# terms

id: GO:0098972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mitochondria along microtubules in dendrites towards the postsynapse and away from the cell body.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde dendritic transport","termid":"GO:0098937"},{"relation_name":"is_a","term_name":"dendritic transport of mitochondrion","termid":"GO:0098939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterograde dendritic transport of mitochondrion","termid":"GO:0098972"}


id: PBO:0088948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Cox1 translation regulator Ppr4","termid":"PBO:0088948"}


id: GO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Subunit of a heterotrimeric G-protein GTPase that contains the guanine nucleotide binding site and possesses GTPase activity.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heterotrimeric G-protein GTPase, alpha-subunit (obsolete GO:0000263)","synonyms":[{"name":"heterotrimeric G-protein GTPase, alpha-subunit","type":"exact"}],"termid":"GO:0000263"}


id: GO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of organizing and assembling viral replication proteins in preparation for viral replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral replication complex formation and maintenance","termid":"GO:0046786"}


id: FYPO:0004338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing ethanol as the carbon source.","definition_xrefs":["PMID:22139357","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0005447","FYPO:0002057","FYPO:0001985","FYPO:0002058","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"abolished cell population growth on ethanol carbon source","synonyms":[{"name":"abolished ethanol utilization","type":"related"},{"name":"abolished growth on ethanol carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on ethanol carbon source","type":"exact"},{"name":"cell population growth on ethanol carbon source abolished","type":"exact"}],"termid":"FYPO:0004338"}


id: PBO:0045534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 4","termid":"PBO:0045534"}


id: PBO:0036385
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Bulleromyces albus DPS1","termid":"PBO:0036385"}


id: MONDO:0014685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive myoclonic epilepsy in which the cause of the disease is a mutation in the LMNB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"progressive myoclonic epilepsy type 9","secondary_identifiers":["OMIM:616540","DOID:0111450","GARD:17801","Orphanet:457265","UMLS:C4225289","MEDGEN:901242"],"synonyms":[{"name":"EPM9","type":"exact"},{"name":"LMNB2 progressive myoclonic epilepsy","type":"exact"},{"name":"PME type 9","type":"exact"},{"name":"epilepsy, progressive myoclonic, 9","type":"related"},{"name":"epilepsy, progressive myoclonic, type 9","type":"exact"},{"name":"progressive myoclonic epilepsy caused by mutation in LMNB2","type":"exact"},{"name":"progressive myoclonic epilepsy due to LMNB2 deficiency","type":"exact"},{"name":"progressive myoclonus epilepsy type 9","type":"exact"}],"termid":"MONDO:0014685","xrefs":{"Monarch":{"xref_id":"0014685"}}}


id: PBO:0041931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 2","termid":"PBO:0041931"}


id: MONDO:0002189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the sweat glands. It presents as a nodular lesion usually in the scalp, trunk, and proximal extremities. It is characterized by a nodular growth pattern. Complete excision is curative.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hidradenoma","termid":"MONDO:0002805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nodular hidradenoma","secondary_identifiers":["ICDO:8402/0","MEDGEN:1374260","NCIT:C7568","UMLS:C4505470","SCTID:253020008","DOID:2061"],"synonyms":[{"name":"eccrine nodular hidradenoma","type":"related"},{"name":"nodular hidradenoma","type":"exact"},{"name":"solid and cystic hidradenoma","type":"exact"}],"termid":"MONDO:0002189","xrefs":{"Monarch":{"xref_id":"0002189"}}}


id: PBO:0068061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 366","termid":"PBO:0068061"}


id: PBO:0085155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome remodeling protein; functions in various aspects of transcription, chromatin maintenance, and RNA processing; required for fidelity of promoter selection through maintenance of chromatin structure during transcription in order to inhibit transcription from promoters within coding regions; required for H3K36 trimethylation but not dimethylation by Set2p","termid":"PBO:0085155"}


id: GO:0035931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any mineralocorticoid into the circulatory system. Mineralocorticoids are a class of steroid hormones that regulate water and electrolyte metabolism.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mineralocorticoid secretion","termid":"GO:0035931"}


id: MONDO:0017582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenocarcinoma with poor prognosis, arising from the adenohypophysial cells of the anterior lobe of the pituitary gland or pre-existing adenomas. The majority are hormonally functioning neoplasms, usually producing prolactin or ACTH. The diagnosis is based on the presence of metastases. Syndromes associated with pituitary gland carcinomas include hyperprolactinemia, Cushing disease, and acromegaly.","definition_xrefs":["NCIT:C4536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"pituitary cancer","termid":"MONDO:0002109"},{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pituitary adenocarcinoma","secondary_identifiers":["HP:0011763","Orphanet:300385","ICDO:8272/3","MEDGEN:91096","ONCOTREE:PTCA","DOID:4916","SCTID:254955001","GARD:9371","UMLS:C0346300"],"synonyms":[{"name":"PTCA","type":"related"},{"name":"cancer of pituitary","type":"broad"},{"name":"cancer of pituitary gland","type":"broad"},{"name":"cancer of the pituitary","type":"broad"},{"name":"cancer of the pituitary gland","type":"broad"},{"name":"carcinoma of pituitary","type":"exact"},{"name":"carcinoma of pituitary gland","type":"exact"},{"name":"carcinoma of the pituitary","type":"exact"},{"name":"carcinoma of the pituitary gland","type":"exact"},{"name":"pituitary adenocarcinoma (disease)","type":"exact"},{"name":"pituitary carcinoma","type":"exact"},{"name":"pituitary gland adenocarcinoma","type":"exact"},{"name":"pituitary gland cancer","type":"broad"},{"name":"pituitary gland carcinoma","type":"exact"}],"termid":"MONDO:0017582","xrefs":{"Monarch":{"xref_id":"0017582"}}}


id: PBO:0066412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELT TNF receptor","termid":"PBO:0066412"}


id: GO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the hormone aldosterone decreases the rate of diuresis and natriuresis resulting in increased blood volume.","definition_xrefs":["ISBN:0721643949","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of blood volume","termid":"GO:0001977"},{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"},{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood volume by renal aldosterone","synonyms":[{"name":"aldosterone mediated control of body fluids","type":"related"},{"name":"aldosterone mediated regulation of blood volume","type":"exact"},{"name":"renal regulation of blood volume by aldosterone","type":"exact"}],"termid":"GO:0002017"}


id: GO:0000404
data:
  {"annotated_genes":["SJAG_01262","SJAG_02226","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100375,105746,105877],"is_not":false,"summary":null,"term":"GO:0000404"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing a loop. A loop occurs when DNA contains a large insertion or deletion that causes a region of unpaired single-stranded DNA to loop out, while the rest of the DNA is in a paired double-stranded configuration.","definition_xrefs":["PMID:16781730","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"},{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01262":null,"SJAG_01419":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heteroduplex DNA loop binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"loop DNA binding","type":"related"}],"termid":"GO:0000404","terms_by_termid":{"GO:0000404":null}}


id: GO:0009263
data:
  {"annotated_genes":["SJAG_04487","SJAG_04665","SJAG_00885","SJAG_04627","SJAG_04657","SJAG_03771","SJAG_02948","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[92196,95247,107058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[69568,79110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[68119,70518,92197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[70516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[79218,69567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"deoxyribonucleotide metabolic process","termid":"GO:0009262"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleotide anabolism","type":"exact"},{"name":"deoxyribonucleotide biosynthesis","type":"exact"},{"name":"deoxyribonucleotide formation","type":"exact"},{"name":"deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009263","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null}}


id: GO:0003958
data:
  {"annotated_genes":["SJAG_00972","SJAG_04270","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64484,76927,92953],"is_not":false,"summary":null,"term":"GO:0003958"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein.","definition_xrefs":["EC:1.6.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00972":null,"SJAG_04270":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"NADPH-hemoprotein reductase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-76494","MetaCyc:NADPH--FERRIHEMOPROTEIN-REDUCTASE-RXN","RHEA:24040"],"synonyms":[{"name":"CPR activity","type":"related"},{"name":"FAD-cytochrome c reductase activity","type":"related"},{"name":"NADP--cytochrome c reductase activity","type":"narrow"},{"name":"NADP--cytochrome reductase activity","type":"narrow"},{"name":"NADPH--cytochrome P450 oxidoreductase activity","type":"narrow"},{"name":"NADPH--cytochrome P450 reductase activity","type":"narrow"},{"name":"NADPH--cytochrome c oxidoreductase activity","type":"narrow"},{"name":"NADPH--cytochrome c reductase activity","type":"narrow"},{"name":"NADPH--ferricytochrome c oxidoreductase activity","type":"narrow"},{"name":"NADPH--ferrihemoprotein reductase activity","type":"narrow"},{"name":"NADPH-cytochrome P-450 oxidoreductase activity","type":"related"},{"name":"NADPH-cytochrome p-450 reductase activity","type":"related"},{"name":"NADPH-dependent cytochrome c reductase activity","type":"narrow"},{"name":"NADPH-ferrihemoprotein reductase activity","type":"exact"},{"name":"NADPH:P-450 reductase activity","type":"related"},{"name":"NADPH:P450 reductase activity","type":"narrow"},{"name":"NADPH:cytochrome P450 reductase activity","type":"exact"},{"name":"NADPH:cytochrome c reductase activity","type":"exact"},{"name":"NADPH:ferrihemoprotein oxidoreductase activity","type":"related"},{"name":"NADPH:hemoprotein oxidoreductase activity","type":"related"},{"name":"POR","type":"related"},{"name":"TPNH(2) cytochrome c reductase activity","type":"narrow"},{"name":"TPNH-cytochrome c reductase activity","type":"narrow"},{"name":"TPNH2 cytochrome c reductase activity","type":"related"},{"name":"aldehyde reductase (NADPH-dependent) activity","type":"related"},{"name":"cytochrome P-450 reductase activity","type":"related"},{"name":"cytochrome P450 reductase activity","type":"narrow"},{"name":"cytochrome c reductase (reduced nicotinamide adenine dinucleotide phosphate, NADPH, NADPH-dependent) activity","type":"narrow"},{"name":"dihydroxynicotinamide adenine dinucleotide phosphate-cytochrome c reductase activity","type":"narrow"},{"name":"ferrihemoprotein P-450 reductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate-cytochrome c reductase activity","type":"narrow"},{"name":"reductase, cytochrome c (reduced nicotinamide adenine dinucleotide phosphate) activity","type":"narrow"}],"termid":"GO:0003958","terms_by_termid":{"GO:0003958":null}}


id: PBO:0055455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2887","termid":"PBO:0055455"}


id: GO:0070673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-18","synonyms":[{"name":"response to IL-18","type":"exact"}],"termid":"GO:0070673"}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"},{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"}],"termid":"GO:0032723"}


id: PBO:0062318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 3","termid":"PBO:0062318"}


id: GO:0060254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate frequency or extent of the covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"regulates","term_name":"N-terminal protein palmitoylation","termid":"GO:0006500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of N-terminal protein palmitoylation","termid":"GO:0060254"}


id: MONDO:0003746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spindle cell melanoma that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant ciliary body melanoma","termid":"MONDO:0003912"},{"relation_name":"is_a","term_name":"iris spindle cell melanoma","termid":"MONDO:0004188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"ciliary body spindle cell melanoma","secondary_identifiers":["NCIT:C6117","DOID:6043","UMLS:C1333052","MEDGEN:232367"],"synonyms":[{"name":"ciliary body spindle cell melanoma","type":"exact"},{"name":"spindle cell melanoma of ciliary body","type":"exact"},{"name":"spindle cell melanoma of the ciliary body","type":"exact"}],"termid":"MONDO:0003746","xrefs":{"Monarch":{"xref_id":"0003746"}}}


id: PBO:0081985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 12","termid":"PBO:0081985"}


id: PBO:0063544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1 pseudogene 3","termid":"PBO:0063544"}


id: GO:0047736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cellobiose = D-glucosyl-D-mannose.","definition_xrefs":["EC:5.1.3.11","MetaCyc:CELLOBIOSE-EPIMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cellobiose epimerase activity","secondary_identifiers":["RHEA:23384"],"synonyms":[{"name":"cellobiose 2-epimerase activity","type":"related"}],"termid":"GO:0047736"}


id: GO:0046782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the transcription of the viral genome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral transcription","termid":"GO:0046782"}


id: PBO:0057465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR583 host gene","termid":"PBO:0057465"}


id: GO:0099139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process during chimeric sorocarp development that increases by which a cell increases the number of spore cells sharing its genotype at the expense of cells of other genotypes.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"},{"relation_name":"part_of","term_name":"chimeric sorocarp development","termid":"GO:0099134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cheating during chimeric sorocarp development","termid":"GO:0099139"}


id: PBO:0075990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stanniocalcin 2","termid":"PBO:0075990"}


id: GO:0046151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment catabolic process","synonyms":[{"name":"eye pigment breakdown","type":"exact"},{"name":"eye pigment catabolism","type":"exact"},{"name":"eye pigment degradation","type":"exact"}],"termid":"GO:0046151"}


id: PATO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing more than two homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Polyploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploid","termid":"PATO:0001377"}


id: PBO:0079725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding transcription factor like 1","termid":"PBO:0079725"}


id: PBO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Fic1","termid":"PBO:0003675"}


id: PR:Q9P7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase activation protein git1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.20c","synonyms":[{"name":"Spom972h-git1","type":"exact"},{"name":"glucose-insensitive transcription protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K5"}


id: RO:0002344
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}


id: PBO:0025497
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic Trna thioUridilase","termid":"PBO:0025497"}


id: FYPO:0004082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during mitosis","synonyms":[{"name":"normal protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during mitotic M phase","type":"related"},{"name":"normal protein phosphorylation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004082"}


id: FYPO:0002170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated), and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, branched, elongated cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated and branched cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, branched, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, branched, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, branched, elongated cell","type":"exact"}],"termid":"FYPO:0002170"}


id: PBO:0067305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 391, pseudogene","termid":"PBO:0067305"}


id: PBO:0057684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1273c","termid":"PBO:0057684"}


id: MONDO:0004591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An impetigo that is characterized as a form of severe pustular psoriasis occurring in pregnancy.","definition_xrefs":["DOID:8503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impetigo","termid":"MONDO:0004592"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"impetigo herpetiformis","secondary_identifiers":["ICD9:694.3","UMLS:C1314968","NANDO:1200243","MEDGEN:727290","SCTID:65539006"],"termid":"MONDO:0004591","xrefs":{"Monarch":{"xref_id":"0004591"}}}


id: PR:O94409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.02","synonyms":[{"name":"Spom972h-wtf23","type":"exact"}],"termid":"PR:O94409"}


id: MONDO:0014648
data:
  {"annotated_genes":["SJAG_01625"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84875],"is_not":false,"summary":null,"term":"MONDO:0014648"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01625":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"Al-Raqad syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:897610","UMLS:C4085595","OMIM:616459"],"synonyms":[{"name":"AL-RAQAD syndrome","type":"related"},{"name":"ARS","type":"related"},{"name":"Al-Raqad syndrome","type":"exact"}],"termid":"MONDO:0014648","terms_by_termid":{"MONDO:0014648":null},"xrefs":{"Monarch":{"xref_id":"0014648"}}}


id: PBO:0060326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO1D divergent transcript","termid":"PBO:0060326"}


id: MONDO:0859230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kury-Isidor syndrome","secondary_identifiers":["UMLS:C5676925","MEDGEN:1807460","OMIM:619762"],"termid":"MONDO:0859230","xrefs":{"Monarch":{"xref_id":"0859230"}}}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: GO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by lysosomal resident proteases contributing to antigen processing and presentation.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteolysis within lysosome associated with antigen processing and presentation","synonyms":[{"name":"lysosomal proteolysis associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002500"}


id: FYPO:0002690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cumene hydroperoxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on cumene hydroperoxide","synonyms":[{"name":"normal cell population growth in presence of cumene hydroperoxide","type":"exact"},{"name":"normal cell population growth on cumene hydroperoxide","type":"exact"},{"name":"normal cellular response to cumene hydroperoxide","type":"related"},{"name":"normal vegetative cell population growth on cumene hydroperoxide","type":"exact"}],"termid":"FYPO:0002690"}


id: GO:1990593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nascent polypeptide-associated complex, a heterodimeric protein complex that can reversibly bind to ribosomes and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.","definition_xrefs":["PMID:25487825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nascent polypeptide-associated complex binding","synonyms":[{"name":"NAC binding","type":"exact"},{"name":"NACA binding","type":"exact"}],"termid":"GO:1990593"}


id: GO:0098703
data:
  {"annotated_genes":["SJAG_00296","SJAG_02877","SJAG_05229","SJAG_04668","SJAG_03631","SJAG_04551","SJAG_01090"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66567,74120,92158,114242],"is_not":false,"summary":null,"term":"GO:0098703"},{"annotations":[90973,113165],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[101934],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion import","termid":"GO:0070509"},{"relation_name":"is_a","term_name":"calcium ion transmembrane import into cytosol","termid":"GO:0097553"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"},{"relation_name":"is_a","term_name":"calcium ion import into cytosol","termid":"GO:1902656"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990035"],"synonyms":[{"name":"calcium ion import into cell","type":"exact"},{"name":"calcium ion uptake into cell","type":"exact"}],"termid":"GO:0098703","terms_by_termid":{"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: MOD:00252
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-threonine residue to the polymer keratan sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["PubMed:3472204","RESID:AA0247","PubMed:1417734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"keratan sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine","synonyms":[{"name":"keratan sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine","type":"exact"},{"name":"keratosulfate","type":"exact"},{"name":"poly[beta-1,4-(2-acetamido-2-deoxy-6-sulfate D-glucosyl)-beta-1,3-D-galactosyl]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-threonine","type":"exact"}],"termid":"MOD:00252"}


id: GO:1904162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any 5'-3' exodeoxyribonuclease activity that is involved in UV-damage excision repair.","definition_xrefs":["GO_REF:0000061","PMID:10704216","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete 5'-3' exodeoxyribonuclease activity involved in UV-damage excision repair (obsolete GO:1904162)","synonyms":[{"name":"5'-3' exodeoxyribonuclease activity involved in AER","type":"related"},{"name":"5'-3' exodeoxyribonuclease activity involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"5'-3' exodeoxyribonuclease activity involved in UVDE-dependent excision repair","type":"exact"},{"name":"5'-3' exodeoxyribonuclease activity involved in UVER","type":"exact"},{"name":"5'-3' exodeoxyribonuclease activity involved in alternative excision repair","type":"related"}],"termid":"GO:1904162"}


id: GO:0050714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of a protein from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein secretion","synonyms":[{"name":"activation of protein secretion","type":"narrow"},{"name":"stimulation of protein secretion","type":"narrow"},{"name":"up regulation of protein secretion","type":"exact"},{"name":"up-regulation of protein secretion","type":"exact"},{"name":"upregulation of protein secretion","type":"exact"}],"termid":"GO:0050714"}


id: MONDO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuroectodermal tumor (obsolete MONDO:0002084)","termid":"MONDO:0002084","xrefs":{"Monarch":{"xref_id":"0002084"}}}


id: PBO:0079570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 2","termid":"PBO:0079570"}


id: PBO:0072518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 47","termid":"PBO:0072518"}


id: MONDO:0850125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cell type cancer that is composed of epithelial tissue in which tumor cells form glands or glandlike structures, representing an early form of colorectal cancer.","definition_xrefs":["DOID:0080364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant adenoma","termid":"MONDO:0850125","xrefs":{"Monarch":{"xref_id":"0850125"}}}


id: GO:2001257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cation channel activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of cation channel activity","synonyms":[{"name":"regulation of cation diffusion facilitator activity","type":"exact"},{"name":"regulation of nonselective cation channel activity","type":"exact"}],"termid":"GO:2001257"}


id: MONDO:0010336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital syndrome, type 8 is characterized by tongue lobulation, hypoplasia of the epiglottis, median cleft upper lip, broad or bifid nasal tip, hypertelorism or telecanthus, bilateral preaxial and postaxial polydactyly, abnormal tibiae and/or radii, duplication of the halluces, short stature, and mild intellectual deficit.","definition_xrefs":["Orphanet:2755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome VIII","secondary_identifiers":["UMLS:C0796101","MEDGEN:208667","MESH:C557820","SCTID:722106001","GARD:4060","OMIM:300484","DOID:0060378"],"synonyms":[{"name":"OFD syndrome 8","type":"related"},{"name":"OFD8","type":"exact"},{"name":"Ofds 8","type":"related"},{"name":"oral facial digital syndrome 8","type":"related"},{"name":"oral facial digital syndrome type 8","type":"related"},{"name":"oral-Facial-digital syndrome with hypoplastic Epiglottis","type":"related"},{"name":"oral-Facial-digital syndrome, type 8","type":"related"},{"name":"oral-facial-digital syndrome type 8","type":"exact"},{"name":"oral-facial-digital syndrome, Edwards type","type":"exact"},{"name":"orofaciodigital syndrome 8","type":"related"},{"name":"orofaciodigital syndrome VIII","type":"exact"},{"name":"orofaciodigital syndrome VIII, X-linked recessive","type":"exact"},{"name":"orofaciodigital syndrome type 8","type":"related"},{"name":"orofaciodigital syndrome type VIII","type":"exact"},{"name":"orofaciodigital syndrome, Edwards type","type":"exact"}],"termid":"MONDO:0010336","xrefs":{"Monarch":{"xref_id":"0010336"}}}


id: GO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral budding which uses a host ESCRT protein complex, or complexes, to mediate the budding process.","definition_xrefs":["UniProtKB-KW:KW-1187","VZ:1536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding via host ESCRT complex","synonyms":[{"name":"host-assisted viral budding","type":"broad"},{"name":"viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:0039702"}


id: PBO:0062633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily I member 1 pseudogene","termid":"PBO:0062633"}


id: PBO:0080699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 5A","termid":"PBO:0080699"}


id: GO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.","definition_xrefs":["PMID:24009894","PMID:19498381","GOC:vesicles","PMID:17641064","PMID:15908444","PMID:19442504","GOC:BHF","GOC:mah","PMID:22418571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular exosome","synonyms":[{"name":"exosome","type":"exact"},{"name":"extracellular vesicular exosome","type":"exact"}],"termid":"GO:0070062"}


id: PBO:0053762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1004","termid":"PBO:0053762"}


id: GO:0055029
data:
  {"annotated_genes":["SJAG_03285","SJAG_00741","SJAG_04408","SJAG_04368","SJAG_01948","SJAG_02600","SJAG_04654","SJAG_00758","SJAG_03618","SJAG_01151","SJAG_04614","SJAG_03181","SJAG_01475","SJAG_05239","SJAG_03468","SJAG_03144","SJAG_04894","SJAG_01436","SJAG_02174","SJAG_00995","SJAG_04977","SJAG_01128","SJAG_01207","SJAG_00139","SJAG_02172","SJAG_04161","SJAG_03118","SJAG_02653","SJAG_03035","SJAG_03921","SJAG_04420","SJAG_00421","SJAG_02070","SJAG_02627","SJAG_00458","SJAG_00735","SJAG_00619","SJAG_04852","SJAG_01313","SJAG_04933","SJAG_04030","SJAG_01765","SJAG_01710","SJAG_03900","SJAG_00150","SJAG_00731","SJAG_00584","SJAG_03107","SJAG_00159","SJAG_01562","SJAG_00119","SJAG_01444","SJAG_01808","SJAG_00637","SJAG_00512","SJAG_02101","SJAG_01698","SJAG_02541","SJAG_04917","SJAG_00095","SJAG_03206","SJAG_03578","SJAG_02506","SJAG_04261","SJAG_03956","SJAG_04934","SJAG_00116","SJAG_01610","SJAG_04106","SJAG_04274","SJAG_01713","SJAG_04559","SJAG_03761","SJAG_00872","SJAG_04994","SJAG_02871","SJAG_02458","SJAG_00901"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74932,72571,70040,74601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[78404,72174,66597,70633,76127],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[75539,73978,75488,70745,75365,76735,114017,74279,74827,76228,102323,69754,90129,104678,77114,113314,113315,115329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005736"},{"annotations":[75120,77737,74825,74071,70418,72480,75363,76226,76733,78596,112648,70743,72899],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005665"},{"annotations":[72983,92781,76734,116572,79354,73977,76461,74826,69753,62837,71012,75364,79561,76227,74590,70769,70744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005666"},{"annotations":[78415,71817],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[70941,73327,76447,59178,70386,117377,95335,79981,67647,57866,69544,74771,75178,74129,76599,103400],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[69636,75978],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[78981,80156,69545],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[78368,75981,69980,108782,74045,69678,114635,91930],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005675"},{"annotations":[60580,76064,111879],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses DNA-directed RNA polymerase activity.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"is_a","term_name":"nuclear protein-containing 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DNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0055029","terms_by_termid":{"GO:0005658":null,"GO:0005665":null,"GO:0005666":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0005736":null,"GO:0016593":null,"GO:0070985":null}}


id: PBO:0067463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 589, pseudogene","termid":"PBO:0067463"}


id: PR:O94288
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar complex protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03754","PANTHER:PTHR14428:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar complex-associated protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.03c","secondary_identifiers":["UniProtKB:O94288"],"synonyms":[{"name":"Spom972h-NOC3L","type":"exact"}],"termid":"PR:O94288"}


id: PBO:0076213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 4","termid":"PBO:0076213"}


id: FYPO:0003669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which RNA splicing does not take place at a set of splice sites that are normally used, such that an exon is omitted from the mature RNA.","definition_xrefs":["PomBase:mah","PMID:17130122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered splice site specificity","termid":"FYPO:0003467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"exon skipping","synonyms":[{"name":"increased exon skipping","type":"exact"}],"termid":"FYPO:0003669"}


id: PBO:0074949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 112","termid":"PBO:0074949"}


id: GO:1904235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25834989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904235"}


id: GO:0051290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein heterotetramer, a macromolecular structure consisting of four noncovalently associated subunits, of which not all are identical.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tetramerization","termid":"GO:0051262"},{"relation_name":"is_a","term_name":"protein heterooligomerization","termid":"GO:0051291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein heterotetramerization","synonyms":[{"name":"protein heterotetramer assembly","type":"exact"},{"name":"protein heterotetramer biosynthesis","type":"exact"},{"name":"protein heterotetramer biosynthetic process","type":"exact"},{"name":"protein heterotetramer formation","type":"exact"}],"termid":"GO:0051290"}


id: GO:0090396
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell papilla that is part of a leaf papilla cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant cell papilla","termid":"GO:0090395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"leaf papilla","termid":"GO:0090396"}


id: PR:P87114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fft1 gene.","definition_xrefs":["UniProtKB:P87114","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase fft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.08c","synonyms":[{"name":"Fun thirty-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fft1","type":"exact"}],"termid":"PR:P87114"}


id: GO:0070501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds.","definition_xrefs":["PMID:16689787","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly-gamma-glutamate biosynthetic process","synonyms":[{"name":"poly-gamma-glutamate anabolism","type":"exact"},{"name":"poly-gamma-glutamate biosynthesis","type":"exact"},{"name":"poly-gamma-glutamate formation","type":"exact"},{"name":"poly-gamma-glutamate synthesis","type":"exact"}],"termid":"GO:0070501"}


id: GO:0048877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in the retina.","definition_xrefs":["GOC:tb","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"},{"relation_name":"is_a","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of retina cells","termid":"GO:0048877"}


id: PBO:0067457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 582, pseudogene","termid":"PBO:0067457"}


id: PR:O13915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.10","synonyms":[{"name":"Spom972h-mpn1","type":"exact"}],"termid":"PR:O13915"}


id: GO:0016334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a polarized follicular epithelial sheet.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"part_of","term_name":"morphogenesis of follicular epithelium","termid":"GO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"}


id: PBO:0116248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid raft associated CH-OH group oxidoreductase, implicated in lipid/sterol metabolism","termid":"PBO:0116248"}


id: GO:1905489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory neuron axon guidance.","definition_xrefs":["GOC:TermGenie","PMID:16516839","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory neuron axon guidance","termid":"GO:1905489"}


id: GO:0061790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a dense core granule membrane to the plasma membrane.","definition_xrefs":["PMID:26575293","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0140056","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"dense core granule docking","termid":"GO:0061790"}


id: PBO:0034085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-disposition_of","termid":"PBO:0034085"}


id: GO:0019669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycine, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine catabolic process","termid":"GO:0006546"},{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520","GO:0006091"],"is_obsolete":false,"name":"anaerobic glycine catabolic process","synonyms":[{"name":"glycine fermentation","type":"exact"}],"termid":"GO:0019669"}


id: GO:0098942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098942"}


id: MONDO:1012620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited disorder of neuromuscular transmission resulting in muscle weakness and fatigability exacerbated by exercise that occurs in dogs due to a mutation in the CHRNE gene.","definition_xrefs":["PMID:38853290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"myasthenia, dog","termid":"MONDO:1012175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myasthenic syndrome, CHRNE-related, dog","secondary_identifiers":["OMIA:000685-9615"],"termid":"MONDO:1012620","xrefs":{"Monarch":{"xref_id":"1012620"}}}


id: PBO:0040612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2 like 1","termid":"PBO:0040612"}


id: PBO:0054159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1526","termid":"PBO:0054159"}


id: PBO:0042207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin I family member 2","termid":"PBO:0042207"}


id: PBO:0036118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_modification_during_vegetative_growth","termid":"PBO:0036118"}


id: FYPO:0003137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle pole body","termid":"FYPO:0005379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle pole body","synonyms":[{"name":"normal mitotic SPB","type":"exact"},{"name":"normal mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal spindle pole body during mitosis","type":"exact"},{"name":"normal spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0003137"}


id: GO:0099105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a G protein-coupled receptor binding to its physiological ligand, where the pathway proceeds through activation or inhibition of an ion channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ion channel modulating, G protein-coupled receptor signaling pathway","synonyms":[{"name":"ion channel modulating, G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099105"}


id: PBO:0086449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosyltransferase involved in protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; KTR7 has a paralog, KTR5, that arose from the whole genome duplication","termid":"PBO:0086449"}


id: PBO:0066220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 25","termid":"PBO:0066220"}


id: GO:0042797
data:
  {"annotated_genes":["SJAG_04261","SJAG_01765","SJAG_02101","SJAG_04408"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74824,76225,76731,79353],"is_not":false,"summary":null,"term":"GO:0042797"}]},"cv_name":"biological_process","definition":"The synthesis of transfer RNA (tRNA) from a DNA template by RNA polymerase III (Pol III), originating at a Pol III promoter.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"tRNA transcription","termid":"GO:0009304"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01765":null,"SJAG_02101":null,"SJAG_04261":null,"SJAG_04408":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"tRNA transcription from Pol III promoter","type":"exact"},{"name":"tRNA transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0042797","terms_by_termid":{"GO:0042797":null}}


id: PBO:0039398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 3","termid":"PBO:0039398"}


id: PBO:0045125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dematin actin binding protein","termid":"PBO:0045125"}


id: PR:O94543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp1322 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1322.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.03","synonyms":[{"name":"Spom972h-trp1322","type":"exact"}],"termid":"PR:O94543"}


id: PBO:0024822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf3 (predicted)","termid":"PBO:0024822"}


id: PBO:0017511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity Bmt2 (predicted)","termid":"PBO:0017511"}


id: MONDO:0024410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Bifidobacterium.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bifidobacteriales infectious disease","termid":"MONDO:0006706"},{"relation_name":"is_a","term_name":"gram-positive bacterial infections","termid":"MONDO:0021679"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infection caused by Bifidobacterium","secondary_identifiers":["SCTID:721759009","UMLS:C1096283","MEDGEN:923145"],"synonyms":[{"name":"Bifidobacterium caused disease or disorder","type":"exact"},{"name":"Bifidobacterium disease or disorder","type":"exact"},{"name":"Bifidobacterium infection","type":"related"},{"name":"Bifidobacterium infectious disease","type":"exact"},{"name":"infection caused by Bifidobacterium","type":"exact"}],"termid":"MONDO:0024410","xrefs":{"Monarch":{"xref_id":"0024410"}}}


id: GO:0048608
data:
  {"annotated_genes":["SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118041],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075319"}]},"cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of somatic structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures.","definition_xrefs":["GOC:jid","GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"reproductive system development","termid":"GO:0061458"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive structure development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048608","terms_by_termid":{"GO:0075319":null}}


id: PBO:0029472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_acid_phosphatase_activity","termid":"PBO:0029472"}


id: PBO:0081736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF667 antisense RNA 1 (head to head)","termid":"PBO:0081736"}


id: PBO:0083628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase targeting centromere-binding protein Cse4p; mediates polyubiquitination and degradation of histone H3 variant Cse4p; ubiquitination of Cse4p may be antagonized by Scm3p; interacts with the FACT complex preventing mislocalization of Cse4p to euchromatin independent of Slx5p; formyl-methionine/N-recognin component of N-end rule pathway mediating destruction of formylated cytosolic proteins elevated in response to starvation or stationary phase entry","termid":"PBO:0083628"}


id: PBO:0038303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"date_version","termid":"PBO:0038303"}


id: GO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of B cells in the bone marrow.","definition_xrefs":["PMID:16460922","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell tolerance induction","synonyms":[{"name":"central B lymphocyte tolerance induction","type":"exact"},{"name":"central B-cell tolerance induction","type":"exact"},{"name":"central B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002510"}


id: PBO:0062562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AB member 1 pseudogene","termid":"PBO:0062562"}


id: GO:1903244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle hypertrophy in response to stress.","definition_xrefs":["PMID:19287093","GOC:BHF","GO_REF:0000058","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle adaptation","termid":"GO:0010615"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle hypertrophy in response to stress","termid":"GO:1903242"},{"relation_name":"positively_regulates","term_name":"cardiac muscle hypertrophy in response to stress","termid":"GO:0014898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle hypertrophy in response to stress","synonyms":[{"name":"activation of cardiac muscle hypertrophy in response to stress","type":"narrow"},{"name":"up regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"up-regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"upregulation of cardiac muscle hypertrophy in response to stress","type":"exact"}],"termid":"GO:1903244"}


id: GO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the frequency, rate or extent of attachment of a blood vessel endothelial cell to another cell or to the extracellular matrix involved in intussusceptive angiogenesis.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"part_of","term_name":"intussusceptive angiogenesis","termid":"GO:0002041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell adhesion involved in intussusceptive angiogenesis","termid":"GO:0002045"}


id: GO:0061398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to copper ion (obsolete GO:0061398)","termid":"GO:0061398"}


id: GO:0060915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the lung. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in lung development","termid":"GO:0060915"}


id: PBO:0075748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 1","termid":"PBO:0075748"}


id: PBO:0059243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L14","termid":"PBO:0059243"}


id: GO:0035731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a dinitrosyl-iron complex. Nitric oxide (NO) is stored as dinitrosyl-iron complexes, which form spontaneously from Glutathione (GSH), S-nitrosoglutathione, and trace amounts of ferrous ions, or by reaction of iron-sulfur centers with NO.","definition_xrefs":["GOC:BHF","PMID:10534443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal cluster binding","termid":"GO:0051540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dinitrosyl-iron complex binding","synonyms":[{"name":"DNDGIC binding","type":"exact"},{"name":"DNIC binding","type":"exact"},{"name":"dinitrosyl-diglutathionyl-iron complex binding","type":"exact"}],"termid":"GO:0035731"}


id: GO:0021739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesencephalic trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:cls","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesencephalic trigeminal nucleus development","termid":"GO:0021739"}


id: GO:1904996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["GOC:BHF","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","PMID:23897866","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"positively_regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of leukocyte adhesion to vascular endothelial cell","synonyms":[{"name":"activation of leukocyte adhesion to vascular endothelial cell","type":"narrow"},{"name":"up regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"up-regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"upregulation of leukocyte adhesion to vascular endothelial cell","type":"exact"}],"termid":"GO:1904996"}


id: SO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_2_prime_O_dimethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_two_prime_O_dimethyluridine","secondary_identifiers":["RNAMOD:054"],"synonyms":[{"name":"5,2'-O-dimethyluridine","type":"exact"},{"name":"five two prime O dimethyluridine","type":"exact"},{"name":"m5Um","type":"exact"}],"termid":"SO:0001346"}


id: PBO:0077961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-2","termid":"PBO:0077961"}


id: GO:0036171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a chemical stimulus.","definition_xrefs":["GOC:di","PMID:17554048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}


id: PBO:0078596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 9, Y-linked","termid":"PBO:0078596"}


id: PBO:0066947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 249","termid":"PBO:0066947"}


id: PBO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.10","termid":"PBO:0001840"}


id: PBO:0048327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 38","termid":"PBO:0048327"}


id: GO:0090616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071","GO:0140053"],"is_obsolete":false,"name":"mitochondrial mRNA 3'-end processing","termid":"GO:0090616"}


id: PBO:0062755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily M member 2 pseudogene","termid":"PBO:0062755"}


id: MONDO:0011712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any van der Woude syndrome in which the cause of the disease is a mutation in the GRHL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"van der Woude syndrome","termid":"MONDO:0019508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van der Woude syndrome 2","secondary_identifiers":["GARD:7846","MEDGEN:338272","MESH:C536529","UMLS:C1847604","OMIM:606713"],"synonyms":[{"name":"GRHL3 van der Woude syndrome","type":"exact"},{"name":"VAN DER Woude syndrome 2","type":"related"},{"name":"VWS2","type":"related"},{"name":"Van Der Woude syndrome type 2","type":"exact"},{"name":"van der Woude syndrome 2","type":"exact"},{"name":"van der Woude syndrome caused by mutation in GRHL3","type":"exact"}],"termid":"MONDO:0011712","xrefs":{"Monarch":{"xref_id":"0011712"}}}


id: PBO:0068905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 147, pseudogene","termid":"PBO:0068905"}


id: PBO:0066807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 106","termid":"PBO:0066807"}


id: PBO:0059829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 3","termid":"PBO:0059829"}


id: MONDO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma","termid":"MONDO:0005496"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"squamous cell bile duct carcinoma","secondary_identifiers":["NCIT:C5777","DOID:5537","UMLS:C0861861","MEDGEN:209017"],"synonyms":[{"name":"bile duct squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003500","xrefs":{"Monarch":{"xref_id":"0003500"}}}


id: PBO:0018139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mis6-Sim4 complex subunit Fta4","termid":"PBO:0018139"}


id: MONDO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the esophagus. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagus sarcoma","termid":"MONDO:0001204"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophagus leiomyosarcoma","secondary_identifiers":["MEDGEN:272589","NCIT:C5334","UMLS:C1333454","DOID:5276"],"synonyms":[{"name":"esophageal leiomyosarcoma","type":"exact"},{"name":"esophagus leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of esophagus","type":"exact"},{"name":"leiomyosarcoma of oesophagus","type":"exact"},{"name":"leiomyosarcoma of the esophagus","type":"exact"},{"name":"leiomyosarcoma of the oesophagus","type":"exact"}],"termid":"MONDO:0003365","xrefs":{"Monarch":{"xref_id":"0003365"}}}


id: FYPO:0006562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G2 phase of the mitotic cell cycle is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during mitotic G2 phase","synonyms":[{"name":"increased RNA accumulation during mitotic G2 phase","type":"related"},{"name":"increased RNA level during G2 phase of mitotic cell cycle","type":"exact"},{"name":"increased RNA level during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"increased mRNA level during mitotic G2 phase","type":"narrow"},{"name":"increased transcript level during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0006562"}


id: PBO:0058935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS18 binding protein 1","termid":"PBO:0058935"}


id: PBO:0040131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 16","termid":"PBO:0040131"}


id: GO:0005591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type VIII alpha chains; [alpha1(VIII)2]alpha2(VIII) and alpha1(VIII)[alpha2(VIII)]2 trimers have been observed; type VIII collagen triple helices associate to form regular hexagonal nets.","definition_xrefs":["PMID:21421911","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain collagen trimer","termid":"GO:0005598"},{"relation_name":"is_a","term_name":"sheet-forming collagen trimer","termid":"GO:0030935"},{"relation_name":"is_a","term_name":"basement membrane collagen trimer","termid":"GO:0098651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type VIII trimer","termid":"GO:0005591"}


id: PBO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit (predicted)","termid":"PBO:0001501"}


id: PBO:0074594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 7B","termid":"PBO:0074594"}


id: PBO:0061209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noggin","termid":"PBO:0061209"}


id: GO:1903535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["PMID:12018418","GO_REF:0000058","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of lactose biosynthetic process","termid":"GO:1903534"},{"relation_name":"negatively_regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lactose biosynthetic process","synonyms":[{"name":"down regulation of lactose anabolism","type":"exact"},{"name":"down regulation of lactose biosynthesis","type":"exact"},{"name":"down regulation of lactose biosynthetic process","type":"exact"},{"name":"down regulation of lactose formation","type":"exact"},{"name":"down regulation of lactose synthesis","type":"exact"},{"name":"down-regulation of lactose anabolism","type":"exact"},{"name":"down-regulation of lactose biosynthesis","type":"exact"},{"name":"down-regulation of lactose biosynthetic process","type":"exact"},{"name":"down-regulation of lactose formation","type":"exact"},{"name":"down-regulation of lactose synthesis","type":"exact"},{"name":"downregulation of lactose anabolism","type":"exact"},{"name":"downregulation of lactose biosynthesis","type":"exact"},{"name":"downregulation of lactose biosynthetic process","type":"exact"},{"name":"downregulation of lactose formation","type":"exact"},{"name":"downregulation of lactose synthesis","type":"exact"},{"name":"inhibition of lactose anabolism","type":"narrow"},{"name":"inhibition of lactose biosynthesis","type":"narrow"},{"name":"inhibition of lactose biosynthetic process","type":"narrow"},{"name":"inhibition of lactose formation","type":"narrow"},{"name":"inhibition of lactose synthesis","type":"narrow"},{"name":"negative regulation of lactose anabolism","type":"exact"},{"name":"negative regulation of lactose biosynthesis","type":"exact"},{"name":"negative regulation of lactose formation","type":"exact"},{"name":"negative regulation of lactose synthesis","type":"exact"}],"termid":"GO:1903535"}


id: PBO:0068263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal N5","termid":"PBO:0068263"}


id: PBO:0041077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of ribosomes BRX1","termid":"PBO:0041077"}


id: FYPO:0005079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at centromere central core","synonyms":[{"name":"normal protein localisation to chromatin at centromere central core","type":"exact"},{"name":"normal protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric central core","type":"exact"}],"termid":"FYPO:0005079"}


id: PR:000050533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PRO:DAN","PMID:22150589","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me2(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf2 gene translation product, initiator methionine removed dimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf2/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050533"}


id: PBO:0056740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METAP2 pseudogene 1","termid":"PBO:0056740"}


id: GO:0048484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.","definition_xrefs":["FMA:66070","GOC:sr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enteric nervous system development","termid":"GO:0048484"}


id: GO:0106140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P-TEFb complex.","definition_xrefs":["PMID:18391197","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"P-TEFb complex binding","termid":"GO:0106140"}


id: PBO:0085149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside diphosphate kinase; catalyzes the transfer of gamma phosphates from nucleoside triphosphates, usually ATP, to nucleoside diphosphates by a mechanism that involves formation of an autophosphorylated enzyme intermediate; protein abundance increases in response to DNA replication stress","termid":"PBO:0085149"}


id: MOD:00177
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-argininine residue to omega-N-(ADP-ribosyl)-L-arginine.","definition_xrefs":["PubMed:6582062","PubMed:15842200","PubMed:209022","PubMed:3090031","PubMed:3923473","Unimod:213#R","DeltaMass:0","RESID:AA0168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omega-N-(ADP-ribosyl)-L-arginine","synonyms":[{"name":"(S)-2-amino-5-([imino([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)methyl]amino)pentanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"ADPRibArg","type":"exact"},{"name":"MOD_RES ADP-ribosylarginine","type":"exact"},{"name":"N(omega)-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-arginine","type":"exact"},{"name":"N(omega)-alpha-D-ribofuranosyl-L-arginine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"N-(ADP-ribosyl)- (on Arginine)","type":"exact"},{"name":"omega-N-(ADP-ribosyl)-L-arginine","type":"exact"}],"termid":"MOD:00177"}


id: PBO:0075520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E1","termid":"PBO:0075520"}


id: GO:1903332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein folding.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"regulation of protein folding","synonyms":[{"name":"regulation of alpha-tubulin folding","type":"narrow"},{"name":"regulation of beta-tubulin folding","type":"narrow"},{"name":"regulation of chaperone activity","type":"related"},{"name":"regulation of chaperonin ATPase activity","type":"related"},{"name":"regulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"regulation of co-chaperone activity","type":"related"},{"name":"regulation of co-chaperonin activity","type":"related"},{"name":"regulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"regulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"regulation of protein complex assembly, multichaperone pathway","type":"related"}],"termid":"GO:1903332"}


id: PBO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP3 regulating long intergenic non-coding RNA","termid":"PBO:0047675"}


id: GO:0009523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.","definition_xrefs":["ISBN:0943088399","GOC:ds","PMID:9821949","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem","termid":"GO:0009521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"photosystem II","secondary_identifiers":["Wikipedia:Photosystem_II"],"termid":"GO:0009523"}


id: GO:0120505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl79-[histone H3] + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:14732680","PMID:15371351","RHEA:60332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0008276","GO:0016741","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H3K79 monomethyltransferase activity","termid":"GO:0120505"}


id: FYPO:0006798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to the nuclear MIS12/MIND complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah","PMID:29180432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal nuclear MIS12/MIND complex binding","synonyms":[{"name":"normal nuclear MIS12/MIND complex binding during mitotic cell cycle","type":"related"},{"name":"normal nuclear MIS12/MIND complex binding during vegetative growth","type":"exact"}],"termid":"FYPO:0006798"}


id: GO:0008899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + succinyl-CoA = O-succinyl-L-homoserine + CoA.","definition_xrefs":["EC:2.3.1.46","RHEA:22008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-succinyltransferase activity","termid":"GO:0016750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"homoserine O-succinyltransferase activity","secondary_identifiers":["MetaCyc:HOMSUCTRAN-RXN","KEGG_REACTION:R01777"],"synonyms":[{"name":"homoserine O-transsuccinylase activity","type":"broad"},{"name":"homoserine succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-homoserine O-succinyltransferase activity","type":"related"}],"termid":"GO:0008899"}


id: MONDO:0007066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine triphosphatase deficiency, anemia due to","secondary_identifiers":["SCTID:725057008","UMLS:C1863225","Orphanet:1044","MESH:C566311","MEDGEN:350115","OMIM:102800","GARD:548"],"synonyms":[{"name":"adenosine triphosphatase deficiency anaemia","type":"related"},{"name":"adenosine triphosphatase deficiency anemia","type":"related"},{"name":"adenosine triphosphatase deficiency, anemia due to","type":"exact"},{"name":"anaemia due to adenosine triphosphatase deficiency","type":"related"},{"name":"anemia due to adenosine triphosphatase deficiency","type":"related"}],"termid":"MONDO:0007066","xrefs":{"Monarch":{"xref_id":"0007066"}}}


id: MONDO:0009364
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85607,85608,85609],"is_not":false,"summary":null,"term":"MONDO:0009364"}]},"cv_name":"mondo","definition":"An autosomal recessive muscular dystrophy caused by mutations in the POMT1 gene, encoding protein O-mannosyl-transferase 1. It is associated with characteristic brain and eye malformations, profound mental retardation, and early death.","definition_xrefs":["NCIT:C128118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMT1","termid":"MONDO:0700070"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0002320","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111237","MEDGEN:924974","UMLS:C4284790","OMIM:236670"],"synonyms":[{"name":"MDDGA1","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, Pomt1-related","type":"related"},{"name":"cerebroocular dysplasia-muscular dystrophy syndrome","type":"related"},{"name":"cod-MD syndrome","type":"related"},{"name":"hard syndrome","type":"related"},{"name":"hydrocephalus, agyria, and retinal dysplasia","type":"related"},{"name":"muscle-eye-brain-POMT1 related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies) type A, 1","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1","type":"related"}],"termid":"MONDO:0009364","terms_by_termid":{"MONDO:0009364":null},"xrefs":{"Monarch":{"xref_id":"0009364"}}}


id: PBO:0065552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 2","termid":"PBO:0065552"}


id: GO:0050780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a dopamine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"dopamine receptor binding","termid":"GO:0050780"}


id: PBO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic nuclear protein implicated in meiotic chromosome segregation","termid":"PBO:0004924"}


id: GO:0042086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to an acceptor molecule, dependent on the presence of 5-methyl-5,6,7,8-tetrahydromethanopterin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"5-methyl-5,6,7,8-tetrahydromethanopterin-dependent methyltransferase activity","termid":"GO:0042086"}


id: MONDO:0018797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","secondary_identifiers":["Orphanet:477805"],"termid":"MONDO:0018797","xrefs":{"Monarch":{"xref_id":"0018797"}}}


id: FYPO:0007122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of assembly of one or more mitochondrial respiratory chain complexes is decreased.","definition_xrefs":["PMID:31350787","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex assembly","synonyms":[{"name":"decreased mitochondrial respiratory chain complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex assembly during vegetative growth","type":"exact"},{"name":"decreased mitochondrial respiratory complex assembly","type":"exact"},{"name":"reduced mitochondrial respiratory chain complex assembly","type":"exact"}],"termid":"FYPO:0007122"}


id: GO:0048284
data:
  {"annotated_genes":["SJAG_03536","SJAG_02265","SJAG_02384","SJAG_01379","SJAG_00204","SJAG_01370","SJAG_00855","SJAG_03137","SJAG_04739","SJAG_02241","SJAG_04023","SJAG_02595","SJAG_03005","SJAG_00330","SJAG_02286","SJAG_01299","SJAG_01613","SJAG_00031","SJAG_00810","SJAG_00029","SJAG_03347","SJAG_01072","SJAG_03011","SJAG_00557","SJAG_03670","SJAG_00171","SJAG_02433","SJAG_01357","SJAG_05184","SJAG_03889","SJAG_02737","SJAG_02045","SJAG_00304","SJAG_02656","SJAG_00380","SJAG_04909","SJAG_04966","SJAG_01598","SJAG_02315","SJAG_03403","SJAG_04513","SJAG_02587","SJAG_04936","SJAG_00430","SJAG_03552","SJAG_01697","SJAG_03915","SJAG_04978","SJAG_00826","SJAG_01324","SJAG_03386","SJAG_01633","SJAG_01772","SJAG_03072","SJAG_05194","SJAG_03848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74672,79560],"is_not":false,"summary":null,"term":"GO:0048284"},{"annotations":[77985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[99299,76922,99501,74291,79482,70885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[95708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[90750,78409,99008,111263,87504,91142,116753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000742"},{"annotations":[91696,95856,72189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008053"},{"annotations":[104701],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990627"},{"annotations":[101836,106251],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010637"},{"annotations":[101240],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061192"},{"annotations":[78410],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0048288"},{"annotations":[110065,97399],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061191"},{"annotations":[97162],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032889"},{"annotations":[75212],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[99302,115991,94080,117365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097576"},{"annotations":[108081,100540,100910,99749,91053,90927,104431,116636,100042,70812,109230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042144"},{"annotations":[100869,97876,75891,76277,109457,90332,77483,100639,112485,117322,77753,71713,117367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[75728,73555,77395,57526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The creation of a single organelle from two or more organelles.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00031":null,"SJAG_00171":null,"SJAG_00204":null,"SJAG_00304":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_00855":null,"SJAG_01072":null,"SJAG_01299":null,"SJAG_01324":null,"SJAG_01357":null,"SJAG_01370":null,"SJAG_01379":null,"SJAG_01598":null,"SJAG_01613":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_02045":null,"SJAG_02241":null,"SJAG_02265":null,"SJAG_02286":null,"SJAG_02315":null,"SJAG_02384":null,"SJAG_02433":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_02656":null,"SJAG_02737":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03386":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_03915":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04909":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organelle fusion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048284","terms_by_termid":{"GO:0000742":null,"GO:0006906":null,"GO:0008053":null,"GO:0010637":null,"GO:0016320":null,"GO:0032889":null,"GO:0034058":null,"GO:0035493":null,"GO:0042144":null,"GO:0048210":null,"GO:0048280":null,"GO:0048284":null,"GO:0048288":null,"GO:0061191":null,"GO:0061192":null,"GO:0097576":null,"GO:1990627":null}}


id: SO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that leads to the change of an amino acid within the protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_synonymous","synonyms":[{"name":"non synonymous","type":"related"}],"termid":"SO:0001816"}


id: PBO:0031313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septation","termid":"PBO:0031313"}


id: PBO:0074551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 4","termid":"PBO:0074551"}


id: PBO:0071991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 20","termid":"PBO:0071991"}


id: GO:0043736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of alkylated DNA; recognizes and removes both N-3- and N-7-methyl purines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic (AP) site.","definition_xrefs":["PMID:10375529"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA-3-methyladenine glycosylase IV activity (obsolete GO:0043736)","synonyms":[{"name":"DNA-3-methyladenine glycosylase IV activity","type":"exact"},{"name":"Mpg II","type":"narrow"},{"name":"MpgII","type":"narrow"}],"termid":"GO:0043736"}


id: MONDO:0010385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of decreased or absent presence of baculoviral IAP repeat-containing protein 4. Deficiency of this protein is associated with X-linked lymphoproliferative syndrome 2.","definition_xrefs":["NCIT:C126295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked lymphoproliferative syndrome","termid":"MONDO:0010627"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"X-linked lymphoproliferative disease due to XIAP deficiency","secondary_identifiers":["Orphanet:538934","UMLS:C1845076","GARD:10916","MEDGEN:336848","DOID:0060706","OMIM:300635","MESH:C564469"],"synonyms":[{"name":"X-linked lymphoproliferative disease due to XIAP deficiency","type":"exact"},{"name":"X-linked lymphoproliferative syndrome type 2","type":"exact"},{"name":"XIAP deficiency","type":"exact"},{"name":"XIAP deficiency/XLPs","type":"exact"},{"name":"XIAP-related lymphoproliferative disease, X-linked","type":"related"},{"name":"XLP2","type":"exact"},{"name":"Xiap deficiency","type":"related"},{"name":"lymphoproliferative syndrome, X-linked, 2","type":"related"},{"name":"lymphoproliferative syndrome, X-linked, 2, X-linked recessive","type":"exact"},{"name":"lymphoproliferative syndrome, X-linked, type 2","type":"exact"}],"termid":"MONDO:0010385","xrefs":{"Monarch":{"xref_id":"0010385"}}}


id: MONDO:0018995
data:
  {"annotated_genes":["SJAG_03248","SJAG_03046","SJAG_04334","SJAG_02289","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011066"},{"annotations":[86816,86817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[86522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012640"},{"annotations":[85696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014733"}]},"cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4 (CMT4) belongs to the genetically heterogeneous group of CMT peripheral sensorimotor polyneuropathy diseases.","definition_xrefs":["Orphanet:64749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02289":null,"SJAG_03046":null,"SJAG_03248":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050541","GARD:12440","SCTID:715795005","MEDGEN:905419","UMLS:C4082197"],"synonyms":[{"name":"AR-CMT1","type":"exact"},{"name":"CMT4","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth","type":"exact"}],"termid":"MONDO:0018995","terms_by_termid":{"MONDO:0011066":null,"MONDO:0011534":null,"MONDO:0012640":null,"MONDO:0014733":null},"xrefs":{"Monarch":{"xref_id":"0018995"}}}


id: PBO:0036102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0036102"}


id: PBO:0066798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 97","termid":"PBO:0066798"}


id: GO:0044167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the host cell endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endomembrane system","termid":"GO:0033645"},{"relation_name":"part_of","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum membrane","synonyms":[{"name":"host endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0044167"}


id: PBO:0017897
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EIF3E","termid":"PBO:0017897"}


id: GO:0003143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic heart tube are generated and organized. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"},{"relation_name":"part_of","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube morphogenesis","termid":"GO:0003143"}


id: GO:1990655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 4 iron, 3 sulfur (4Fe-3S) cluster, an uncommon iron-sulfur cluster with unique properties found in oxygen-tolerant Ni-Fe hydrogenases of various bacteria.","definition_xrefs":["PMID:23267108","GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"4 iron, 3 sulfur cluster binding","synonyms":[{"name":"4Fe-3S cluster binding","type":"related"}],"termid":"GO:1990655"}


id: PBO:0070170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 84 pseudogene","termid":"PBO:0070170"}


id: PR:G2TRP3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ymr31 gene.","definition_xrefs":["UniProtKB:G2TRP3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein YMR-31, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.14","synonyms":[{"name":"Spom972h-ymr31","type":"exact"}],"termid":"PR:G2TRP3"}


id: PBO:0051674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 4","termid":"PBO:0051674"}


id: PBO:0064329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastin 3","termid":"PBO:0064329"}


id: PBO:0071812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 7","termid":"PBO:0071812"}


id: MONDO:0013778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pseudohypoaldosteronism type 2 in which the cause of the disease is a mutation in the WNK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 2","termid":"MONDO:0019162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 2C","secondary_identifiers":["icd11.foundation:1052840113","MEDGEN:327089","GARD:16777","Orphanet:88940","MESH:C564162","OMIM:614492","UMLS:C1840391"],"synonyms":[{"name":"PHA2C","type":"exact"},{"name":"WNK1 pseudohypoaldosteronism type 2","type":"exact"},{"name":"pseudohypoaldosteronism type 2 caused by mutation in WNK1","type":"exact"},{"name":"pseudohypoaldosteronism, type 2C","type":"related"},{"name":"pseudohypoaldosteronism, type IIC","type":"related"}],"termid":"MONDO:0013778","xrefs":{"Monarch":{"xref_id":"0013778"}}}


id: GO:0003078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of natriuresis, the process of renal sodium excretion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of natriuresis (obsolete GO:0003078)","synonyms":[{"name":"regulation of natriuresis","type":"exact"}],"termid":"GO:0003078"}


id: PBO:0060261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloma overexpressed","termid":"PBO:0060261"}


id: PBO:0081722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 652","termid":"PBO:0081722"}


id: GO:0031820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y11 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"P2Y11 nucleotide receptor binding","synonyms":[{"name":"P2Y11 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031820"}


id: PR:Q9Y7U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gep4 gene.","definition_xrefs":["UniProtKB:Q9Y7U3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphatase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.02","synonyms":[{"name":"PGP phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gep4","type":"exact"}],"termid":"PR:Q9Y7U3"}


id: PBO:0067044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 63, pseudogene","termid":"PBO:0067044"}


id: GO:2000480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"regulation of cAMP-dependent protein kinase activity","termid":"GO:2000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of AMPK","type":"related"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"negative regulation of PKA","type":"related"},{"name":"negative regulation of PKA C","type":"related"},{"name":"negative regulation of STK22","type":"related"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000480"}


id: MONDO:0009317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A trichothiodystrophy that is non-photosensitive","definition_xrefs":["Wikipedia:Trichothiodystrophy"],"gene_count":0,"genotype_count":0,"name":"obsolete nonphotosensitive trichothiodystrophy (obsolete MONDO:0009317)","secondary_identifiers":["Orphanet:1245","DOID:0111867"],"termid":"MONDO:0009317","xrefs":{"Monarch":{"xref_id":"0009317"}}}


id: MONDO:0971137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe congenital myelofibrosis-pancytopenia-intellectual disability-neurologic and ophthalmic abnormalities syndrome","secondary_identifiers":["Orphanet:675775"],"termid":"MONDO:0971137","xrefs":{"Monarch":{"xref_id":"0971137"}}}


id: PBO:0082413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional carbamoylphosphate synthetase/aspartate transcarbamylase; catalyzes the first two enzymatic steps in the de novo biosynthesis of pyrimidines; both activities are subject to feedback inhibition by UTP","termid":"PBO:0082413"}


id: PBO:0064445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC1B-GALNT4 readthrough","termid":"PBO:0064445"}


id: FYPO:0005869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable and has one nucleus and more than one septum, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"inviable stubby septated vegetative cell","termid":"FYPO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000005","FYPO:0005447","FYPO:0001985","FYPO:0000004","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"inviable stubby multiseptate vegetative cell","synonyms":[{"name":"inviable stubby multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable stubby multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped multiseptate vegetative cell","type":"exact"},{"name":"lethal; stubby multiseptate vegetative cell","type":"exact"},{"name":"stubby multiseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0005869"}


id: PBO:0044469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 7 subfamily B member 1","termid":"PBO:0044469"}


id: PBO:0015247
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(5)","termid":"PBO:0015247"}


id: PBO:0067675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 860, pseudogene","termid":"PBO:0067675"}


id: GO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanyl-CoA = acryloyl-CoA + NH3.","definition_xrefs":["MetaCyc:BETA-ALANYL-COA-AMMONIA-LYASE-RXN","EC:4.3.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-alanyl-CoA ammonia-lyase activity","secondary_identifiers":["RHEA:12416"],"synonyms":[{"name":"b-alanyl-CoA ammonia-lyase activity","type":"exact"},{"name":"beta-alanyl coenzyme A ammonia-lyase activity","type":"related"},{"name":"beta-alanyl-CoA ammonia-lyase (acryloyl-CoA-forming)","type":"related"}],"termid":"GO:0047698"}


id: MONDO:0850083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic bicoronal and sagittal craniosynostosis","secondary_identifiers":["MEDGEN:1842401","Orphanet:620205","GARD:22480","UMLS:C5680391"],"termid":"MONDO:0850083","xrefs":{"Monarch":{"xref_id":"0850083"}}}


id: PBO:0043856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium release activated channel regulator 2A","termid":"PBO:0043856"}


id: PATO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's parts or projections being interlocked; for example, the fingers of two hands that are clasped.","definition_xrefs":["PATOC:wdahdul"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interdigitated","termid":"PATO:0001960"}


id: GO:0047234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 raffinose = sucrose + 1F-alpha-D-galactosylraffinose.","definition_xrefs":["EC:2.4.1.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"raffinose-raffinose alpha-galactotransferase activity","secondary_identifiers":["MetaCyc:RXN-11490","RHEA:14125"],"synonyms":[{"name":"raffinose (raffinose donor) galactosyltransferase activity","type":"related"},{"name":"raffinose-raffinose a-galactosyltransferase activity","type":"exact"},{"name":"raffinose-raffinose alpha-galactosyltransferase activity","type":"exact"},{"name":"raffinose:raffinose alpha-D-galactosyltransferase activity","type":"related"},{"name":"raffinose:raffinose alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047234"}


id: GO:1903810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-histidine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:23895341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine transmembrane transport","termid":"GO:0089709"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-histidine import across plasma membrane","secondary_identifiers":["GO:0090466","GO:0061460"],"synonyms":[{"name":"L-histidine import","type":"broad"},{"name":"L-histidine import into cell","type":"exact"},{"name":"histidine import","type":"broad"}],"termid":"GO:1903810"}


id: PBO:0086667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; ORF emerged de novo in thymine-rich ancestral non-genic region, accumulated substantial changes under positive selection, and progressively increased its transmembrane propensity to give rise to a protein that integrates into the endoplasmic reticulum (ER) membrane while retaining potential for adaptive change","termid":"PBO:0086667"}


id: PBO:0047567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 18","termid":"PBO:0047567"}


id: PBO:0034474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_protein_localization_to_double-strand_break_site","termid":"PBO:0034474"}


id: MONDO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete STAG1-related intellectual disability-facial dysmorphism-gastroesophageal reflux syndrome (obsolete MONDO:0044716)","termid":"MONDO:0044716","xrefs":{"Monarch":{"xref_id":"0044716"}}}


id: GO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of a B cell receptor from the plasma membrane to the inside of the cell.","definition_xrefs":["GOC:add","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"B cell receptor internalization","synonyms":[{"name":"B cell receptor uptake of antigen","type":"narrow"},{"name":"BCR endocytosis","type":"exact"},{"name":"BCR receptor internalization","type":"exact"}],"termid":"GO:0036300"}


id: MONDO:0017141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to a constitutional thrombocytopenia (obsolete MONDO:0017141)","secondary_identifiers":["Orphanet:275729"],"synonyms":[{"name":"rare bleeding disorder due to a constitutional thrombocytopenia","type":"exact"},{"name":"rare bleeding disorder due to a quantitative platelet defect","type":"exact"},{"name":"rare coagulopathy due to a constitutional thrombocytopenia","type":"exact"},{"name":"rare coagulopathy due to a quantitative platelet defect","type":"exact"},{"name":"rare hemorrhagic disorder due to a constitutional thrombocytopenia","type":"exact"},{"name":"rare hemorrhagic disorder due to a quantitative platelet defect","type":"exact"}],"termid":"MONDO:0017141","xrefs":{"Monarch":{"xref_id":"0017141"}}}


id: PBO:0049761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C2 pseudogene 1","termid":"PBO:0049761"}


id: MONDO:0011205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium chain 3-ketoacyl-Coa thiolase deficiency","secondary_identifiers":["MEDGEN:356367","MESH:C566566","UMLS:C1865781","OMIM:602199"],"synonyms":[{"name":"Mckat deficiency","type":"related"},{"name":"medium chain 3-ketoacyl-Coa thiolase deficiency","type":"exact"},{"name":"medium-chain 3-ketoacyl-coa thiolase deficiency","type":"related"}],"termid":"MONDO:0011205","xrefs":{"Monarch":{"xref_id":"0011205"}}}


id: PBO:0066105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF domain family member 1C","termid":"PBO:0066105"}


id: GO:0007287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of mitochondria during insect spermatid differentiation to form two masses, which wrap around each other to form a densely packed sphere called the Nebenkern.","definition_xrefs":["ISBN:0879694238","GOC:bf","PMID:9550716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Nebenkern assembly","synonyms":[{"name":"Nebenkern formation","type":"related"}],"termid":"GO:0007287"}


id: PBO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APAF1 interacting protein","termid":"PBO:0039702"}


id: GO:0016320
data:
  {"annotated_genes":["SJAG_02595"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77985],"is_not":false,"summary":null,"term":"GO:0016320"}]},"cv_name":"biological_process","definition":"The joining of 2 or more lipid bilayer membranes that surround the endoplasmic reticulum.","definition_xrefs":["GOC:elh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02595":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum membrane fusion","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ER membrane fusion","type":"exact"}],"termid":"GO:0016320","terms_by_termid":{"GO:0016320":null}}


id: MONDO:0004336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating adenocarcinoma arising from the rectum. It is characterized by the presence of malignant glandular cells with prominent intracytoplasmic mucin. These cells constitute more than 50% of the malignant cellular population.","definition_xrefs":["NCIT:C9168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenocarcinoma","termid":"MONDO:0002169"},{"relation_name":"is_a","term_name":"colorectal signet ring cell carcinoma","termid":"MONDO:0044336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectal signet ring cell adenocarcinoma","secondary_identifiers":["UMLS:C0279654","DOID:7707","MEDGEN:124641"],"synonyms":[{"name":"rectal signet Ring cell adenocarcinoma","type":"exact"},{"name":"rectum signet ring adenocarcinoma","type":"related"},{"name":"rectum signet ring cell carcinoma","type":"exact"},{"name":"signet Ring adenocarcinoma of rectum","type":"exact"},{"name":"signet Ring adenocarcinoma of the rectum","type":"exact"},{"name":"signet Ring cell adenocarcinoma of rectum","type":"exact"},{"name":"signet Ring cell adenocarcinoma of the rectum","type":"exact"}],"termid":"MONDO:0004336","xrefs":{"Monarch":{"xref_id":"0004336"}}}


id: PBO:0061094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK6 homeobox 3","termid":"PBO:0061094"}


id: GO:0047915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-1,4-beta-D-glucosyl-N-acylsphingosine = UDP + D-galactosyl-1,3-beta-N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine.","definition_xrefs":["EC:2.4.1.62","MetaCyc:GANGLIOSIDE-GALACTOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ganglioside galactosyltransferase activity","secondary_identifiers":["RHEA:16773"],"synonyms":[{"name":"GM1-synthase activity","type":"related"},{"name":"UDP galactose-LAC Tet-ceramide alpha-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-GM2 galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-GM2 ganglioside galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine beta-1,3-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetylgalactosaminyl-(N-acetylneuraminyl) galactosyl-glucosyl-ceramide galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-ceramide galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine beta-1,3-D-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphate D-galactose:glycolipid galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-GM2 galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-ceramide galactosyltransferase activity","type":"related"}],"termid":"GO:0047915"}


id: GO:0045683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermis development","synonyms":[{"name":"down regulation of epidermis development","type":"exact"},{"name":"down-regulation of epidermis development","type":"exact"},{"name":"downregulation of epidermis development","type":"exact"},{"name":"inhibition of epidermis development","type":"narrow"},{"name":"negative regulation of epidermal development","type":"exact"},{"name":"negative regulation of hypodermis development","type":"related"}],"termid":"GO:0045683"}


id: PBO:0000043
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homology_type","termid":"PBO:0000043"}


id: GO:0034358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical particle with a hydrophobic core of triglycerides and/or cholesterol esters, surrounded by an amphipathic monolayer of phospholipids, cholesterol and apolipoproteins. Plasma lipoprotein particles transport lipids, which are non-covalently associated with the particles, in the blood or lymph.","definition_xrefs":["GOC:BHF","GOC:expert_pt","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle","termid":"GO:1990777"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"plasma lipoprotein particle","termid":"GO:0034358"}


id: GO:0045821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide catabolic process","termid":"GO:0033123"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of ATP metabolic process","termid":"GO:1903580"},{"relation_name":"positively_regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0005975","GO:0055086","GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycolytic process","synonyms":[{"name":"activation of glycolysis","type":"narrow"},{"name":"stimulation of glycolysis","type":"narrow"},{"name":"up regulation of glycolysis","type":"exact"},{"name":"up-regulation of glycolysis","type":"exact"},{"name":"upregulation of glycolysis","type":"exact"}],"termid":"GO:0045821"}


id: PBO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.33","termid":"PBO:0002517"}


id: MONDO:0008682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Denys-Drash syndrome (DDS) is a rare urogenital disorder characterized by the association of diffuse mesangial sclerosis (DMS), male pseudohermaphroditism with a 46,XY karyotype, and nephroblastoma.","definition_xrefs":["Orphanet:220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Denys-Drash syndrome","secondary_identifiers":["DOID:3764","NANDO:2200116","OMIM:194080","NCIT:C84668","MEDGEN:181980","SCTID:236385009","UMLS:C0950121","MedDRA:10070179","icd11.foundation:904981302","NORD:1044","ICD9:189.0","MESH:D030321","GARD:5576"],"synonyms":[{"name":"DDS","type":"related"},{"name":"Denys Drash syndrome","type":"exact"},{"name":"Denys-Drash syndrome","type":"exact"},{"name":"Denys-Drash syndrome, autosomal dominant, somatic mutation","type":"exact"},{"name":"Drash syndrome","type":"exact"},{"name":"Wilms tumor and pseudo- or true hermaphroditism","type":"related"},{"name":"Wilms tumor and pseudohermaphroditism","type":"exact"},{"name":"Wilms tumour and pseudo- or true hermaphroditism","type":"related"},{"name":"Wilms tumour and pseudohermaphroditism","type":"exact"},{"name":"nephropathy associated with male pseudohermaphroditism and Wilms' tumor","type":"related"},{"name":"nephropathy associated with male pseudohermaphroditism and Wilms' tumour","type":"related"},{"name":"nephropathy, Wilms tumor, and genital anomalies","type":"related"},{"name":"nephrotic syndrome type 4","type":"exact"},{"name":"pseudohermaphroditism, nephron disorder and Wilms' tumor","type":"related"},{"name":"pseudohermaphroditism, nephron disorder and Wilms' tumour","type":"related"}],"termid":"MONDO:0008682","xrefs":{"Monarch":{"xref_id":"0008682"}}}


id: GO:0060748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The branching process in which the mammary gland ducts form tertiary branches off of the secondary branches as part of diestrus and pregnancy.","definition_xrefs":["PMID:18614704","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"mammary gland branching involved in pregnancy","termid":"GO:0060745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tertiary branching involved in mammary gland duct morphogenesis","termid":"GO:0060748"}


id: PBO:0089270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane i-AAA protease complex subunit Yme1","termid":"PBO:0089270"}


id: MONDO:0008899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly syndrome, Guadalajara type 2 is an extremely rare multiple congenital anomaly syndrome characterized by distinctive intrauterine growth retardation, skeletal dysplasia with multiple malformations including camptodactyly of all fingers, bilateral hallux valgus, short second, fourth and fifth toes, hypoplastic patella, microcephaly, low-set ears, short neck, cuboid-shaped vertebral bodies, pectus excavatum, hip dislocation, and hypoplastic pubic region and genitalia. Camptodactyly syndrome, Guadalajara type 2 has been described in two sisters and is most likely transmitted in an autosomal recessive manner. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:1326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camptodactyly syndrome, Guadalajara","termid":"MONDO:0000111"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"camptodactyly syndrome, Guadalajara type 2","secondary_identifiers":["UMLS:C2931680","SCTID:720603002","MESH:C567138","GARD:1068","MEDGEN:419870","OMIM:211920"],"synonyms":[{"name":"Guadalajara camptodactyly syndrome type II","type":"related"},{"name":"camptodactyly syndrome Guadalajara type 2","type":"related"},{"name":"camptodactyly syndrome, Guadalajara, type 2","type":"related"},{"name":"camptodactyly syndrome, Guadalajara, type II","type":"related"}],"termid":"MONDO:0008899","xrefs":{"Monarch":{"xref_id":"0008899"}}}


id: PBO:0050319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 21","termid":"PBO:0050319"}


id: PBO:0090022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown protein, may bind replication origins Abp2","termid":"PBO:0090022"}


id: MONDO:0042981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortic valve stenosis (AVS) is a condition characterized by narrowing of the heart's aortic valve opening. This narrowing prevents the valve from opening fully, which obstructs blood flow from the heart into the aorta, and onward to the rest of the body. AVS can range from mild to severe. Signs and symptoms typically develop when the narrowing of the opening is severe and may include chest pain (angina) or tightness; shortness of breath or fatigue (especially during exertion); feeling faint or fainting; heart palpitations; and heart murmur. Individuals with less severe congenital AVS (present at birth) may not develop symptoms until adulthood. Individuals with severe cases may faint without warning. AVS can have several causes including abnormal development before birth (such as having 1 or 2 valve leaflets instead of 3); calcium build-up on the valve in adulthood; and rheumatic fever.","definition_xrefs":["GARD:0005830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve disorder","termid":"MONDO:0003803"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve stenosis","secondary_identifiers":["MESH:D001024","ICD10CM:I06.0","NCIT:C50462","DOID:1712","ICD9:746.3","SCTID:18546004","SCTID:60573004","ICD9:395.0","SCTID:72011007","GARD:5830","HP:0001650","MEDGEN:1621","NANDO:2200306","UMLS:C0003507","icd11.foundation:956813047"],"synonyms":[{"name":"AS","type":"exact"},{"name":"aortic stenosis","type":"exact"},{"name":"rheumatic aortic stenosis","type":"narrow"},{"name":"rheumatic aortic valve stenosis","type":"narrow"},{"name":"stenosed aortic valve","type":"related"},{"name":"valvular aortic stenosis","type":"related"}],"termid":"MONDO:0042981","xrefs":{"Monarch":{"xref_id":"0042981"}}}


id: PBO:0038651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 1","termid":"PBO:0038651"}


id: GO:0044398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the swelling of soft tissues of the bitten organism as a result of excess water accumulation.","definition_xrefs":["GOC:jl","PMID:20562011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in induction of edema in another organism","synonyms":[{"name":"envenomation resulting in induction of edema in other organism","type":"exact"},{"name":"envenomation resulting in induction of oedema in other organism","type":"exact"}],"termid":"GO:0044398"}


id: PBO:0080366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 21 pseudogene","termid":"PBO:0080366"}


id: SO:0000836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of an mRNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_region","synonyms":[{"name":"mRNA region","type":"exact"}],"termid":"SO:0000836"}


id: PBO:0084102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanyl-nucleotide exchange factor for the small G-protein Sec4p; essential for post-Golgi vesicle transport and for autophagy; associates with the exocyst, via exocyst subunit Sec15p, on secretory vesicles","termid":"PBO:0084102"}


id: GO:0018358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of the chromophore phytochromobilin to phycocyanin or allophycocyanin via S-phytochromobilin-L-cysteine.","definition_xrefs":["RESID:AA0133"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-phytochromobilin linkage via S-phytochromobilin-L-cysteine (obsolete GO:0018358)","termid":"GO:0018358"}


id: MONDO:0026187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic malformation syndrome with short stature (obsolete MONDO:0026187)","secondary_identifiers":["Orphanet:183570"],"termid":"MONDO:0026187","xrefs":{"Monarch":{"xref_id":"0026187"}}}


id: MONDO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of embryonal rhabdomyosarcoma arising from organs with a mucosal epithelial surface. It is characterized by the formation of a cambium layer in the affected tissue and polypoid nodules within an abundant myxoid stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"botryoid rhabdomyosarcoma","secondary_identifiers":["UMLS:C1306574","SCTID:404052009","DOID:3255","NCIT:C9150","MEDGEN:727079","ICD9:171.9"],"synonyms":[{"name":"botryoid sarcoma","type":"exact"},{"name":"botryoid sarcoma (morphologic abnormality)","type":"exact"},{"name":"botryoid-type embryonal rhabdomyosarcoma","type":"exact"},{"name":"sarcoma botryoides","type":"exact"}],"termid":"MONDO:0002578","xrefs":{"Monarch":{"xref_id":"0002578"}}}


id: PBO:0069597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 874, pseudogene","termid":"PBO:0069597"}


id: GO:0009069
data:
  {"annotated_genes":["SJAG_02972","SJAG_01880","SJAG_03914","SJAG_00582","SJAG_01271","SJAG_03861","SJAG_02290","SJAG_02313","SJAG_04449","SJAG_02450","SJAG_00881","SJAG_02791","SJAG_03556","SJAG_00234","SJAG_03152","SJAG_03290","SJAG_01766","SJAG_04305","SJAG_02901","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75871,77121,72383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[110303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019343"},{"annotations":[71689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[71662,73085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[97639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[96169,87171,73936,77699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[73261,70772,115592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[100457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[116718,60709,79338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[112504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016259"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00582":null,"SJAG_00881":null,"SJAG_01271":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02290":null,"SJAG_02313":null,"SJAG_02450":null,"SJAG_02791":null,"SJAG_02901":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03290":null,"SJAG_03556":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"serine family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid metabolism","type":"exact"}],"termid":"GO:0009069","terms_by_termid":{"GO:0006535":null,"GO:0006545":null,"GO:0006546":null,"GO:0006564":null,"GO:0009090":null,"GO:0016259":null,"GO:0019264":null,"GO:0019280":null,"GO:0019343":null,"GO:0019464":null}}


id: MONDO:0001117
data:
  {"annotated_genes":["SJAG_03929","SJAG_04217","SJAG_00235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009606"},{"annotations":[85294,85293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009605"}]},"cv_name":"mondo","definition":"An inherited or acquired condition characterized by abnormally increased levels of methemoglobin in the blood.","definition_xrefs":["NCIT:C34817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobinopathy","termid":"MONDO:0044348"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_03929":null,"SJAG_04217":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"methemoglobinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10027496","SCTID:38959009","MESH:D008708","DOID:10783","ICD9:289.7","MEDGEN:6339","UMLS:C0025637"],"synonyms":[{"name":"methemoglobinemias","type":"exact"}],"termid":"MONDO:0001117","terms_by_termid":{"MONDO:0009605":null,"MONDO:0009606":null},"xrefs":{"Monarch":{"xref_id":"0001117"}}}


id: MONDO:0012196
data:
  {"annotated_genes":["SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85078],"is_not":false,"summary":null,"term":"MONDO:0012196"}]},"cv_name":"mondo","definition":"Any auditory neuropathy in which the cause of the disease is a mutation in the DIAPH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"},{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant auditory neuropathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060690","GARD:18127","MEDGEN:322984","UMLS:C1836743","OMIM:609129","MESH:C563790"],"synonyms":[{"name":"AUNA1","type":"exact"},{"name":"DIAPH3 auditory neuropathy","type":"exact"},{"name":"NSDAN","type":"exact"},{"name":"auditory neuropathy caused by mutation in DIAPH3","type":"exact"},{"name":"auditory neuropathy, autosomal dominant, 1","type":"related"},{"name":"auditory neuropathy, autosomal dominant, type 1","type":"exact"},{"name":"auditory neuropathy, nonsyndromic dominant","type":"related"},{"name":"autosomal dominant auditory neuropathy type 1","type":"exact"},{"name":"nonsyndromic dominant auditory neuropathy","type":"exact"}],"termid":"MONDO:0012196","terms_by_termid":{"MONDO:0012196":null},"xrefs":{"Monarch":{"xref_id":"0012196"}}}


id: GO:0106277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin IXalpha + NADP+ = biliverdin IXalpha + NADPH + H+.","definition_xrefs":["RHEA:15793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliverdin reductase [NAD(P)+] activity","termid":"GO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"biliverdin reductase (NADP+) activity","termid":"GO:0106277"}


id: MONDO:0014765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any wooly hair in which the cause of the disease is a mutation in the KRT25 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"isolated familial wooly hair disorder","termid":"MONDO:0008686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wooly hair, autosomal recessive 3","secondary_identifiers":["UMLS:C4225214","OMIM:616760","GARD:16157","DOID:0111574","MEDGEN:902275"],"synonyms":[{"name":"ARWH3","type":"exact"},{"name":"KRT25 woolly hair (disease)","type":"exact"},{"name":"KRT25 wooly hair (disease)","type":"exact"},{"name":"woolly hair (disease) caused by mutation in KRT25","type":"exact"},{"name":"woolly hair, autosomal recessive 3, with hypotrichosis","type":"related"},{"name":"woolly hair, autosomal recessive type 3","type":"exact"},{"name":"wooly hair (disease) caused by mutation in KRT25","type":"exact"},{"name":"wooly hair, autosomal recessive 3","type":"exact"},{"name":"wooly hair, autosomal recessive 3, with hypotrichosis","type":"related"},{"name":"wooly hair, autosomal recessive type 3","type":"exact"}],"termid":"MONDO:0014765","xrefs":{"Monarch":{"xref_id":"0014765"}}}


id: PBO:0052932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-4","termid":"PBO:0052932"}


id: PBO:0091011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent flavin oxidoreductase, implicated in cellular detoxification from family members","termid":"PBO:0091011"}


id: PBO:0065129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKG1 antisense RNA 1","termid":"PBO:0065129"}


id: MONDO:0008836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia with myoclonic epilepsy and presenile dementia","secondary_identifiers":["OMIM:208700","MESH:C565933","MEDGEN:347924","UMLS:C1859646"],"synonyms":[{"name":"ataxia with myoclonic epilepsy and presenile dementia","type":"exact"}],"termid":"MONDO:0008836","xrefs":{"Monarch":{"xref_id":"0008836"}}}


id: PBO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA Like Protein","termid":"PBO:0025489"}


id: PBO:0087975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Triose phosphate isomerase, abundant glycolytic enzyme; mRNA half-life is regulated by iron availability; transcription is controlled by activators Reb1p, Gcr1p, and Rap1p through binding sites in the 5' non-coding region; inhibition of Tpi1p activity by PEP (phosphoenolpyruvate) stimulates redox metabolism in respiring cells; E104D mutation in human homolog TPI1 causes a rare autosomal disease; human TPI1 can complement yeast null mutant","termid":"PBO:0087975"}


id: PBO:0111349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp10","termid":"PBO:0111349"}


id: PBO:0076713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 19","termid":"PBO:0076713"}


id: MONDO:0017365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kindler syndrome","termid":"MONDO:0008260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary acrokeratotic poikiloderma, Weary type","secondary_identifiers":["icd11.foundation:837824031","Orphanet:2907","MEDGEN:96059","UMLS:C0406556","GARD:18781"],"synonyms":[{"name":"congenital poikiloderma with bullae, Weary type","type":"exact"}],"termid":"MONDO:0017365","xrefs":{"Monarch":{"xref_id":"0017365"}}}


id: GO:0071920
data:
  {"annotated_genes":["SJAG_02037","SJAG_03745","SJAG_04768","SJAG_02720","SJAG_04601"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87231,91990,97911,104080,111090],"is_not":false,"summary":null,"term":"GO:0071920"}]},"cv_name":"cellular_component","definition":"A nuclear body that contains proteins involved in pre-mRNA 3'-end cleavage and polyadenylation, such as DDX1, CSTF2 and CPSFs, as well as the transcription factors TFIIE and TFIIF. Cleavage bodies are localized adjacent to Cajal bodies and are involved in mRNA3'-end processing.","definition_xrefs":["PMID:11598190","PMID:8654386","PMID:10564273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02037":null,"SJAG_02720":null,"SJAG_03745":null,"SJAG_04601":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"cleavage body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071920","terms_by_termid":{"GO:0071920":null}}


id: MONDO:0020438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial septal aneurysm","secondary_identifiers":["MEDGEN:1384602","GARD:19651","Orphanet:99107","SCTID:95440004","UMLS:C4476553"],"termid":"MONDO:0020438","xrefs":{"Monarch":{"xref_id":"0020438"}}}


id: PATO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. cerevisiae mating type.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yeast mating type","termid":"PATO:0001337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saccharomyces cerevisiae mating type","termid":"PATO:0001342"}


id: GO:0015461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete endosomal oligosaccharide transporter (obsolete GO:0015461)","synonyms":[{"name":"endosomal oligosaccharide transporter","type":"exact"}],"termid":"GO:0015461"}


id: MONDO:0005574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurodegenerative disorders involving deposition of abnormal tau protein isoforms (tau proteins) in neurons and glial cells in the brain. Pathological aggregations of tau proteins are associated with mutation of the tau gene on chromosome 17 in patients with alzheimer disease; dementia; parkinsonian disorders; progressive supranuclear palsy (supranuclear palsy, progressive); and corticobasal degeneration.","definition_xrefs":["MESH:D024801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"tauopathy","secondary_identifiers":["DOID:680","EFO:0005815","MEDGEN:181880","UMLS:C0949664"],"termid":"MONDO:0005574","xrefs":{"Monarch":{"xref_id":"0005574"}}}


id: GO:1903581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of basophil degranulation.","definition_xrefs":["GO_REF:0000058","PMID:10880837","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of basophil degranulation","termid":"GO:1903581"}


id: PBO:0068591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 42, pseudogene","termid":"PBO:0068591"}


id: GO:0003692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"left-handed Z-DNA binding","termid":"GO:0003692"}


id: PBO:0002633
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.46","termid":"PBO:0002633"}


id: GO:2000746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defecation rhythm.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defecation","termid":"GO:2000292"},{"relation_name":"regulates","term_name":"defecation rhythm","termid":"GO:0035882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of defecation rhythm","synonyms":[{"name":"regulation of DMP","type":"exact"},{"name":"regulation of defecation behavior","type":"related"},{"name":"regulation of defecation cycle","type":"exact"},{"name":"regulation of defecation motor program","type":"exact"}],"termid":"GO:2000746"}


id: PBO:0003565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNA associated protein Dip2 (predicted)","termid":"PBO:0003565"}


id: MONDO:0004740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperlysinemia (obsolete MONDO:0004740)","termid":"MONDO:0004740","xrefs":{"Monarch":{"xref_id":"0004740"}}}


id: GO:0005911
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects.","definition_xrefs":["GOC:bc","GOC:aruk","GOC:dgh","GOC:hb","GOC:mah","PMID:28096264","PMID:21422226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anchoring junction","termid":"GO:0070161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-cell junction","secondary_identifiers":["NIF_Subcellular:sao1922892319"],"synonyms":[{"name":"cell-cell contact region","type":"broad"},{"name":"cell-cell contact zone","type":"broad"},{"name":"intercellular junction","type":"exact"}],"termid":"GO:0005911"}


id: PBO:0034342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-distributary_of","termid":"PBO:0034342"}


id: MOD:00605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative, C-Terminal/Glutamate/Aspartate sulfonation","definition_xrefs":["Unimod:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:00605"}


id: PBO:0066758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 56","termid":"PBO:0066758"}


id: PBO:0039297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG11 alpha-1,2-mannosyltransferase","termid":"PBO:0039297"}


id: GO:0060011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell proliferation","termid":"GO:0060011"}


id: PBO:0069797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1083, pseudogene","termid":"PBO:0069797"}


id: MONDO:0020682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, spondylodysplastic type","termid":"MONDO:0007526"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 1","secondary_identifiers":["MEDGEN:1646889","DOID:0080738","OMIM:130070","UMLS:C4552003"],"synonyms":[{"name":"EDSSPD1","type":"exact"},{"name":"Ehlers-Danlos syndrome with Short stature and Limb anomalies","type":"exact"},{"name":"Ehlers-Danlos syndrome, progeroid type 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, progeroid type, 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, progeroid type, 1, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 1","type":"exact"},{"name":"PDS, defective biosynthesis of","type":"exact"},{"name":"XGPT deficiency","type":"exact"},{"name":"dermatan sulfate proteoglycan","type":"exact"},{"name":"dermatan sulphate proteoglycan","type":"exact"},{"name":"galactosyltransferase 1 deficiency","type":"exact"},{"name":"proteodermatan sulfate, defective biosynthesis of","type":"exact"},{"name":"xylosylprotein 4-Beta-galactosyltransferase deficiency","type":"exact"}],"termid":"MONDO:0020682","xrefs":{"Monarch":{"xref_id":"0020682"}}}


id: GO:0097565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the caudal and posteriolateral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["PMID:5961344","PMID:16607022","GOC:giardia","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right middle basal body pair","termid":"GO:0097565"}


id: FYPO:0002295
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype in which a cell undergoes mitotic catastrophe (i.e. enters mitosis prematurely and with defective chromosome segregation), entering mitosis when longer than wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe with cut, elongated cell during cellular response to hydroxyurea (obsolete FYPO:0002295)","synonyms":[{"name":"cut with mitotic catastrophe, elongated cell during cellular response to hydroxyurea","type":"exact"},{"name":"mitotic catastrophe with cut, elongated cell during cellular response to HU","type":"exact"},{"name":"mitotic catastrophe with cut, elongated cell during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe with cut, elongated cell during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"mitotic catastrophe with cut, long cell","type":"exact"}],"termid":"FYPO:0002295"}


id: MONDO:0004123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laryngeal small cell carcinoma (obsolete MONDO:0004123)","termid":"MONDO:0004123","xrefs":{"Monarch":{"xref_id":"0004123"}}}


id: PBO:0018091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC amino acid transmembrane transporter (predicted)","termid":"PBO:0018091"}


id: GO:0039653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts transcription of genes into mRNA in its host. For example, symbiont proteins can interfere with host RNA polymerase or with transcription factors. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:1577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host transcription","termid":"GO:0052026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host transcription","synonyms":[{"name":"host transcription shut-off","type":"exact"},{"name":"host transcription shutoff by virus","type":"narrow"},{"name":"suppression by virus of host DNA-dependent transcription","type":"narrow"},{"name":"suppression by virus of host transcription","type":"narrow"}],"termid":"GO:0039653"}


id: PBO:0066885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 185","termid":"PBO:0066885"}


id: PBO:0042872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 107","termid":"PBO:0042872"}


id: PBO:0025442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocystinuria","termid":"PBO:0025442"}


id: GO:0051572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K4 methylation (obsolete GO:0051572)","synonyms":[{"name":"down regulation of histone H3-K4 methylation","type":"exact"},{"name":"down-regulation of histone H3-K4 methylation","type":"exact"},{"name":"downregulation of histone H3-K4 methylation","type":"exact"},{"name":"inhibition of histone H3-K4 methylation","type":"narrow"}],"termid":"GO:0051572"}


id: GO:0052695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of an organic chemical by the conjugation of glucuronic acid. The substances resulting from glucuronidation are known as glucuronosides (or glucuronides) and are often much more water-soluble than the non-glucuronic acid-containing precursor.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular glucuronidation (obsolete GO:0052695)","secondary_identifiers":["Reactome:R-HSA-156588"],"synonyms":[{"name":"cellular glucuronide biosynthesis","type":"exact"},{"name":"cellular glucuronide biosynthetic process","type":"exact"},{"name":"cellular glucuronoside biosynthesis","type":"exact"},{"name":"cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:0052695"}


id: MONDO:0017149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Drug- or toxin-induced pulmonary arterial hypertension (PAH) is a form of pulmonary arterial hypertension (PAH) secondary to the exposition to drugs. Drug- or toxin-induced PAH is characterized by elevated pulmonary arterial resistance leading to right heart failure. Drug or toxin induced PAH is progressive and potentially fatal.","definition_xrefs":["Orphanet:275786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug- or toxin-induced pulmonary arterial hypertension","secondary_identifiers":["GARD:21026","EFO:0009192","MEDGEN:573792","UMLS:C0340544"],"synonyms":[{"name":"drug- or toxin-induced PAH","type":"exact"}],"termid":"MONDO:0017149","xrefs":{"Monarch":{"xref_id":"0017149"}}}


id: PBO:0049475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme M","termid":"PBO:0049475"}


id: PBO:0046369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD4 divergent transcript","termid":"PBO:0046369"}


id: PBO:0041947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 7","termid":"PBO:0041947"}


id: PBO:0044367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, testis, pseudogene","termid":"PBO:0044367"}


id: MONDO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphopenic hypergammaglobulinemia, antibody deficiency, autoimmune hemolytic anemia, and glomerulonephritis","secondary_identifiers":["MEDGEN:340877","UMLS:C1855470","OMIM:247800","MESH:C565427"],"synonyms":[{"name":"lymphopenic hypergammaglobulinemia, antibody deficiency, autoimmune hemolytic anemia, and glomerulonephritis","type":"exact"}],"termid":"MONDO:0009541","xrefs":{"Monarch":{"xref_id":"0009541"}}}


id: GO:0034102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective elimination of erythrocytes from the body by autoregulatory mechanisms.","definition_xrefs":["GOC:add","PMID:12905029","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"erythrocyte homeostasis","termid":"GO:0034101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte clearance","synonyms":[{"name":"RBC clearance","type":"exact"},{"name":"neocytolysis","type":"narrow"},{"name":"red blood cell clearance","type":"exact"}],"termid":"GO:0034102"}


id: MONDO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the ethmoid sinus. Representative examples of benign neoplasms include Schneiderian papilloma and salivary gland-type adenoma. Representative examples of malignant neoplasms include carcinoma and lymphoma.","definition_xrefs":["NCIT:C4416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus neoplasm","termid":"MONDO:0005289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethmoidal sinus neoplasm","secondary_identifiers":["SCTID:126677000","MONDO:0021215","MEDGEN:83386","UMLS:C0345668","DOID:1364"],"synonyms":[{"name":"neoplasm of ethmoid sinus","type":"exact"},{"name":"neoplasm of ethmoidal sinus","type":"exact"},{"name":"ethmoid sinus neoplasm (disease)","type":"exact"},{"name":"ethmoid sinus tumor","type":"exact"},{"name":"ethmoid sinus tumour","type":"exact"},{"name":"ethmoidal sinus neoplasm","type":"exact"},{"name":"ethmoidal sinus tumor","type":"exact"},{"name":"ethmoidal sinus tumour","type":"exact"},{"name":"ethmoid sinus neoplasm","type":"exact"},{"name":"neoplasm of the ethmoid sinus","type":"exact"},{"name":"neoplasm of the ethmoidal sinus","type":"exact"},{"name":"tumor of ethmoid sinus","type":"exact"},{"name":"tumor of ethmoidal sinus","type":"exact"},{"name":"tumor of the ethmoid sinus","type":"exact"},{"name":"tumor of the ethmoidal sinus","type":"exact"},{"name":"tumour of ethmoid sinus","type":"exact"},{"name":"tumour of ethmoidal sinus","type":"exact"},{"name":"tumour of the ethmoid sinus","type":"exact"},{"name":"tumour of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0001764","xrefs":{"Monarch":{"xref_id":"0001764"}}}


id: GO:0052557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont immune response (obsolete GO:0052557)","synonyms":[{"name":"positive regulation by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052557"}


id: PBO:0011085
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, thiamine Km 6 uM","termid":"PBO:0011085"}


id: GO:0034144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 4 signaling pathway","termid":"GO:0034143"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"negative regulation of TLR4 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034144"}


id: GO:1905567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:22848640","GO_REF:0000058","GOC:nc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (obsolete GO:1905567)","synonyms":[{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"narrow"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"}],"termid":"GO:1905567"}


id: PBO:0059686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 52","termid":"PBO:0059686"}


id: PBO:0031563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_binding","termid":"PBO:0031563"}


id: PBO:0053969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1280","termid":"PBO:0053969"}


id: MONDO:0012043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reis-Bücklers corneal dystrophy (RBCD), also known as granular corneal dystrophy type III, is a rare form of superficial corneal dystrophy characterized by bilateral symmetrical reticular opacities in the superficial central cornea, with progressive visual impairment.","definition_xrefs":["Orphanet:98961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Reis-Bucklers corneal dystrophy","secondary_identifiers":["GARD:9276","OMIM:608470","DOID:0060453","SCTID:231930000","MESH:C535476","ICD9:371.52","UMLS:C0339278","MEDGEN:83284"],"synonyms":[{"name":"CDB1","type":"related"},{"name":"CDRB","type":"related"},{"name":"RBCD","type":"exact"},{"name":"Reis Bucklers corneal dystrophy","type":"related"},{"name":"Reis Bucklers dystrophy","type":"related"},{"name":"Reis-Bucklers corneal dystrophy","type":"exact"},{"name":"Reis-Bücklers corneal dystrophy","type":"related"},{"name":"anterior limiting membrane dystrophy type 1","type":"exact"},{"name":"anterior limiting membrane dystrophy type I","type":"exact"},{"name":"atypical granular corneal dystrophy","type":"exact"},{"name":"corneal dystrophy Reis Bucklers type","type":"related"},{"name":"corneal dystrophy geographic","type":"related"},{"name":"corneal dystrophy of Bowman Layer, type 1","type":"related"},{"name":"corneal dystrophy of Bowman layer type 1","type":"exact"},{"name":"corneal dystrophy of Bowman layer type I","type":"exact"},{"name":"corneal dystrophy, REIS-Bucklers type","type":"related"},{"name":"corneal dystrophy, geographic","type":"related"},{"name":"geographic corneal dystrophy","type":"exact"},{"name":"granular corneal dystrophy type 3","type":"exact"},{"name":"granular corneal dystrophy type III","type":"exact"},{"name":"granular corneal dystrophy, type 3","type":"related"},{"name":"superficial granular corneal dystrophy","type":"exact"}],"termid":"MONDO:0012043","xrefs":{"Monarch":{"xref_id":"0012043"}}}


id: PBO:0003834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific cyclin Rem1","termid":"PBO:0003834"}


id: PBO:0064694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 30","termid":"PBO:0064694"}


id: PBO:0045045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf like acrosomal protein 1","termid":"PBO:0045045"}


id: PBO:0071236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 77","termid":"PBO:0071236"}


id: PBO:0050411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D like","termid":"PBO:0050411"}


id: PR:Q9Y7T7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing ATP-dependent RNA helicase prp28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.11","secondary_identifiers":["UniProtKB:Q9Y7T7"],"synonyms":[{"name":"Spom972h-DDX23","type":"exact"}],"termid":"PR:Q9Y7T7"}


id: GO:1902224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ketone body.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091","GO:0006629"],"is_obsolete":false,"name":"ketone body metabolic process","synonyms":[{"name":"ketone body metabolism","type":"exact"}],"termid":"GO:1902224"}


id: GO:1901285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5,6,7,8-tetrahydromethanopterin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00065","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydromethanopterin metabolic process","termid":"GO:1901283"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin biosynthetic process","termid":"GO:2001118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042559","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydromethanopterin biosynthetic process","synonyms":[{"name":"5,6,7,8-tetrahydromethanopterin anabolism","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin biosynthesis","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin formation","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin synthesis","type":"exact"}],"termid":"GO:1901285"}


id: PBO:0062120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 48 pseudogene","termid":"PBO:0062120"}


id: PBO:0066763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 61","termid":"PBO:0066763"}


id: GO:0050392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-vicianin + H2O = mandelonitrile + vicianose.","definition_xrefs":["EC:3.2.1.119","RHEA:14041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"vicianin beta-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R03642","MetaCyc:VICIANIN-BETA-GLUCOSIDASE-RXN"],"synonyms":[{"name":"(R)-vicianin beta-D-glucohydrolase activity","type":"related"},{"name":"vicianin b-glucosidase activity","type":"exact"},{"name":"vicianin hydrolase activity","type":"related"}],"termid":"GO:0050392"}


id: GO:0045992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic development","synonyms":[{"name":"down regulation of embryonic development","type":"exact"},{"name":"down-regulation of embryonic development","type":"exact"},{"name":"downregulation of embryonic development","type":"exact"},{"name":"inhibition of embryonic development","type":"narrow"}],"termid":"GO:0045992"}


id: PBO:0071794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40","termid":"PBO:0071794"}


id: MONDO:0971170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer, hereditary, X-linked 3","secondary_identifiers":["MEDGEN:1861605","UMLS:C5935569","OMIM:301120"],"termid":"MONDO:0971170","xrefs":{"Monarch":{"xref_id":"0971170"}}}


id: PBO:0072863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome associated factor 3, U4/U6 recycling protein","termid":"PBO:0072863"}


id: FYPO:0004568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle","termid":"FYPO:0004568"}


id: GO:0016008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger of the two mitochondrial derivatives that arise by the unfolding of the Nebenkern during flagellum elongation; the major mitochondrial derivative is ovoid and darker than the minor derivative.","definition_xrefs":["PMID:17123504","GOC:mah","PMID:24211517","PMID:30802236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"major mitochondrial derivative","termid":"GO:0016008"}


id: PBO:0057764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2053","termid":"PBO:0057764"}


id: FYPO:0001069
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118991,118989,118990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more mitotic cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of cell cycle phase","termid":"FYPO:0000408"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle phase","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03575","SJAG_03351"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased duration of mitotic cell cycle phase during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle phase","type":"exact"}],"termid":"FYPO:0001069","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0054652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2057","termid":"PBO:0054652"}


id: PR:Q9Y7I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.20 gene.","definition_xrefs":["UniProtKB:Q9Y7I1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B3.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.20","synonyms":[{"name":"Spom972h-SPAC1B3.20","type":"exact"}],"termid":"PR:Q9Y7I1"}


id: GO:1901646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synoviocyte proliferation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of synoviocyte proliferation","termid":"GO:1901645"},{"relation_name":"negatively_regulates","term_name":"synoviocyte proliferation","termid":"GO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synoviocyte proliferation","synonyms":[{"name":"down regulation of synoviocyte proliferation","type":"exact"},{"name":"down-regulation of synoviocyte proliferation","type":"exact"},{"name":"downregulation of synoviocyte proliferation","type":"exact"},{"name":"inhibition of synoviocyte proliferation","type":"narrow"}],"termid":"GO:1901646"}


id: GO:0021522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","PMID:11262869","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"ventral spinal cord development","termid":"GO:0021517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}


id: MONDO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tularemia that involves the lymph node.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymph node disorder","termid":"MONDO:0004928"},{"relation_name":"is_a","term_name":"tularemia","termid":"MONDO:0018077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"glandular tularemia","secondary_identifiers":["DOID:0050382","SCTID:21857006","MEDGEN:546997","UMLS:C0275974"],"synonyms":[{"name":"lymph node tularemia","type":"exact"}],"termid":"MONDO:0000320","xrefs":{"Monarch":{"xref_id":"0000320"}}}


id: GO:0086074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an Purkinje myocyte to a ventricular cardiac muscle cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte-ventricular cardiac muscle cell adhesion involved in cell communication","termid":"GO:0086074"}


id: PBO:0051175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-64","termid":"PBO:0051175"}


id: GO:1901211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"negatively_regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac chamber formation","synonyms":[{"name":"down regulation of cardiac chamber formation","type":"exact"},{"name":"down regulation of heart chamber formation","type":"exact"},{"name":"down-regulation of cardiac chamber formation","type":"exact"},{"name":"down-regulation of heart chamber formation","type":"exact"},{"name":"downregulation of cardiac chamber formation","type":"exact"},{"name":"downregulation of heart chamber formation","type":"exact"},{"name":"inhibition of cardiac chamber formation","type":"narrow"},{"name":"inhibition of heart chamber formation","type":"exact"},{"name":"negative regulation of heart chamber formation","type":"exact"}],"termid":"GO:1901211"}


id: PBO:0075204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 16","termid":"PBO:0075204"}


id: PBO:0079818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin interaction motif containing 1","termid":"PBO:0079818"}


id: GO:1904359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore germination.","definition_xrefs":["GO_REF:0000058","PMID:14718564","PMID:8798577","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spore germination","secondary_identifiers":["GO:0075006"],"synonyms":[{"name":"modulation of spore germination on or near host","type":"narrow"}],"termid":"GO:1904359"}


id: MONDO:0013613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the KCNJ13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 16","secondary_identifiers":["GARD:10885","MEDGEN:481692","OMIM:614186","ICD10CM:H35.5","DOID:0110118","UMLS:C3280062"],"synonyms":[{"name":"KCNJ13 Leber congenital amaurosis","type":"exact"},{"name":"LCA16","type":"exact"},{"name":"Leber congenital amaurosis 16","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in KCNJ13","type":"exact"},{"name":"Leber congenital amaurosis type 16","type":"exact"}],"termid":"MONDO:0013613","xrefs":{"Monarch":{"xref_id":"0013613"}}}


id: PBO:0075682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequestosome 1 pseudogene 1","termid":"PBO:0075682"}


id: GO:0110022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle myoblast proliferation.","definition_xrefs":["GOC:BHF","PMID:26512644","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"regulates","term_name":"cardiac muscle myoblast proliferation","termid":"GO:0110021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle myoblast proliferation","termid":"GO:0110022"}


id: MONDO:0010146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory and suppurating type of tinea capitis, a skin infection caused by Trichophyton or Microsporum fungi, that predominantly affects the scalp and that is characterized by the development of painful crusty lesions covered with follicular pustules and surrounded by erythematous alopecic areas, that can later evolve into abscesses and leave permanent cicatricial alopecia. Lesions can be associated with regional lymphadenopathy.","definition_xrefs":["Orphanet:499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Kerion celsi","secondary_identifiers":["OMIM:275240","GARD:3109","icd11.foundation:1449494917","SCTID:19087001","MEDGEN:124446","UMLS:C0276742"],"synonyms":[{"name":"TINEA imbricata, susceptibility to","type":"related"},{"name":"Tinea capitis profunda","type":"related"},{"name":"Trichophyton infection","type":"related"},{"name":"susceptibility to Tinea imbricata","type":"related"},{"name":"trichophytia profunda barbae","type":"related"},{"name":"trichophytia profunda capitis","type":"related"}],"termid":"MONDO:0010146","xrefs":{"Monarch":{"xref_id":"0010146"}}}


id: SO:0000029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical base pair, where two bases interact via WC edges, with glycosidic bonds oriented cis relative to the axis of orientation.","definition_xrefs":["PMID:12177293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WC_base_pair","synonyms":[{"name":"WC base pair","type":"exact"},{"name":"Watson Crick base pair","type":"exact"},{"name":"Watson-Crick base pair","type":"related"},{"name":"Watson-Crick pair","type":"exact"},{"name":"canonical base pair","type":"exact"}],"termid":"SO:0000029"}


id: PBO:0030234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus_(obsolete_FYPO:0001464)","termid":"PBO:0030234"}


id: PBO:0029105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_valine_level","termid":"PBO:0029105"}


id: PBO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase (predicted)","termid":"PBO:0002028"}


id: GO:0110017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate linear mRNA translation.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"cap-independent translational initiation of linear mRNA","termid":"GO:0110017"}


id: PBO:0088498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein, peroxidase","termid":"PBO:0088498"}


id: MONDO:0025113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of birds which are raised as a source of meat or eggs for human consumption and are usually found in barnyards, hatcheries, etc. The concept is differentiated from bird diseases which is for diseases of birds not considered poultry and usually found in zoos, parks, and the wild.","definition_xrefs":["MESH:D011201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poultry disease","synonyms":[{"name":"disease, poultry","type":"related"},{"name":"diseases, poultry","type":"related"},{"name":"poultry disease","type":"exact"}],"termid":"MONDO:0025113","xrefs":{"Monarch":{"xref_id":"0025113"}}}


id: GO:1903615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:11129957"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein tyrosine phosphatase activity (obsolete GO:1903615)","synonyms":[{"name":"activation of PPT-phosphatase activity","type":"narrow"},{"name":"activation of PTP-phosphatase activity","type":"narrow"},{"name":"activation of PTPase activity","type":"narrow"},{"name":"activation of [phosphotyrosine]protein phosphatase activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"narrow"},{"name":"activation of phosphotyrosine histone phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine protein phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosylprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein tyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphate phosphohydrolase activity","type":"narrow"},{"name":"activation of tyrosine O-phosphate phosphatase activity","type":"narrow"},{"name":"activation of tyrosylprotein phosphatase activity","type":"narrow"},{"name":"positive regulation of PPT-phosphatase activity","type":"exact"},{"name":"positive regulation of PTP-phosphatase activity","type":"exact"},{"name":"positive regulation of PTPase activity","type":"exact"},{"name":"positive regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"positive regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"positive regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"positive regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of PPT-phosphatase activity","type":"exact"},{"name":"up regulation of PTP-phosphatase activity","type":"exact"},{"name":"up regulation of PTPase activity","type":"exact"},{"name":"up regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of PPT-phosphatase activity","type":"exact"},{"name":"up-regulation of PTP-phosphatase activity","type":"exact"},{"name":"up-regulation of PTPase activity","type":"exact"},{"name":"up-regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up-regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up-regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of PPT-phosphatase activity","type":"exact"},{"name":"upregulation of PTP-phosphatase activity","type":"exact"},{"name":"upregulation of PTPase activity","type":"exact"},{"name":"upregulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"upregulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"upregulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"upregulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903615"}


id: FYPO:0007552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein ubiquitination during cellular response to hydroxyurea","synonyms":[{"name":"normal protein ubiquitination during cellular response to HU","type":"exact"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein ubiquitinylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein ubiquitylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein/peptide ubiquitination during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007552"}


id: GO:0016797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674","GO:0004527"],"is_obsolete":false,"name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","secondary_identifiers":["EC:3.1.16.-"],"termid":"GO:0016797"}


id: GO:1904649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fat cell apoptotic process.","definition_xrefs":["PMID:17024416","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"fat cell apoptotic process","termid":"GO:1904606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fat cell apoptotic process","synonyms":[{"name":"regulation of adipocyte apoptosis","type":"narrow"},{"name":"regulation of adipocyte apoptotic process","type":"exact"},{"name":"regulation of adipose cell apoptosis","type":"narrow"},{"name":"regulation of adipose cell apoptotic process","type":"exact"},{"name":"regulation of fat cell apoptosis","type":"narrow"}],"termid":"GO:1904649"}


id: PR:Q09733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gef2 gene.","definition_xrefs":["UniProtKB:Q09733","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor gef2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.16","synonyms":[{"name":"Spom972h-gef2","type":"exact"}],"termid":"PR:Q09733"}


id: MONDO:0015755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopathy with hexagonally cross-linked tubular arrays is a rare, congenital, non-dystrophic, mild, slowly progressive, proximal myopathy characterized by exercise intolerance and post-exercise myalgia without rhabdomyolysis, associated with highly organized hexagonally cross-linked tubular arrays in skeletal muscle biopsy. Additional features may include muscle atrophy (or diffuse hypotrophy), myalgia with or without musclar weakness, paresis of truncal and limb-girdle musculature, minimal ptosis, lumbar hyperlordosis, decreased deep tendon reflexes, contractures and pes equinovarus.","definition_xrefs":["Orphanet:171889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy with hexagonally cross-linked tubular arrays","secondary_identifiers":["UMLS:C4707259","GARD:20129","SCTID:764994007","icd11.foundation:1953170361","MEDGEN:1636081"],"termid":"MONDO:0015755","xrefs":{"Monarch":{"xref_id":"0015755"}}}


id: FYPO:0002182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and spheroid vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and spheroid cells (obsolete FYPO:0002182)","synonyms":[{"name":"inviable mixed population including spores, germinated spores and rounded cells","type":"exact"}],"termid":"FYPO:0002182"}


id: FYPO:0002250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is curved along the long axis, and in which vacuoles are more visible (usually by microscopy) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable curved vacuolated vegetative cell","synonyms":[{"name":"inviable curved vacuolated cell during vegetative growth","type":"exact"},{"name":"inviable curved vacuolated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved vacuolated vegetative cell","type":"exact"}],"termid":"FYPO:0002250"}


id: GO:0051893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of focal adhesion formation, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"is_a","term_name":"regulation of cell-substrate junction assembly","termid":"GO:0090109"},{"relation_name":"regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155","GO:0044085"],"is_obsolete":false,"name":"regulation of focal adhesion assembly","synonyms":[{"name":"regulation of adhesion plaque assembly","type":"related"}],"termid":"GO:0051893"}


id: PBO:0073299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 21","termid":"PBO:0073299"}


id: GO:0090698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after plant embryonic development, by which anatomical structures are generated and organized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic plant morphogenesis","termid":"GO:0090698"}


id: MONDO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the ascending colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"ascending colon cancer","secondary_identifiers":["SCTID:363412000","MEDGEN:509293","UMLS:C0153439","DOID:218","ICD9:153.6"],"synonyms":[{"name":"Ca ascending colon","type":"exact"},{"name":"ascending colon cancer","type":"exact"},{"name":"cancer of ascending colon","type":"exact"},{"name":"malignant ascending colon neoplasm","type":"exact"},{"name":"malignant neoplasm of ascending colon","type":"exact"},{"name":"malignant neoplasm of right colon","type":"exact"},{"name":"malignant tumor of ascending colon","type":"exact"},{"name":"malignant tumour of ascending colon","type":"exact"}],"termid":"MONDO:0002238","xrefs":{"Monarch":{"xref_id":"0002238"}}}


id: GO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which sodium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium channel complex","termid":"GO:0034706"}


id: MONDO:1012207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perosomus elumbis, non-human animal","termid":"MONDO:1011668"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, dog","secondary_identifiers":["OMIA:000789-9615"],"termid":"MONDO:1012207","xrefs":{"Monarch":{"xref_id":"1012207"}}}


id: PBO:0076127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine/tyrosine interacting like 1","termid":"PBO:0076127"}


id: PBO:0042036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 89","termid":"PBO:0042036"}


id: MONDO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the cardia of stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cardia cancer","secondary_identifiers":["UMLS:C0153417","ICD9:151.0","DOID:10548","MEDGEN:509280","SCTID:187732006"],"synonyms":[{"name":"Ca cardia - stomach","type":"exact"},{"name":"cancer of cardia of stomach","type":"exact"},{"name":"cardia of stomach cancer","type":"exact"},{"name":"malignant cardia of stomach neoplasm","type":"exact"},{"name":"malignant neoplasm of cardia of stomach","type":"exact"}],"termid":"MONDO:0001063","xrefs":{"Monarch":{"xref_id":"0001063"}}}


id: GO:0005635
data:
  {"annotated_genes":["SJAG_02424","SJAG_04884","SJAG_02980","SJAG_02757","SJAG_01227","SJAG_01422","SJAG_04366","SJAG_00471","SJAG_01789","SJAG_03729","SJAG_02210","SJAG_01584","SJAG_04411","SJAG_04429","SJAG_00054","SJAG_00298","SJAG_03847","SJAG_03907","SJAG_00416","SJAG_01909","SJAG_02514","SJAG_03959","SJAG_03182","SJAG_04721","SJAG_01745","SJAG_05226","SJAG_02214","SJAG_05207","SJAG_00680","SJAG_03449","SJAG_02655","SJAG_05196","SJAG_01242","SJAG_04394","SJAG_02885","SJAG_00946","SJAG_04010","SJAG_00586","SJAG_03227","SJAG_03715","SJAG_00840","SJAG_01833","SJAG_03321","SJAG_01374","SJAG_01410","SJAG_03891","SJAG_02815","SJAG_04379","SJAG_01834","SJAG_04841","SJAG_02337","SJAG_03525","SJAG_03508","SJAG_03491","SJAG_01014","SJAG_02094","SJAG_02520","SJAG_01356","SJAG_01737","SJAG_00962","SJAG_03592","SJAG_04148","SJAG_00521","SJAG_04783","SJAG_00053","SJAG_00594","SJAG_03299","SJAG_03989","SJAG_04187","SJAG_04191","SJAG_00790","SJAG_03892","SJAG_03795","SJAG_04472","SJAG_01981","SJAG_01131","SJAG_01263","SJAG_05740","SJAG_04284","SJAG_01722","SJAG_00753","SJAG_04464","SJAG_01358","SJAG_01185","SJAG_04319","SJAG_00968","SJAG_01534","SJAG_02998","SJAG_03783","SJAG_02651","SJAG_03803","SJAG_02661","SJAG_03125","SJAG_00762","SJAG_00641","SJAG_05243","SJAG_03200","SJAG_00810","SJAG_01460","SJAG_03662","SJAG_00479","SJAG_00205","SJAG_03693","SJAG_03850","SJAG_01695","SJAG_04489","SJAG_01538","SJAG_03470","SJAG_03812","SJAG_03593","SJAG_00178","SJAG_03300","SJAG_03103","SJAG_03281","SJAG_03251","SJAG_04480","SJAG_02274","SJAG_04888","SJAG_01083","SJAG_02248","SJAG_05303","SJAG_01013","SJAG_00375","SJAG_04578","SJAG_01581","SJAG_00093","SJAG_04017","SJAG_03448","SJAG_02425","SJAG_01065","SJAG_04558","SJAG_04645","SJAG_03986","SJAG_03837","SJAG_00941","SJAG_01293","SJAG_04969","SJAG_03657","SJAG_00900","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69508,69705,71015,71239,72549,75447,78223,87867,88599,88827,89292,89932,90159,91117,91486,92813,92971,93156,93752,94408,95146,95518,95992,96267,97051,97478,98441,98837,99616,99617,102342,102536,102932,103165,103666,103899,103991,104115,104330,104525,104658,104687,104834,105927,106357,106730,106770,106872,107338,107905,108402,108434,108465,108930,109385,110255,113028,114773,114962,115634,115955,116840,117303,117486,118506,119270,119272,119280],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[112639],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034993"},{"annotations":[70232],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034992"},{"annotations":[103514,114513,87699,97733,100674],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180028"},{"annotations":[118964],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120321"},{"annotations":[69814,102601,103195,77546,117980,93594],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005637"},{"annotations":[88748,91267,110650,91699,89251,114704,118929,103245,76183,96483,89171,60259,66736,118931,92852,90700],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031965"},{"annotations":[75830,117371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"},{"annotations":[88270],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005640"},{"annotations":[90834,75492,74090,78469,79371,107563,119204,119205,91683,101749,117197,119248,119329,89572,103447,119330,119334,119328,103389,118952,57607,69712,95885,76452,105543,87117,67890],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005643"},{"annotations":[101178,75843,76783,70531,93743,79802],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044613"},{"annotations":[102782,75202,93744,74459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044614"},{"annotations":[74818,75973,70204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044611"},{"annotations":[102783],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044612"},{"annotations":[115354,60627,75844,94736,88742,114695],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044615"},{"annotations":[71424,73290,88752,77817,72750,73757,70027,109659,72554,80119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031080"},{"annotations":[73785,119312],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070762"},{"annotations":[102603,96484],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; 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id: PATO:0001482
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent","termid":"PATO:0001482"}


id: FYPO:0004983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to vorinostat. Cells stop growing (and may die) at a concentration of vorinostat that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to vorinostat","synonyms":[{"name":"hypersensitive to vorinostat","type":"exact"},{"name":"sensitive to N-hydroxy-N'-phenyloctanediamide","type":"exact"},{"name":"sensitive to SAHA","type":"exact"},{"name":"sensitive to suberoylanilide hydroxamic acid","type":"exact"},{"name":"sensitive to vorinostat during mitotic cell cycle","type":"related"},{"name":"sensitive to vorinostat during vegetative growth","type":"exact"}],"termid":"FYPO:0004983"}


id: PBO:0040123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 9 pseudogene 1","termid":"PBO:0040123"}


id: PBO:0057852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3163","termid":"PBO:0057852"}


id: PBO:0002462
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  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin BimC subfamily","termid":"PBO:0002462"}


id: GO:0044535
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain 2,3-saturated fatty acyl-CoA + O2 = a very-long-chain (2E)-enoyl-CoA + H2O2.","definition_xrefs":["PMID:17458872","RHEA:78847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"very-long-chain fatty acyl-CoA oxidase activity","synonyms":[{"name":"VLC fatty-acyl-CoA oxidase activity","type":"exact"},{"name":"very long chain fatty-acyl-CoA oxidase activity","type":"exact"},{"name":"very-long-chain acyl-CoA oxidase activity","type":"exact"}],"termid":"GO:0044535"}


id: GO:0010762
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"fibroblast migration","termid":"GO:0010761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast migration","synonyms":[{"name":"regulation of fibroblast cell migration","type":"exact"}],"termid":"GO:0010762"}


id: GO:0006045
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylglucosamine metabolic process","termid":"GO:0006044"},{"relation_name":"is_a","term_name":"glucosamine-containing compound biosynthetic process","termid":"GO:1901073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylglucosamine biosynthetic process","synonyms":[{"name":"N-acetylglucosamine anabolism","type":"exact"},{"name":"N-acetylglucosamine biosynthesis","type":"exact"},{"name":"N-acetylglucosamine formation","type":"exact"},{"name":"N-acetylglucosamine synthesis","type":"exact"}],"termid":"GO:0006045"}


id: MONDO:0018967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic agammaglobulinemia","termid":"MONDO:0016463"},{"relation_name":"is_a","term_name":"congenital agammaglobulinemia","termid":"MONDO:0001902"},{"relation_name":"is_a","term_name":"isolated growth hormone deficiency type III","termid":"MONDO:0010615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"short stature due to isolated growth hormone deficiency with X-linked hypogammaglobulinemia","secondary_identifiers":["GARD:16538","Orphanet:632"],"termid":"MONDO:0018967","xrefs":{"Monarch":{"xref_id":"0018967"}}}


id: PBO:0080789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC1 N-terminal domain containing 1, N-terminal like","termid":"PBO:0080789"}


id: GO:1903527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane tubulation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pm","PMID:18388313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of membrane tubulation","termid":"GO:1903525"},{"relation_name":"positively_regulates","term_name":"plasma membrane tubulation","termid":"GO:0097320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane tubulation","synonyms":[{"name":"activation of membrane tubulation","type":"narrow"},{"name":"activation of plasma membrane tubulation","type":"narrow"},{"name":"positive regulation of plasma membrane tubulation","type":"exact"},{"name":"up regulation of membrane tubulation","type":"exact"},{"name":"up regulation of plasma membrane tubulation","type":"exact"},{"name":"up-regulation of membrane tubulation","type":"exact"},{"name":"up-regulation of plasma membrane tubulation","type":"exact"},{"name":"upregulation of membrane tubulation","type":"exact"},{"name":"upregulation of plasma membrane tubulation","type":"exact"}],"termid":"GO:1903527"}


id: PBO:0076048
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 2","termid":"PBO:0076048"}


id: GO:0005611
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3, beta1 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-6 complex","synonyms":[{"name":"laminin-311 complex","type":"exact"},{"name":"laminin-6A complex","type":"exact"}],"termid":"GO:0005611"}


id: PBO:0074274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen like 1","termid":"PBO:0074274"}


id: FYPO:0001790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which plasmids are lost at the same frequency as in wild-type cells. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell phenotype","termid":"FYPO:0000002"},{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal plasmid loss","termid":"FYPO:0001790"}


id: PBO:0041505
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13 open reading frame 46","termid":"PBO:0041505"}


id: MONDO:0003302
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurofibroma with epithelioid morphology.","definition_xrefs":["NCIT:C6558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid neurofibroma","secondary_identifiers":["ICD9:215.9","MEDGEN:226902","SCTID:404032008","UMLS:C1275264","DOID:5149"],"synonyms":[{"name":"epithelioid neurofibroma","type":"exact"}],"termid":"MONDO:0003302","xrefs":{"Monarch":{"xref_id":"0003302"}}}


id: PBO:0038874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 1","termid":"PBO:0038874"}


id: PBO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.4","termid":"PBO:0002639"}


id: MONDO:1010138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, non-human animal","secondary_identifiers":["OMIA:001188"],"termid":"MONDO:1010138","xrefs":{"Monarch":{"xref_id":"1010138"}}}


id: PBO:0039839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 9","termid":"PBO:0039839"}


id: SO:1000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation changes, usually destroys, the first coding triplet of a gene. Usually prevents translation although another initiator codon may be used.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000055 sequence_variant_causing_initiator_codon_change_in_transcript (obsolete SO:1000055)","synonyms":[{"name":"mutation causing initiator codon change in transcript","type":"related"},{"name":"sequence variant causing initiator codon change in transcript","type":"exact"}],"termid":"SO:1000055"}


id: GO:1905372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ceramide phosphoethanolamine.","definition_xrefs":["GOC:TermGenie","GOC:hjd","GO_REF:0000068","PMID:25667419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"ceramide phosphoethanolamine metabolic process","termid":"GO:1905371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ceramide phosphoethanolamine catabolic process","synonyms":[{"name":"ceramide phosphoethanolamine breakdown","type":"exact"},{"name":"ceramide phosphoethanolamine catabolism","type":"exact"},{"name":"ceramide phosphoethanolamine degradation","type":"exact"}],"termid":"GO:1905372"}


id: PBO:0059298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L47","termid":"PBO:0059298"}


id: PBO:0090787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit Swc2","termid":"PBO:0090787"}


id: MONDO:0020094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of disease with diffuse palmoplantar keratoderma as a major feature.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant disease with diffuse palmoplantar keratoderma as a major feature (obsolete MONDO:0020094)","secondary_identifiers":["Orphanet:98352"],"synonyms":[{"name":"autosomal dominant disease with diffuse palmoplantar hyperkeratosis as a major feature","type":"exact"},{"name":"disease with diffuse palmoplantar keratoderma as a major feature, autosomal dominant","type":"exact"}],"termid":"MONDO:0020094","xrefs":{"Monarch":{"xref_id":"0020094"}}}


id: PBO:0004873
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates spo12","termid":"PBO:0004873"}


id: PBO:0002708
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cofilin","termid":"PBO:0002708"}


id: PBO:0056572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK regulated corepressor interacting protein 1","termid":"PBO:0056572"}


id: GO:0071503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heparin stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heparin","termid":"GO:0071503"}


id: GO:0010041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(III) ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron ion","termid":"GO:0010039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron(III) ion","synonyms":[{"name":"response to iron(III)","type":"exact"}],"termid":"GO:0010041"}


id: GO:0019843
data:
  {"annotated_genes":["SJAG_02477","SJAG_01568","SJAG_02372","SJAG_00083","SJAG_04900","SJAG_02427","SJAG_03053","SJAG_04492","SJAG_03252","SJAG_04281","SJAG_04414","SJAG_01132","SJAG_02024","SJAG_02508","SJAG_03197","SJAG_00253","SJAG_01468","SJAG_00566","SJAG_05248","SJAG_04304","SJAG_04066","SJAG_00315","SJAG_04689","SJAG_04324","SJAG_00544","SJAG_00034","SJAG_00748","SJAG_00523","SJAG_00782","SJAG_00945","SJAG_01201","SJAG_03297","SJAG_01387","SJAG_00465","SJAG_00629","SJAG_00067","SJAG_03326","SJAG_04754","SJAG_02312","SJAG_00503","SJAG_04767","SJAG_02359","SJAG_01194","SJAG_00069","SJAG_04108","SJAG_04342","SJAG_03952","SJAG_00889","SJAG_00166","SJAG_02861","SJAG_04188","SJAG_02535","SJAG_02840","SJAG_02530","SJAG_01087","SJAG_04663","SJAG_02723","SJAG_04847","SJAG_02280","SJAG_01478","SJAG_00323","SJAG_00513"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58929,61205,64079,64410,64579,65260,66285,66734,67003,67530,69140,69484,70834,71643,71896,71964,72287,75453,76640,77004,77832,78169,89763,95117,96114,96115,96625,100954,102102,105231,105232,105532,105533,106511,109346,110184,112124,112125,114007,114008,115400],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[70763,71948,71876,88667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008097"},{"annotations":[76364,69997,74414,70866,79692,114288,74037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070180"},{"annotations":[106462,73319,69206,113710,59306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042134"},{"annotations":[77534,96399,70428,70480,115825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070181"}]},"cv_name":"molecular_function","definition":"Binding to a ribosomal RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00067":null,"SJAG_00069":null,"SJAG_00083":null,"SJAG_00166":null,"SJAG_00253":null,"SJAG_00315":null,"SJAG_00323":null,"SJAG_00465":null,"SJAG_00503":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00566":null,"SJAG_00629":null,"SJAG_00748":null,"SJAG_00782":null,"SJAG_00889":null,"SJAG_00945":null,"SJAG_01087":null,"SJAG_01132":null,"SJAG_01194":null,"SJAG_01201":null,"SJAG_01387":null,"SJAG_01468":null,"SJAG_01478":null,"SJAG_01568":null,"SJAG_02024":null,"SJAG_02280":null,"SJAG_02312":null,"SJAG_02359":null,"SJAG_02372":null,"SJAG_02427":null,"SJAG_02477":null,"SJAG_02508":null,"SJAG_02530":null,"SJAG_02535":null,"SJAG_02723":null,"SJAG_02840":null,"SJAG_02861":null,"SJAG_03053":null,"SJAG_03197":null,"SJAG_03252":null,"SJAG_03297":null,"SJAG_03326":null,"SJAG_03952":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04188":null,"SJAG_04281":null,"SJAG_04304":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04663":null,"SJAG_04689":null,"SJAG_04754":null,"SJAG_04767":null,"SJAG_04847":null,"SJAG_04900":null,"SJAG_05248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"rRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000944"],"synonyms":[{"name":"base pairing with rRNA","type":"narrow"}],"termid":"GO:0019843","terms_by_termid":{"GO:0008097":null,"GO:0019843":null,"GO:0042134":null,"GO:0070180":null,"GO:0070181":null}}


id: FYPO:0003133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"},{"relation_name":"is_a","term_name":"decreased cell wall galactomannan level","termid":"FYPO:0002265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002946","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"galactomannan absent from cell wall","synonyms":[{"name":"galactomannan absent from cell surface","type":"related"},{"name":"galactomannan absent from cell wall during mitotic cell cycle","type":"related"},{"name":"galactomannan absent from cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0003133"}


id: GO:0032017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Ran protein signal transduction (obsolete GO:0032017)","synonyms":[{"name":"activation of Ran protein signal transduction","type":"narrow"},{"name":"stimulation of Ran protein signal transduction","type":"narrow"},{"name":"up regulation of Ran protein signal transduction","type":"exact"},{"name":"up-regulation of Ran protein signal transduction","type":"exact"},{"name":"upregulation of Ran protein signal transduction","type":"exact"}],"termid":"GO:0032017"}


id: GO:0032285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a non-myelinating glial cell membrane closes around an axon.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-myelinated axon ensheathment","synonyms":[{"name":"ensheathment of non-myelinated axons","type":"exact"}],"termid":"GO:0032285"}


id: PBO:0046874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule D","termid":"PBO:0046874"}


id: PBO:0079093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 6-1","termid":"PBO:0079093"}


id: GO:0005715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes in pachytene during meiosis I.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination nodule","termid":"GO:0005713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"late recombination nodule","termid":"GO:0005715"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["RHEA:17013","EC:5.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["KEGG_REACTION:R00661","MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: MOD:00544
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 6x(13)C labeled residue.","definition_xrefs":["Unimod:188","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled residue","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:00544"}


id: MONDO:0002765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A verrucous carcinoma that involves the plantar part of pes.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"plantar verrucous skin carcinoma","secondary_identifiers":["DOID:3751","UMLS:C0349657","MEDGEN:578859","NCIT:C6811"],"synonyms":[{"name":"plantar part of pes verrucous carcinoma","type":"exact"},{"name":"plantar verrucous carcinoma of skin","type":"exact"},{"name":"plantar verrucous carcinoma of the skin","type":"exact"},{"name":"plantar verrucous skin carcinoma","type":"exact"}],"termid":"MONDO:0002765","xrefs":{"Monarch":{"xref_id":"0002765"}}}


id: MONDO:0005420
data:
  {"annotated_genes":["SJAG_01941","SJAG_01926","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026731"},{"annotations":[85444,85445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010134"}]},"cv_name":"mondo","definition":"Abnormally low levels of thyroid hormone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0020676","ICD9:244.9","SCTID:40930008","EFO:0004705","NCIT:C26800","DOID:1459","icd11.foundation:1722092627","MESH:D007037","MEDGEN:6991","NANDO:2100120"],"synonyms":[{"name":"hypothyroid","type":"related"},{"name":"hypothyroidism","type":"exact"},{"name":"thyroid deficiency","type":"exact"},{"name":"thyroid insufficiency","type":"exact"},{"name":"underactive thyroid","type":"exact"}],"termid":"MONDO:0005420","terms_by_termid":{"MONDO:0010134":null,"MONDO:0026731":null},"xrefs":{"Monarch":{"xref_id":"0005420"}}}


id: GO:0035281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transport of pre-microRNAs (pre-miRNAs) from the nucleus to the cytoplasm. Pre-miRNAs are a ~60-70 nucleotide stem loop intermediate in miRNA production, produced by the nuclear cleavage of a primary miRNA (pri-mRNA) transcript. Pre-miRNAs are transported from the nucleus to the cytoplasm where further cleavage occurs to produce a mature miRNA product.","definition_xrefs":["PMID:14744438","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"part_of","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pre-miRNA export from nucleus","synonyms":[{"name":"pre-microRNA export from cell nucleus","type":"exact"},{"name":"pre-microRNA export from nucleus","type":"related"},{"name":"pre-microRNA export out of nucleus","type":"exact"},{"name":"pre-microRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"pre-microRNA-nucleus export","type":"exact"}],"termid":"GO:0035281"}


id: PBO:0031708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_mitotic_cell_cycle_progression","termid":"PBO:0031708"}


id: PBO:0060169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal triglyceride transfer protein","termid":"PBO:0060169"}


id: PBO:0048268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 6","termid":"PBO:0048268"}


id: GO:0010310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["PMID:14765119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010310"}


id: GO:0070266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed necrotic cell death process which begins when a cell receives a signal (e.g. a ligand binding to a death receptor or to a Toll-like receptor), and proceeds through a series of biochemical events (signaling pathways), characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3) and by critical dependence on mixed lineage kinase domain-like (MLKL), and which typically lead to common morphological features of necrotic cell death. The process ends when the cell has died. The process is divided into a signaling phase, and an execution phase, which is triggered by the former.","definition_xrefs":["PMID:21876153","GOC:tb","GOC:mtg_apoptosis","GOC:BHF","GOC:dph","PMID:20823910","PMID:18846107","GOC:mah","PMID:21737330","PMID:21760595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"necroptotic process","secondary_identifiers":["GO:0060553","GO:0060555","Reactome:R-HSA-5213460","GO:0060554"],"synonyms":[{"name":"PARP-dependent cell death","type":"related"},{"name":"RIPK1-mediated regulated necrosis","type":"exact"},{"name":"TNF-induced necroptosis","type":"narrow"},{"name":"activation of necroptosis","type":"related"},{"name":"activation of necroptosis by extracellular signals","type":"related"},{"name":"activation of necroptosis in response to extracellular signals","type":"related"},{"name":"activation of necroptosis of activated-T cells","type":"related"},{"name":"establishment of necroptosis","type":"related"},{"name":"establishment of necroptosis of activated-T cells","type":"related"},{"name":"extracellular signal-induced necroptosis","type":"related"},{"name":"induction of necroptosis","type":"broad"},{"name":"induction of necroptosis by extracellular signals","type":"broad"},{"name":"induction of necroptosis of activated-T cells","type":"broad"},{"name":"necroptosis","type":"narrow"},{"name":"parthanatos","type":"related"},{"name":"programmed necrosis","type":"broad"},{"name":"programmed necrotic cell death","type":"broad"}],"termid":"GO:0070266"}


id: MONDO:0019538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that is caused by stress.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Gaisbock syndrome","secondary_identifiers":["icd11.foundation:533704171","Orphanet:90041","MedDRA:10053885","DOID:2838","NCIT:C27174","MEDGEN:745735","UMLS:C2242785","MedDRA:10042217","GARD:19104","SCTID:36874002"],"synonyms":[{"name":"Gaisbock's syndrome","type":"exact"},{"name":"Gaisboeck's syndrome","type":"related"},{"name":"GaisböCK syndrome","type":"related"},{"name":"Pseudopolycythaemia","type":"related"},{"name":"Pseudopolycythemia","type":"related"},{"name":"polycythemia, emotional","type":"exact"},{"name":"stress erythrocytosis","type":"exact"},{"name":"stress polycythemia","type":"exact"}],"termid":"MONDO:0019538","xrefs":{"Monarch":{"xref_id":"0019538"}}}


id: MONDO:0008122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete olivopontocerebellar atrophy 5 (obsolete MONDO:0008122)","termid":"MONDO:0008122","xrefs":{"Monarch":{"xref_id":"0008122"}}}


id: PBO:0066646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 4","termid":"PBO:0066646"}


id: GO:0097187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of dentin, the mineralized tissue that constitutes the major bulk of teeth. Dentin may be one of three types: primary dentin, secondary dentin, and tertiary dentin.","definition_xrefs":["PMID:10206335","GOC:sl","GOC:cjm","PMID:21196346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentinogenesis","synonyms":[{"name":"dentin development","type":"exact"},{"name":"dentine development","type":"exact"}],"termid":"GO:0097187"}


id: PBO:0083050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p; may contribute to regulation of protein degradation by deubiquitylating substrates that have been ubiquitylated by Ufd2p; member of the Ovarian Tumor (OTU) family; protein abundance increases in response to DNA replication stress","termid":"PBO:0083050"}


id: GO:1901655
data:
  {"annotated_genes":["SJAG_01162","SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[105022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ketone stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01162":null,"SJAG_02960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ketone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901655","terms_by_termid":{"GO:0036245":null,"GO:0140041":null}}


id: PBO:0051184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-75 (pseudogene)","termid":"PBO:0051184"}


id: MONDO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple congenital anomalies-hypotonia-seizures syndrome (obsolete MONDO:0000142)","termid":"MONDO:0000142","xrefs":{"Monarch":{"xref_id":"0000142"}}}


id: GO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. This reaction requires the binding of double-stranded RNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase activity","secondary_identifiers":["MetaCyc:RXN-13648","Reactome:R-HSA-8985091","EC:2.7.7.84","Reactome:R-HSA-8985104","RHEA:34407","Reactome:R-HSA-8983680"],"synonyms":[{"name":"(2-5')oligo(A) synthetase activity","type":"exact"},{"name":"2'-5' oligoadenylate synthetase activity","type":"exact"},{"name":"2-5A synthetase activity","type":"exact"},{"name":"oligo-2',5'-adenylate synthetase activity","type":"exact"}],"termid":"GO:0001730"}


id: PBO:0077242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 3","termid":"PBO:0077242"}


id: GO:0000829
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033857"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + diphospho-1D-myo-inositol-pentakisphosphate = ADP + bis(diphospho)-1D-myo-inositol-tetrakisphosphate. The isomeric configurations of the diphospho-1D-myo-inositol-pentakisphosphate (PP-IP5) and bis(diphospho)-1D-myo-inositol-tetrakisphosphate (bis-PP-IP4) are unknown.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1855157","Reactome:R-HSA-1855194","Reactome:R-HSA-1855182"],"synonyms":[{"name":"PP-IP5 kinase activity","type":"exact"},{"name":"inositol heptakisphosphate kinase activity","type":"exact"}],"termid":"GO:0000829","terms_by_termid":{"GO:0033857":null}}


id: PBO:0113069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1-70K, which has been linked to several types of autoimmune and neurodegenerative diseases","termid":"PBO:0113069"}


id: MONDO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung disorder that is mainly associated with chronic allograft dysfunction after lung transplantation and that is characterized by inflammation and fibrosis of bronchiolar walls that reduce the diameter of the bronchioles and result in progressive and irreversible airflow obstruction.","definition_xrefs":["Orphanet:1303"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"},{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiolitis obliterans syndrome","secondary_identifiers":["SCTID:40100001","UMLS:C0006272","MEDGEN:665","ICD9:466.19","HP:0011946","NANDO:1200745","DOID:2799","EFO:0007183","GARD:5961","ICD9:491.8","icd11.foundation:592711730","NANDO:2100039","NANDO:2200209"],"synonyms":[{"name":"BO","type":"related"},{"name":"BOOP","type":"exact"},{"name":"bronchiolitis exudativa","type":"related"},{"name":"bronchiolitis fibrosa obliterans","type":"exact"},{"name":"bronchiolitis obliterans","type":"related"},{"name":"bronchiolitis obliterans with obstructive pulmonary disease","type":"narrow"},{"name":"constrictive bronchiolitis","type":"exact"},{"name":"obliterative bronchiolitis","type":"related"},{"name":"organised pneumonia","type":"exact"},{"name":"organising pneumonia","type":"related"},{"name":"organized pneumonia","type":"exact"},{"name":"organizing pneumonia","type":"related"}],"termid":"MONDO:0015265","xrefs":{"Monarch":{"xref_id":"0015265"}}}


id: MONDO:0015054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary angioedema type 2 (HAE 2) is a form of hereditary angioedema characterized by acute edema in subcutaneous tissues, viscera and/or the upper airway.","definition_xrefs":["Orphanet:100051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema with C1Inh deficiency","termid":"MONDO:0033946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema type 2","secondary_identifiers":["UMLS:C0398776","GARD:16934","MEDGEN:585077"],"synonyms":[{"name":"HAE 2","type":"exact"},{"name":"HAE-II","type":"exact"},{"name":"hereditary angioneurotic edema type 2","type":"exact"},{"name":"hereditary angioneurotic oedema type 2","type":"exact"}],"termid":"MONDO:0015054","xrefs":{"Monarch":{"xref_id":"0015054"}}}


id: PATO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a cytoplasm that contains fluid filled cavities.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolated","termid":"PATO:0000941"}


id: PBO:0001223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA synthetase Mse1 (predicted)","termid":"PBO:0001223"}


id: PBO:0085938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mtc2 is synthetically sick with cdc13-1","termid":"PBO:0085938"}


id: MONDO:0013321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forsythe-wakeling syndrome","secondary_identifiers":["UMLS:C3150859","OMIM:613606","MEDGEN:462209"],"synonyms":[{"name":"FORSYTHE-WAKELING syndrome","type":"related"},{"name":"FWS","type":"exact"},{"name":"microcephaly and Growth retardation with childhood-onset nephrotic syndrome and thrombocytopenia","type":"related"}],"termid":"MONDO:0013321","xrefs":{"Monarch":{"xref_id":"0013321"}}}


id: PBO:0085206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer mitochondrial membrane GTPase, subunit of the ERMES complex; potential regulatory subunit of the ERMES complex that links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria; ortholog of metazoan Miro GTPases","termid":"PBO:0085206"}


id: PBO:0079357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3c","termid":"PBO:0079357"}


id: PBO:0089153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit Vps16","termid":"PBO:0089153"}


id: PBO:0027958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027958"}


id: GO:0009772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, Q) through a chain of electron transport molecules in the thylakoid membrane until they reach the ultimate electron acceptor of Photosystem II, which is plastocyanin (PC). The electron is then passed to the P700 chlorophyll a molecules of the reaction centre of photosystem I.","definition_xrefs":["GOC:jid","ISBN:0716731363","ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic electron transport chain","termid":"GO:0009767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthetic electron transport in photosystem II","termid":"GO:0009772"}


id: FYPO:0003139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that contains spore-like bodies that do not contain nuclei.","definition_xrefs":["PomBase:mah","PMID:8203159","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000121","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus containing anucleate spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation ascus containing anucleate spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci containing anucleate spores","type":"related"}],"termid":"FYPO:0003139"}


id: GO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of cardiac atrium muscle is generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial cardiac muscle tissue development","termid":"GO:0003228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle tissue morphogenesis","synonyms":[{"name":"atrial heart muscle morphogenesis","type":"exact"},{"name":"atrial myocardium morphogenesis","type":"exact"},{"name":"cardiac atrium muscle morphogenesis","type":"exact"}],"termid":"GO:0055009"}


id: GO:2001244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-111453"],"synonyms":[{"name":"positive regulation of intrinsic apoptosis","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"positive regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001244"}


id: PBO:0088395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth3","termid":"PBO:0088395"}


id: MONDO:0015906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with hypergonadotropic hypogonadism (obsolete MONDO:0015906)","secondary_identifiers":["Orphanet:181441"],"synonyms":[{"name":"rare disorder with primary hypogonadism","type":"exact"}],"termid":"MONDO:0015906","xrefs":{"Monarch":{"xref_id":"0015906"}}}


id: PBO:0074666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 52","termid":"PBO:0074666"}


id: _global:qualifier
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A relation that holds between an attribute or a qualifier and another attribute.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualifier","secondary_identifiers":["RO:0002573"],"termid":"_global:qualifier"}


id: GO:0009417
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A class of proteins that are the subunit components of fimbria.","definition_xrefs":["ISBN:0914826859"],"gene_count":0,"genotype_count":0,"name":"obsolete fimbrin (obsolete GO:0009417)","synonyms":[{"name":"fimbrin","type":"exact"}],"termid":"GO:0009417"}


id: GO:0047632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + H2O = N-carbamoylputrescine + NH3.","definition_xrefs":["MetaCyc:AGMATINE-DEIMINASE-RXN","EC:3.5.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"agmatine deiminase activity","secondary_identifiers":["RHEA:18037"],"synonyms":[{"name":"agmatine amidinohydrolase","type":"broad"},{"name":"agmatine iminohydrolase activity","type":"related"}],"termid":"GO:0047632"}


id: PBO:0086550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL028W is not an essential gene","termid":"PBO:0086550"}


id: MONDO:0859241
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86713],"is_not":false,"summary":null,"term":"MONDO:0859241"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration, childhood-onset, with progressive microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1801540","UMLS:C5676972","OMIM:619847"],"termid":"MONDO:0859241","terms_by_termid":{"MONDO:0859241":null},"xrefs":{"Monarch":{"xref_id":"0859241"}}}


id: PBO:0029578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0029578"}


id: PBO:0076271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYBU antisense RNA 1","termid":"PBO:0076271"}


id: PBO:0064315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 4","termid":"PBO:0064315"}


id: MONDO:0002695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation or presence of a blood clot (thrombus) in the superior sagittal sinus or the inferior sagittal sinus. Sagittal sinus thrombosis can result from infections, hematological disorders, craniocerebral trauma; and neurosurgical procedures. Clinical features are primarily related to the increased intracranial pressure causing headache; nausea; and vomiting. Severe cases can evolve to seizures or coma.","definition_xrefs":["MESH:D020225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial sinus thrombosis","termid":"MONDO:0002692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sagittal sinus thrombosis","secondary_identifiers":["UMLS:C0338575","MEDGEN:90927","DOID:3576","SCTID:192760003"],"synonyms":[{"name":"thrombosis of superior longitudinal sinus","type":"exact"},{"name":"thrombosis of superior sagittal sinus","type":"exact"}],"termid":"MONDO:0002695","xrefs":{"Monarch":{"xref_id":"0002695"}}}


id: GO:0043870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-acetyl-L-aminoadipate-semialdehyde + NADP+ + phosphate = N(2)-acetyl-L-gamma-aminoadipyl phosphate + NADPH.","definition_xrefs":["RHEA:41948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"N-acetyl-gamma-aminoadipyl-phosphate reductase activity","secondary_identifiers":["MetaCyc:RXN-5183"],"synonyms":[{"name":"AGPR","type":"related"},{"name":"ArgC","type":"related"},{"name":"LysY","type":"related"},{"name":"N-acetyl-alpha-glutamyl-phosphate reductase activity","type":"exact"},{"name":"N-acetyl-aminoadipate semialdehyde dehydrogenase activity","type":"exact"},{"name":"NAGSA dehydrogenase activity","type":"broad"}],"termid":"GO:0043870"}


id: GO:0048557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"},{"relation_name":"part_of","term_name":"embryonic digestive tract development","termid":"GO:0048566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic digestive tract morphogenesis","secondary_identifiers":["GO:0048558"],"synonyms":[{"name":"embryonic gut morphogenesis","type":"broad"}],"termid":"GO:0048557"}


id: PR:P87304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl-coenzyme A thioesterase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03842","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase C31F10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.02","secondary_identifiers":["UniProtKB:P87304"],"synonyms":[{"name":"Spom972h-ACOT13","type":"exact"}],"termid":"PR:P87304"}


id: FYPO:0001494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, and contains more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"inviable elongated multiseptate vegetative cell","synonyms":[{"name":"elongated inviable multiseptate cell during vegetative growth","type":"exact"},{"name":"elongated multiseptate inviable vegetative cell","type":"exact"},{"name":"inviable elongated multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0001494"}


id: MONDO:0016397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal disease with epilepsy (obsolete MONDO:0016397)","secondary_identifiers":["Orphanet:225681"],"termid":"MONDO:0016397","xrefs":{"Monarch":{"xref_id":"0016397"}}}


id: GO:0102943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,3S)-2,3-dihydro-3-hydroxyanthranilic acid = (1R,6S)-6-ammonio-5-oxocyclohex-2-ene-1-carboxylate.","definition_xrefs":["RHEA:28182","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"trans-2,3-dihydro-3-hydroxy-anthranilate isomerase activity","secondary_identifiers":["EC:5.3.3.17","MetaCyc:RXN-9031"],"termid":"GO:0102943"}


id: PBO:0070507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 6","termid":"PBO:0070507"}


id: GO:0002127
data:
  {"annotated_genes":["SJAG_02099","SJAG_05249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88008,93685],"is_not":false,"summary":null,"term":"GO:0002127"}]},"cv_name":"biological_process","definition":"The process in which the base of cytosine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the C5 position.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble cytosine modification","termid":"GO:0002101"},{"relation_name":"is_a","term_name":"tRNA C5-cytosine methylation","termid":"GO:0002946"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02099":null,"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA wobble base cytosine methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"wobble position m5C biosynthesis","type":"exact"}],"termid":"GO:0002127","terms_by_termid":{"GO:0002127":null}}


id: GO:0015297
data:
  {"annotated_genes":["SJAG_03951","SJAG_02050","SJAG_04698","SJAG_01183","SJAG_00612","SJAG_00339","SJAG_04028","SJAG_04096","SJAG_00276","SJAG_01145","SJAG_01960","SJAG_04616","SJAG_01541","SJAG_04406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58288,63378,71437,74865,76327,93100],"is_not":false,"summary":null,"term":"GO:0015297"},{"annotations":[58730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[102644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[90958,69883,78178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[90959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[79850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[77855,79849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[57203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"}]},"cv_name":"molecular_function","definition":"Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).","definition_xrefs":["ISBN:0815340729","PMID:10839820","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00612":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01541":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03951":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04406":null,"SJAG_04616":null,"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"antiporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015300","Reactome:R-HSA-2731002","Reactome:R-HSA-2730959","Reactome:R-HSA-2730692","GO:0099516"],"synonyms":[{"name":"antiport","type":"related"},{"name":"countertransporter activity","type":"exact"},{"name":"exchange transporter activity","type":"exact"},{"name":"exchanger","type":"broad"},{"name":"ion antiporter activity","type":"narrow"},{"name":"porter","type":"broad"},{"name":"solute:solute antiporter activity","type":"exact"},{"name":"solute:solute exchange","type":"related"}],"termid":"GO:0015297","terms_by_termid":{"GO:0005452":null,"GO:0005471":null,"GO:0010486":null,"GO:0015297":null,"GO:0015369":null,"GO:0015385":null,"GO:0015386":null,"GO:0140987":null}}


id: GO:0050321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + tau-protein = ADP + O-phospho-tau-protein on serine and threonine residues.","definition_xrefs":["EC:2.7.11.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"tau-protein kinase activity","secondary_identifiers":["MetaCyc:TAU-PROTEIN-KINASE-RXN"],"synonyms":[{"name":"ATP:tau-protein O-phosphotransferase activity","type":"broad"},{"name":"CDK5/p23","type":"related"},{"name":"GSK","type":"related"},{"name":"STK31","type":"related"},{"name":"TPK","type":"related"},{"name":"TPK I","type":"related"},{"name":"TPK II","type":"related"},{"name":"TTK","type":"related"},{"name":"[Tau protein] kinase activity","type":"exact"},{"name":"brain protein kinase PK40erk activity","type":"narrow"},{"name":"cdk5/p20","type":"related"},{"name":"glycogen synthase kinase-3beta activity","type":"related"},{"name":"protein tau kinase activity","type":"related"},{"name":"tau kinase activity","type":"related"},{"name":"tau protein kinase activity","type":"related"},{"name":"tau-protein kinase I activity","type":"narrow"},{"name":"tau-protein kinase II activity","type":"narrow"},{"name":"tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:0050321"}


id: GO:2001083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alpha-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alpha-D-glucan binding","termid":"GO:2001083"}


id: PBO:0054496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1896","termid":"PBO:0054496"}


id: PBO:0045312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase","termid":"PBO:0045312"}


id: GO:2000249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin cytoskeleton reorganization.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin cytoskeleton reorganization (obsolete GO:2000249)","synonyms":[{"name":"regulation of actin cytoskeleton remodeling","type":"exact"},{"name":"regulation of actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:2000249"}


id: GO:0046692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to the success of sperm fertilization in multiply-mated females.","definition_xrefs":["PMID:10885514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm competition","secondary_identifiers":["Wikipedia:Sperm_competition"],"termid":"GO:0046692"}


id: MONDO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete interstitial cystitis (obsolete MONDO:0001839)","termid":"MONDO:0001839","xrefs":{"Monarch":{"xref_id":"0001839"}}}


id: PBO:0088588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mre11 complex BRCT domain subunit Nbs1","termid":"PBO:0088588"}


id: PBO:0110479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic lncRNA metabolic regulator 1","termid":"PBO:0110479"}


id: PATO:0002080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being seperated into two contiguous wholes.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broken into two pieces","termid":"PATO:0002080"}


id: MONDO:0859293
data:
  {"annotated_genes":["SJAG_02285"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85523],"is_not":false,"summary":null,"term":"MONDO:0859293"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, cerebral atrophy, and visual impairment","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620066","MEDGEN:1823998","UMLS:C5774225"],"termid":"MONDO:0859293","terms_by_termid":{"MONDO:0859293":null},"xrefs":{"Monarch":{"xref_id":"0859293"}}}


id: GO:0033937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the beta-ketopyranosidic linkages of 3-deoxy-D-manno-2-octulosonate in capsular polysaccharides.","definition_xrefs":["EC:3.2.1.124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"3-deoxy-2-octulosonidase activity","secondary_identifiers":["MetaCyc:3.2.1.124-RXN"],"synonyms":[{"name":"2-keto-3-deoxyoctonate hydrolase activity","type":"related"},{"name":"capsular-polysaccharide 3-deoxy-D-manno-2-octulosonohydrolase activity","type":"related"},{"name":"octulofuranosylono hydrolase activity","type":"related"},{"name":"octulopyranosylonohydrolase activity","type":"related"},{"name":"octulosylono hydrolase activity","type":"related"}],"termid":"GO:0033937"}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0031122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: PBO:0042815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 4","termid":"PBO:0042815"}


id: PBO:0053251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX4 antisense RNA 1","termid":"PBO:0053251"}


id: GO:0140658
data:
  {"annotated_genes":["SJAG_04114","SJAG_02906","SJAG_02571","SJAG_04755","SJAG_03982","SJAG_04355","SJAG_01653","SJAG_02872","SJAG_03613","SJAG_00500","SJAG_02698","SJAG_01938","SJAG_00925","SJAG_05313","SJAG_01878","SJAG_03036","SJAG_04038","SJAG_04692"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59736,71435,79206,80165,101482,112043,116507,116508],"is_not":false,"summary":null,"term":"GO:0140658"},{"annotations":[87731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[103353,94372,96214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[112889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[71839,73118,79885,113106,69964,72520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"An activity, driven by ATP hydrolysis, that modulates the contacts between histones and DNA, resulting in a change in chromosome architecture within the nucleosomal array, leading to chromatin remodeling.","definition_xrefs":["PMID:34313222","PMID:21862382","PMID:19165147","PMID:30867599","PMID:14729263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_00925":null,"SJAG_01653":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_03036":null,"SJAG_03613":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04114":null,"SJAG_04355":null,"SJAG_04692":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent chromatin remodeler activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070615"],"synonyms":[{"name":"ATP hydrolysis-dependent chromatin remodeler activity","type":"exact"},{"name":"ATP-dependent chromatin remodeller activity","type":"exact"},{"name":"ATP-dependent chromatin remodelling","type":"related"},{"name":"ATPase-dependent chromatin remodeler activity","type":"exact"},{"name":"nucleosome-activated ATPase activity","type":"related"},{"name":"nucleosome-dependent ATPase activity","type":"related"}],"termid":"GO:0140658","terms_by_termid":{"GO:0140658":null,"GO:0140665":null,"GO:0140674":null,"GO:0140750":null,"GO:0140849":null}}


id: GO:1900241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of phenotypic switching","termid":"GO:1900239"},{"relation_name":"positively_regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenotypic switching","synonyms":[{"name":"activation of phenotypic dimorphism","type":"related"},{"name":"activation of phenotypic switching","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic switching","type":"exact"},{"name":"up-regulation of phenotypic dimorphism","type":"related"},{"name":"up-regulation of phenotypic switching","type":"exact"},{"name":"upregulation of phenotypic dimorphism","type":"related"},{"name":"upregulation of phenotypic switching","type":"exact"}],"termid":"GO:1900241"}


id: PBO:0039802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1","termid":"PBO:0039802"}


id: GO:1903653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts cell motility in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25049409","GO_REF:0000063","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell motility","synonyms":[{"name":"modulation by symbiont of host cell locomotion","type":"exact"},{"name":"modulation by symbiont of host cell motility","type":"exact"},{"name":"modulation by symbiont of host cell movement","type":"related"},{"name":"regulation by symbiont of host cell motility","type":"exact"}],"termid":"GO:1903653"}


id: GO:0008782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenine + S-D-ribosyl-L-homocysteine.","definition_xrefs":["EC:3.2.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"adenosylhomocysteine nucleosidase activity","secondary_identifiers":["RHEA:17805","MetaCyc:ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN"],"synonyms":[{"name":"5'-methyladenosine nucleosidase activity","type":"related"},{"name":"AdoHcy/MTA nucleosidase activity","type":"related"},{"name":"S-adenosyl-L-homocysteine homocysteinylribohydrolase activity","type":"related"},{"name":"S-adenosylhomocysteine hydrolase activity","type":"broad"},{"name":"S-adenosylhomocysteine nucleosidase activity","type":"related"},{"name":"S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase activity","type":"related"}],"termid":"GO:0008782"}


id: MONDO:0024247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing eccrine appendage sweat gland neoplasm. Representative examples include hidrocystoma, syringoma, and syringofibroadenoma.","definition_xrefs":["NCIT:C6797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland neoplasm","termid":"MONDO:0002090"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign eccrine neoplasm","secondary_identifiers":["MEDGEN:231934","UMLS:C1332493","SCTID:254715009"],"synonyms":[{"name":"benign eccrine neoplasm","type":"exact"},{"name":"benign eccrine neoplasm of skin","type":"exact"},{"name":"benign eccrine neoplasm of the skin","type":"exact"},{"name":"benign eccrine skin neoplasm","type":"exact"},{"name":"benign eccrine skin tumor","type":"exact"},{"name":"benign eccrine skin tumour","type":"exact"},{"name":"benign eccrine sweat gland neoplasm","type":"exact"},{"name":"benign eccrine tumor","type":"exact"},{"name":"benign eccrine tumor of skin","type":"exact"},{"name":"benign eccrine tumor of the skin","type":"exact"},{"name":"benign eccrine tumour","type":"exact"},{"name":"benign eccrine tumour of skin","type":"exact"},{"name":"benign eccrine tumour of the skin","type":"exact"},{"name":"benign skin tumor with eccrine differentiation","type":"exact"},{"name":"benign skin tumour with eccrine differentiation","type":"exact"},{"name":"eccrine sweat gland neoplasm, benign","type":"exact"}],"termid":"MONDO:0024247","xrefs":{"Monarch":{"xref_id":"0024247"}}}


id: PBO:0004894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved protein (predicted)","termid":"PBO:0004894"}


id: GO:1990213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of salicylic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml","PMID:17722699","PMID:20565685"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of salicylic acid levels in host (obsolete GO:1990213)","termid":"GO:1990213"}


id: MONDO:0100305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of bile acid aminotransferase in which the cause of the disease is a mutation in the BAAT gene.","definition_xrefs":["PMID:16756494","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of bile acid aminotransferase","termid":"MONDO:0100304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"bile acid CoA:amino acid N-acyltransferase deficiency","synonyms":[{"name":"BAAT deficiency","type":"exact"},{"name":"bile acid CoA:amino acid N-acyltransferase deficiency","type":"exact"}],"termid":"MONDO:0100305","xrefs":{"Monarch":{"xref_id":"0100305"}}}


id: MONDO:1011681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent adrenal Cushing syndrome, non-human animal","secondary_identifiers":["OMIA:001937"],"termid":"MONDO:1011681","xrefs":{"Monarch":{"xref_id":"1011681"}}}


id: GO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a specific DNA sequence and recruiting RNA polymerase to the DNA in order to form the preinitiation complex (PIC).","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting (obsolete GO:0001011)","synonyms":[{"name":"sequence-specific DNA binding RNA polymerase recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001011"}


id: GO:1901126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of candicidin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00101","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"candicidin metabolic process","termid":"GO:1901125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin catabolic process","synonyms":[{"name":"candicidin breakdown","type":"exact"},{"name":"candicidin catabolism","type":"exact"},{"name":"candicidin degradation","type":"exact"}],"termid":"GO:1901126"}


id: PBO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1 mediated H3 K4 methylation is preferentially enriched at euchromatic loci","termid":"PBO:0005124"}


id: PBO:0002697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide phospholipase C Plc1","termid":"PBO:0002697"}


id: PBO:0080137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasohibin 1","termid":"PBO:0080137"}


id: PBO:0065282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 2","termid":"PBO:0065282"}


id: PBO:0040206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrotactin 2","termid":"PBO:0040206"}


id: PBO:0044169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytotoxic T-lymphocyte associated protein 4","termid":"PBO:0044169"}


id: GO:1990550
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96329],"is_not":false,"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The process in which alpha-ketoglutarate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11013234","PMID:20371607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transport","termid":"GO:0015742"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990552"],"synonyms":[{"name":"mitochondrial 2-oxoglutarate transmembrane transport","type":"exact"}],"termid":"GO:1990550","terms_by_termid":{"GO:1990550":null}}


id: MONDO:0007386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete human coronavirus sensitivity (obsolete MONDO:0007386)","secondary_identifiers":["OMIM:122460"],"synonyms":[{"name":"Coronavirus 229E susceptibility","type":"related"},{"name":"HCVS","type":"exact"},{"name":"human coronavirus sensitivity","type":"related"}],"termid":"MONDO:0007386","xrefs":{"Monarch":{"xref_id":"0007386"}}}


id: GO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxymethylceph-3-em-4-carboxylate + carbamoyl-phosphate = phosphate + a 3-carbamoyloxymethylcephem.","definition_xrefs":["EC:2.1.3.7","MetaCyc:2.1.3.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"3-hydroxymethylcephem carbamoyltransferase activity","secondary_identifiers":["GO:0045447"],"synonyms":[{"name":"3'-hydroxymethylcephem-O-carbamoyltransferase activity","type":"exact"},{"name":"carbamoyl-phosphate:3-hydroxymethylceph-3-em-4-carboxylate carbamoyltransferase activity","type":"related"}],"termid":"GO:0047155"}


id: PBO:0090812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator, C-terminal","termid":"PBO:0090812"}


id: PBO:0089345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]-synthase condensing enzyme Cem1","termid":"PBO:0089345"}


id: PBO:0030922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase","termid":"PBO:0030922"}


id: MOD:01229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to an L-iodohistidine.","definition_xrefs":["Unimod:129#H","PubMed:2026710","PubMed:15627961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoiodinated residue","termid":"MOD:00500"},{"relation_name":"is_a","term_name":"halogenated histidine","termid":"MOD:01049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-iodohistidine","synonyms":[{"name":"I1His","type":"exact"},{"name":"Iodination","type":"related"},{"name":"Iodo","type":"related"}],"termid":"MOD:01229"}


id: GO:1900239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phenotypic switching","synonyms":[{"name":"regulation of phenotypic dimorphism","type":"related"}],"termid":"GO:1900239"}


id: MONDO:0010824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome with 46,XY disorder of sex development characterized by variable degrees of intellectual disability, short stature, severe genital anomalies resulting in sexual ambiguity (such as pseudovaginal perineoscrotal hypospadias and persistence of Müllerian structures), and ocular anomalies (microphthalmia, coloboma). Craniofacial peculiarities (coarse features, deep set eyes), spina bifida, imperforate anus, and sensorineural hearing loss were also described. No new cases have been reported since 1994.","definition_xrefs":["Orphanet:2983"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of sex development-intellectual disability syndrome","secondary_identifiers":["OMIM:600122","MESH:C535693","MEDGEN:325469","GARD:4550","SCTID:719450007","UMLS:C1838611"],"synonyms":[{"name":"Male pseudohermaphroditism intellectual disability syndrome, Verloes type","type":"related"},{"name":"Verloes Gillerot Fryns syndrome","type":"related"},{"name":"Verloes syndrome","type":"related"},{"name":"Verloes-Gillerot-Fryns syndrome","type":"exact"},{"name":"disorder of sex development intellectual disability","type":"related"},{"name":"male pseudohermaphroditism/intellectual disability syndrome, Verloes type","type":"related"},{"name":"male pseudohermaphroditism/mental retardation syndrome, Verloes type","type":"related"},{"name":"pseudohermaphroditism-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0010824","xrefs":{"Monarch":{"xref_id":"0010824"}}}


id: FYPO:0007825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to amino acid starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:33534698","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to amino acid starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to amino acid starvation","type":"related"},{"name":"decreased protein level during cellular response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to amino acid starvation during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to amino acid starvation","type":"exact"}],"termid":"FYPO:0007825"}


id: GO:0048295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgE isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgE isotypes","termid":"GO:0048293"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgE isotypes","termid":"GO:0048289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgE isotypes","synonyms":[{"name":"activation of isotype switching to IgE isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgE isotypes","type":"exact"},{"name":"positive regulation of class switching to IgE isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgE isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgE isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgE isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgE isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgE isotypes","type":"exact"}],"termid":"GO:0048295"}


id: FYPO:0008202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic sister chromatid separation occurs in meiosis I due to erroneous merotelic kinetochore attachment.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"equational sister chromatid separation at meiosis I","termid":"FYPO:0008202"}


id: FYPO:0006387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle pole body organization is abnormal. Mitotic spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the mitotic spindle pole body (SPB).","definition_xrefs":["GO:1905047","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body organization","synonyms":[{"name":"abnormal mitotic SPB organization","type":"exact"},{"name":"abnormal mitotic spindle pole body organisation","type":"exact"}],"termid":"FYPO:0006387"}


id: PBO:0079842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog A","termid":"PBO:0079842"}


id: GO:0015438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + teichoic acid(in) = ADP + phosphate + teichoic acid(out).","definition_xrefs":["PMID:7565096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type teichoic acid transporter activity","secondary_identifiers":["GO:0015162","EC:7.5.2.4","MetaCyc:3.6.3.40-RXN"],"synonyms":[{"name":"ABC-type teichoic-acid transporter","type":"exact"},{"name":"ATP-dependent teichoic acid transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled teichoic acid transmembrane transporter activity","type":"related"},{"name":"teichoic acid transmembrane transporter activity","type":"broad"},{"name":"teichoic-acid ABC transporter","type":"exact"},{"name":"teichoic-acid-transporting ATPase activity","type":"related"}],"termid":"GO:0015438"}


id: PBO:0003363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator subunit Iki3 (predicted)","termid":"PBO:0003363"}


id: PBO:0003763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs20 (predicted)","termid":"PBO:0003763"}


id: GO:0010437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative cleavage of carotenoids at the (9, 10) and/or (9', 10') double bond.","definition_xrefs":["PMID:16459333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid dioxygenase activity","termid":"GO:0010436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"9,10 (9', 10')-carotenoid-cleaving dioxygenase activity","termid":"GO:0010437"}


id: GO:0043376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of CD8-positive, alpha-beta T cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"regulates","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"regulation of CD8-positive T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive T-cell differentiation","type":"exact"},{"name":"regulation of CD8-positive T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha-beta T cell development","type":"related"}],"termid":"GO:0043376"}


id: MOD:02072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-serine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}


id: GO:0003278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in heart morphogenesis","synonyms":[{"name":"apoptosis involved in heart morphogenesis","type":"narrow"}],"termid":"GO:0003278"}


id: MONDO:0010107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular regression syndrome (obsolete MONDO:0010107)","termid":"MONDO:0010107","xrefs":{"Monarch":{"xref_id":"0010107"}}}


id: MONDO:0060783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of congenital adrenal hyperplasia characterized by very low or absent activity of an enzyme in the steroidogenic pathway typically presenting early in life, and requiring life-long cortisol replacement.","definition_xrefs":["NCIT:C131423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"classic congenital adrenal hyperplasia","secondary_identifiers":["UMLS:C4329672","MEDGEN:1390311"],"synonyms":[{"name":"classic CAH","type":"exact"},{"name":"classic congenital adrenal hyperplasia","type":"exact"}],"termid":"MONDO:0060783","xrefs":{"Monarch":{"xref_id":"0060783"}}}


id: MONDO:0970958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of extramedullary conus region spinal cord lipoma characterized by a location at the posterior surface of the conus and its tip. i.e-\\\"transitional\\\" between posterior and terminal conus region spinal cord lipoma.","definition_xrefs":["Orphanet:645291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramedullary conus spinal cord lipoma","termid":"MONDO:0968987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"transitional extramedullary conus spinal cord lipoma","secondary_identifiers":["UMLS:C5816728","MEDGEN:1853150"],"termid":"MONDO:0970958","xrefs":{"Monarch":{"xref_id":"0970958"}}}


id: MONDO:0004021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the mediastinum. Representative examples include mediastinal (thymic) large B-cell lymphoma and Hodgkin lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"mediastinal malignant lymphoma","secondary_identifiers":["UMLS:C1334665","NCIT:C6633","DOID:6868","MEDGEN:235311"],"synonyms":[{"name":"lymphoma of mediastinum","type":"exact"},{"name":"lymphoma of the mediastinum","type":"exact"},{"name":"mediastinal lymphoma","type":"exact"},{"name":"mediastinal malignant lymphoma","type":"exact"},{"name":"mediastinum lymphoma","type":"exact"},{"name":"primary mediastinal lymphoma","type":"exact"}],"termid":"MONDO:0004021","xrefs":{"Monarch":{"xref_id":"0004021"}}}


id: PBO:0089357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside 2-deoxyribosyltransferase","termid":"PBO:0089357"}


id: MONDO:1011952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarthritis, non-human animal","secondary_identifiers":["OMIA:000805"],"termid":"MONDO:1011952","xrefs":{"Monarch":{"xref_id":"1011952"}}}


id: PBO:0048108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 1","termid":"PBO:0048108"}


id: MONDO:0018177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most malignant astrocytic tumor (WHO grade IV). It is composed of poorly differentiated neoplastic astrocytes and it is characterized by the presence of cellular polymorphism, nuclear atypia, brisk mitotic activity, vascular thrombosis, microvascular proliferation and necrosis. It typically affects adults and is preferentially located in the cerebral hemispheres. It may develop from diffuse astrocytoma WHO grade II or anaplastic astrocytoma (secondary glioblastoma, IDH-mutant), but more frequently, it manifests after a short clinical history de novo, without evidence of a less malignant precursor lesion (primary glioblastoma, IDH- wildtype). (Adapted from WHO)","definition_xrefs":["NCIT:C3058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high grade astrocytic tumor","termid":"MONDO:0016680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glioblastoma","secondary_identifiers":["MESH:D005909","ICDO:9440/3","NORD:1187","EFO:0000519","ONCOTREE:GB","SCTID:393563007","MEDGEN:42228","HP:0012174","MedDRA:10018337","NANDO:2200087","DOID:3068","HP:0100843","ONCOTREE:GBM","Orphanet:360","UMLS:C0017636","GARD:2491","MedDRA:10018336"],"synonyms":[{"name":"GBM","type":"exact"},{"name":"GBM (glioblastoma)","type":"exact"},{"name":"WHO grade IV glioma","type":"exact"},{"name":"giant cell glioblastoma (histologic variant)","type":"related"},{"name":"glioblastoma","type":"exact"},{"name":"glioblastoma (disease)","type":"exact"},{"name":"glioblastoma multiforme","type":"exact"},{"name":"glioblastoma multiforme (disease)","type":"exact"},{"name":"gliosarcoma (histologic variant)","type":"related"},{"name":"grade IV adult astrocytic tumor","type":"narrow"},{"name":"grade IV adult astrocytic tumour","type":"narrow"},{"name":"grade IV astrocytic neoplasm","type":"exact"},{"name":"grade IV astrocytic tumor","type":"exact"},{"name":"grade IV astrocytic tumour","type":"exact"},{"name":"grade IV astrocytoma","type":"exact"},{"name":"primary glioblastoma multiforme","type":"exact"},{"name":"spongioblastoma multiforme","type":"exact"}],"termid":"MONDO:0018177","xrefs":{"Monarch":{"xref_id":"0018177"}}}


id: PBO:0075708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2B","termid":"PBO:0075708"}


id: GO:1903926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bisphenol A stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22957036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bisphenol A","termid":"GO:1903925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bisphenol A","termid":"GO:1903926"}


id: GO:0140965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional secondary piRNA, involving a self-perpetuating piRNA loop, often called the ping-pong cycle, in which piRNAs are amplified by pairing with complementary transcripts (for example the transposable element mRNA target). In Drosophila, the processing involves the piwi proteins aubergine and Argonaute 3 and in mice, the piwi proteins Piwil2 and Piwil4.","definition_xrefs":["PMID:32895365","PMID:29281264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA processing","termid":"GO:0034587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"secondary piRNA processing","synonyms":[{"name":"ping-pong amplification","type":"related"},{"name":"ping-pong derived piRNA","type":"exact"},{"name":"secondary PIWI-associated RNA processing","type":"exact"},{"name":"secondary piRNA biogenesis","type":"exact"}],"termid":"GO:0140965"}


id: PBO:0016089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase Nus1 (predicted)","termid":"PBO:0016089"}


id: PBO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.99.7","termid":"PBO:0001476"}


id: GO:0008331
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99417],"is_not":false,"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a high voltage-gated channel. A high voltage-gated channel is a channel whose open state is dependent on high voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","PMID:16382099","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high voltage-gated calcium channel activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-type calcium channel","type":"related"},{"name":"N-type calcium channel","type":"related"},{"name":"P-type calcium channel","type":"related"},{"name":"Q-type calcium channel","type":"related"},{"name":"high voltage gated calcium channel activity","type":"exact"},{"name":"high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008331","terms_by_termid":{"GO:0008331":null}}


id: FYPO:0001126
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119220,119114,119208],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[119023],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[119424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[119124,119129,119161,119135],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119179,119178,119185],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[119184,119183],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has an abnormal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_00514":null,"SJAG_01794":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":14,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D 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cell","type":"related"}],"termid":"FYPO:0001126","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


