:0031000"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tessadori-Van-Haaften neurodevelopmental syndrome","termid":"MONDO:0031400"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00303":null,"SJAG_00336":null,"SJAG_03542":null},"genotype_count":0,"is_obsolete":false,"name":"Tessadori-Van Haaften neurodevelopmental syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1804234","UMLS:C5677016","OMIM:619951"],"synonyms":[{"name":"TEVANED4","type":"exact"},{"name":"Tessadori-Van Haaften neurodevelopmental syndrome 4","type":"exact"}],"termid":"MONDO:0031000","terms_by_termid":{"MONDO:0031000":null},"xrefs":{"Monarch":{"xref_id":"0031000"}}}


id: FYPO:0002508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"decreased protein palmitoylation","termid":"FYPO:0002505"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein palmitoylation during vegetative growth","synonyms":[{"name":"decreased protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"reduced protein palmitoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002508"}


id: PBO:0028884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_methylation","termid":"PBO:0028884"}


id: MONDO:0015190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leiomyosarcoma of small intestine (obsolete MONDO:0015190)","termid":"MONDO:0015190","xrefs":{"Monarch":{"xref_id":"0015190"}}}


id: PBO:0067864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 166","termid":"PBO:0067864"}


id: FYPO:0001130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"increased protein localization to nucleus","termid":"FYPO:0004456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to nucleus during vegetative growth","synonyms":[{"name":"increased protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"increased protein localization to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001130"}


id: GO:0032956
data:
  {"annotated_genes":["SJAG_01894","SJAG_01821","SJAG_04100","SJAG_03486","SJAG_03048","SJAG_04666","SJAG_04479","SJAG_02366","SJAG_02684","SJAG_01320","SJAG_00610","SJAG_02700","SJAG_03655","SJAG_02566","SJAG_02592","SJAG_00082","SJAG_01993","SJAG_01774","SJAG_00279","SJAG_04522","SJAG_01826","SJAG_03086","SJAG_02392","SJAG_05000","SJAG_00424","SJAG_00521","SJAG_03455","SJAG_01805","SJAG_04597","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71196,72906,72922,73796,77468,77641,78686,95617,99233,102632,109902,115127,116295],"is_not":false,"summary":null,"term":"GO:0032956"},{"annotations":[75373,78904,79807,92083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[74180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[98061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[102155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[89746,94170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[107414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[66691,76482,77019,79053,67576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[93568,118958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based process","termid":"GO:0032970"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"regulates","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00279":null,"SJAG_00424":null,"SJAG_00521":null,"SJAG_00610":null,"SJAG_01320":null,"SJAG_01774":null,"SJAG_01805":null,"SJAG_01821":null,"SJAG_01826":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02566":null,"SJAG_02592":null,"SJAG_02684":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_03486":null,"SJAG_03655":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of actin cytoskeleton organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of actin cytoskeleton organisation","type":"exact"},{"name":"regulation of actin cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0032956","terms_by_termid":{"GO:0030833":null,"GO:0032231":null,"GO:0032956":null,"GO:0034316":null,"GO:0051016":null,"GO:0120306":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: GO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydroxylation of C-25 of any form of vitamin D.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete vitamin D 25-hydroxylase activity (obsolete GO:0070643)","synonyms":[{"name":"calciferol 25-hydroxylase activity","type":"narrow"},{"name":"cholecalciferol 25-hydroxylase activity","type":"narrow"},{"name":"ergocalciferol 25-hydroxylase activity","type":"narrow"},{"name":"vitamin D2 25-hydroxylase activity","type":"narrow"}],"termid":"GO:0070643"}


id: MONDO:0019345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Shigellosis is a bacterial infection leading to dysentery and is caused by Shigella, which are small, ubiquitous Gram-negative bacteria belonging to the enterobacteria family. There are four species: S. dysenteriae, S. flexneri, S. boydii and S. sonnei, all of which cause bacillary dysentery and are strictly limited to human hosts.","definition_xrefs":["Orphanet:810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"dysentery","termid":"MONDO:0001517"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"shigellosis","secondary_identifiers":["EFO:0005585","icd11.foundation:2080365623","ICD9:004.0","ICD9:004","ICD9:004.1","NCIT:C157978","SCTID:36188001","ICD9:004.9","MedDRA:10017915","MEDGEN:8513","DOID:12385","ICD10CM:A03","ICD9:004.2","UMLS:C0013371","GARD:4818","ICD9:004.3","MedDRA:10054178","MESH:D004405"],"synonyms":[{"name":"Shigella boydii infectious disease","type":"narrow"},{"name":"Shigella dysentery","type":"related"},{"name":"Shigella flexneri infectious disease","type":"narrow"},{"name":"Shigella gastroenteritis","type":"exact"},{"name":"Shigella sonnei infectious disease","type":"narrow"},{"name":"bacillary dysentery","type":"exact"},{"name":"flexner's dysentery","type":"related"},{"name":"japanese dysentery","type":"related"},{"name":"shigellosis","type":"exact"}],"termid":"MONDO:0019345","xrefs":{"Monarch":{"xref_id":"0019345"}}}


id: FYPO:0006458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone modification","termid":"FYPO:0006458"}


id: PBO:0050174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 30","termid":"PBO:0050174"}


id: GO:0061349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac right atrium.","definition_xrefs":["GOC:dph","GOC:mtg_heart","PMID:19056682"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in cardiac right atrium morphogenesis (obsolete GO:0061349)","termid":"GO:0061349"}


id: PBO:0066872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 172","termid":"PBO:0066872"}


id: PBO:0086964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory light chain for the type II myosin Myo1p; binds to an IQ motif of Myo1p, localization to the bud neck depends on Myo1p; involved in the disassembly of the Myo1p ring","termid":"PBO:0086964"}


id: GO:0032398
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of a MHC class Ib alpha chain and, in most cases, an invariant beta2-microglobin chain, and with or without a bound peptide or lipid antigen. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["ISBN:0781735149","PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"MHC class Ib protein complex","termid":"GO:0032398"}


id: GO:0031405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoic acid, 1,2-dithiolane-3-pentanoic acid.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipoic acid binding","termid":"GO:0031405"}


id: GO:2000439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular extravasation","termid":"GO:0002693"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of monocyte extravasation","termid":"GO:2000437"},{"relation_name":"positively_regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte extravasation","termid":"GO:2000439"}


id: PATO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of being covered with short, dense, matted hairs.","definition_xrefs":["thefreedictionary:www.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tomentose","termid":"PATO:0002341"}


id: PBO:0084465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase-responsive inhibitor of the Ste12p transcription factor; involved in the regulation of mating-specific genes and the invasive growth pathway; related regulators Dig1p and Dig2p bind to Ste12p; DIG1 has a paralog, DIG2, that arose from the whole genome duplication","termid":"PBO:0084465"}


id: GO:0140700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(3'-5')A-P(2'-5') (cyclic 3',2' GAMP).","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic GMP-AMP synthase activity","termid":"GO:0140699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP synthase activity","synonyms":[{"name":"3',2' cyclic-GMP-AMP synthase activity","type":"exact"},{"name":"3',2'-cyclic GAMP synthase activity","type":"exact"}],"termid":"GO:0140700"}


id: PBO:0034392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_tributary_of","termid":"PBO:0034392"}


id: GO:0045850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nurse cell apoptotic process.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nurse cell apoptotic process","termid":"GO:0045477"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"nurse cell apoptotic process","termid":"GO:0045476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nurse cell apoptotic process","synonyms":[{"name":"activation of nurse cell apoptosis","type":"narrow"},{"name":"positive regulation of nurse cell apoptosis","type":"narrow"},{"name":"stimulation of nurse cell apoptosis","type":"narrow"},{"name":"up regulation of nurse cell apoptosis","type":"exact"},{"name":"up-regulation of nurse cell apoptosis","type":"exact"},{"name":"upregulation of nurse cell apoptosis","type":"exact"}],"termid":"GO:0045850"}


id: PBO:0075556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spen family transcriptional repressor","termid":"PBO:0075556"}


id: GO:1990567
data:
  {"annotated_genes":["SJAG_01599","SJAG_03126","SJAG_03500"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100084,111748,118028],"is_not":false,"summary":null,"term":"GO:1990567"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex that in S. pombe consists of the proteins Dis2, Ppn1, and Swd22.","definition_xrefs":["PMID:24945319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01599":null,"SJAG_03126":null,"SJAG_03500":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DPS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990567","terms_by_termid":{"GO:1990567":null}}


id: PBO:0089683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo-type fold protein, DUF1941 family protein","termid":"PBO:0089683"}


id: PBO:0054079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1429","termid":"PBO:0054079"}


id: PBO:0072601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSF1 intronic transcript 2","termid":"PBO:0072601"}


id: GO:1902687
data:
  {"annotated_genes":["SJAG_03535","SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78171,76501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017177"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of glucosidase activity.","definition_xrefs":["PMID:23826932","GO_REF:0000088","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03280":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glucosidase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1902687","terms_by_termid":{"GO:0017177":null}}


id: GO:0070381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transport vesicle that mediates transport from the endosome to the plasma membrane, and fuses with the plasma membrane to deliver lipids and membrane proteins to the plasma membrane and to release various cargo molecules, such as proteins or hormones, by exocytosis.","definition_xrefs":["GOC:mah","GOC:kad","PMID:10679016","PMID:12110576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicle","termid":"GO:0070382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"endosome to plasma membrane transport vesicle","synonyms":[{"name":"endosome to plasma membrane constitutive secretory pathway transport vesicle","type":"exact"},{"name":"endosome-plasma membrane transport vesicle","type":"exact"}],"termid":"GO:0070381"}


id: PBO:0065502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraspeckle component 1","termid":"PBO:0065502"}


id: PBO:0060604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit H2","termid":"PBO:0060604"}


id: GO:0061431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methionine stimulus.","definition_xrefs":["PMID:7891681","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to methionine","termid":"GO:1904640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methionine","termid":"GO:0061431"}


id: GO:0050027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-idonate + NADP+ = 5-dehydro-D-gluconate + NADPH.","definition_xrefs":["MetaCyc:L-IDONATE-2-DEHYDROGENASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete L-idonate 2-dehydrogenase activity (obsolete GO:0050027)","synonyms":[{"name":"5-keto-D-gluconate 2-reductase activity","type":"related"},{"name":"5-ketogluconate 2-reductase activity","type":"related"},{"name":"5-ketoglucono-idono-reductase activity","type":"related"},{"name":"5KGR","type":"related"},{"name":"L-idonate 2-dehydrogenase activity","type":"exact"},{"name":"L-idonate dehydrogenase activity","type":"related"},{"name":"L-idonate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"reductase, 5-ketogluconate 5- (L-idonate-forming)","type":"related"}],"termid":"GO:0050027"}


id: GO:0042464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X:autosome chromosome ratios between sexes by an inactivation of a proportion of genes on both of the X chromosomes of the XX sex, leading to a decrease, of half, of the levels of gene expression from these chromosomes. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mr","PMID:11102361","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"dosage compensation by hypoactivation of X chromosome","secondary_identifiers":["Wikipedia:XY_sex-determination_system"],"termid":"GO:0042464"}


id: GO:1905737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-proline import across plasma membrane.","definition_xrefs":["PMID:24344203","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proline import across plasma membrane","termid":"GO:1902836"},{"relation_name":"is_a","term_name":"regulation of L-proline import across plasma membrane","termid":"GO:1905735"},{"relation_name":"positively_regulates","term_name":"L-proline import across plasma membrane","termid":"GO:1904271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-proline import across plasma membrane","termid":"GO:1905737"}


id: MONDO:0013437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PDE6A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PDE6A-related retinopathy","termid":"MONDO:0700224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 43","secondary_identifiers":["MEDGEN:462489","GARD:15716","UMLS:C3151139","OMIM:613810","DOID:0110379","ICD10CM:H35.5"],"synonyms":[{"name":"PDE6A retinitis pigmentosa","type":"exact"},{"name":"RP43","type":"exact"},{"name":"retinitis pigmentosa 43","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PDE6A","type":"exact"},{"name":"retinitis pigmentosa type 43","type":"exact"}],"termid":"MONDO:0013437","xrefs":{"Monarch":{"xref_id":"0013437"}}}


id: GO:0050256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol 5-phosphate + NAD(P)+ = D-ribulose 5-phosphate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribitol-5-phosphate 2-dehydrogenase [(NAD(P)+] activity","secondary_identifiers":["MetaCyc:RIBITOL-5-PHOSPHATE-2-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-ribitol-5-phosphate:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"dehydrogenase, ribitol 5-phosphate","type":"related"}],"termid":"GO:0050256"}


id: SO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A reading_frame that is interrupted by one or more stop codons; usually identified through inter-genomic sequence comparisons.","definition_xrefs":["SGD:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blocked_reading_frame","synonyms":[{"name":"blocked reading frame","type":"exact"}],"termid":"SO:0000718"}


id: PBO:0034657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_3'_overhang_length","termid":"PBO:0034657"}


id: FYPO:0003285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is lower than normal during a cellular response to nutrient.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased alpha,alpha-trehalase activity during cellular response to nutrient","synonyms":[{"name":"decreased neutral trehalase activity during cellular response to nutrient","type":"exact"},{"name":"decreased trehalase activity during cellular response to nutrient","type":"broad"},{"name":"reduced alpha,alpha-trehalase activity during cellular response to nutrient","type":"exact"}],"termid":"FYPO:0003285"}


id: MONDO:0004260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Penetration of a peptic ulcer through the wall of duodenum or stomach allowing the leakage of luminal contents into the peritoneal cavity.","definition_xrefs":["MESH:D010439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptic ulcer disease","termid":"MONDO:0004247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"peptic ulcer perforation","secondary_identifiers":["SCTID:79118000","UMLS:C0030925","EFO:1001389","MEDGEN:45385","DOID:752"],"synonyms":[{"name":"acute peptic ulcer with perforation","type":"exact"},{"name":"peptic ulcer with perforation","type":"exact"},{"name":"perforated peptic ulcer","type":"exact"}],"termid":"MONDO:0004260","xrefs":{"Monarch":{"xref_id":"0004260"}}}


id: PBO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Hsr1","termid":"PBO:0001257"}


id: MONDO:0027664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chemotherapy-induced toxicity","termid":"MONDO:0800390"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cisplatin toxicity","secondary_identifiers":["Orphanet:240863"],"termid":"MONDO:0027664","xrefs":{"Monarch":{"xref_id":"0027664"}}}


id: PBO:0046898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 21 member E, pseudogene","termid":"PBO:0046898"}


id: GO:0047826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine = (2R,5S)-2,5-diaminohexanoate and (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate.","definition_xrefs":["EC:5.4.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-lysine 5,6-aminomutase activity","secondary_identifiers":["MetaCyc:BETA-LYSINE-56-AMINOMUTASE-RXN","KEGG_REACTION:R02852"],"synonyms":[{"name":"adenosylcobalamin-dependent D-lysine 5,6-aminomutase activity","type":"related"},{"name":"lysine 5,6-aminomutase activity","type":"related"}],"termid":"GO:0047826"}


id: MONDO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aortic disease that is characterized by an absence of an opening from the left ventricle of the heart into the aorta.","definition_xrefs":["DOID:14037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aorta atresia","secondary_identifiers":["ICD9:747.22","ICD10CM:Q25.2","SCTID:204431007","UMLS:C0345010","MEDGEN:576689"],"synonyms":[{"name":"atresia and stenosis of aorta","type":"exact"},{"name":"congenital atresia and stenosis of aorta","type":"exact"}],"termid":"MONDO:0001863","xrefs":{"Monarch":{"xref_id":"0001863"}}}


id: GO:0106368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + dTTP = a 2'-deoxyribonucleoside 5'-diphosphate + dTDP.","definition_xrefs":["RHEA:62132","PMID:20497505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"deoxynucleoside phosphate kinase activity, dTTP as phosphate donor","termid":"GO:0106368"}


id: GO:0003073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the force with which blood travels through the systemic arterial circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}


id: PBO:0088124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity; involved in control of cytosolic Ca2+ and K+ concentrations; has similarity to sodium/calcium exchangers, including the bovine Na+/Ca2+,K+ antiporter","termid":"PBO:0088124"}


id: MONDO:0019566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Klippel-Trenaunay syndrome (obsolete MONDO:0019566)","termid":"MONDO:0019566","xrefs":{"Monarch":{"xref_id":"0019566"}}}


id: MONDO:0016282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm with skeletal muscle differentiation arising from the cervix.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"},{"relation_name":"is_a","term_name":"sarcoma of cervix uteri","termid":"MONDO:0016280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rhabdomyosarcoma of the cervix uteri","secondary_identifiers":["Orphanet:213802","UMLS:C4289809","GARD:20494","SCTID:763408003","MEDGEN:927341","ICD10CM:C53.0","NCIT:C128048","ONCOTREE:CERMS"],"synonyms":[{"name":"CERMS","type":"related"},{"name":"cervical rhabdomyosarcoma","type":"exact"},{"name":"rhabdomyosarcoma (disease) of uterine cervix","type":"exact"},{"name":"uterine cervix rhabdomyosarcoma","type":"exact"},{"name":"uterine cervix rhabdomyosarcoma (disease)","type":"exact"}],"termid":"MONDO:0016282","xrefs":{"Monarch":{"xref_id":"0016282"}}}


id: MONDO:0016666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unexplained long-lasting fever/inflammatory syndrome","secondary_identifiers":["Orphanet:251332","GARD:20699","MEDGEN:1842329","UMLS:C5679630"],"termid":"MONDO:0016666","xrefs":{"Monarch":{"xref_id":"0016666"}}}


id: GO:0043364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the activation of an enzyme by generating an organic free radical on a glycine residue via a homolytic cleavage of S-adenosyl-L-methionine (SAM).","definition_xrefs":["GOC:jl","PMID:24486374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycyl-radical enzyme activating activity","secondary_identifiers":["EC:1.97.1.-"],"synonyms":[{"name":"catalysis of free radical formation","type":"broad"}],"termid":"GO:0043364"}


id: GO:0045497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the analia of the female over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia development","termid":"GO:0007487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female analia development","termid":"GO:0045497"}


id: PBO:0077568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 274, pseudogene","termid":"PBO:0077568"}


id: MONDO:0014214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in compound heterozygous mutation in the WDR60 gene on chromosome 7q36.","definition_xrefs":["PMID:23910462","DOID:0110094"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"asphyxiating thoracic dystrophy 3","termid":"MONDO:0013127"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 8 with or without polydactyly","secondary_identifiers":["OMIM:615503","UMLS:C3809691","MEDGEN:816021","GARD:15975"],"synonyms":[{"name":"SRPS6","type":"exact"},{"name":"SRTD8","type":"exact"},{"name":"short rib-polydactyly syndrome type VI","type":"exact"},{"name":"short rib-polydactyly syndrome, type 6","type":"related"},{"name":"short-rib thoracic dysplasia 8 with or without polydactyly","type":"exact"}],"termid":"MONDO:0014214","xrefs":{"Monarch":{"xref_id":"0014214"}}}


id: PR:Q09712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi18 gene.","definition_xrefs":["UniProtKB:Q09712","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.05","synonyms":[{"name":"GPI mannosyltransferase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpi18","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09712"}


id: GO:0009299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular synthesis of messenger RNA (mRNA) from a DNA template.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"mRNA transcription","secondary_identifiers":["GO:0061023"],"synonyms":[{"name":"cellular mRNA transcription","type":"exact"},{"name":"mRNA biosynthesis","type":"broad"},{"name":"mRNA biosynthetic process","type":"broad"},{"name":"mRNA synthesis","type":"broad"}],"termid":"GO:0009299"}


id: PBO:0040718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL9 transcription coactivator","termid":"PBO:0040718"}


id: MONDO:0007720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hernia, double inguinal","secondary_identifiers":["OMIM:142350","MEDGEN:163567","UMLS:C0860251","MESH:C563164"],"synonyms":[{"name":"hernia, double inguinal","type":"exact"}],"termid":"MONDO:0007720","xrefs":{"Monarch":{"xref_id":"0007720"}}}


id: PBO:0055462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2895","termid":"PBO:0055462"}


id: PBO:0049302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 3 pseudogene 2","termid":"PBO:0049302"}


id: GO:0005320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein (obsolete GO:0005320)","synonyms":[{"name":"apolipoprotein","type":"exact"}],"termid":"GO:0005320"}


id: GO:0046232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbazole metabolic process","termid":"GO:0018884"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbazole catabolic process","synonyms":[{"name":"carbazole breakdown","type":"exact"},{"name":"carbazole catabolism","type":"exact"},{"name":"carbazole degradation","type":"exact"}],"termid":"GO:0046232"}


id: PBO:0053490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 467","termid":"PBO:0053490"}


id: FYPO:0000071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aureobasidin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to aureobasidin A","synonyms":[{"name":"resistance to AbA","type":"exact"},{"name":"resistance to aureobasidin A during mitotic cell cycle","type":"related"},{"name":"resistance to aureobasidin A during vegetative growth","type":"exact"},{"name":"resistant to aureobasidin A","type":"exact"}],"termid":"FYPO:0000071"}


id: MONDO:0019457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia secondary to a myelodysplastic syndrome or therapy-related. (WHO, 2001)","definition_xrefs":["NCIT:C25765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"therapy related acute myeloid leukemia and myelodysplastic syndrome","secondary_identifiers":["MEDGEN:220954","GARD:12762","icd11.foundation:1581599493","Orphanet:86846","SCTID:721306009","UMLS:C1292776"],"synonyms":[{"name":"Secondary AGL","type":"exact"},{"name":"Secondary Acute granulocytic Leukaemia","type":"exact"},{"name":"Secondary Acute granulocytic Leukemia","type":"exact"},{"name":"Secondary Acute myeloblastic Leukaemia","type":"exact"},{"name":"Secondary Acute myeloblastic Leukemia","type":"exact"},{"name":"Secondary Acute myelocytic Leukaemia","type":"exact"},{"name":"Secondary Acute myelocytic Leukemia","type":"exact"},{"name":"Secondary Acute myelogenous Leukaemia","type":"exact"},{"name":"Secondary Acute myelogenous Leukemia","type":"exact"},{"name":"Secondary Acute myeloid Leukaemia (AML)","type":"exact"},{"name":"Secondary Acute myeloid Leukemia (AML)","type":"exact"},{"name":"secondary AML","type":"exact"},{"name":"secondary acute myeloid leukaemia","type":"exact"},{"name":"secondary acute myeloid leukemia","type":"exact"},{"name":"therapy-related AML and myelodysplastic syndrome","type":"exact"}],"termid":"MONDO:0019457","xrefs":{"Monarch":{"xref_id":"0019457"}}}


id: GO:1905002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane repolarization during atrial cardiac muscle cell action potential.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","PMID:21098446","GOC:rph","GOC:BHF","GOC:TermGenie","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization during atrial cardiac muscle cell action potential","termid":"GO:1905000"},{"relation_name":"is_a","term_name":"positive regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905033"},{"relation_name":"positively_regulates","term_name":"membrane repolarization during atrial cardiac muscle cell action potential","termid":"GO:0098914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane repolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"activation of atrial repolarization","type":"related"},{"name":"activation of electrocardiogram QRS complex","type":"related"},{"name":"activation of membrane repolarization during atrial cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of atrial repolarization","type":"related"},{"name":"positive regulation of electrocardiogram QRS complex","type":"related"},{"name":"up regulation of atrial repolarization","type":"related"},{"name":"up regulation of electrocardiogram QRS complex","type":"related"},{"name":"up regulation of membrane repolarization during atrial cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of atrial repolarization","type":"related"},{"name":"up-regulation of electrocardiogram QRS complex","type":"related"},{"name":"up-regulation of membrane repolarization during atrial cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of atrial repolarization","type":"related"},{"name":"upregulation of electrocardiogram QRS complex","type":"related"},{"name":"upregulation of membrane repolarization during atrial cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905002"}


id: FYPO:0006281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased in centromeric regions.","definition_xrefs":["PomBase:mah","PMID:28977643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic recombination at centromere","termid":"FYPO:0006281"}


id: GO:0046855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing a phosphate group from any mono- or polyphosphorylated inositol.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol phosphate dephosphorylation (obsolete GO:0046855)","synonyms":[{"name":"myo-inositol phosphate dephosphorylation","type":"narrow"}],"termid":"GO:0046855"}


id: PBO:0081395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 234","termid":"PBO:0081395"}


id: MONDO:0030312
data:
  {"annotated_genes":["SJAG_00380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86319],"is_not":false,"summary":null,"term":"MONDO:0030312"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 29","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070410","MEDGEN:1788435","OMIM:619389","UMLS:C5543595"],"synonyms":[{"name":"Barakat-Van Ham-Kaya syndrome","type":"exact"},{"name":"SCAR29","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia and cerebellar ataxia","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 29","type":"exact"}],"termid":"MONDO:0030312","terms_by_termid":{"MONDO:0030312":null},"xrefs":{"Monarch":{"xref_id":"0030312"}}}


id: PBO:0052162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 10","termid":"PBO:0052162"}


id: MONDO:0032645
data:
  {"annotated_genes":["SJAG_03930"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86012],"is_not":false,"summary":null,"term":"MONDO:0032645"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03930":null},"genotype_count":0,"is_obsolete":false,"name":"trichohepatoneurodevelopmental syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648322","UMLS:C4748898","OMIM:618268"],"synonyms":[{"name":"THNS","type":"related"},{"name":"TRICHOHEPATONEURODEVELOPMENTAL SYNDROME","type":"related"}],"termid":"MONDO:0032645","terms_by_termid":{"MONDO:0032645":null},"xrefs":{"Monarch":{"xref_id":"0032645"}}}


id: PR:Q50HP3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc19 gene.","definition_xrefs":["UniProtKB:Q50HP3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit spc19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.15c","synonyms":[{"name":"Spom972h-spc19","type":"exact"},{"name":"outer kinetochore protein spc19 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q50HP3"}


id: GO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylic acid + UDP-glucose = salicylic acid glucose ester + UDP.","definition_xrefs":["MetaCyc:RXN-11659","RHEA:62316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"salicylic acid glucosyltransferase (ester-forming) activity","synonyms":[{"name":"UDP:glucose:2-hydroxybenzoic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:SA glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylate glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"salicylic acid glucosyltransferase activity","type":"broad"}],"termid":"GO:0052639"}


id: GO:0047172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + coumaroyl-CoA = 4-coumaroylshikimate + CoA.","definition_xrefs":["MetaCyc:2.3.1.133-RXN","EC:2.3.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"shikimate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["RHEA:12124"],"synonyms":[{"name":"4-coumaroyl-CoA:shikimate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"shikimate hydroxycinnamoyltransferase activity","type":"related"}],"termid":"GO:0047172"}


id: PBO:0076036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 33","termid":"PBO:0076036"}


id: GO:0075513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any caveolin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins when material is taken up into plasma membrane caveolae - specialized lipid rafts that form 50-70 nm flask-shaped invaginations of the plasma membrane - which then pinch off to form endocytic caveolar carriers containing the virus.","definition_xrefs":["VZ:976","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis of virus by host cell","termid":"GO:0019065"},{"relation_name":"is_a","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"caveolin-mediated endocytosis of virus by host cell","synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis","type":"exact"},{"name":"viral entry into host cell via caveolin-mediated endocytosis","type":"related"},{"name":"viral penetration via caveolae-mediated endocytosis followed by endosome disruption","type":"exact"}],"termid":"GO:0075513"}


id: PBO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0036023"}


id: MONDO:0017719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of autosomal recessive lysosomal storage disorders marked by the accumulation of gangliosides. They are caused by impaired enzymes or defective cofactors required for normal ganglioside degradation in the lysosomes. Gangliosidoses are classified by the specific ganglioside accumulated in the defective degradation pathway.","definition_xrefs":["MESH:D005733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"gangliosidosis","secondary_identifiers":["MEDGEN:42149","GARD:12510","DOID:2368","SCTID:50967008","Orphanet:309144","UMLS:C0017083","icd11.foundation:797306953"],"termid":"MONDO:0017719","xrefs":{"Monarch":{"xref_id":"0017719"}}}


id: GO:0090349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of organohalogen metabolic process","termid":"GO:0090347"},{"relation_name":"negatively_regulates","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organohalogen metabolic process","termid":"GO:0090349"}


id: MOD:00934
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Levuglandinyl - arginine hydroxylactam adduct","synonyms":[{"name":"LG-Hlactam-R","type":"related"},{"name":"Levuglandinyl - arginine hydroxylactam adduct","type":"related"}],"termid":"MOD:00934"}


id: FYPO:0005832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cortex of the cell tip is abnormal. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah","GO:0099110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule during vegetative growth","termid":"FYPO:0005830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein transport along microtubule to cell tip cortex during vegetative growth","synonyms":[{"name":"abnormal protein movement along microtubule to cell tip cortex during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule to cell tip cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005832"}


id: MONDO:0009624
data:
  {"annotated_genes":["SJAG_01756"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87009],"is_not":false,"summary":null,"term":"MONDO:0009624"}]},"cv_name":"mondo","definition":"An autosomal recessive disorder caused by mutation(s) in the TUBGCP6 gene, encoding gamma-tubulin complex component 6. It is characterized by microcephaly and chorioretinopathy.","definition_xrefs":["NCIT:C129306"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"microcephaly and chorioretinopathy","termid":"MONDO:0000181"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly and chorioretinopathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080105","MEDGEN:480111","GARD:16603","Orphanet:2518","UMLS:C3278481","OMIM:251270"],"synonyms":[{"name":"MCCRP1","type":"related"},{"name":"Pseudotoxoplasmosis syndrome","type":"exact"},{"name":"TUBGCP6 microcephaly and chorioretinopathy","type":"exact"},{"name":"autosomal recessive chorioretinopathy-microcephaly syndrome","type":"related"},{"name":"autosomal recessive chorioretinopathy-microcephaly-intellectual disability syndrome","type":"exact"},{"name":"microcephaly and chorioretinopathy 1","type":"exact"},{"name":"microcephaly and chorioretinopathy caused by mutation in TUBGCP6","type":"exact"},{"name":"microcephaly and chorioretinopathy type 1","type":"exact"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, 1","type":"related"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, type 1","type":"exact"}],"termid":"MONDO:0009624","terms_by_termid":{"MONDO:0009624":null},"xrefs":{"Monarch":{"xref_id":"0009624"}}}


id: MONDO:1010524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, American mink","secondary_identifiers":["OMIA:000197-452646"],"termid":"MONDO:1010524","xrefs":{"Monarch":{"xref_id":"1010524"}}}


id: GO:0019579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"aldaric acid catabolic process","synonyms":[{"name":"aldaric acid breakdown","type":"exact"},{"name":"aldaric acid catabolism","type":"exact"},{"name":"aldaric acid degradation","type":"exact"}],"termid":"GO:0019579"}


id: PBO:0085611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA mismatch repair and meiotic recombination; involved in crossing-over during meiotic recombination; forms a complex with Mlh1p; mammalian homolog is implicated mammalian microsatellite instability","termid":"PBO:0085611"}


id: GO:1901551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell development.","definition_xrefs":["GOC:TermGenie","PMID:19470579","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of endothelial cell differentiation","termid":"GO:0045602"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"negatively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell development","synonyms":[{"name":"down regulation of endothelial cell development","type":"exact"},{"name":"down-regulation of endothelial cell development","type":"exact"},{"name":"downregulation of endothelial cell development","type":"exact"},{"name":"inhibition of endothelial cell development","type":"narrow"}],"termid":"GO:1901551"}


id: FYPO:0001013
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119249,119256,119254,119336],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[118969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[118911,119275,119282,119274,118910,118917,119337,118918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[119292,119288,119296,119289,119304,119301],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[118963],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal. Cellular membrane organization results in the assembly, arrangement of constituent parts, or disassembly of a lipid bilayer membrane, such as the plasma membrane or an organelle membrane.","definition_xrefs":["PomBase:mah","GO:0061024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":16,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal membrane organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_01906","SJAG_04464","SJAG_01745","SJAG_03449","SJAG_01242","SJAG_03940","SJAG_04284","SJAG_05207","SJAG_03892","SJAG_03891"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","nem2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","vps32delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","nem1delta","ned1delta","nup61delta","alx1delta","lem2delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cellular membrane organization","type":"exact"},{"name":"abnormal membrane organisation","type":"exact"}],"termid":"FYPO:0001013","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: MONDO:0002633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal growth of the cells that comprise the cranial nerves.","definition_xrefs":["NCIT:C2963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranial nerve neoplasm","secondary_identifiers":["DOID:338","MESH:D003390","SCTID:126966009","ICD9:239.7","MEDGEN:3263","UMLS:C0010267"],"synonyms":[{"name":"cranial nerve neoplasm","type":"exact"},{"name":"cranial nerve neoplasm (disease)","type":"exact"},{"name":"cranial nerve neoplasms","type":"exact"},{"name":"cranial nerve tumor","type":"exact"},{"name":"cranial nerve tumour","type":"exact"},{"name":"neoplasm of cranial nerve","type":"exact"},{"name":"neoplasm of the cranial nerve","type":"exact"},{"name":"tumor of cranial nerve","type":"exact"},{"name":"tumor of the cranial nerve","type":"exact"},{"name":"tumour of cranial nerve","type":"exact"},{"name":"tumour of the cranial nerve","type":"exact"}],"termid":"MONDO:0002633","xrefs":{"Monarch":{"xref_id":"0002633"}}}


id: MONDO:0012604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated microphthalmia in which the cause of the disease is a mutation in the RAX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 3","secondary_identifiers":["OMIM:611038","UMLS:C5774181","MEDGEN:1823955","DOID:0060842","MESH:C567025"],"synonyms":[{"name":"MCOP3","type":"exact"},{"name":"RAX isolated microphthalmia","type":"exact"},{"name":"isolated microphthalmia 3","type":"exact"},{"name":"isolated microphthalmia caused by mutation in RAX","type":"exact"},{"name":"isolated microphthalmia caused by mutation in rax","type":"exact"},{"name":"isolated microphthalmia type 3","type":"exact"},{"name":"microphthalmia, isolated 3","type":"related"},{"name":"microphthalmia, isolated type 3","type":"exact"},{"name":"rax isolated microphthalmia","type":"exact"}],"termid":"MONDO:0012604","xrefs":{"Monarch":{"xref_id":"0012604"}}}


id: GO:0061024
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id: FYPO:0007654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at heterochromatin islands occurs to a lower extent than normal.","definition_xrefs":["PMID:32269268","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007654"}


id: PBO:0071953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 3","termid":"PBO:0071953"}


id: PBO:0061500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin 2","termid":"PBO:0061500"}


id: PBO:0089780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase","termid":"PBO:0089780"}


id: GO:0046247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of terpenes, any of a large group of hydrocarbons made up of isoprene units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"terpene catabolic process","synonyms":[{"name":"terpene breakdown","type":"exact"},{"name":"terpene catabolism","type":"exact"},{"name":"terpene degradation","type":"exact"}],"termid":"GO:0046247"}


id: PBO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 183 pseudogene","termid":"PBO:0070243"}


id: PBO:0060973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC antisense RNA 1","termid":"PBO:0060973"}


id: PBO:0083798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for pre-mRNA splicing; associates transiently with the spliceosomal NTC ('nineteen complex') and acts after Prp2p to promote the first catalytic reaction of splicing","termid":"PBO:0083798"}


id: MONDO:0005995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infestation with nematode worms of the genus trichostrongylus. Humans become infected by swallowing larvae, usually with contaminated food or drink, although the larvae may penetrate human skin.","definition_xrefs":["MESH:D014253-modified"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"trichostrongyloidiasis","termid":"MONDO:0005994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostrongylosis","secondary_identifiers":["ICD10CM:B81.2","MESH:D014253","ICD9:127.6","MEDGEN:11908","DOID:1254","SCTID:33710003","EFO:0007523","UMLS:C0040948"],"synonyms":[{"name":"Trichostrongyliasis","type":"exact"},{"name":"Trichostrongylus caused disease or disorder","type":"exact"},{"name":"Trichostrongylus disease or disorder","type":"exact"},{"name":"Trichostrongylus infectious disease","type":"exact"},{"name":"infection by Trichostrongylus","type":"exact"},{"name":"infection by Trichostrongylus species","type":"exact"}],"termid":"MONDO:0005995","xrefs":{"Monarch":{"xref_id":"0005995"}}}


id: GO:0033140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the phosphorylation of a serine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidyl-serine phosphorylation","termid":"GO:0033137"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine phosphorylation of STAT protein","termid":"GO:0033139"},{"relation_name":"negatively_regulates","term_name":"serine phosphorylation of STAT protein","termid":"GO:0042501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-serine phosphorylation of STAT protein","secondary_identifiers":["GO:1903262"],"synonyms":[{"name":"down regulation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"down-regulation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"downregulation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"inhibition of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"negative regulation of serine phosphorylation of STAT3 protein","type":"narrow"}],"termid":"GO:0033140"}


id: PBO:0040043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARNT2 divergent transcript","termid":"PBO:0040043"}


id: GO:0050201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-fucose + ATP = beta-L-fucose 1-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.52","RHEA:13241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"fucokinase activity","secondary_identifiers":["MetaCyc:FUCOKINASE-RXN","KEGG_REACTION:R03161","Reactome:R-HSA-6787540"],"synonyms":[{"name":"ATP:6-deoxy-L-galactose 1-phosphotransferase activity","type":"related"},{"name":"ATP:beta-L-fucose 1-phosphotransferase activity","type":"related"},{"name":"L-fucokinase activity","type":"related"},{"name":"L-fucose kinase activity","type":"related"},{"name":"fucokinase (phosphorylating) activity","type":"related"},{"name":"fucose kinase activity","type":"related"}],"termid":"GO:0050201"}


id: GO:0086103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An G protein-coupled receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["PMID:17376402","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"heart process","termid":"GO:0003015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in heart process","synonyms":[{"name":"G-protein coupled receptor signaling pathway involved in heart process","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in heart process","type":"exact"},{"name":"GPCR signaling pathway involved in cardiac process","type":"exact"},{"name":"GPCR signaling pathway involved in heart process","type":"exact"}],"termid":"GO:0086103"}


id: PBO:0027894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methyltransferase_activity_(H3-K4_specific)","termid":"PBO:0027894"}


id: SO:1000155
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby a transposition occurred between chromosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_transposition","termid":"SO:0000453"},{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_transposition","synonyms":[{"name":"(Drosophila)Tp","type":"related"},{"name":"interchromosomal transposition","type":"exact"}],"termid":"SO:1000155"}


id: GO:0031020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An mRNA editing complex found in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA editing complex","termid":"GO:0045293"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"plastid mRNA editing complex","synonyms":[{"name":"plastid editosome","type":"exact"}],"termid":"GO:0031020"}


id: PBO:0079352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB antisense RNA 1","termid":"PBO:0079352"}


id: PBO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-F0 ATPase synthase peripheral stalk assembly factor Ina17 (predicted)","termid":"PBO:0036468"}


id: PBO:0070657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 28","termid":"PBO:0070657"}


id: GO:1990145
data:
  {"annotated_genes":["SJAG_00269","SJAG_03262","SJAG_06284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74176,95554,112090],"is_not":false,"summary":null,"term":"GO:1990145"}]},"cv_name":"biological_process","definition":"Suppression of the occurrence of translational errors, such as codon-anticodon mis-paring, during the process of translation of a protein using an mRNA template.","definition_xrefs":["ISBN:9781936113460","PMID:21841312","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00269":null,"SJAG_03262":null,"SJAG_06284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"maintenance of translational fidelity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990145","terms_by_termid":{"GO:1990145":null}}


id: PBO:0014297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator (predicted)","termid":"PBO:0014297"}


id: PBO:0045620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 32 (pseudogene)","termid":"PBO:0045620"}


id: GO:0019097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial small ribosomal RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm mitochondrial rRNA localization","termid":"GO:0019095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pole plasm mitochondrial srRNA localization","secondary_identifiers":["GO:0048119"],"synonyms":[{"name":"establishment and maintenance of mitochondrial localization in pole plasm","type":"exact"},{"name":"oocyte pole plasm mitochondrial srRNA localization","type":"exact"},{"name":"pole plasm mitochondrial srRNA localisation","type":"exact"}],"termid":"GO:0019097"}


id: GO:0090723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a growth cone, the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete growth cone part (obsolete GO:0090723)","termid":"GO:0090723"}


id: GO:1905344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prostaglandin.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","GOC:rl","GOC:BHF","PMID:25290914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid catabolic process","termid":"GO:0062232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"prostaglandin catabolic process","synonyms":[{"name":"prostaglandin breakdown","type":"exact"},{"name":"prostaglandin catabolism","type":"exact"},{"name":"prostaglandin degradation","type":"exact"}],"termid":"GO:1905344"}


id: GO:0055007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:devbiol","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"striated muscle cell differentiation","termid":"GO:0051146"},{"relation_name":"part_of","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell differentiation","synonyms":[{"name":"cardiomyocyte differentiation","type":"exact"},{"name":"heart muscle cell differentiation","type":"related"}],"termid":"GO:0055007"}


id: PBO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamartin","termid":"PBO:0000526"}


id: PR:P41890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scn3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut9-interacting protein scn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.13","synonyms":[{"name":"Spom972h-scn3","type":"exact"}],"termid":"PR:P41890"}


id: PBO:0003525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor Pex5","termid":"PBO:0003525"}


id: PBO:0057698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1286","termid":"PBO:0057698"}


id: MONDO:0021412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the maxillary sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of maxillary sinus","secondary_identifiers":["ICD9:471.8","SCTID:29074008","NCIT:C3931","MEDGEN:120498","UMLS:C0264239"],"synonyms":[{"name":"maxillary antral polyp","type":"exact"},{"name":"maxillary sinus polyp","type":"exact"},{"name":"polyp of the maxillary sinus","type":"exact"}],"termid":"MONDO:0021412","xrefs":{"Monarch":{"xref_id":"0021412"}}}


id: MONDO:0016690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade ll astrocytic tumor with a relatively favorable prognosis. It is characterized by pleomorphic and lipidized cells expressing GFAP often surrounded by a reticulin network and eosinophilic granular bodies. It presents in the superficial cerebral hemispheres and involves the meninges. It typically affects children and young adults.","definition_xrefs":["NCIT:C4323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low-grade astrocytoma","termid":"MONDO:0016685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic xanthoastrocytoma","secondary_identifiers":["GARD:10631","MEDGEN:137786","ONCOTREE:PXA","Orphanet:251607","ICDO:9424/3","UMLS:C0334586","DOID:4852"],"synonyms":[{"name":"PXA","type":"exact"},{"name":"pleomorphic Xantho-astrocytoma","type":"exact"}],"termid":"MONDO:0016690","xrefs":{"Monarch":{"xref_id":"0016690"}}}


id: GO:0090307
data:
  {"annotated_genes":["SJAG_03835","SJAG_03116","SJAG_01224","SJAG_03073","SJAG_02336","SJAG_04901","SJAG_02761","SJAG_01215","SJAG_02332","SJAG_00773","SJAG_02246","SJAG_03540","SJAG_00794","SJAG_04841","SJAG_02609","SJAG_04745","SJAG_00244","SJAG_01613","SJAG_03062","SJAG_07018","SJAG_01546","SJAG_01297","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96641,100776,109410,110381,114856,118474],"is_not":false,"summary":null,"term":"GO:0090307"},{"annotations":[95069,77442,75401],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[102837,73710,99012,96541],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[108063,99644,101226,103688,100173,98410,97059],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[99018,101227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[108658,99019,97060,94534,76775],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[111234],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[71073],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Mitotic bipolar spindle assembly begins with spindle microtubule nucleation from the separated spindle pole body, includes spindle elongation during prometaphase, and is complete when all kinetochores are stably attached the spindle, and the spindle assembly checkpoint is satisfied.","definition_xrefs":["GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02761":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044085","GO:0007010","GO:0000226","GO:0000070"],"is_obsolete":false,"name":"mitotic spindle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:0090307","terms_by_termid":{"GO:0000073":null,"GO:0051256":null,"GO:0061804":null,"GO:0090307":null,"GO:0110161":null,"GO:0140641":null,"GO:1901673":null,"GO:1990810":null}}


id: PBO:0045936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A1","termid":"PBO:0045936"}


id: PBO:0070845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 24","termid":"PBO:0070845"}


id: PBO:0051275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-5","termid":"PBO:0051275"}


id: GO:0050291
data:
  {"annotated_genes":["SJAG_02085","SJAG_02842"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77747,78822],"is_not":false,"summary":null,"term":"GO:0050291"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine.","definition_xrefs":["PMID:12069845","EC:2.3.1.24","MetaCyc:SPHINGOSINE-N-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02085":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"sphingosine N-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-428185","RHEA:23768"],"synonyms":[{"name":"acyl-CoA:sphingosine N-acyltransferase activity","type":"related"},{"name":"ceramide synthase activity","type":"exact"},{"name":"ceramide synthetase activity","type":"related"},{"name":"dihydroceramide synthase activity","type":"exact"},{"name":"sphingosine acyltransferase activity","type":"related"}],"termid":"GO:0050291","terms_by_termid":{"GO:0050291":null}}


id: PBO:0069094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 341, pseudogene","termid":"PBO:0069094"}


id: GO:0051448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to gonadotropin-releasing hormone (GnRH), a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.","definition_xrefs":["PMID:1984190","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"gonadotropin-releasing hormone binding","synonyms":[{"name":"GnRH binding","type":"exact"},{"name":"gonadotrophin releasing hormone binding","type":"exact"}],"termid":"GO:0051448"}


id: PBO:0034371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_1_homology_relationship_with","termid":"PBO:0034371"}


id: PBO:0029843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_acetylation","termid":"PBO:0029843"}


id: GO:1904105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["GOC:TermGenie","GOC:dph","GO_REF:0000058","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in gastrulation","synonyms":[{"name":"activation of convergent extension involved in gastrulation","type":"narrow"},{"name":"up regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"up-regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"upregulation of convergent extension involved in gastrulation","type":"exact"}],"termid":"GO:1904105"}


id: GO:0160068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pollen tube guidance towards ovules. This is one mechanism to prevent polytuby, the simultaneous penetration of ovules by multiple pollen tubes.","definition_xrefs":["PMID:33790463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis","termid":"GO:0050928"},{"relation_name":"negatively_regulates","term_name":"pollen tube guidance","termid":"GO:0010183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pollen tube guidance","synonyms":[{"name":"prevention of polytuby","type":"broad"}],"termid":"GO:0160068"}


id: PBO:0076084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin 4","termid":"PBO:0076084"}


id: MONDO:1012208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perosomus elumbis, non-human animal","termid":"MONDO:1011668"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, horse","secondary_identifiers":["OMIA:000789-9796"],"termid":"MONDO:1012208","xrefs":{"Monarch":{"xref_id":"1012208"}}}


id: PR:O14329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zrg17 gene.","definition_xrefs":["UniProtKB:O14329","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc transporter zrg17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.14c","synonyms":[{"name":"Spom972h-zrg17","type":"exact"}],"termid":"PR:O14329"}


id: MONDO:0100093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial cortical myoclonus caused by heterozygous mutation in the NOL3 gene on chromosome 16q22.","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus, familial","termid":"MONDO:0013981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, familial, 1","secondary_identifiers":["UMLS:C3539916","MEDGEN:761667","OMIM:614937"],"synonyms":[{"name":"FCM","type":"exact"},{"name":"MYOCL1","type":"exact"},{"name":"myoclonus, familial cortical","type":"broad"}],"termid":"MONDO:0100093","xrefs":{"Monarch":{"xref_id":"0100093"}}}


id: MONDO:1011574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, horse","secondary_identifiers":["OMIA:000181-9796"],"termid":"MONDO:1011574","xrefs":{"Monarch":{"xref_id":"1011574"}}}


id: PBO:0085596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; mutant has increased aneuploidy tolerance; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern, and bud at the distal pole; BUD9 has a paralog, BUD8, that arose from the whole genome duplication","termid":"PBO:0085596"}


id: PR:O74489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A quinone oxidoreductase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinone oxidoreductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.16c","secondary_identifiers":["UniProtKB:O74489"],"synonyms":[{"name":"NADPH:quinone reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-qorA","type":"exact"}],"termid":"PR:O74489"}


id: PBO:0079494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 15","termid":"PBO:0079494"}


id: PBO:0078842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 4-1","termid":"PBO:0078842"}


id: PBO:0027274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_elongation_from_RNA_polymerase_II_promoter","termid":"PBO:0027274"}


id: MONDO:1010882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in springboks. There is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase.","definition_xrefs":["PMID:25232033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, springbok","secondary_identifiers":["OMIA:001462-59523"],"synonyms":[{"name":"gangliosidosis, GM2, type II (Sandhoff or variant 0), springbok","type":"related"}],"termid":"MONDO:1010882","xrefs":{"Monarch":{"xref_id":"1010882"}}}


id: MONDO:0957955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"},{"relation_name":"is_a","term_name":"megaloblastic anemia-immunodeficiency due to folate transporter 1 deficiency","termid":"MONDO:0971066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 114, folate-responsive","secondary_identifiers":["OMIM:620603","UMLS:C5882719","MEDGEN:1848890"],"termid":"MONDO:0957955","xrefs":{"Monarch":{"xref_id":"0957955"}}}


id: GO:0003773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any of a group of specific proteins that are synthesized by both prokaryotic and eukaryotic cells after they have been exposed to a temperature that is higher than normal. Other stresses, e.g. free radical damage, have a similar effect. Many members of the hsp family are not induced but are present in all cells. They are characterized by their role as molecular chaperones.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heat shock protein activity (obsolete GO:0003773)","synonyms":[{"name":"heat shock protein activity","type":"exact"}],"termid":"GO:0003773"}


id: MONDO:1010798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in cattle in which the cause of the disease is a mutation in the COL5A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic type, COL5A2-related, cattle","secondary_identifiers":["OMIA:002295-9913"],"synonyms":[{"name":"cEDS","type":"exact"}],"termid":"MONDO:1010798","xrefs":{"Monarch":{"xref_id":"1010798"}}}


id: GO:0090173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptonemal complex assembly. Synaptonemal complex assembly is the cell cycle process in which the synaptonemal complex, a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination, is formed.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"synaptonemal complex assembly","termid":"GO:0007130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of synaptonemal complex assembly","termid":"GO:0090173"}


id: GO:0140534
data:
  {"annotated_genes":["SJAG_01305","SJAG_03066","SJAG_01223","SJAG_01929","SJAG_03535","SJAG_01750","SJAG_06383","SJAG_02208","SJAG_00064","SJAG_01006","SJAG_03416","SJAG_01178","SJAG_01127","SJAG_00360","SJAG_03345","SJAG_03280","SJAG_03930","SJAG_04384","SJAG_04821","SJAG_01709","SJAG_00924","SJAG_04451","SJAG_03841","SJAG_04127","SJAG_02330","SJAG_03333","SJAG_03292","SJAG_02354","SJAG_00295","SJAG_05414","SJAG_02776","SJAG_02914","SJAG_05278","SJAG_03311","SJAG_04370","SJAG_02437","SJAG_01349","SJAG_03955","SJAG_00790","SJAG_06425","SJAG_02875","SJAG_04881","SJAG_02913","SJAG_02867","SJAG_01166","SJAG_02588","SJAG_00175","SJAG_01940","SJAG_01999","SJAG_03710","SJAG_04956","SJAG_01389","SJAG_05274","SJAG_01134","SJAG_05348","SJAG_03115","SJAG_03801","SJAG_03672","SJAG_03261","SJAG_01240","SJAG_00959","SJAG_00277","SJAG_00846","SJAG_04090","SJAG_03737","SJAG_04435","SJAG_01558","SJAG_02065","SJAG_04294","SJAG_02804","SJAG_01051","SJAG_04119","SJAG_01069"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76346,99805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070939"},{"annotations":[75208,71853,76722,78173,79953,74449,91422,100978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072546"},{"annotations":[78298,70382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034663"},{"annotations":[74733,109943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[69524,116420,79879,69610,74379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032865"},{"annotations":[113930,72373,74755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043529"},{"annotations":[78171,76501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017177"},{"annotations":[77253,115942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990529"},{"annotations":[89299,90979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120097"},{"annotations":[70510,58150,77247,92843,108386,92752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000506"},{"annotations":[70278,74231,70552,74221,74977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042765"},{"annotations":[103755,89001,105095,107472,109366,116963,104608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"},{"annotations":[77625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990604"},{"annotations":[78530,102357,75093,99815,62744,78939,74059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008250"},{"annotations":[90999,108201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160005"},{"annotations":[73224,72911,63506,97825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005784"},{"annotations":[95495,69557,90336,72868],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031207"},{"annotations":[73571,65310,61567,67598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"},{"annotations":[68559,94037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005785"},{"annotations":[97826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071261"},{"annotations":[74719,103358,98126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043541"},{"annotations":[75238,70292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A protein complex that is part of an endoplasmic reticulum.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":73,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00277":null,"SJAG_00295":null,"SJAG_00360":null,"SJAG_00790":null,"SJAG_00846":null,"SJAG_00924":null,"SJAG_00959":null,"SJAG_01006":null,"SJAG_01051":null,"SJAG_01069":null,"SJAG_01127":null,"SJAG_01134":null,"SJAG_01166":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01305":null,"SJAG_01349":null,"SJAG_01389":null,"SJAG_01558":null,"SJAG_01709":null,"SJAG_01750":null,"SJAG_01929":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02437":null,"SJAG_02588":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02867":null,"SJAG_02875":null,"SJAG_02913":null,"SJAG_02914":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03261":null,"SJAG_03280":null,"SJAG_03292":null,"SJAG_03311":null,"SJAG_03333":null,"SJAG_03345":null,"SJAG_03416":null,"SJAG_03535":null,"SJAG_03672":null,"SJAG_03710":null,"SJAG_03737":null,"SJAG_03801":null,"SJAG_03841":null,"SJAG_03930":null,"SJAG_03955":null,"SJAG_04090":null,"SJAG_04119":null,"SJAG_04127":null,"SJAG_04294":null,"SJAG_04370":null,"SJAG_04384":null,"SJAG_04435":null,"SJAG_04451":null,"SJAG_04821":null,"SJAG_04881":null,"SJAG_04956":null,"SJAG_05274":null,"SJAG_05278":null,"SJAG_05348":null,"SJAG_05414":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"endoplasmic reticulum protein-containing complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140534","terms_by_termid":{"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0008250":null,"GO:0017177":null,"GO:0031207":null,"GO:0031211":null,"GO:0032865":null,"GO:0034098":null,"GO:0034663":null,"GO:0042765":null,"GO:0043529":null,"GO:0043541":null,"GO:0070939":null,"GO:0071261":null,"GO:0072546":null,"GO:0120097":null,"GO:0160005":null,"GO:1990529":null,"GO:1990604":null}}


id: PBO:0078335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-7","termid":"PBO:0078335"}


id: GO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scopoletin + UDP-D-glucose = H+ + scopolin + UDP.","definition_xrefs":["RHEA:20453","EC:2.4.1.128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"scopoletin glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03594","MetaCyc:SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"SGTase activity","type":"related"},{"name":"UDP-glucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-scopoletin glucosyltransferase activity","type":"related"}],"termid":"GO:0050275"}


id: PBO:0038797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3A (pseudogene)","termid":"PBO:0038797"}


id: PBO:0071440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 46","termid":"PBO:0071440"}


id: FYPO:0005873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thicker than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"output_of","term_name":"abnormal secondary cell septum biogenesis","termid":"FYPO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased secondary cell septum thickness","synonyms":[{"name":"increased secondary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"increased secondary cell septum thickness during vegetative growth","type":"exact"},{"name":"increased secondary septum thickness","type":"exact"},{"name":"thick secondary septum","type":"exact"}],"termid":"FYPO:0005873"}


id: PBO:0079274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 41, pseudogene","termid":"PBO:0079274"}


id: PBO:0084185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone demethylase and transcription factor; regulates genes during nutrient limitation; activity modulated by proteasome-mediated proteolysis; has JmjC and JmjN domain in N-terminus that interact, promoting stability and proper transcriptional activity; contains two transactivating domains downstream of Jmj domains and a C-terminal DNA binding domain; relocalizes to the cytosol in response to hypoxia; GIS1 has a paralog, RPH1, that arose from the whole genome duplication","termid":"PBO:0084185"}


id: PBO:0041872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cas scaffold protein family member 4","termid":"PBO:0041872"}


id: SO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved sequence (5'-CGNMGATCNTY-3') transcription repressor binding site required for gene repression in the presence of high zinc.","direct_ancestors":[{"relation_name":"is_a","term_name":"zinc_repressed_element","termid":"SO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LOZ1_response_element","synonyms":[{"name":"LRE","type":"related"},{"name":"LRE element","type":"related"},{"name":"Loz1 response element","type":"related"}],"termid":"SO:0002225"}


id: MOD:01534
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01534"}


id: PBO:0030709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_replication_origin_binding","termid":"PBO:0030709"}


id: PR:Q9UR05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR05"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain 1, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.07c","synonyms":[{"name":"Spom972h-dlc2","type":"exact"}],"termid":"PR:Q9UR05"}


id: PBO:0052369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 17","termid":"PBO:0052369"}


id: GO:1990079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process involved in the maintenance of an internal equilibrium within cartilage, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["PMID:21652695","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage homeostasis","secondary_identifiers":["GO:1902095","GO:1902096","GO:1902094"],"synonyms":[{"name":"negative regulation of cartilage homeostasis","type":"related"},{"name":"positive regulation of cartilage homeostasis","type":"related"},{"name":"regulation of cartilage homeostasis","type":"related"}],"termid":"GO:1990079"}


id: GO:0097201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:16556235","PMID:18086556","PMID:18627600","PMID:15575969","GOC:rn","PMID:11027285"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0097201)","termid":"GO:0097201"}


id: SO:0002265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Gypsy superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH, INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gypsy_LTR_retrotransposon","synonyms":[{"name":"Gypsy LTR retrotransposon","type":"exact"},{"name":"RLG retrotransposon","type":"exact"},{"name":"Ty3 retrotransposon","type":"exact"}],"termid":"SO:0002265"}


id: PBO:0017617
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease","termid":"PBO:0017617"}


id: PBO:0045337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 10","termid":"PBO:0045337"}


id: GO:0140145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of copper ions out of the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:vw","PMID:12244050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"copper ion export from vacuole","termid":"GO:0140145"}


id: GO:0097639
data:
  {"annotated_genes":["SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100147],"is_not":false,"summary":null,"term":"GO:0097639"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transport","termid":"GO:1903401"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-lysine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903410"],"synonyms":[{"name":"L-lysine import into cell","type":"exact"}],"termid":"GO:0097639","terms_by_termid":{"GO:0097639":null}}


id: MONDO:0013691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Feingold syndrome type 2 (FS2) is a rare inherited malformation syndrome characterized by skeletal abnormalities and mild intellectual disabilities similar to those seen in Feingold syndrome type 1 (FS1) but that lacks the manifestations of gastrointestinal atresia and short palpebral fissures.","definition_xrefs":["Orphanet:391646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Feingold syndrome","termid":"MONDO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Feingold syndrome type 2","secondary_identifiers":["MEDGEN:482119","OMIM:614326","GARD:17625","UMLS:C3280489"],"synonyms":[{"name":"Brunner-Winter syndrome type 2","type":"exact"},{"name":"FGLDS2","type":"exact"},{"name":"FS2","type":"exact"},{"name":"Feingold syndrome 2","type":"related"},{"name":"Feingold syndrome type 2","type":"exact"},{"name":"MMT type 2","type":"exact"},{"name":"brachydactyly with short stature and microcephaly","type":"related"},{"name":"brachydactyly-short stature-microcephaly syndrome","type":"exact"},{"name":"microcephaly-digital anomalies-normal intelligence syndrome type 2","type":"exact"},{"name":"microcephaly-intellectual disability-tracheoesophageal fistula syndrome type 2","type":"exact"}],"termid":"MONDO:0013691","xrefs":{"Monarch":{"xref_id":"0013691"}}}


id: PBO:0087703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme","termid":"PBO:0087703"}


id: PBO:0081029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11A","termid":"PBO:0081029"}


id: MONDO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic vascular disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic vascular disease (obsolete MONDO:0016517)","secondary_identifiers":["Orphanet:233655"],"synonyms":[{"name":"rare genetic vascular disease","type":"exact"}],"termid":"MONDO:0016517","xrefs":{"Monarch":{"xref_id":"0016517"}}}


id: GO:0097078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the 18S rRNA biogenesis. In S. cerevisiae this complex consists of Fal1p and Sgd1p and in humans this complex consists of NOM1 and eIF4AIII subunits.","definition_xrefs":["GOC:rb","PMID:21576267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FAL1-SGD1 complex","termid":"GO:0097078"}


id: PBO:0076103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 8","termid":"PBO:0076103"}


id: MONDO:0019561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of lupus erythematosus characterized by deep dermal or subcutaneous nodules, most often on the head, face, or upper arms. It is generally chronic and occurs most often in women between the ages of 20 and 45.","definition_xrefs":["MESH:D015435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"},{"relation_name":"is_a","term_name":"chronic cutaneous lupus erythematosus","termid":"MONDO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lupus erythematosus panniculitis","secondary_identifiers":["UMLS:C0030327","NCIT:C82884","GARD:19133","Orphanet:90285","MEDGEN:14589","SCTID:15084002"],"synonyms":[{"name":"lupus erythematosus profundus","type":"exact"},{"name":"lupus panniculitis","type":"exact"},{"name":"lupus profundus","type":"exact"}],"termid":"MONDO:0019561","xrefs":{"Monarch":{"xref_id":"0019561"}}}


id: PBO:0031873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pex12 (predicted)","termid":"PBO:0031873"}


id: PBO:0085241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; plays a role in determining prion variants; binds to Hsp82p and contributes to chaperone activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0085241"}


id: GO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Leu-Leu bond in synthetic tetradecapeptide renin substrate, producing angiotensin I, but not active on natural angiotensinogen. Also hydrolyzes BZ-Arg-para-nitroanilide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-renin activity (obsolete GO:0004253)","synonyms":[{"name":"gamma-renin activity","type":"exact"}],"termid":"GO:0004253"}


id: PBO:0084827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for iron-sulfur protein synthesis; performs scaffolding function during Fe/S cluster assembly; involved in Fe-S cluster assembly for both mitochondrial and cytosolic proteins; protein abundance increases under DNA replication stress; ISU2 has a paralog, ISU1, that arose from the whole genome duplication; isu1 isu2 double mutant is inviable; human homolog ISCU implicated in mitochondrial myopathy, can complement isu1 isu2 double mutant","termid":"PBO:0084827"}


id: PBO:0047881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(5)(q15)","termid":"PBO:0047881"}


id: PR:O59796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps3 gene.","definition_xrefs":["UniProtKB:O59796","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.05","synonyms":[{"name":"Spom972h-vps3","type":"exact"}],"termid":"PR:O59796"}


id: GO:0008847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage to 3'-phosphomononucleotides and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"Enterobacter ribonuclease activity","secondary_identifiers":["MetaCyc:3.1.27.6-RXN"],"synonyms":[{"name":"Enterobacter RNase activity","type":"exact"}],"termid":"GO:0008847"}


id: PBO:0034311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_II_bouton_to","termid":"PBO:0034311"}


id: GO:0052899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + N(1),N(12)-diacetylspermine + O2 = 3-acetamidopropanal + H2O2 + N(1)-acetylspermidine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N(1),N(12)-diacetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity (obsolete GO:0052899)","termid":"GO:0052899"}


id: PBO:0031907
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia","termid":"PBO:0031907"}


id: PBO:0003521
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. Pombe YPD1-like protein","termid":"PBO:0003521"}


id: MONDO:0003426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm composed of glands containing epithelial clear cells.","definition_xrefs":["NCIT:C4151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell adenoma","secondary_identifiers":["ICDO:8310/0","UMLS:C0334315","DOID:5390","MEDGEN:90761"],"synonyms":[{"name":"adenoma, clear cell, benign","type":"exact"},{"name":"clear cell adenoma","type":"exact"},{"name":"clear cell adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003426","xrefs":{"Monarch":{"xref_id":"0003426"}}}


id: PBO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase Sdh1 (predicted)","termid":"PBO:0002220"}


id: PATO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence which is lower than normal.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fluorescent","termid":"PATO:0001290"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fluorescence","synonyms":[{"name":"low fluorescence","type":"exact"}],"termid":"PATO:0001927"}


id: MONDO:0005810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by an increase in mononuclear white blood cells and swollen lymph nodes, which is usually caused by infection with the Epstein-Barr virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus infection","termid":"MONDO:0005111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious mononucleosis","secondary_identifiers":["NANDO:1200668","SCTID:186668002","MESH:D007244","icd11.foundation:760139952","DOID:8568","EFO:0007326","ICD9:075","NCIT:C34726","UMLS:C0021345","MEDGEN:7069","NANDO:2200976"],"synonyms":[{"name":"Filatov's disease","type":"exact"},{"name":"Gammaherpesviral mononucleosis","type":"exact"},{"name":"Mono","type":"exact"},{"name":"Pfeiffer's disease","type":"exact"},{"name":"glandular fever","type":"exact"},{"name":"monocytic angina","type":"exact"},{"name":"mononucleosis","type":"exact"}],"termid":"MONDO:0005810","xrefs":{"Monarch":{"xref_id":"0005810"}}}


id: MONDO:0022098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Catamenial pneumothorax is an extremely rare condition that affects women. Pneumothorax is the medical term for a collapsed lung, a condition in which air or gas is trapped in the space surrounding the lungs causing the lungs to collapse. Women with catamenial pneumothorax have recurrent episodes of pneumothorax that occur within 72 hours before or after the start of menstruation. The exact cause of catamenial pneumothorax is unknown and several theories have been proposed. Many cases are associated with the abnormal development of endometrial tissue outside of the uterus (endometriosis). Some believe that catamenial pneumothorax is the most common form of thoracic endometriosis (a condition in which the endometrial tissue grows in or around the lungs). A diagnosis of catamenial pneumothorax is usually suspected when a woman of reproductive age and with endometriosis has episodes of pneumothorax.Treatment is with hormones and surgery.","definition_xrefs":["GARD:0009858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catamenial pneumothorax","secondary_identifiers":["UMLS:C0340007","SCTID:233642001","MEDGEN:83298","MESH:C538279","icd11.foundation:1744257132"],"synonyms":[{"name":"catamenial pneumothorax","type":"exact"},{"name":"premenstrual pneumothorax","type":"related"}],"termid":"MONDO:0022098","xrefs":{"Monarch":{"xref_id":"0022098"}}}


id: GO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining CRISPR repeat clusters, including capture of new spacer elements, expansion or contraction of clusters, propagation of the leader sequence and repeat clusters within a genome, transfer of repeat clusters and CRISPR-associated (cas) genes to new genomes, transcription of the CRISPR repeat arrays into RNA and processing, and interaction of CRISPR/cas loci with the host genome. CRISPR (clustered regularly interspaced short palindromic repeat) elements are a family of sequence elements containing multiple direct repeats of 24-48 bp with weak dyad symmetry which are separated by regularly sized nonrepetitive spacer sequences.","definition_xrefs":["PMID:16292354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"maintenance of CRISPR repeat elements","synonyms":[{"name":"CRISPR element metabolic process","type":"related"},{"name":"CRISPR element metabolism","type":"related"},{"name":"maintenance of clustered regularly interspaced short palindromic repeat elements","type":"exact"}],"termid":"GO:0043571"}


id: MONDO:8000015
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85578],"is_not":false,"summary":null,"term":"MONDO:8000015"}]},"cv_name":"mondo","definition":"Any 46,XY complete gonadal dysgenesis in which the cause of the disease is a mutation in the DHX37 gene.","definition_xrefs":["OMIM:273250","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10002641","SCTID:53599007","MESH:C537770","ICD9:752.89","MEDGEN:78602","UMLS:C0266427","Orphanet:983","GARD:16552"],"synonyms":[{"name":"46, XY sex reversal 11","type":"exact"},{"name":"ETRS","type":"exact"},{"name":"SRXY11","type":"exact"},{"name":"TRS","type":"exact"},{"name":"XY gonadal agenesis syndrome","type":"related"},{"name":"anorchia, familial","type":"related"},{"name":"embryonic testicular regression syndrome","type":"exact"},{"name":"testicular regression syndrome","type":"exact"},{"name":"testicular regression, embryonic","type":"related"},{"name":"vanishing testes syndrome","type":"exact"},{"name":"vanishing testis syndrome","type":"exact"}],"termid":"MONDO:8000015","terms_by_termid":{"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"8000015"}}}


id: PBO:0059669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 35","termid":"PBO:0059669"}


id: PBO:0114387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulphite transmembrane transporter Ssu4","termid":"PBO:0114387"}


id: MONDO:0016596
data:
  {"annotated_genes":["SJAG_06383","SJAG_03506","SJAG_04975","SJAG_00068","SJAG_00295"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009398"},{"annotations":[85918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013882"},{"annotations":[86344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014318"},{"annotations":[86622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014457"},{"annotations":[85525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014780"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_03506":null,"SJAG_04975":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"hyperphosphatasia-intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:383800","GARD:17188","OMIMPS:239300","UMLS:C1855923","DOID:0070431","SCTID:33982008","Orphanet:247262"],"synonyms":[{"name":"HPMR","type":"exact"},{"name":"Mabry syndrome","type":"exact"},{"name":"hyperphosphatasia with intellectual disability syndrome","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome","type":"exact"}],"termid":"MONDO:0016596","terms_by_termid":{"MONDO:0009398":null,"MONDO:0013882":null,"MONDO:0014318":null,"MONDO:0014457":null,"MONDO:0014780":null},"xrefs":{"Monarch":{"xref_id":"0016596"}}}


id: PBO:0027775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone","termid":"PBO:0027775"}


id: PBO:0056481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 3","termid":"PBO:0056481"}


id: RO:HOM0000073
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Synology that results from allopolyploidy.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_ohnology_relationship_with","termid":"RO:HOM0000022"},{"relation_name":"is_a","term_name":"in_synology_relationship_with","termid":"RO:HOM0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homoeology_relationship_with","synonyms":[{"name":"homoeologous to","type":"exact"}],"termid":"RO:HOM0000073"}


id: GO:0098569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the mycolate outer membrane that faces the cell wall peptidoglycan. It is rich in long-chain mycolic acids (hydroxylated branched-chain fatty acids) that are covalently linked to the cell wall peptidoglycan via an arabinogalactan network.","definition_xrefs":["GOC:dos","PMID:18316738","PMID:18567661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"internal side of mycolate outer membrane","termid":"GO:0098569"}


id: PBO:0058483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5590","termid":"PBO:0058483"}


id: PBO:0080560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 11","termid":"PBO:0080560"}


id: GO:1904599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to advanced glycation end-product.","definition_xrefs":["GO_REF:0000067","GOC:krc","PMID:1650387","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"advanced glycation end-product binding","termid":"GO:1904599"}


id: PBO:0074862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 48","termid":"PBO:0074862"}


id: GO:0008037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in an organism interprets its surroundings.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell recognition","synonyms":[{"name":"recognition of surroundings by cell","type":"exact"}],"termid":"GO:0008037"}


id: GO:0140796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 8)= histone H3 L-citrullyl (position 8) + NH4+, resulting in histone H3 citrullination at position 8.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H3R8 arginine deiminase activity","synonyms":[{"name":"H3-R8 citrullination","type":"exact"},{"name":"histone H3-R8 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R8 specific)","type":"exact"}],"termid":"GO:0140796"}


id: PBO:0083642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile patch structures at the cell cortex associated with endocytosis; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; member of the BAR domain family","termid":"PBO:0083642"}


id: RO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has developmental contribution from y iff x has some part z such that z develops from y","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_developmental_contribution_from","termid":"RO:0002254"}


id: MONDO:0021056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any attenuated familial adenomatous polyposis in which the cause of the disease is a mutation in the APC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attenuated familial adenomatous polyposis","termid":"MONDO:0016362"},{"relation_name":"is_a","term_name":"classic familial adenomatous polyposis","termid":"MONDO:0021055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis 1","secondary_identifiers":["DOID:0080409","OMIM:175100","UMLS:C2713442","MEDGEN:398651"],"synonyms":[{"name":"APC attenuated familial adenomatous polyposis","type":"exact"},{"name":"FAP1","type":"exact"},{"name":"Gardner syndrome","type":"related"},{"name":"adenoma, periampullary, somatic","type":"exact"},{"name":"adenomatous polyposis coli","type":"broad"},{"name":"adenomatous polyposis coli, attenuated","type":"related"},{"name":"adenomatous polyposis of the colon","type":"related"},{"name":"attenuated familial adenomatous polyposis caused by mutation in APC","type":"exact"},{"name":"brain tumor-polyposis syndrome 2","type":"related"},{"name":"familial adenomatous polyposis 1","type":"exact"},{"name":"familial adenomatous polyposis, attenuated","type":"related"},{"name":"familial polyposis of the colon","type":"related"},{"name":"polyposis, adenomatous intestinal","type":"related"}],"termid":"MONDO:0021056","xrefs":{"Monarch":{"xref_id":"0021056"}}}


id: FYPO:0005578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intergenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intergenic meiotic recombination reflects crossovers between homologous chromosomes.","definition_xrefs":["PMID:25579976","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal intergenic meiotic recombination","synonyms":[{"name":"normal meiotic intergenic recombination","type":"exact"}],"termid":"FYPO:0005578"}


id: MONDO:0014034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant non-syndromic intellectual disability that has material basis in an autosomal dominant mutation of GATAD2B on chromosome 1q21.3.","definition_xrefs":["DOID:0070048"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"severe intellectual disability-poor language-strabismus-grimacing face-long fingers syndrome","secondary_identifiers":["GARD:12815","Orphanet:363686","MEDGEN:767362","UMLS:C3554448","OMIM:615074"],"synonyms":[{"name":"GAND syndrome","type":"exact"},{"name":"GATAD2B-associated neurodevelopmental disorder","type":"related"},{"name":"MRD18","type":"exact"},{"name":"autosomal dominant intellectual disability 18","type":"exact"},{"name":"autosomal dominant mental retardation 18","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 18","type":"related"},{"name":"intellectual disability, autosomal dominant 18","type":"related"},{"name":"intellectual disability, autosomal dominant type 18","type":"exact"},{"name":"mental retardation, autosomal dominant 18","type":"related"},{"name":"mental retardation, autosomal dominant type 18","type":"exact"},{"name":"severe intellectual disability-poor language-strabismus-grimacing face-long fingers syndrome","type":"exact"}],"termid":"MONDO:0014034","xrefs":{"Monarch":{"xref_id":"0014034"}}}


id: PBO:0082663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; involved in both the endonucleolyitc cleavage and polyadenylation steps of mRNA 3'-end maturation and in gene looping which affects reinitiation of transcription; mutations in human ortholog cause cerebellar neurodegeneration","termid":"PBO:0082663"}


id: PBO:0082866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm F; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Sme1p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm F","termid":"PBO:0082866"}


id: GO:0050950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of melanocyte differentiation","termid":"GO:0045636"},{"relation_name":"is_a","term_name":"regulation of late stripe melanocyte differentiation","termid":"GO:0050940"},{"relation_name":"positively_regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of late stripe melanocyte differentiation","synonyms":[{"name":"activation of late stripe melanocyte differentiation","type":"narrow"},{"name":"positive regulation of late stripe melanophore differentiation","type":"exact"},{"name":"stimulation of late stripe melanocyte differentiation","type":"narrow"},{"name":"up regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"up-regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"upregulation of late stripe melanocyte differentiation","type":"exact"}],"termid":"GO:0050950"}


id: GO:0006686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin metabolic process","termid":"GO:0006684"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingomyelin biosynthetic process","synonyms":[{"name":"sphingomyelin anabolism","type":"exact"},{"name":"sphingomyelin biosynthesis","type":"exact"},{"name":"sphingomyelin formation","type":"exact"},{"name":"sphingomyelin synthesis","type":"exact"}],"termid":"GO:0006686"}


id: PBO:0046289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 6","termid":"PBO:0046289"}


id: MONDO:0009008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart defect - tongue hamartoma - polysyndactyly syndrome","secondary_identifiers":["GARD:4166","Orphanet:1338","MESH:C535849","UMLS:C1857587","MEDGEN:341804","OMIM:217085","DOID:0111591"],"synonyms":[{"name":"CHDTHP","type":"related"},{"name":"Orstavik Lindemann Solberg syndrome","type":"related"},{"name":"Ostravik-Lindemann-Solberg syndrome","type":"exact"},{"name":"congenital heart defects, hamartomas of tongue, and polysyndactyly","type":"related"},{"name":"heart defect - tongue hamartoma - polysyndactyly syndrome","type":"exact"},{"name":"heart defect, tongue hamartoma and polysyndactyly","type":"related"}],"termid":"MONDO:0009008","xrefs":{"Monarch":{"xref_id":"0009008"}}}


