# terms

id: GO:0046818
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A location in the host cell nucleus where viral proteins colocalize late in infection prior to the onset of viral DNA synthesis. More than one site can be present simultaneously.","definition_xrefs":["PMID:10233976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"dense nuclear body","termid":"GO:0046818"}


id: FYPO:0005451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one of two different alleles of a gene is lost less frequently than normal after a double-strand break forms nearby.","definition_xrefs":["PomBase:mah","PMID:17724078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased break-induced loss of heterozygosity","synonyms":[{"name":"decreased break-induced loss of heterozygosity during mitotic cell cycle","type":"related"},{"name":"decreased break-induced loss of heterozygosity during vegetative growth","type":"exact"},{"name":"reduced break-induced loss of heterozygosity","type":"exact"}],"termid":"FYPO:0005451"}


id: PR:000028197
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc8 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8","synonyms":[{"name":"cdc8","type":"exact"}],"termid":"PR:000028197"}


id: PBO:0004739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx4","termid":"PBO:0004739"}


id: MONDO:0017886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MiT family translocation renal cell carcinoma (t-RCC) is a rare subtype of renal cell carcinoma with recurrent genetic abnormalities, harboring rearrangements of the TFE3 (Xp11 t-RCC) or TFEB [t(6;11) t-RCC] genes. The t(6;11) t-RCC has distinctive histologic features of biphasic appearance with larger epitheloid and smaller eosinophilic cells. The symptoms are usually non-specific and include hematuria, flank pain, palpable abdominal mass and/or systemic symptoms of anemia, fatigue and fever.","definition_xrefs":["Orphanet:319308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"MIT family translocation renal cell carcinoma","secondary_identifiers":["SCTID:764694005","UMLS:C4518356","MEDGEN:1376834","DOID:0081413","GARD:17446"],"synonyms":[{"name":"carcinoma associated with MITF/TFE translocation","type":"exact"},{"name":"translocation renal cell carcinoma","type":"exact"}],"termid":"MONDO:0017886","xrefs":{"Monarch":{"xref_id":"0017886"}}}


id: GO:0140416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function regulator that inhibits the activity of a transcription regulator via direct binding and/or post-translational modification.","definition_xrefs":["PMID:10652346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"transcription regulator inhibitor activity","synonyms":[{"name":"DNA-binding transcription factor inhibitor activity","type":"narrow"}],"termid":"GO:0140416"}


id: GO:0033503
data:
  {"annotated_genes":["SJAG_00320","SJAG_03006","SJAG_02319","SJAG_00293"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70882,71052,74404,93147],"is_not":false,"summary":null,"term":"GO:0033503"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex that contains two RING finger proteins, which have ubiquitin ligase activity, in addition to a protein with ubiquitin-conjugating enzyme activity; catalyzes the ubiquitination of histone H2B at lysine 119 (or the equivalent residue). In Schizosaccharomyces the subunits are Rhp6, Shf1, Brl2/Rfp1 and Brl1/Rfp2.","definition_xrefs":["GOC:mah","PMID:17374714","PMID:17363370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"HULC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033503","terms_by_termid":{"GO:0033503":null}}


id: PATO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on the side nearest to the axis of an organ or organism.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/adaxial"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaxial to","termid":"PATO:0002047"}


id: FYPO:0004394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis II, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging meiotic chromosomes","termid":"FYPO:0002091"},{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"lagging chromosomes during meiosis II","synonyms":[{"name":"lagging chromosomes during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004394"}


id: PBO:0040958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 29","termid":"PBO:0040958"}


id: MONDO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory disease affecting the esophageal wall.","definition_xrefs":["NCIT:C9224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagitis","secondary_identifiers":["SCTID:16761005","ICD9:530.10","UMLS:C0014868","HP:0100633","ICD9:530.12","ICD9:530.1","MEDGEN:4549","DOID:11963","MESH:D004941"],"synonyms":[{"name":"acute esophagitis","type":"narrow"},{"name":"esophagitis","type":"exact"},{"name":"esophagitis (disease)","type":"exact"},{"name":"esophagus inflammation","type":"exact"},{"name":"inflammation of esophagus","type":"exact"},{"name":"inflammation of oesophagus","type":"exact"},{"name":"oesophagus inflammation","type":"exact"}],"termid":"MONDO:0001409","xrefs":{"Monarch":{"xref_id":"0001409"}}}


id: PBO:0044772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 54","termid":"PBO:0044772"}


id: PBO:0003909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi 2","termid":"PBO:0003909"}


id: PBO:0063993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 27","termid":"PBO:0063993"}


id: PBO:0001497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR98","termid":"PBO:0001497"}


id: PBO:0050062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLCS intronic transcript 1","termid":"PBO:0050062"}


id: PBO:0027325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027325"}


id: PBO:0109397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 24, pseudogene","termid":"PBO:0109397"}


id: RO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is sequentially aligned with if a significant portion bases of x and y correspond in terms of their base type and their relative ordering","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_sequentially_aligned_with","termid":"RO:0002521"}


id: PBO:0012595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase","termid":"PBO:0012595"}


id: MONDO:0009241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fountain syndrome is an extremely rare multi-systemic genetic disorder characterized by intellectual disability, deafness, skeletal abnormalities and coarse facial features.","definition_xrefs":["Orphanet:3219"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fountain syndrome","secondary_identifiers":["GARD:64","SCTID:720957007","MEDGEN:208650","MESH:C537270","OMIM:229120","UMLS:C0795944"],"synonyms":[{"name":"deafness, skeletal dysplasia, lip granuloma","type":"related"},{"name":"deafness-skeletal dysplasia-coarse face with full lips syndrome","type":"exact"},{"name":"deafness-skeletal dysplasia-lip granuloma syndrome","type":"exact"},{"name":"fountain syndrome","type":"exact"},{"name":"intellectual disability, deafness, skeletal abnormalities, coarse face with full lips","type":"related"},{"name":"intellectual disability, sensorineural deafness, skeletal abnormalities, and coarse face with full lips","type":"related"},{"name":"mental retardation, sensorineural deafness, skeletal abnormalities, and coarse face with full lips","type":"related"}],"termid":"MONDO:0009241","xrefs":{"Monarch":{"xref_id":"0009241"}}}


id: PBO:0078479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 3-1","termid":"PBO:0078479"}


id: PBO:0108982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 6","termid":"PBO:0108982"}


id: PBO:0045500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoglein 3","termid":"PBO:0045500"}


id: GO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"gamma-delta intraepithelial T cell development","type":"related"},{"name":"gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002304"}


id: PBO:0055707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin, mannose binding 2","termid":"PBO:0055707"}


id: GO:0034948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxypseudooxynicotine + H2O = 2,6-dihydroxypyridine + 4-methylaminobutyrate.","definition_xrefs":["UM-BBD_reactionID:r0482"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxypseudooxynicotine hydrolase activity (obsolete GO:0034948)","termid":"GO:0034948"}


id: GO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-hydroxypalmitoyl-[acyl-carrier protein] = 2-hexadecenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["PMID:8088535"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity (obsolete GO:0004317)","synonyms":[{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase (hexadec-2-enoyl-acyl-carrier protein-forming)","type":"exact"},{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase activity","type":"exact"},{"name":"(3R)-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-acyl-carrier-protein dehydratase activity","type":"exact"}],"termid":"GO:0004317"}


id: GO:0090133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a mesendoderm undergo directed movement. The mesendoderm is the epithelial tissue that gives rise to both mesoderm and endoderm.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium migration","termid":"GO:0090132"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"},{"relation_name":"part_of","term_name":"mesendoderm development","termid":"GO:0048382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesendoderm migration","termid":"GO:0090133"}


id: PBO:0068541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 146, pseudogene","termid":"PBO:0068541"}


id: PBO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.17","termid":"PBO:0002621"}


id: GO:0097682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of cations by a channel that opens when phosphatidylinositol-3,5-bisphosphate has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:ha","PMID:24375408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity","synonyms":[{"name":"intracellular phosphatidylinositol-3,5-bisphosphate-sensitive cation channel activity","type":"broad"},{"name":"intracellular phosphatidylinositol-3,5-bisphosphate-sensitive monatomic cation channel activity","type":"exact"}],"termid":"GO:0097682"}


id: MONDO:0010316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 3","secondary_identifiers":["UMLS:C1845567","MEDGEN:375687","OMIM:300406"],"synonyms":[{"name":"FG syndrome 3","type":"exact"},{"name":"FGS3","type":"related"}],"termid":"MONDO:0010316","xrefs":{"Monarch":{"xref_id":"0010316"}}}


id: MONDO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of tick-borne disease which presents on the skin caused by bacteria of the genus Rickettsia.","definition_xrefs":["Wikipedia:Spotted_fever"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsiaceae infectious disease","termid":"MONDO:0006927"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted fever","secondary_identifiers":["SCTID:186771002","ICD10CM:A77","GARD:19828","MEDGEN:1826170","ICD9:082.0","DOID:11104","UMLS:C5680374","Orphanet:102022","icd11.foundation:9953620","EFO:1002047","ICD9:083.8"],"synonyms":[{"name":"fever, spotted","type":"related"},{"name":"fevers, spotted","type":"related"},{"name":"spotted fever","type":"exact"},{"name":"spotted fever Group Rickettsioses","type":"related"},{"name":"spotted fever Group rickettsiosis","type":"related"},{"name":"spotted fever group rickettsial disease","type":"exact"},{"name":"spotted fever rickettsiae disease","type":"exact"},{"name":"spotted fever rickettsiosis","type":"exact"},{"name":"spotted fevers","type":"related"}],"termid":"MONDO:0001195","xrefs":{"Monarch":{"xref_id":"0001195"}}}


id: GO:0032683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"negatively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045421"],"synonyms":[{"name":"down regulation of connective tissue growth factor production","type":"exact"},{"name":"down-regulation of connective tissue growth factor production","type":"exact"},{"name":"downregulation of connective tissue growth factor production","type":"exact"},{"name":"inhibition of connective tissue growth factor production","type":"narrow"},{"name":"negative regulation of CCN2 production","type":"exact"},{"name":"negative regulation of CTGF production","type":"exact"},{"name":"negative regulation of Fisp12 production","type":"exact"},{"name":"negative regulation of Hcs24 production","type":"exact"},{"name":"negative regulation of IGFBP8 production","type":"exact"},{"name":"negative regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"negative regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032683"}


id: FYPO:0005985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to acetic acid. Cells stop growing (and may die) at a concentration of acetic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to acetic acid","synonyms":[{"name":"hypersensitive to acetic acid","type":"exact"},{"name":"sensitive to acetic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to acetic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0005985"}


id: PBO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chs five related protein Cfr1","termid":"PBO:0001977"}


id: PBO:0073416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 22","termid":"PBO:0073416"}


id: SO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 2nd residue (an arginine), from the start of the H3 protein is mono-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3R2_monomethylation_site","synonyms":[{"name":" H3R2me1","type":"exact"},{"name":"H3R2 monomethylation site","type":"exact"}],"termid":"SO:0001947"}


id: GO:0050501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)](n) + 2n UDP.","definition_xrefs":["EC:2.4.1.212","MetaCyc:2.4.1.212-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"hyaluronan synthase activity","secondary_identifiers":["Reactome:R-HSA-2160851","RHEA:12528"],"synonyms":[{"name":"HAS activity","type":"broad"},{"name":"alternating UDP-alpha-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1,3)-[nascent hyaluronan] 4-N-acetyl-beta-D-glucosaminyltransferase and UDP-alpha-D-glucuronate:N-acetyl-beta-D-glucosaminyl-(1,4)-[nascent hyaluronan] 3-beta-D-glucuronosyltransferase activity","type":"related"},{"name":"alternating UDP-alpha-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1->3)-[nascent hyaluronan] 4-N-acetyl-beta-D-glucosaminyltransferase and UDP-alpha-D-glucuronate:N-acetyl-beta-D-glucosaminyl-(1->4)-[nascent hyaluronan] 3-beta-D-glucuronosyltransferase activity","type":"related"},{"name":"seHAS","type":"related"},{"name":"spHAS","type":"related"}],"termid":"GO:0050501"}


id: PBO:0038429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,4-galactosyltransferase (P blood group)","termid":"PBO:0038429"}


id: SO:1000017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G, or vice versa.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transversion","secondary_identifiers":["http://en.wikipedia.org/wiki/Transversion"],"termid":"SO:1000017"}


id: GO:0021520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron cell fate specification","termid":"GO:0021520"}


id: GO:0008775
data:
  {"annotated_genes":["SJAG_02769","SJAG_02985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75049,76537],"is_not":false,"summary":null,"term":"GO:0008775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + acetate = a fatty acid anion + acetyl-CoA.","definition_xrefs":["EC:2.8.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"acetate CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACECOATRANS-RXN","Reactome:R-HSA-2066788","RHEA:13381","UM-BBD_enzymeID:r0012"],"synonyms":[{"name":"acetate coenzyme A-transferase activity","type":"related"},{"name":"acetyl-CoA:acetoacetate CoA transferase activity","type":"related"},{"name":"acyl-CoA:acetate CoA-transferase activity","type":"related"},{"name":"butyryl CoA:acetate CoA transferase activity","type":"related"},{"name":"butyryl coenzyme A transferase activity","type":"related"},{"name":"succinyl-CoA:acetate CoA transferase activity","type":"related"}],"termid":"GO:0008775","terms_by_termid":{"GO:0008775":null}}


id: PBO:0046390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1A binding protein p400","termid":"PBO:0046390"}


id: MONDO:0019241
data:
  {"annotated_genes":["SJAG_03316","SJAG_01995","SJAG_01351","SJAG_00988","SJAG_01612","SJAG_01162","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009825"},{"annotations":[85983,85982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009285"},{"annotations":[85663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[85537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[85967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[86615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[84907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01162":null,"SJAG_01216":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_03316":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of the gamma-glutamyl cycle","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268517","icd11.foundation:34853044","GARD:18970","MEDGEN:541345","SCTID:9128006","Orphanet:79196"],"synonyms":[{"name":"disorder of gamma-glutamyl cycle","type":"related"},{"name":"disorder of the gamma-glutamyl cycle","type":"related"}],"termid":"MONDO:0019241","terms_by_termid":{"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009285":null,"MONDO:0009593":null,"MONDO:0009825":null,"MONDO:0009947":null,"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0019241"}}}


id: MONDO:0015999
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014359"}]},"cv_name":"mondo","definition":"A form of bilateral adrenocortical hyperplasia that is often associated with adrenocorticotrophin hormone (ACTH) independent Cushing syndrome and is characterized by small to normal sized adrenal glands containing multiple small cortical pigmented nodules (less than 1 cm in diameter).","definition_xrefs":["Orphanet:189439"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ACTH-independent Cushing syndrome","termid":"MONDO:0020529"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"is_obsolete":false,"name":"primary pigmented nodular adrenocortical disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060280","OMIMPS:610489","SCTID:719274008","NCIT:C131196","UMLS:C4304832","icd11.foundation:2003695246","GARD:10906","MEDGEN:930501"],"synonyms":[{"name":"PPNAD","type":"exact"},{"name":"pigmented nodular adrenocortical disease","type":"exact"},{"name":"pigmented nodular adrenocortical disease, primary","type":"exact"},{"name":"primary pigmented nodular adrenal dysplasia","type":"exact"}],"termid":"MONDO:0015999","terms_by_termid":{"MONDO:0014359":null},"xrefs":{"Monarch":{"xref_id":"0015999"}}}


id: GO:0140609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions or pathway resulting in the formation of phycocyanobilin, which involves the oxidative cleavage of heme by a heme oxygenase (HO) to form biliverdin IX alpha. Biliverdin IX alpha is subsequently converted to phycocyanobilin by a ferredoxin-dependent oxidoreductase (PCYA).","definition_xrefs":["PMID:23345435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"phycocyanobilin biosynthetic process","synonyms":[{"name":"phycocyanobilin biosynthesis","type":"exact"}],"termid":"GO:0140609"}


id: MONDO:0006398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multinodular intermediate fibroblastic neoplasm arising from the retroperitoneum. It is characterized by the presence of spindle-shaped fibroblasts and myofibroblasts, and a chronic inflammatory infiltrate composed of eosinophils, lymphocytes and plasma cells.","definition_xrefs":["NCIT:C39741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"},{"relation_name":"is_a","term_name":"retroperitoneal neoplasm","termid":"MONDO:0024645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retroperitoneal inflammatory myofibroblastic tumor","secondary_identifiers":["UMLS:C1514921","EFO:1000510","MEDGEN:271681"],"synonyms":[{"name":"retroperitoneal inflammatory myofibroblastic tumor","type":"exact"},{"name":"retroperitoneal space inflammatory myofibroblastic tumor","type":"exact"},{"name":"retroperitoneal space inflammatory myofibroblastic tumour","type":"exact"}],"termid":"MONDO:0006398","xrefs":{"Monarch":{"xref_id":"0006398"}}}


id: GO:0009907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light photoperiod stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm.","definition_xrefs":["GOC:go_curators","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"},{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to photoperiod, red light","termid":"GO:0009907"}


id: GO:0099607
data:
  {"annotated_genes":["SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108055],"is_not":false,"summary":null,"term":"GO:0099607"}]},"cv_name":"biological_process","definition":"The cellular process in which sister chromatids become laterally attached to spindle microtubules as part of mitotic metaphase plate congression. Attachment precedes migration along microtubules towards the spindle equator (metaphase plate).","definition_xrefs":["PMID:26705896","PMID:26258632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0051315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"lateral attachment of mitotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099607","terms_by_termid":{"GO:0099607":null}}


id: GO:0102847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:3-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:3-2-16:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102847)","termid":"GO:0102847"}


id: GO:0030429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-kynurenine + H2O = anthranilate + L-alanine + H+. Also acts on 3'-hydroxykynurenine and some other (3-arylcarbonyl)- alanines.","definition_xrefs":["PMID:17300176","EC:3.7.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"kynureninase activity","secondary_identifiers":["MetaCyc:KYNURENINASE-RXN","Reactome:R-HSA-71217"],"synonyms":[{"name":"L-kynurenine hydrolase activity","type":"related"},{"name":"kynurenine hydrolase activity","type":"related"}],"termid":"GO:0030429"}


id: MONDO:1012896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hearing loss that occurs in pigs due to a mutation in the GJB2 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder, non-human animal","termid":"MONDO:1012969"},{"relation_name":"is_a","term_name":"inherited auditory system disease, non-human animal","termid":"MONDO:1012970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, GJB2-related, pig","secondary_identifiers":["OMIA:002439-9823"],"termid":"MONDO:1012896","xrefs":{"Monarch":{"xref_id":"1012896"}}}


id: PBO:0078047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 37","termid":"PBO:0078047"}


id: MONDO:0023091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esophageal atresia coloboma talipes","termid":"MONDO:0023091","xrefs":{"Monarch":{"xref_id":"0023091"}}}


id: GO:0016019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a peptidoglycan and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:14698226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"peptidoglycan immune receptor activity","synonyms":[{"name":"peptidoglycan receptor activity","type":"broad"},{"name":"peptidoglycan recognition activity","type":"narrow"}],"termid":"GO:0016019"}


id: FYPO:0006223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of ferrous iron ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal ferrous iron import","synonyms":[{"name":"abnormal cellular ferrous iron import","type":"exact"},{"name":"abnormal ferrous ion import","type":"exact"},{"name":"abnormal ferrous ion import across plasma membrane","type":"exact"},{"name":"abnormal ferrous iron import during mitotic cell cycle","type":"related"},{"name":"abnormal ferrous iron import during vegetative growth","type":"exact"},{"name":"abnormal ferrous iron import into cell","type":"exact"},{"name":"abnormal ferrous iron ion import","type":"exact"}],"termid":"FYPO:0006223"}


id: MONDO:0017463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudoarthrosis of the limbs","termid":"MONDO:0015525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the femur","secondary_identifiers":["GARD:21204","MEDGEN:1843312","Orphanet:295020","UMLS:C5679939"],"synonyms":[{"name":"congenital pseudarthrosis of the femur","type":"exact"}],"termid":"MONDO:0017463","xrefs":{"Monarch":{"xref_id":"0017463"}}}


id: GO:0090595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + L-lysine = CoA + H+ + N(6)-acetyl-L-lysine.","definition_xrefs":["RHEA:69476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-lysine N6-acetyltransferase","secondary_identifiers":["MetaCyc:LYSACET-RXN","EC:2.3.1.306"],"synonyms":[{"name":"acetyl-CoA:L-lysine N6-acetyltransferase","type":"exact"}],"termid":"GO:0090595"}


id: PR:Q10290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mal2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein mal2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.14","synonyms":[{"name":"Spom972h-mal2","type":"exact"},{"name":"sim4 complex subunit mal2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10290"}


id: PBO:0044998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH3 antisense RNA 1","termid":"PBO:0044998"}


id: GO:0008970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 2-acyl-sn-glycero-3-phosphocholine + a fatty acid + H+.","definition_xrefs":["RHEA:18689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phospholipase A1 activity","secondary_identifiers":["Reactome:R-HSA-1482827","Reactome:R-HSA-5694485","Reactome:R-HSA-1482828","Reactome:R-HSA-1482862","Reactome:R-HSA-1482892","Reactome:R-HSA-1482920","EC:3.1.1.32","MetaCyc:PHOSPHOLIPASE-A1-RXN","Reactome:R-HSA-1482932","Reactome:R-HSA-1482847"],"synonyms":[{"name":"phosphatidylcholine 1-acylhydrolase activity","type":"exact"},{"name":"phosphatidylserine 1-acylhydrolase activity","type":"narrow"}],"termid":"GO:0008970"}


id: PBO:0067399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 505, pseudogene","termid":"PBO:0067399"}


id: MONDO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic facial cleft (obsolete MONDO:0033056)","secondary_identifiers":["Orphanet:414726"],"termid":"MONDO:0033056","xrefs":{"Monarch":{"xref_id":"0033056"}}}


id: PBO:0084566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane peroxin of the peroxisomal importomer complex; complex facilitates the import of peroxisomal matrix proteins; required for peroxisome biogenesis","termid":"PBO:0084566"}


id: GO:2000868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrone secretion","termid":"GO:2000867"},{"relation_name":"negatively_regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrone secretion","synonyms":[{"name":"negative regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"negative regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000868"}


id: MONDO:0007801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypoplasia of teeth roots (obsolete MONDO:0007801)","secondary_identifiers":["MESH:C564144","OMIM:146400"],"synonyms":[{"name":"hypoplasia of teeth roots","type":"related"}],"termid":"MONDO:0007801","xrefs":{"Monarch":{"xref_id":"0007801"}}}


id: FYPO:0003412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"},{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere","termid":"FYPO:0002834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere outer repeat","synonyms":[{"name":"decreased chromatin silencing at centromere otr","type":"exact"},{"name":"decreased chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"decreased chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"decreased chromatin silencing at pericentric region","type":"related"},{"name":"decreased chromatin silencing at pericentromeric region","type":"related"},{"name":"decreased heterochromatin silencing at centromere outer repeat region","type":"exact"},{"name":"reduced chromatin silencing at centromere outer repeat","type":"exact"}],"termid":"FYPO:0003412"}


id: PBO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer","termid":"PBO:0000239"}


id: GO:0140834
data:
  {"annotated_genes":["SJAG_00342","SJAG_03967","SJAG_00150","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94101,95570,105851,108842],"is_not":false,"summary":null,"term":"GO:0140834"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphoserine (position 2).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_03061":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0016301","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S2 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain S2 kinase activity","type":"exact"}],"termid":"GO:0140834","terms_by_termid":{"GO:0140834":null}}


id: PBO:0067697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 5","termid":"PBO:0067697"}


id: MONDO:0005930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postpoliomyelitis syndrome (obsolete MONDO:0005930)","termid":"MONDO:0005930","xrefs":{"Monarch":{"xref_id":"0005930"}}}


id: FYPO:0007762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphatidate cytidylyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal phosphatidate cytidylyltransferase activity","synonyms":[{"name":"abnormal CDP-diacylglycerol synthase activity","type":"exact"}],"termid":"FYPO:0007762"}


id: GO:0097429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ligation of an amino acid to another amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate, carried out by a nonribosomal peptide synthase.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"non-ribosomal peptide synthetase activity","termid":"GO:1904091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"amino acid ligation activity by nonribosomal peptide synthase","termid":"GO:0097429"}


id: GO:1905892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["GOC:aruk","PMID:21803450","GO_REF:0000058","GOC:bc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to thapsigargin (obsolete GO:1905892)","synonyms":[{"name":"down regulation of cellular response to thapsigargin","type":"exact"},{"name":"down-regulation of cellular response to thapsigargin","type":"exact"},{"name":"downregulation of cellular response to thapsigargin","type":"exact"},{"name":"inhibition of cellular response to thapsigargin","type":"narrow"}],"termid":"GO:1905892"}


id: GO:0033892
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage near pyrimidine dimers to products with 5'-phosphate.","definition_xrefs":["EC:3.1.25.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific endodeoxyribonuclease activity, specific for altered base","termid":"GO:0016890"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788","GO:0140097"],"is_obsolete":false,"name":"deoxyribonuclease (pyrimidine dimer) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.25.1-RXN"],"synonyms":[{"name":"T4 endonuclease V activity","type":"related"},{"name":"bacteriophage T4 endodeoxyribonuclease V activity","type":"related"},{"name":"endodeoxyribonuclease (pyrimidine dimer) activity","type":"related"}],"termid":"GO:0033892","terms_by_termid":{"GO:1990043":null}}


id: GO:0009899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-kaur-16-ene + diphosphate.","definition_xrefs":["EC:4.2.3.19","RHEA:22220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ent-kaurene synthase activity","secondary_identifiers":["MetaCyc:4.2.3.19-RXN","KEGG_REACTION:R05092"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"},{"name":"ent-copalyl-diphosphate diphosphate-lyase (cyclizing, ent-kaurene-forming)","type":"related"},{"name":"ent-kaurene synthase B activity","type":"narrow"},{"name":"ent-kaurene synthetase B activity","type":"narrow"}],"termid":"GO:0009899"}


id: GO:0090251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained in, a specific location in a cell that contributes to the establishment of planar polarity.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization involved in establishment of planar polarity","synonyms":[{"name":"protein localisation involved in establishment of planar polarity","type":"exact"}],"termid":"GO:0090251"}


id: MONDO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An pneumonia caused by infection with Klebsiella.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"Klebsiella infectious disease","termid":"MONDO:0030603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Klebsiella pneumonia","secondary_identifiers":["ICD10CM:J15.0","MEDGEN:636012","SCTID:64479007","MESH:D007710","ICD9:482.0","UMLS:C0519030","DOID:13272"],"synonyms":[{"name":"Klebsiella caused pneumonia","type":"exact"},{"name":"pneumonia caused by Klebsiella pneumoniae","type":"related"},{"name":"pneumonia due to Klebsiella pneumoniae","type":"exact"},{"name":"pneumonia due to Klebsiella pneumoniae (disorder)","type":"exact"}],"termid":"MONDO:0030602","xrefs":{"Monarch":{"xref_id":"0030602"}}}


id: MONDO:0016495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete functional variant of Guillain-Barre syndrome (obsolete MONDO:0016495)","secondary_identifiers":["Orphanet:231419"],"synonyms":[{"name":"functional variant of GBS","type":"exact"},{"name":"functional variant of Guillain-Barré syndrome","type":"related"}],"termid":"MONDO:0016495","xrefs":{"Monarch":{"xref_id":"0016495"}}}


id: GO:0102307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: erythromycin C + S-adenosyl-L-methionine = erythromycin A + H+ + S-adenosyl-L-homocysteine. Also converts erythromycin D into erythromycin B.","definition_xrefs":["EC:2.1.1.254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"erythromycin 3''-o-methyltransferase activity","synonyms":[{"name":"erythromycin C 3''-o-methyltransferase activity","type":"narrow"},{"name":"erythromycin D 3''-o-methyltransferase activity","type":"narrow"}],"termid":"GO:0102307"}


id: FYPO:0002227
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119013],"is_not":false,"summary":null,"term":"FYPO:0002227"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular triglyceride level during vegetative growth","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cellular TAG level during vegetative growth","type":"exact"},{"name":"increased cellular triacylglycerol level during vegetative growth","type":"exact"},{"name":"increased cellular triglyceride level during mitotic cell cycle","type":"related"},{"name":"increased triglyceride accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002227","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0002227":null}}


id: GO:0007192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by serotonin binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph","GOC:mah","GOC:signaling","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating serotonin receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by serotonin receptor signalling pathway","type":"related"},{"name":"serotonin receptor, adenylate cyclase activating pathway","type":"related"},{"name":"serotonin receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0007192"}


id: PBO:0063854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 inducible cancer associated RNA transcript 1","termid":"PBO:0063854"}


id: MONDO:0018456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarticular juvenile idiopathic arthritis","secondary_identifiers":["MEDGEN:1622195","GARD:21729","EFO:0009730","Orphanet:404580","SCTID:16044751000119106","UMLS:C4521004"],"synonyms":[{"name":"juvenile polyarthritis","type":"exact"},{"name":"juvenile polyarticular arthritis","type":"exact"},{"name":"polyarticular JIA","type":"exact"}],"termid":"MONDO:0018456","xrefs":{"Monarch":{"xref_id":"0018456"}}}


id: GO:0050480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-(4-oxo-4,5-dihydro-1H-imidazol-5-yl)propanoic acid + H2O = N-formimidoyl-L-glutamate + H+.","definition_xrefs":["EC:3.5.2.7","RHEA:23660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"imidazolonepropionase activity","secondary_identifiers":["MetaCyc:IMIDAZOLONEPROPIONASE-RXN","KEGG_REACTION:R02288"],"synonyms":[{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate amidohydrolase activity","type":"related"},{"name":"4(5)-imidazolone-5(4)-propionic acid hydrolase activity","type":"related"},{"name":"imidazolone propionic acid hydrolase activity","type":"related"},{"name":"imidazolone-5-propionate hydrolase activity","type":"related"}],"termid":"GO:0050480"}


id: PBO:0027212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_amino_acid_biosynthesis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027212"}


id: GO:0030604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + NADP+ = 1-deoxy-D-xylulose 5-phosphate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.267","RHEA:13717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-deoxy-D-xylulose-5-phosphate reductoisomerase activity","secondary_identifiers":["MetaCyc:DXPREDISOM-RXN","KEGG_REACTION:R05688"],"synonyms":[{"name":"1-deoxy-D-xylulose-5-phosphate isomeroreductase activity","type":"related"},{"name":"1-deoxyxylulose-5-phosphate reductoisomerase activity","type":"related"},{"name":"2-C-methyl-D-erythritol-4-phosphate:NADP+ oxidoreductase (isomerizing)","type":"related"},{"name":"2C-methyl-D-erythritol-4-phosphate (MEP) synthase activity","type":"related"},{"name":"DOXP reductoisomerase activity","type":"exact"},{"name":"DXP-reductoisomerase activity","type":"related"}],"termid":"GO:0030604"}


id: GO:0003842
data:
  {"annotated_genes":["SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77757],"is_not":false,"summary":null,"term":"GO:0003842"}]},"cv_name":"molecular_function","definition":"H2O + L-glutamate 5-semialdehyde + NAD+ = 2 H+ + L-glutamate + NADH.","definition_xrefs":["RHEA:30235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1-pyrroline-5-carboxylate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70679","Reactome:R-HSA-6784399","EC:1.2.1.88","MetaCyc:RXN-14116"],"synonyms":[{"name":"1-pyrroline dehydrogenase","type":"broad"},{"name":"1-pyrroline-5-carboxylate:NAD+ oxidoreductase activity","type":"related"},{"name":"L-pyrroline-5-carboxylate-NAD+ oxidoreductase activity","type":"related"},{"name":"delta1-pyrroline-5-carboxylate dehydrogenase activity","type":"related"},{"name":"pyrroline-5-carboxylate dehydrogenase activity","type":"related"},{"name":"pyrroline-5-carboxylic acid dehydrogenase activity","type":"related"}],"termid":"GO:0003842","terms_by_termid":{"GO:0003842":null}}


id: PBO:0087756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface","termid":"PBO:0087756"}


id: PR:Q09810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylyltransferase and sulfurtransferase MOCS3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyltransferase and sulfurtransferase uba4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.10c","secondary_identifiers":["UniProtKB:Q09810"],"synonyms":[{"name":"Spom972h-MOCS3","type":"exact"},{"name":"ubiquitin-like protein activator 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09810"}


id: PBO:0046735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 1","termid":"PBO:0046735"}


id: GO:0070697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an activin receptor.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase binding","termid":"GO:0070696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"activin receptor binding","termid":"GO:0070697"}


id: GO:0015229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-ascorbate from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-198870"],"synonyms":[{"name":"L-ascorbate transporter activity","type":"exact"},{"name":"vitamin C transporter activity","type":"exact"}],"termid":"GO:0015229"}


id: MONDO:0005265
data:
  {"annotated_genes":["SJAG_03363","SJAG_03136"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012610"},{"annotations":[87116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012831"}]},"cv_name":"mondo","definition":"A spectrum of small and large bowel inflammatory diseases of unknown etiology. It includes Crohn's disease, ulcerative colitis, and colitis of indeterminate type.","definition_xrefs":["NCIT:C3138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03136":null,"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:266600","ICD9:558.9","MESH:D015212","SCTID:24526004","NANDO:2100259","UMLS:C0021390","DOID:0050589","EFO:0003767","MEDGEN:43877"],"synonyms":[{"name":"IBD","type":"exact"},{"name":"autoimmune bowel disorder","type":"exact"},{"name":"inflammatory bowel disease","type":"exact"}],"termid":"MONDO:0005265","terms_by_termid":{"MONDO:0012610":null,"MONDO:0012831":null},"xrefs":{"Monarch":{"xref_id":"0005265"}}}


id: PBO:0061760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase 3","termid":"PBO:0061760"}


id: GO:0045475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythm of the locomotor activity of an organism during its 24 hour activity cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotor rhythm","synonyms":[{"name":"circadian locomotor activity rhythm","type":"narrow"}],"termid":"GO:0045475"}


id: PBO:0078659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 12-1","termid":"PBO:0078659"}


id: PBO:0058172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4467","termid":"PBO:0058172"}


id: FYPO:0000805
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119011],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[119290,119291,119293,119302,119305],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endoplasmic reticulum (ER) organization is abnormal. ER organization results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum.","definition_xrefs":["PomBase:mah","GO:0007029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum organization","references_by_uniquename":{"PMID:25318672":null,"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_01906","SJAG_02763","SJAG_03940","SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta"],"synonyms":[{"name":"abnormal ER organization","type":"exact"},{"name":"abnormal endoplasmic reticulum organisation","type":"exact"},{"name":"abnormal endoplasmic reticulum organization during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000805","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001784":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: PBO:0080689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 1","termid":"PBO:0080689"}


id: GO:0140937
data:
  {"annotated_genes":["SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109275],"is_not":false,"summary":null,"term":"GO:0140937"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 12) + H2O = histone H4 L-lysine (position 12) + acetate. This reaction represents the removal of an acetyl group from lysine at position 12 of the histone H4 protein.","definition_xrefs":["PMID:15293224","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K deacetylase activity","termid":"GO:0141051"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0140096","GO:0003674","GO:0019213","GO:0033558","GO:0016787"],"is_obsolete":false,"name":"histone H4K12 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4-K12 deacetylase activity","type":"exact"},{"name":"histone H4-K12 deacetylation","type":"related"},{"name":"histone H4K12 deacetylase activity","type":"broad"},{"name":"histone H4K12 deacetylation","type":"related"},{"name":"histone deacetylase activity (H4-K12 specific)","type":"exact"}],"termid":"GO:0140937","terms_by_termid":{"GO:0140937":null}}


id: PBO:0045955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFLAM antisense RNA 2","termid":"PBO:0045955"}


id: MONDO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kenny-Caffey syndrome (obsolete MONDO:0000135)","termid":"MONDO:0000135","xrefs":{"Monarch":{"xref_id":"0000135"}}}


id: PBO:0031596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_telophase","termid":"PBO:0031596"}


id: PBO:0017015
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Orc4 binding footprint at replication origins is extended in G1 in the presence of Cdc1 and the MCM complex","termid":"PBO:0017015"}


id: PBO:0051809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain 3 pseudogene 3","termid":"PBO:0051809"}


id: MONDO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade well differentiated tumor with neuroendocrine differentiation that arises from the pancreas. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal or less than 2%.","definition_xrefs":["NCIT:C95584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:459467","SCTID:254613007","UMLS:C2987241"],"synonyms":[{"name":"grade 1 neuroendocrine neoplasm of pancreas","type":"exact"},{"name":"pancreas NET G1","type":"exact"},{"name":"pancreas carcinoid tumor","type":"exact"},{"name":"pancreas carcinoid tumour","type":"exact"},{"name":"pancreas neuroendocrine neoplasm G1","type":"exact"},{"name":"pancreas neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"pancreatic NET G1","type":"exact"},{"name":"pancreatic neuroendocrine tumor G1","type":"exact"}],"termid":"MONDO:0021535","xrefs":{"Monarch":{"xref_id":"0021535"}}}


id: PBO:0086558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YLR365W is not an essential gene","termid":"PBO:0086558"}


id: MOD:01544
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01544"}


id: PBO:0038798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3B (pseudogene)","termid":"PBO:0038798"}


id: GO:0008193
data:
  {"annotated_genes":["SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73083],"is_not":false,"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of a tRNA molecule; observed for His tRNAs.","definition_xrefs":["PMID:1660461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA guanylyltransferase activity","termid":"GO:0008192"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"tRNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:54564","EC:2.7.7.79"],"termid":"GO:0008193","terms_by_termid":{"GO:0008193":null}}


id: GO:0042463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of photoreceptors, sensory cells that react to the presence of light, found in the ocellus.","definition_xrefs":["PMID:11542766","GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell development","termid":"GO:0042461"},{"relation_name":"part_of","term_name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell development","secondary_identifiers":["GO:0001749"],"synonyms":[{"name":"non-eye photoreceptor development","type":"broad"}],"termid":"GO:0042463"}


id: GO:0033480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-galacturonate, a substance composed of galacturonic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-galacturonate metabolic process","termid":"GO:0033479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP-D-galacturonate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-4"],"synonyms":[{"name":"UDP-D-galacturonate anabolism","type":"exact"},{"name":"UDP-D-galacturonate biosynthesis","type":"exact"},{"name":"UDP-D-galacturonate formation","type":"exact"},{"name":"UDP-D-galacturonate synthesis","type":"exact"}],"termid":"GO:0033480"}


id: SO:0000511
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_C_cluster","synonyms":[{"name":"J C cluster","type":"exact"},{"name":"J-C-CLUSTER","type":"exact"}],"termid":"SO:0000511"}


id: PBO:0042610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 10","termid":"PBO:0042610"}


id: PBO:0070336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 8","termid":"PBO:0070336"}


id: PBO:0066389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ like helicase 5","termid":"PBO:0066389"}


id: GO:0050126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoylputrescine + H2O + 2 H+ = CO2 + NH4 + putrescine.","definition_xrefs":["EC:3.5.1.53","RHEA:22284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N-carbamoylputrescine amidase activity","secondary_identifiers":["KEGG_REACTION:R01152","MetaCyc:N-CARBAMOYLPUTRESCINE-AMIDASE-RXN"],"synonyms":[{"name":"N-carbamoylputrescine amidohydrolase activity","type":"related"},{"name":"NCP","type":"related"},{"name":"carbamoylputrescine hydrolase activity","type":"related"}],"termid":"GO:0050126"}


id: PBO:0084611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YKR099C-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YKR100C","termid":"PBO:0084611"}


id: MONDO:1010039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megacolon that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megacolon, non-human animal","secondary_identifiers":["OMIA:000629"],"termid":"MONDO:1010039","xrefs":{"Monarch":{"xref_id":"1010039"}}}


id: PBO:0017879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Gtp1, implicated in cytoplasmic translation (predicted)","termid":"PBO:0017879"}


id: GO:0070769
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to CIB, a protein that binds calcium as well as the alphaIIb-beta3 integrin.","definition_xrefs":["PMID:9030514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CIB complex","synonyms":[{"name":"ITGA2B-ITGB3-CIB1 complex","type":"narrow"}],"termid":"GO:0070769"}


id: PBO:0067119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 164, pseudogene","termid":"PBO:0067119"}


id: MONDO:0005987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the genus toxascaris.","definition_xrefs":["MESH:D017227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxascariasis","secondary_identifiers":["MEDGEN:21221","UMLS:C0040522","DOID:3107"],"synonyms":[{"name":"Toxascaris caused disease or disorder","type":"exact"},{"name":"Toxascaris disease or disorder","type":"exact"},{"name":"Toxascaris infectious disease","type":"exact"}],"termid":"MONDO:0005987","xrefs":{"Monarch":{"xref_id":"0005987"}}}


id: MONDO:0009614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of methylmalonic aciduria, caused by mutation(s) in the MMAB gene, encoding cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial.","definition_xrefs":["NCIT:C142172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B12-responsive methylmalonic acidemia","termid":"MONDO:0017214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"methylmalonic aciduria, cblB type","secondary_identifiers":["UMLS:C1855102","OMIM:251110","MEDGEN:344420","Orphanet:79311","NANDO:1200796","NANDO:2201106","GARD:9479","DOID:0060743"],"synonyms":[{"name":"methylmalonic acidemia cblB type","type":"exact"},{"name":"methylmalonic acidemia, cblB type","type":"exact"},{"name":"methylmalonic aciduria cblB type","type":"exact"},{"name":"methylmalonic aciduria, cblB type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, cblB type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblB complementation type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblB type","type":"related"},{"name":"vitamin B12-responsive methylmalonic acidemia type cblB","type":"exact"},{"name":"vitamin B12-responsive methylmalonic aciduria, type cblB","type":"exact"}],"termid":"MONDO:0009614","xrefs":{"Monarch":{"xref_id":"0009614"}}}


id: GO:1901307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"positively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spermidine biosynthetic process","synonyms":[{"name":"activation of spermidine anabolism","type":"exact"},{"name":"activation of spermidine biosynthesis","type":"exact"},{"name":"activation of spermidine biosynthetic process","type":"narrow"},{"name":"activation of spermidine formation","type":"exact"},{"name":"activation of spermidine synthesis","type":"exact"},{"name":"positive regulation of spermidine anabolism","type":"exact"},{"name":"positive regulation of spermidine biosynthesis","type":"exact"},{"name":"positive regulation of spermidine formation","type":"exact"},{"name":"positive regulation of spermidine synthesis","type":"exact"},{"name":"up regulation of spermidine anabolism","type":"exact"},{"name":"up regulation of spermidine biosynthesis","type":"exact"},{"name":"up regulation of spermidine biosynthetic process","type":"exact"},{"name":"up regulation of spermidine formation","type":"exact"},{"name":"up regulation of spermidine synthesis","type":"exact"},{"name":"up-regulation of spermidine anabolism","type":"exact"},{"name":"up-regulation of spermidine biosynthesis","type":"exact"},{"name":"up-regulation of spermidine biosynthetic process","type":"exact"},{"name":"up-regulation of spermidine formation","type":"exact"},{"name":"up-regulation of spermidine synthesis","type":"exact"},{"name":"upregulation of spermidine anabolism","type":"exact"},{"name":"upregulation of spermidine biosynthesis","type":"exact"},{"name":"upregulation of spermidine biosynthetic process","type":"exact"},{"name":"upregulation of spermidine formation","type":"exact"},{"name":"upregulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901307"}


id: GO:0072479
data:
  {"annotated_genes":["SJAG_00082","SJAG_01805","SJAG_04140","SJAG_01837","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93564,89748,102170,110999,116487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle spindle assembly checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic spindle checkpoint signaling","termid":"GO:0072476"},{"relation_name":"is_a","term_name":"response to spindle assembly checkpoint signaling","termid":"GO:0072485"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044811"],"synonyms":[{"name":"mitotic cell cycle spindle assembly checkpoint effector process","type":"exact"},{"name":"response to Dma1-dependent checkpoint signaling","type":"narrow"},{"name":"response to Dma1-dependent checkpoint signalling","type":"narrow"},{"name":"response to signal involved in mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"GO:0072479","terms_by_termid":{"GO:0140429":null}}


id: GO:1901802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,5-anhydro-D-fructose.","definition_xrefs":["PMID:15716041","GOC:TermGenie","MetaCyc:PWY-6992","UniPathway:UPA00738","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"1,5-anhydro-D-fructose metabolic process","termid":"GO:1901801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose catabolic process","synonyms":[{"name":"1,5-anhydro-D-fructose breakdown","type":"exact"},{"name":"1,5-anhydro-D-fructose catabolism","type":"exact"},{"name":"1,5-anhydro-D-fructose degradation","type":"exact"}],"termid":"GO:1901802"}


id: PBO:0070182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 97 pseudogene","termid":"PBO:0070182"}


id: GO:0043036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Plant storage body for amylose and amylopectin, 1-100um in diameter. Also contains small amounts of enzymes, amino acids, lipids and nucleic acids. The shape of the grain varies widely amongst species, but is often spherical or disk-shaped.","definition_xrefs":["PMID:11217978","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"starch grain","synonyms":[{"name":"starch granule","type":"exact"}],"termid":"GO:0043036"}


id: MONDO:0015781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Facial dysmorphism-shawl scrotum-joint laxity syndrome is characterized by facial dysmorphism (hypertelorism, telecanthus, downslanting palpebral fissures, ptosis, malar hypoplasia, broad nasal bridge, thin upper lip, smooth philtrum, and low-set prominent ears) and associated with joint anomalies (genu valgum or cubitus valgus, hyper-extensible joints, etc.). It has been described in two patients (a mother and her son). The boy also had hypoplastic shawl scrotum and cryptorchidism, and the mother had mild intellectual deficit.","definition_xrefs":["Orphanet:1778"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism-shawl scrotum-joint laxity syndrome","secondary_identifiers":["SCTID:716337006","MESH:C537529","UMLS:C2931522","MEDGEN:419099","GARD:4778"],"synonyms":[{"name":"Seaver Cassidy syndrome","type":"related"},{"name":"Seaver-Cassidy syndrome","type":"exact"},{"name":"facial dysmorphism shawl scrotum joint laxity","type":"related"},{"name":"hypertelorism, downslanting palpebral fissures, malar hypoplasia, and apparently low-set ears associated with joint and scrotal anomalies","type":"related"}],"termid":"MONDO:0015781","xrefs":{"Monarch":{"xref_id":"0015781"}}}


id: PBO:0027444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_VLP_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0027444"}


id: MONDO:0002129
data:
  {"annotated_genes":["SJAG_01349","SJAG_05979","SJAG_04287","SJAG_03905","SJAG_03453","SJAG_01748","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86961,86959,87114,87115,86960,86962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[85920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the bone or articular cartilage.","definition_xrefs":["NCIT:C4016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_04287":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D001859","MEDGEN:79002","SCTID:428281000","ICD9:170.9","UMLS:C0279530","CSP:2019-1041","DOID:184","EFO:1000350"],"synonyms":[{"name":"CA - bone cancer","type":"exact"},{"name":"bone cancer","type":"exact"},{"name":"bone neoplasm","type":"broad"},{"name":"bone tumor","type":"broad"},{"name":"bone tumour","type":"broad"},{"name":"cancer of bone","type":"exact"},{"name":"cancer of skeletal element","type":"exact"},{"name":"cancer of the bone","type":"exact"},{"name":"malignant bone neoplasm","type":"exact"},{"name":"malignant bone tumor","type":"exact"},{"name":"malignant bone tumour","type":"exact"},{"name":"malignant neoplasm of bone","type":"exact"},{"name":"malignant neoplasm of skeletal element","type":"exact"},{"name":"malignant neoplasm of the bone","type":"exact"},{"name":"malignant osseous neoplasm","type":"exact"},{"name":"malignant osseous tumor","type":"exact"},{"name":"malignant osseous tumour","type":"exact"},{"name":"malignant skeletal element neoplasm","type":"exact"},{"name":"malignant tumor of bone","type":"exact"},{"name":"malignant tumor of the bone","type":"exact"},{"name":"malignant tumour of bone","type":"exact"},{"name":"malignant tumour of the bone","type":"exact"},{"name":"osseous cancer","type":"exact"},{"name":"osseous tumor","type":"broad"},{"name":"osseous tumour","type":"broad"},{"name":"skeletal element cancer","type":"exact"}],"termid":"MONDO:0002129","terms_by_termid":{"MONDO:0002629":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0002129"}}}


id: GO:0019233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances. This is a neurological process.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of pain","secondary_identifiers":["Wikipedia:Nociception"],"synonyms":[{"name":"nociception","type":"related"},{"name":"perception of physiological pain","type":"narrow"}],"termid":"GO:0019233"}


id: PR:P32372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad4 gene.","definition_xrefs":["UniProtKB:P32372","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-M checkpoint control protein rad4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.18c","synonyms":[{"name":"P74 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad4","type":"exact"},{"name":"protein cut5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32372"}


id: MONDO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vestibulocochlear nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"retrocochlear disease","termid":"MONDO:0002453"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibulocochlear nerve disorder","secondary_identifiers":["DOID:12657","ICD9:388.5","MESH:D000160","NCIT:C27207","MEDGEN:1724","SCTID:77949003","UMLS:C0001163"],"synonyms":[{"name":"acoustic nerve disease","type":"exact"},{"name":"acoustic nerve disorder","type":"exact"},{"name":"acoustic nerve disorder NOS","type":"exact"},{"name":"disease of vestibulocochlear nerve","type":"exact"},{"name":"disease or disorder of vestibulocochlear nerve","type":"exact"},{"name":"disorder of acoustic nerve","type":"exact"},{"name":"disorder of acoustovestibular nerve","type":"related"},{"name":"disorder of eighth nerve","type":"related"},{"name":"disorder of the vestibulocochlear nerve","type":"related"},{"name":"disorder of vestibulocochlear nerve","type":"exact"},{"name":"vestibulocochlear nerve disease","type":"exact"},{"name":"vestibulocochlear nerve disease or disorder","type":"exact"},{"name":"vestibulocochlear nerve disorder","type":"exact"}],"termid":"MONDO:0001563","xrefs":{"Monarch":{"xref_id":"0001563"}}}


id: GO:0110089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["PMID:18940801","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"}


id: GO:1990179
data:
  {"annotated_genes":["SJAG_00279","SJAG_02831","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92085,110597,118451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the actomyosin contractile ring.","definition_xrefs":["PMID:23349808","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring","type":"exact"}],"termid":"GO:1990179","terms_by_termid":{"GO:1904498":null}}


id: PBO:0057449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 569","termid":"PBO:0057449"}


id: PBO:0069218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 473, pseudogene","termid":"PBO:0069218"}


id: FYPO:0003885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NAD(P)H oxidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal NAD(P)H oxidase activity","termid":"FYPO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased NAD(P)H oxidase activity","synonyms":[{"name":"reduced NAD(P)H oxidase activity","type":"exact"}],"termid":"FYPO:0003885"}


id: GO:0045854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bicoid mRNA localization","synonyms":[{"name":"activation of bicoid mRNA localization","type":"narrow"},{"name":"positive regulation of bicoid mRNA localisation","type":"exact"},{"name":"stimulation of bicoid mRNA localization","type":"narrow"},{"name":"up regulation of bicoid mRNA localization","type":"exact"},{"name":"up-regulation of bicoid mRNA localization","type":"exact"},{"name":"upregulation of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045854"}


id: MONDO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cyst","secondary_identifiers":["SCTID:79883001","HP:0000138","UMLS:C0029927","DOID:5119","MESH:D010048","ICD9:620.2","MEDGEN:14540"],"synonyms":[{"name":"corpus luteum cyst","type":"related"},{"name":"corpus luteum cysts","type":"related"},{"name":"cyst, corpus luteum","type":"related"},{"name":"cyst, ovarian","type":"related"},{"name":"cysts, corpus luteum","type":"related"},{"name":"cysts, ovarian","type":"related"},{"name":"ovarian cyst","type":"exact"},{"name":"ovarian cyst (disease)","type":"exact"}],"termid":"MONDO:0003282","xrefs":{"Monarch":{"xref_id":"0003282"}}}


id: PBO:0034465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_magnesium","termid":"PBO:0034465"}


id: GO:0032413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of ion transmembrane transporter activity","synonyms":[{"name":"down regulation of ion transporter activity","type":"exact"},{"name":"down-regulation of ion transporter activity","type":"exact"},{"name":"downregulation of ion transporter activity","type":"exact"},{"name":"inhibition of ion transporter activity","type":"narrow"},{"name":"negative regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032413"}


id: PBO:0061183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 13-1","termid":"PBO:0061183"}


id: PBO:0078723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 3-1","termid":"PBO:0078723"}


id: PBO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family","termid":"PBO:0001260"}


id: PBO:0041538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 78","termid":"PBO:0041538"}


id: GO:0021669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 6. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GOC:curators","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 formation","termid":"GO:0021669"}


id: PBO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt3","termid":"PBO:0001420"}


id: GO:0099524
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the cytosol consisting of all cytosol that is part of the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic region","termid":"GO:0099522"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"postsynaptic cytosol","termid":"GO:0099524"}


id: PBO:0050187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 4","termid":"PBO:0050187"}


id: GO:1903593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of histamine secretion by mast cell.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:18253931","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"histamine secretion by mast cell","termid":"GO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of histamine secretion by mast cell","termid":"GO:1903593"}


id: MONDO:0005511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of janus kinase-3 causing the near absence of T lymphocytes and Natural killer cells; and normal or elevated B lymphocytes due to an autosomal recessive variant of severe combined immunodeficiency.","definition_xrefs":["EFO:0005565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"janus kinase-3 deficiency","secondary_identifiers":["DOID:0060008","Wikipedia:Janus_kinase_3_deficiency"],"termid":"MONDO:0005511","xrefs":{"Monarch":{"xref_id":"0005511"}}}


id: PBO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L20 (predicted)","termid":"PBO:0002005"}


id: FYPO:0002998
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118956,119174],"is_not":false,"summary":null,"term":"FYPO:0002998"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of actin filaments and associated proteins does not occur, resulting in the failure to form an actomyosin contractile ring, and in which medial cortical nodes form irregular clumps instead of coalescing into the medial cortex ring.","definition_xrefs":["PMID:24127216","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished actomyosin contractile ring assembly","termid":"FYPO:0001009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000032","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"abolished actomyosin contractile ring assembly, clumped medial cortical nodes","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"abolished actomyosin contractile ring assembly, clumped cytokinesis nodes","type":"exact"},{"name":"abolished actomyosin contractile ring assembly, clumped medial cortical nodes during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring assembly, clumped medial cortical nodes, during vegetative growth","type":"exact"},{"name":"abolished actomyosin contractile ring formation, clumped medial cortical nodes","type":"related"},{"name":"abolished contractile ring assembly, clumped medial cortical nodes","type":"exact"},{"name":"abolished cytokinetic contractile ring assembly, clumped medial cortical nodes","type":"exact"},{"name":"abolished cytokinetic ring assembly, clumped medial cortical nodes","type":"related"},{"name":"abolished cytokinetic ring formation, clumped medial cortical nodes","type":"related"},{"name":"abolished mitotic contractile ring assembly, clumped medial cortical nodes","type":"exact"},{"name":"actomyosin contractile ring assembly abolished, clumped medial cortical nodes","type":"exact"},{"name":"cytokinesis defects, contractile ring actin, absent, with clumped medial cortical nodes","type":"related"}],"termid":"FYPO:0002998","terms_by_termid":{"FYECO:0000248":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: GO:0099155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of noradrenaline (norepinephrine) a presynapse, across a chemical synapse, the subsequent activation of noradrenaline receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic transmission, noradrenergic","synonyms":[{"name":"noradrenergic synaptic transmission","type":"exact"}],"termid":"GO:0099155"}


id: GO:0010960
data:
  {"annotated_genes":["SJAG_02578","SJAG_03516","SJAG_04111"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57358],"is_not":false,"summary":null,"term":"GO:0010960"},{"annotations":[69852,74170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of magnesium ions within an organism or cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"magnesium ion homeostasis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0010960","terms_by_termid":{"GO:0010960":null,"GO:0010961":null}}


id: PBO:0080319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 83 pseudogene","termid":"PBO:0080319"}


id: PBO:0028229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_trehalose_level_during_cellular_response_to_salt_stress","termid":"PBO:0028229"}


id: MONDO:0011912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MYO6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 37","secondary_identifiers":["UMLS:C1843028","OMIM:607821","DOID:0110495","GARD:22605","MEDGEN:375076","MESH:C564331"],"synonyms":[{"name":"DFNB37","type":"narrow"},{"name":"MYO6 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 37","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 37","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MYO6","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 37","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 37","type":"exact"},{"name":"deafness, autosomal recessive 37","type":"narrow"},{"name":"deafness, autosomal recessive type 37","type":"narrow"}],"termid":"MONDO:0011912","xrefs":{"Monarch":{"xref_id":"0011912"}}}


id: GO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antipodal cell differentiation","synonyms":[{"name":"activation of antipodal cell differentiation","type":"narrow"},{"name":"stimulation of antipodal cell differentiation","type":"narrow"},{"name":"up regulation of antipodal cell differentiation","type":"exact"},{"name":"up-regulation of antipodal cell differentiation","type":"exact"},{"name":"upregulation of antipodal cell differentiation","type":"exact"}],"termid":"GO:0045690"}


id: GO:0005026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, binds to and catalyzes the phosphorylation of a type I TGF-beta receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor activity","termid":"GO:0005024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0004672","GO:0038023","GO:0016301","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"transforming growth factor beta receptor activity, type II","secondary_identifiers":["Reactome:R-HSA-170843"],"synonyms":[{"name":"transforming growth factor beta ligand binding to type II receptor","type":"related"},{"name":"type II TGF-beta receptor activity","type":"exact"},{"name":"type II TGFbeta receptor activity","type":"exact"},{"name":"type II transforming growth factor beta receptor activity","type":"exact"}],"termid":"GO:0005026"}


id: MONDO:0004206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the pulmonary vein. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5374"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pulmonary artery leiomyosarcoma","termid":"MONDO:0004207"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"},{"relation_name":"is_a","term_name":"great vessel cancer","termid":"MONDO:0040676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary vein leiomyosarcoma","secondary_identifiers":["DOID:7388","MEDGEN:235513","UMLS:C1335575"],"synonyms":[{"name":"leiomyosarcoma of pulmonary vein","type":"exact"},{"name":"leiomyosarcoma of the pulmonary vein","type":"exact"},{"name":"pulmonary vein leiomyosarcoma","type":"exact"}],"termid":"MONDO:0004206","xrefs":{"Monarch":{"xref_id":"0004206"}}}


id: _global:genome_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome_of","termid":"_global:genome_of"}


id: PBO:0033783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-reversed_RTS1_barrier_polarity","termid":"PBO:0033783"}


id: FYPO:0005298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of oxidized DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000653"],"is_obsolete":false,"name":"normal oxidized DNA binding","termid":"FYPO:0005298"}


id: GO:0043046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine that contributes to the establishment of DNA methylation patterns in the gamete.","definition_xrefs":["GOC:go_curators","PMID:12138111"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation involved in gamete generation (obsolete GO:0043046)","synonyms":[{"name":"de novo DNA methylation","type":"related"}],"termid":"GO:0043046"}


id: SO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence that is transcribed. This region may cover the transcript of a gene, it may emcompas the sequence covered by all of the transcripts of a alternately spliced gene, or it may cover the region transcribed by a polycistronic transcript. A gene may have 1 or more transcribed regions and a transcribed_region may belong to one or more genes.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000502 transcribed_region (obsolete SO:0000502)","termid":"SO:0000502"}


id: MONDO:0044782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ulcerated lesion in the esophageal wall.","definition_xrefs":["NCIT:C26950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"ulcer disease","termid":"MONDO:0043839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal ulcer","secondary_identifiers":["HP:0004791","MEDGEN:56254","UMLS:C0151970"],"synonyms":[{"name":"esophageal ulcer","type":"exact"},{"name":"esophagus ulcer","type":"exact"},{"name":"esophagus ulcer disease","type":"exact"},{"name":"oesophagus ulcer","type":"exact"},{"name":"oesophagus ulcer disease","type":"exact"},{"name":"ulcer disease of esophagus","type":"exact"},{"name":"ulcer disease of oesophagus","type":"exact"}],"termid":"MONDO:0044782","xrefs":{"Monarch":{"xref_id":"0044782"}}}


id: PBO:0089031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) kinase Pkp1","termid":"PBO:0089031"}


id: PR:000027602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed phosphorylated form that has been phosphorylated by Haspin Schizosaccharomyces pombe. Example: UniProtKB:P10651-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Phos(T3)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/Phos:1","type":"exact"},{"name":"hht3/InitMet-/Phos:(T4)","type":"exact"},{"name":"hht3/Phos(T3)","type":"exact"}],"termid":"PR:000027602"}


id: PBO:0069435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 700, pseudogene","termid":"PBO:0069435"}


id: GO:1901834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deadenylation-independent decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:0031087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"regulation of deadenylylation-independent decapping","type":"exact"}],"termid":"GO:1901834"}


id: PBO:0072823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1","termid":"PBO:0072823"}


id: PBO:0061704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 4","termid":"PBO:0061704"}


id: GO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation","termid":"GO:0048762"}


id: PBO:0013096
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sty1 iNteracting stress Response protein","termid":"PBO:0013096"}


id: MONDO:0033123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exudative vitreoretinopathy","termid":"MONDO:0019516"},{"relation_name":"is_a","term_name":"CTNNB1-related neurodevelopmental disorder and/or vitreoretinopathy","termid":"MONDO:0100571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"exudative vitreoretinopathy 7","secondary_identifiers":["GARD:16238","OMIM:617572","DOID:0080264","MEDGEN:1626650","UMLS:C4539767"],"synonyms":[{"name":"EVR7","type":"related"},{"name":"exudative vitreoretinopathy 7","type":"exact"}],"termid":"MONDO:0033123","xrefs":{"Monarch":{"xref_id":"0033123"}}}


id: SO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_alteration where the source of the alteration is due to an artifact in the base-calling or assembly process.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_alteration_artifact","synonyms":[{"name":"sequence alteration artifact","type":"exact"}],"termid":"SO:0002172"}


id: PBO:0071841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 36","termid":"PBO:0071841"}


id: FYPO:0005454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere assembly, i.e. the aggregation, arrangement and bonding together of a set of components to form a telomere at a double-stranded DNA end, is abnormal.","definition_xrefs":["PomBase:mah","GO:0032202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"abnormal telomere assembly","synonyms":[{"name":"abnormal telomere assembly during mitotic cell cycle","type":"related"},{"name":"abnormal telomere assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005454"}


id: PBO:0030466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pantothenate_import","termid":"PBO:0030466"}


id: SO:1000031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal structure variation whereby more than one chromosome is involved.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"interchromosomal","termid":"SO:0001511"},{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_mutation","synonyms":[{"name":"interchromosomal mutation","type":"exact"}],"termid":"SO:1000031"}


id: GO:0090694
data:
  {"annotated_genes":["SJAG_00682","SJAG_00796"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74753,89418],"is_not":false,"summary":null,"term":"GO:0090694"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved heterodimeric protein complex (comprising adherin and the chromatid cohesion factor MAU2/Scc4/Ssl3) required for the loading of a cohesin, complex onto DNA.","definition_xrefs":["GOC:vw","PMID:24291789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMC loading complex","termid":"GO:0032116"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Scc2-Scc4 cohesin loading complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Mis4-Ssl3 cohesin loading complex","type":"exact"}],"termid":"GO:0090694","terms_by_termid":{"GO:0090694":null}}


id: GO:0009407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044248","GO:0008150","GO:0098754"],"is_obsolete":false,"name":"toxin catabolic process","synonyms":[{"name":"toxin breakdown","type":"exact"},{"name":"toxin catabolism","type":"exact"},{"name":"toxin degradation","type":"exact"}],"termid":"GO:0009407"}


id: PBO:0087305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and TPR protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay; mutations in the human ortholog, TTC37, causes Syndromic diarrhea/Trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0087305"}


id: MONDO:0025445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wieacker-Wolff syndrome (spectrum)","secondary_identifiers":["OMIMPS:314580"],"synonyms":[{"name":"ZARD","type":"exact"},{"name":"ZC4H2-associated disorder","type":"exact"},{"name":"ZC4H2-associated rare disorders","type":"exact"}],"termid":"MONDO:0025445","xrefs":{"Monarch":{"xref_id":"0025445"}}}


id: GO:0070014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses oligo-1,6-glucosidase activity; the complex is a heterodimer located in the cell membrane, and is formed by proteolytic cleavage of a single precursor polypeptide. The two subunits have different substrate specificities.","definition_xrefs":["PMID:3366777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"glucosidase complex","termid":"GO:1902687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"sucrase-isomaltase complex","secondary_identifiers":["Wikipedia:Sucrase-isomaltase"],"synonyms":[{"name":"oligo-1,6-glucosidase complex","type":"related"}],"termid":"GO:0070014"}


id: GO:0061395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (obsolete GO:0061395)","termid":"GO:0061395"}


id: GO:1904509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to basolateral plasma membrane.","definition_xrefs":["GOC:kmv","GO_REF:0000058","PMID:26115433","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell periphery","termid":"GO:1904376"},{"relation_name":"is_a","term_name":"regulation of protein localization to basolateral plasma membrane","termid":"GO:1904508"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein localization to basolateral plasma membrane","termid":"GO:1903361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to basolateral plasma membrane","synonyms":[{"name":"down regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"down regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"down regulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"down regulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"inhibition of protein localisation in basolateral plasma membrane","type":"narrow"},{"name":"inhibition of protein localisation to basolateral plasma membrane","type":"narrow"},{"name":"inhibition of protein localization in basolateral plasma membrane","type":"narrow"},{"name":"inhibition of protein localization to basolateral plasma membrane","type":"narrow"},{"name":"negative regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"negative regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"negative regulation of protein localization in basolateral plasma membrane","type":"exact"}],"termid":"GO:1904509"}


id: MONDO:0003478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:C8578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood ependymoma","secondary_identifiers":["DOID:5509","MEDGEN:343609","UMLS:C1851584","MESH:C531673"],"synonyms":[{"name":"childhood ependymoma","type":"exact"},{"name":"ependymoma","type":"broad"},{"name":"ependymoma of childhood","type":"exact"},{"name":"paediatric ependymoma","type":"exact"},{"name":"pediatric ependymoma","type":"exact"}],"termid":"MONDO:0003478","xrefs":{"Monarch":{"xref_id":"0003478"}}}


id: GO:2000308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tumor necrosis factor (ligand) superfamily member 11 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:2000307"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:0072535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"negative regulation of RANKL production","type":"exact"},{"name":"negative regulation of TNFSF11 production","type":"exact"}],"termid":"GO:2000308"}


id: PBO:0041371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4orf46 pseudogene 3","termid":"PBO:0041371"}


id: MONDO:1012111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoadrenocorticism, non-human animal","termid":"MONDO:1011675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, horse","secondary_identifiers":["OMIA:000519-9796"],"termid":"MONDO:1012111","xrefs":{"Monarch":{"xref_id":"1012111"}}}


id: PBO:0017544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, splicing factor 45 ortholog (predicted)","termid":"PBO:0017544"}


id: GO:0099117
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103536],"is_not":false,"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"The movement of a protein along a microtubule to the cell-tip, mediated by motor proteins.","definition_xrefs":["PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein transport along microtubule to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099117","terms_by_termid":{"GO:0099117":null}}


id: PBO:0040998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 3","termid":"PBO:0040998"}


id: MOD:01954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to dehydroalanine.","definition_xrefs":["PubMed:1815586","PubMed:21420488","PubMed:20805503","PubMed:7947813","ChEBI:17123","PubMed:1547888","PubMed:2914619","RESID:AA0181","PubMed:10220322","PubMed:8239649","PubMed:22031445","PubMed:12781460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Sec)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01954"}


id: MONDO:0002752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the ovary. It is the most common type of ovarian carcinoma. It includes the serous adenocarcinoma, mucinous adenocarcinoma, clear cell adenocarcinoma, and endometrioid adenocarcinoma.","definition_xrefs":["NCIT:C7700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian adenocarcinoma","secondary_identifiers":["EFO:0006460","MEDGEN:181757","MedDRA:10051938","Orphanet:213504","UMLS:C0948216","DOID:3713","GARD:20466"],"synonyms":[{"name":"adenocarcinoma of ovary","type":"exact"},{"name":"adenocarcinoma of the ovary","type":"exact"},{"name":"ovarian adenocarcinoma","type":"exact"},{"name":"ovary adenocarcinoma","type":"exact"}],"termid":"MONDO:0002752","xrefs":{"Monarch":{"xref_id":"0002752"}}}


id: MONDO:0032647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete global developmental delay, lung cysts, overgrowth, and wilms tumor (obsolete MONDO:0032647)","termid":"MONDO:0032647","xrefs":{"Monarch":{"xref_id":"0032647"}}}


id: PBO:0061630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 13","termid":"PBO:0061630"}


id: GO:0031443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within fast-twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The fast-twitch skeletal muscle is characterized by fast time parameters, high force development and fatiguability.","definition_xrefs":["GOC:mah","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"fast-twitch skeletal fiber contraction","type":"exact"},{"name":"fast-twitch skeletal fibre contraction","type":"exact"},{"name":"fast-twitch skeletal muscle fibre contraction","type":"exact"},{"name":"fast-twitch skeletal myofiber contraction","type":"exact"},{"name":"fast-twitch skeletal myofibre contraction","type":"exact"}],"termid":"GO:0031443"}


id: PBO:0042435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 42","termid":"PBO:0042435"}


id: PBO:0076729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcobalamin 2","termid":"PBO:0076729"}


id: PBO:0071256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 97","termid":"PBO:0071256"}


id: SO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_trimethylation_site","synonyms":[{"name":"H3K27 tri-methylation site","type":"exact"},{"name":"H3K27Me3","type":"related"}],"termid":"SO:0001709"}


id: GO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the inactivation of gene expression by a posttranscriptional mechanism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing","termid":"GO:0060147"},{"relation_name":"negatively_regulates","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-transcriptional gene silencing","synonyms":[{"name":"negative regulation of posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0060149"}


id: GO:0030622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U4atac small nuclear RNA (U4atac snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"U4atac snRNA binding","termid":"GO:0030622"}


id: PBO:0075583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 7","termid":"PBO:0075583"}


id: PBO:0048882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 1","termid":"PBO:0048882"}


id: FYPO:0004936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter that contains a pombe cell cycle box (PCB) by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["GO:0000978","SO:0001871","PMID:12411492","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","termid":"FYPO:0002003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000653","FYPO:0000707"],"is_obsolete":false,"name":"abolished DNA binding at PCB","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished at PCB","type":"exact"},{"name":"abolished DNA binding at pombe cell cycle box","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at PCB","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at pombe cell cycle box","type":"exact"},{"name":"abolished transcription factor binding to PCB-containing promoter region","type":"related"}],"termid":"FYPO:0004936"}


id: GO:0018555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene + NADH + H+ + O2 = NAD+ + cis-3,4-dihydroxy-3,4-dihydrophenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0455"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene dioxygenase activity (obsolete GO:0018555)","termid":"GO:0018555"}


id: FYECO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which M-factor was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ mating pheromone","termid":"FYECO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ M-factor","synonyms":[{"name":"M factor added","type":"exact"}],"termid":"FYECO:0000040"}


id: PBO:0006171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes_to","termid":"PBO:0006171"}


id: PBO:0112232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome-associated ubiquitin receptor, S. cerevisiae Rad23 homolog, Rhp23","termid":"PBO:0112232"}


id: GO:1903229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthosine.","definition_xrefs":["GOC:TermGenie","PMID:7007809","GO_REF:0000068","PMID:7559336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"},{"relation_name":"is_a","term_name":"xanthosine metabolic process","termid":"GO:1903227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"xanthosine biosynthetic process","synonyms":[{"name":"xanthosine anabolism","type":"exact"},{"name":"xanthosine biosynthesis","type":"exact"},{"name":"xanthosine formation","type":"exact"},{"name":"xanthosine synthesis","type":"exact"}],"termid":"GO:1903229"}


id: GO:0003887
data:
  {"annotated_genes":["SJAG_02658","SJAG_04089","SJAG_03906","SJAG_00814","SJAG_04791","SJAG_00153","SJAG_05197","SJAG_02908","SJAG_00611","SJAG_16460","SJAG_05239","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57943,70067,72960,73914,74600,74765,74835,76674,77502,77709,102617,102668],"is_not":false,"summary":null,"term":"GO:0003887"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time.","definition_xrefs":["EC:2.7.7.7","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase activity","termid":"GO:0034061"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04791":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0140097","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"DNA-directed DNA polymerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DNA-DIRECTED-DNA-POLYMERASE-RXN","Reactome:R-HSA-9710480","Reactome:R-HSA-110368","GO:0008723","GO:0003890","GO:0016451","Reactome:R-HSA-5649883","GO:0016450","GO:0003889","GO:0016448","Reactome:R-HSA-174427","Reactome:R-HSA-5687640","Reactome:R-HSA-68950","GO:0003888","GO:0016000","Reactome:R-HSA-111253","GO:0003893","Reactome:R-HSA-9914364","Reactome:R-HSA-5656158","Reactome:R-HSA-6786166","Reactome:R-HSA-5687360","Reactome:R-HSA-5693593","Reactome:R-HSA-164505","Reactome:R-HSA-73932","Reactome:R-HSA-174444","GO:0019984","Reactome:R-HSA-110311","Reactome:R-HSA-110319","GO:0003894","GO:0016452","Reactome:R-HSA-110317","Reactome:R-HSA-5653840","Reactome:R-HSA-5655892","Reactome:R-HSA-5655965","Reactome:R-HSA-5656148","Reactome:R-HSA-5691001","Reactome:R-HSA-5649723","Reactome:R-HSA-6782208","Reactome:R-HSA-69116","GO:0015999","GO:0016449","Reactome:R-HSA-9914498","Reactome:R-HSA-5358579","GO:0003891","GO:0003895","Reactome:R-HSA-164513"],"synonyms":[{"name":"DNA duplicase activity","type":"related"},{"name":"DNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"DNA polymerase I","type":"narrow"},{"name":"DNA polymerase II","type":"narrow"},{"name":"DNA polymerase III","type":"narrow"},{"name":"DNA polymerase V activity","type":"narrow"},{"name":"DNA polymerase alpha","type":"narrow"},{"name":"DNA polymerase beta","type":"narrow"},{"name":"DNA polymerase gamma","type":"narrow"},{"name":"DNA replicase activity","type":"related"},{"name":"DNA-dependent DNA polymerase activity","type":"related"},{"name":"Klenow fragment","type":"narrow"},{"name":"Taq DNA polymerase","type":"narrow"},{"name":"Taq Pol I","type":"narrow"},{"name":"Tca DNA polymerase","type":"narrow"},{"name":"alpha DNA polymerase activity","type":"narrow"},{"name":"beta DNA polymerase activity","type":"narrow"},{"name":"delta DNA polymerase activity","type":"narrow"},{"name":"deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"deoxyribonucleic acid duplicase activity","type":"related"},{"name":"deoxyribonucleic duplicase activity","type":"related"},{"name":"deoxyribonucleic polymerase I","type":"narrow"},{"name":"duplicase","type":"broad"},{"name":"epsilon DNA polymerase activity","type":"narrow"},{"name":"eta DNA polymerase activity","type":"narrow"},{"name":"gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"iota DNA polymerase activity","type":"narrow"},{"name":"kappa DNA polymerase activity","type":"narrow"},{"name":"lambda DNA polymerase activity","type":"narrow"},{"name":"mu DNA polymerase activity","type":"narrow"},{"name":"nu DNA polymerase activity","type":"narrow"},{"name":"sequenase","type":"related"},{"name":"sigma DNA polymerase activity","type":"narrow"},{"name":"theta DNA polymerase activity","type":"narrow"},{"name":"zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:0003887","terms_by_termid":{"GO:0003887":null}}


id: PBO:0080960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 3","termid":"PBO:0080960"}


id: GO:0051888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of exogen, the shedding phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of exogen","termid":"GO:0051887"},{"relation_name":"positively_regulates","term_name":"exogen","termid":"GO:0042638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of exogen","synonyms":[{"name":"activation of exogen","type":"narrow"},{"name":"positive regulation of exogen","type":"related"},{"name":"stimulation of exogen","type":"narrow"},{"name":"up regulation of exogen","type":"related"},{"name":"up-regulation of exogen","type":"related"},{"name":"upregulation of exogen","type":"related"}],"termid":"GO:0051888"}


id: PBO:0004593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAseP RNAse MRP subunit Pop7 (predicted)","termid":"PBO:0004593"}


id: GO:0048939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell in the anterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell differentiation","termid":"GO:0048913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve glial cell development","termid":"GO:0048939"}


id: PBO:0031152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_myo-inositol_import","termid":"PBO:0031152"}


id: MONDO:0017191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic pheochromocytoma/secreting paraganglioma","termid":"MONDO:0017190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic pheochromocytoma","secondary_identifiers":["Orphanet:276624"],"termid":"MONDO:0017191","xrefs":{"Monarch":{"xref_id":"0017191"}}}


id: PBO:0113158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of modifier of aggregation-4 (MOAG-4) from worm and small EDRK-rich factor protein (SERF1a) from human; highly conserved enhancer of amyloid formation of Aβ40 and α-synuclein both in vitro and in vivo; protein displays very high degree of disorder, segment spanning residues 36E-65K has strong helical propensity","termid":"PBO:0113158"}


id: GO:0071116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta1 integrin complex bound to CYR61, a cysteine-rich protein involved in angiogenesis.","definition_xrefs":["PMID:12826661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha6-beta1 integrin-CYR61 complex","synonyms":[{"name":"ITGA6-ITGB1-CYR61 complex","type":"narrow"}],"termid":"GO:0071116"}


id: MONDO:0009323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Halothane hepatitis","secondary_identifiers":["MEDGEN:66842","MESH:C562477","OMIM:234350","SCTID:235873001","UMLS:C0241913"],"synonyms":[{"name":"Halothane hepatitis","type":"exact"}],"termid":"MONDO:0009323","xrefs":{"Monarch":{"xref_id":"0009323"}}}


id: PBO:0078091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 8","termid":"PBO:0078091"}


id: MONDO:0021165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm composed of large cells with large nuclei, prominent nucleoli, and abundant pale cytoplasm (Paget cells). Paget cell neoplasms include Paget disease of the nipple and extramammary Paget disease which may affect the vulva, penis, anus, skin and scrotum.","definition_xrefs":["NCIT:C7073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Paget disease","secondary_identifiers":["MEDGEN:277958","UMLS:C1368019"],"synonyms":[{"name":"Paget cell neoplasm","type":"broad"},{"name":"Paget disease","type":"exact"},{"name":"Paget's cell neoplasm","type":"exact"},{"name":"Paget's disease","type":"exact"}],"termid":"MONDO:0021165","xrefs":{"Monarch":{"xref_id":"0021165"}}}


id: GO:0031035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"myosin filament disassembly","synonyms":[{"name":"myosin depolymerization","type":"related"}],"termid":"GO:0031035"}


id: GO:0052862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endohydrolysis of (1->4)-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolysed is itself substituted at C-3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group (obsolete GO:0052862)","termid":"GO:0052862"}


id: PBO:0028053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_meiotic_cell_cycle","termid":"PBO:0028053"}


id: PBO:0067940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 242","termid":"PBO:0067940"}


id: PBO:0027889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_kinetochore_during_meiosis_I","termid":"PBO:0027889"}


id: PBO:0076356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 3","termid":"PBO:0076356"}


id: PBO:0048937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GON7 subunit of KEOPS complex","termid":"PBO:0048937"}


id: GO:0102506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanin betaine + ferulate + H+.","definition_xrefs":["RHEA:35427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose) activity","secondary_identifiers":["EC:2.4.1.299","KEGG_REACTION:R10261","MetaCyc:RXN-13967"],"termid":"GO:0102506"}


id: MONDO:0003295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by the presence of numerous small benign smooth muscle neoplasms located throughout the body.","definition_xrefs":["NCIT:C3748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomyomatosis","secondary_identifiers":["UMLS:C0206654","MESH:D018231","ICDO:8890/1","DOID:5138","MEDGEN:60203"],"synonyms":[{"name":"leiomyomatosis","type":"exact"},{"name":"leiomyomatosis, no ICD-O subtype","type":"exact"},{"name":"leiomyomatosis, no ICD-O subtype (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003295","xrefs":{"Monarch":{"xref_id":"0003295"}}}


id: MONDO:0958300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A round cell sarcoma with EWSR1-non-ETS fusion that is characterized by the presence of EWSR1-PATZ1 gene fusion.","definition_xrefs":["DOID:0081409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"round cell sarcoma with EWSR1-non-ETS fusion","termid":"MONDO:0958160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell sarcoma with EWSR1-PATZ1 gene fusion","secondary_identifiers":["UMLS:C5555053","MEDGEN:1791494"],"termid":"MONDO:0958300","xrefs":{"Monarch":{"xref_id":"0958300"}}}


id: PBO:0031635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gene_silencing","termid":"PBO:0031635"}


id: PATO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is the distance between the end of the inserted object and the surface of the object into which it penetrates.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion depth","termid":"PATO:0002207"}


id: PBO:0067075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 106, pseudogene","termid":"PBO:0067075"}


id: PBO:0027025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_histone_promoter","termid":"PBO:0027025"}


id: RO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has gene product y if and only if x is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_gene_product","termid":"RO:0002205"}


id: PBO:0051707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase J","termid":"PBO:0051707"}


id: PBO:0082973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; shuttles between nucleus and cytoplasm and is exported from the nucleus in an mRNA export-dependent manner; associates with translating ribosomes; involved in heme regulation of Hap1p as a component of the HMC complex, also involved in the organization of actin filaments; contains a La motif; SRO9 has a paralog, SLF1, that arose from the whole genome duplication","termid":"PBO:0082973"}


id: PBO:0080133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP associated protein A","termid":"PBO:0080133"}


id: MONDO:0019220
data:
  {"annotated_genes":["SJAG_01199","SJAG_04042","SJAG_04425","SJAG_04459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85003,85002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[85614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[86434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"An inherited metabolic disease affecting cobalamin (vitamin B12) intestinal absorption, transport in the blood, uptake by peripheral cells or cellular metabolism.","definition_xrefs":["PMID:35337626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"disorder of vitamin and non-protein cofactor absorption and transport","termid":"MONDO:0017758"},{"relation_name":"is_a","term_name":"vitamin B12 deficiency","termid":"MONDO:0020696"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01199":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of cobalamin metabolism and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1826150","Orphanet:79171","DOID:0050731","GARD:18951","UMLS:C5681844","icd11.foundation:936546617"],"synonyms":[{"name":"cobalamin deficiency","type":"broad"},{"name":"disorder of cobalamin metabolism and transport","type":"related"},{"name":"hypocobalaminemia","type":"broad"},{"name":"inborn disorder of cobalamin metabolism and transport","type":"exact"},{"name":"inborn error of cobalamin metabolic process","type":"exact"},{"name":"inborn vitamin B12 deficiency (disease)","type":"exact"},{"name":"rare inborn error of cobalamin metabolic process","type":"exact"}],"termid":"MONDO:0019220","terms_by_termid":{"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0019220"}}}


id: PR:O74818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carboxypeptidase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized carboxypeptidase C337.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.07c","secondary_identifiers":["UniProtKB:O74818"],"synonyms":[{"name":"Spom972h-CPB1","type":"exact"}],"termid":"PR:O74818"}


id: PBO:0087157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA lariat debranching enzyme; catalyzes debranching of lariat introns formed during pre-mRNA splicing; required for efficient Ty1 transposition; knockdown of human homolog Dbr1 rescues toxicity of RNA-binding proteins TDP-43 and FUS which are implicated in amyotrophic lateral sclerosis (ALS), suggests potential therapeutic target for ALS and related TDP-43 proteinopathies; human homolog DBR1 can complement yeast dbr1 null mutant","termid":"PBO:0087157"}


id: PBO:0116663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 4C","termid":"PBO:0116663"}


id: PBO:0036475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex ChAPs family (Chs5p-Arf1p-binding) protein Bch1","termid":"PBO:0036475"}


id: FYPO:0004037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to mercury ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to mercury ion","synonyms":[{"name":"decreased protein accumulation during cellular response to mercury ion","type":"related"},{"name":"decreased protein level during cellular response to mercury","type":"exact"},{"name":"decreased protein level during cellular response to mercury ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to mercury ion during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to mercury ion","type":"exact"}],"termid":"FYPO:0004037"}


id: PBO:0067010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 18, pseudogene","termid":"PBO:0067010"}


id: PBO:0043613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4 pseudogene 1","termid":"PBO:0043613"}


id: PBO:0066986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 289","termid":"PBO:0066986"}


id: PBO:0090327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr3","termid":"PBO:0090327"}


id: PBO:0027570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_pore_distribution_during_mitosis","termid":"PBO:0027570"}


id: MONDO:0015074
data:
  {"annotated_genes":["SJAG_04067","SJAG_03453","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85611,87054,87053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the thyroid gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"is_obsolete":false,"name":"thyroid tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:THYROID","MEDGEN:21546","GARD:19762","EFO:0003841","ICD9:239.7","Orphanet:100087","NCIT:C3414","UMLS:C0040136","SCTID:127018007","MONDO:0021217"],"synonyms":[{"name":"THYROID","type":"related"},{"name":"neoplasm of the thyroid","type":"exact"},{"name":"neoplasm of the thyroid gland","type":"exact"},{"name":"neoplasm of thyroid","type":"exact"},{"name":"neoplasm of thyroid gland","type":"exact"},{"name":"thyroid gland neoplasm","type":"exact"},{"name":"thyroid gland neoplasm (disease)","type":"exact"},{"name":"thyroid gland tumor","type":"exact"},{"name":"thyroid gland tumour","type":"exact"},{"name":"thyroid neoplasm","type":"exact"},{"name":"thyroid neoplasms","type":"exact"},{"name":"thyroid tumor","type":"exact"},{"name":"tumor of the thyroid","type":"exact"},{"name":"tumor of the thyroid gland","type":"exact"},{"name":"tumor of thyroid","type":"exact"},{"name":"tumor of thyroid gland","type":"exact"},{"name":"tumour of the thyroid","type":"exact"},{"name":"tumour of the thyroid gland","type":"exact"},{"name":"tumour of thyroid","type":"exact"},{"name":"tumour of thyroid gland","type":"exact"}],"termid":"MONDO:0015074","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0015074"}}}


id: PBO:0049769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 7","termid":"PBO:0049769"}


id: MONDO:0022831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart disease ptosis hypodontia craniostosis","termid":"MONDO:0022831","xrefs":{"Monarch":{"xref_id":"0022831"}}}


id: MONDO:0007736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete HPA 1 Recognition polymorphism, beta-globin-related (obsolete MONDO:0007736)","termid":"MONDO:0007736","xrefs":{"Monarch":{"xref_id":"0007736"}}}


id: PR:O94586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hnt1 gene.","definition_xrefs":["UniProtKB:O94586","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hit family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.14c","synonyms":[{"name":"Spom972h-hnt1","type":"exact"},{"name":"adenosine 5'-monophosphoramidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94586"}


id: MONDO:0009079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"DOORS syndrome (also known as DOOR syndrome) is a multiple congenital anomalies-intellectual disability syndrome characterized by sensorineural hearing loss (deafness), onychodystrophy, osteodystrophy, mild to profound intellectual disability, and seizures. Isolated seizure disorders and isolated hearing loss have also been reported in individuals as a proposed spectrum of DOORS syndrome.","definition_xrefs":["PMID:25769375","PMID:24729547","PMID:25557349","PMID:24291220","PMID:26371875","PMID:24729539","Orphanet:79500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOORS syndrome","secondary_identifiers":["MEDGEN:208648","GARD:1685","UMLS:C0795934","NORD:1058","OMIM:220500","DOID:0111627","MESH:C563052","SCTID:719800009"],"synonyms":[{"name":"DOORS","type":"related"},{"name":"DOORS syndrome","type":"exact"},{"name":"Digitorenocerebral syndrome","type":"related"},{"name":"Eronen syndrome","type":"related"},{"name":"autosomal recessive deafness-onychodystrophy syndrome","type":"exact"},{"name":"brachydactyly due to absence of distal phalanges","type":"related"},{"name":"deafness onychodystrophy osteodystrophy and intellectual disability syndrome","type":"related"},{"name":"deafness onychodystrophy osteodystrophy and mental retardation syndrome","type":"related"},{"name":"deafness, onychodystrophy, osteodystrophy, intellectual disability, and seizures syndrome","type":"related"},{"name":"deafness, onychodystrophy, osteodystrophy, mental retardation, and seizures syndrome","type":"related"},{"name":"deafness-onychodystrophy-osteodystrophy-intellectual disability syndrome","type":"exact"},{"name":"deafness-onychodystrophy-osteodystrophy-intellectual disability-seizures syndrome","type":"exact"},{"name":"deafness-onychoosteodystrophy-intellectual disability syndrome","type":"exact"},{"name":"door syndrome","type":"exact"},{"name":"drc syndrome","type":"related"}],"termid":"MONDO:0009079","xrefs":{"Monarch":{"xref_id":"0009079"}}}


id: PBO:0081437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 286B (pseudogene)","termid":"PBO:0081437"}


id: PBO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.11","termid":"PBO:0001930"}


id: PBO:0061317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A2","termid":"PBO:0061317"}


id: PBO:0066974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 277","termid":"PBO:0066974"}


id: GO:0140713
data:
  {"annotated_genes":["SJAG_02906","SJAG_00259","SJAG_04547","SJAG_03905","SJAG_00925","SJAG_04692","SJAG_04257","SJAG_02198","SJAG_02348","SJAG_02416","SJAG_02035","SJAG_01005","SJAG_04561","SJAG_02698","SJAG_04758","SJAG_02439","SJAG_00170","SJAG_03128","SJAG_02571","SJAG_02314","SJAG_00914","SJAG_03366","SJAG_00942","SJAG_04670","SJAG_04272","SJAG_04038","SJAG_03867","SJAG_00913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88574,89825,95079,102697,109465,110978],"is_not":false,"summary":null,"term":"GO:0140713"},{"annotations":[87731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[103353,94372,96214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[112889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[97925,111074,113412,116716,107903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[108586,112609,114351,92140,117778,107533,95209,94587,110024,114890,94832,108581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome. The histone can be newly synthesized or result from nucleosome disassembly (either spontaneously, or by a histone chaperone).","definition_xrefs":["PMID:26459557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_01005":null,"SJAG_02035":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03366":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04547":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140597","GO:0140104","GO:0003674"],"is_obsolete":false,"name":"histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822185"],"synonyms":[{"name":"histone carrier activity","type":"exact"},{"name":"nucleosome remodeling activity","type":"related"}],"termid":"GO:0140713","terms_by_termid":{"GO:0000510":null,"GO:0000511":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: FYPO:0004628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of premeiotic DNA replication","synonyms":[{"name":"delayed premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0004628"}


id: MONDO:0005757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic granulomatous inflammation involving the deep dermis and the subcutaneous tissues. It is caused by fungi and actinomycetes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomycosis","termid":"MONDO:0002040"},{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eumycotic mycetoma","secondary_identifiers":["NCIT:C85505","SCTID:410038006","ICD9:117.4","ICD10CM:B47","MESH:D008271","SCTID:410039003","UMLS:C2350621","MEDGEN:390045","DOID:13078","EFO:0007265"],"synonyms":[{"name":"Madura foot","type":"broad"},{"name":"Maduromycosis, mycotic","type":"exact"},{"name":"eumycetoma","type":"exact"},{"name":"maduromycosis","type":"exact"},{"name":"mycotic mycetoma","type":"exact"}],"termid":"MONDO:0005757","xrefs":{"Monarch":{"xref_id":"0005757"}}}


id: PBO:0078634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 4","termid":"PBO:0078634"}


id: MONDO:0013086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma, susceptibility to, 6","secondary_identifiers":["UMLS:C2751678","OMIM:613017","MEDGEN:414440"],"synonyms":[{"name":"NBLST6","type":"exact"},{"name":"neuroblastoma, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0013086","xrefs":{"Monarch":{"xref_id":"0013086"}}}


id: GO:1900290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:1900288"},{"relation_name":"positively_regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"activation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole breakdown","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole catabolism","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole reduction","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"up regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"up-regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"upregulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900290"}


id: GO:0047399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 6-(D-glucose-1-phospho)-D-mannosylglycoprotein = D-mannosylglycoprotein + D-glucose-alpha-1-phosphate.","definition_xrefs":["MetaCyc:3.1.4.51-RXN","EC:3.1.4.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"glucose-1-phospho-D-mannosylglycoprotein phosphodiesterase activity","secondary_identifiers":["RHEA:18045"],"synonyms":[{"name":"6-(D-glucose-1-phospho)-D-mannosylglycoprotein glucose-1-phosphohydrolase activity","type":"related"},{"name":"alpha-glucose-1-phosphate phosphodiesterase activity","type":"related"}],"termid":"GO:0047399"}


id: PBO:0061533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE4 homolog A, SMC5-SMC6 complex component","termid":"PBO:0061533"}


id: MONDO:0007730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytic dermatoarthritis","secondary_identifiers":["UMLS:C1840551","OMIM:142730","MESH:C564183","MEDGEN:327131"],"synonyms":[{"name":"histiocytic dermatoarthritis","type":"exact"}],"termid":"MONDO:0007730","xrefs":{"Monarch":{"xref_id":"0007730"}}}


id: FYPO:0004986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur during the meiotic cell cycle. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"abolished transcription during meiotic cell cycle","synonyms":[{"name":"abolished meiotic cell cycle gene expression","type":"related"},{"name":"transcription abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004986"}


id: FYPO:0000886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000886"}


id: GO:0098777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein secretion through the outer membrane via the mechanism used for the secretion of curli subunits.","definition_xrefs":["PMID:24080089","PMID:19299134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"protein secretion by the type VIII secretion system","synonyms":[{"name":"T8SS","type":"exact"}],"termid":"GO:0098777"}


id: PBO:0053441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 387","termid":"PBO:0053441"}


id: FYPO:0009080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of calcofluor and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of calcofluor and sodium dodecyl sulfate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to calcofluor and sodium dodecyl sulfate","synonyms":[{"name":"hypersensitive to calcofluor and SDS","type":"exact"},{"name":"hypersensitive to calcofluor and sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to calcofluor and SDS","type":"exact"},{"name":"sensitive to calcofluor and SDS during vegetative growth","type":"exact"},{"name":"sensitive to calcofluor and SDS in combination","type":"exact"},{"name":"sensitive to calcofluor and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to calcofluor and sodium dodecyl sulfate in combination","type":"exact"}],"termid":"FYPO:0009080"}


id: MONDO:0018334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic hiccup is a rare movement disorder characterized by involuntary spasmodic contractions of the inspiratory muscles synchronized with larynx closure lasting for more than 48 hours.","definition_xrefs":["Orphanet:396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic hiccup","secondary_identifiers":["MEDGEN:900733","SCTID:716771000","UMLS:C0744898","GARD:6657","NORD:1242","HP:0100247","icd11.foundation:1300687612"],"synonyms":[{"name":"Hiccups, Chronic","type":"exact"},{"name":"Hiccups, intractable","type":"related"},{"name":"chronic hiccups","type":"related"},{"name":"intractable hiccups","type":"related"},{"name":"intractable singultus","type":"related"},{"name":"persistent hiccups","type":"related"}],"termid":"MONDO:0018334","xrefs":{"Monarch":{"xref_id":"0018334"}}}


id: PBO:0082893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase inhibitor; activated by environmental stress; interacts with and inhibits the Cdc28p/Cln2p, G1/S phase cyclin-dependent kinase complex but not S-phase, or M-phase complexes; overexpression blocks cells in G1 phase and stabilizes the Cdc28p inhibitor Sic1p, while disruption accelerates the G1/S phase transition; phosphorylated during S phase in a Cdc28p-dependent manner; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus","termid":"PBO:0082893"}


id: PBO:0039114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 2-HS glycoprotein","termid":"PBO:0039114"}


id: MONDO:0008758
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86804],"is_not":false,"summary":null,"term":"MONDO:0008758"}]},"cv_name":"mondo","definition":"A cerebrohepatopathy and a rare and severe form of mitochondrial DNA (mtDNA) depletion syndrome characterized by the triad of progressive developmental regression, intractable seizures, and hepatic failure.","definition_xrefs":["Orphanet:726"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome, hepatocerebral form","termid":"MONDO:0100512"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 4a","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C35257","UMLS:C0205710","DOID:0080122","MedDRA:10062943","NORD:752","ICD9:330.8","GARD:5783","MEDGEN:60012","DOID:1442","SCTID:20415001","OMIM:203700"],"synonyms":[{"name":"AHD","type":"exact"},{"name":"AHS","type":"exact"},{"name":"Alper syndrome","type":"exact"},{"name":"Alper's disease","type":"exact"},{"name":"Alper's syndrome","type":"exact"},{"name":"Alpers Disease","type":"exact"},{"name":"Alpers Huttenlocher disease","type":"exact"},{"name":"Alpers Huttenlocher syndrome","type":"exact"},{"name":"Alpers diffuse Degeneration of cerebral Gray matter with hepatic cirrhosis","type":"related"},{"name":"Alpers diffuse Degeneration of cerebral Grey matter with hepatic cirrhosis","type":"related"},{"name":"Alpers disease","type":"exact"},{"name":"Alpers progressive infantile poliodystrophy","type":"exact"},{"name":"Alpers progressive sclerosing poliodystrophy","type":"exact"},{"name":"Alpers syndrome","type":"exact"},{"name":"Alpers' disease or gray-matter degeneration","type":"exact"},{"name":"Alpers-Huttenlocher","type":"exact"},{"name":"Alpers-Huttenlocher syndrome","type":"exact"},{"name":"MTDPS4A","type":"related"},{"name":"PNDC","type":"related"},{"name":"Poliodystrophia cerebri progressiva","type":"related"},{"name":"diffuse cerebral degeneration in infancy","type":"related"},{"name":"infantile poliodystrophy","type":"related"},{"name":"mitochondrial DNA depletion syndrome 4A","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 4A (Alpers type)","type":"related"},{"name":"mitochondrial DNA depletion syndrome type 4a","type":"exact"},{"name":"neuronal Degeneration of childhood with liver disease, progressive","type":"related"},{"name":"progressive cerebral poliodystrophy","type":"related"},{"name":"progressive neuronal degeneration of childhood with liver disease","type":"exact"},{"name":"progressive sclerosing poliodystrophy","type":"exact"}],"termid":"MONDO:0008758","terms_by_termid":{"MONDO:0008758":null},"xrefs":{"Monarch":{"xref_id":"0008758"}}}


id: PBO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 12","termid":"PBO:0048091"}


id: PBO:0029575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_DEM","termid":"PBO:0029575"}


id: MOD:01640
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine removal","termid":"MOD:01640"}


id: PBO:0088323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat subunit Vps8","termid":"PBO:0088323"}


id: PATO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000197 transfer_arousal (obsolete PATO:0000197)","termid":"PATO:0000197"}


id: PBO:0071063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 65","termid":"PBO:0071063"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: GO:0023002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Migration of the nuclei of the two-nucleate embryo sac to opposite poles of the cell.","definition_xrefs":["GOC:mtg_plant","ISBN:047186840X","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo sac nuclear migration","termid":"GO:0009562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nuclear migration to embryo sac poles","synonyms":[{"name":"nuclear migration to female gametophyte poles","type":"exact"},{"name":"nuclear migration to megagametophyte poles","type":"exact"},{"name":"nucleus migration to embryo sac poles","type":"exact"},{"name":"nucleus migration to female gametophyte poles","type":"exact"},{"name":"nucleus migration to megagametophyte poles","type":"exact"}],"termid":"GO:0023002"}


id: FYPO:0000680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A developmental process phenotype in which ascus development is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ascus development","termid":"FYPO:0000680"}


id: PBO:0067485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 619, pseudogene","termid":"PBO:0067485"}


id: PBO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 125 pseudogene","termid":"PBO:0070200"}


id: GO:0036022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a limb joint are generated and organized. A limb joint is a flexible region that separates the rigid sections of a limb to allow movement in a controlled manner.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb joint morphogenesis","synonyms":[{"name":"knee morphogenesis","type":"narrow"},{"name":"leg joint morphogenesis","type":"narrow"}],"termid":"GO:0036022"}


id: PBO:0086438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative K+/H+ antiporter; involved in intracellular cation homeostasis; promotes copper binding to Fet3p multicopper oxidase; localized to Golgi vesicles and detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086438"}


id: GO:0019608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:nic","MetaCyc:P181-PWY"],"synonyms":[{"name":"nicotine breakdown","type":"exact"},{"name":"nicotine catabolism","type":"exact"},{"name":"nicotine degradation","type":"exact"}],"termid":"GO:0019608"}


id: PBO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.3.2","termid":"PBO:0004968"}


id: MONDO:0004271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tubular type adenoma of the breast in which, during pregnancy and lactation, the epithelial cells show extensive secretory changes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenoma","termid":"MONDO:0002058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy adenoma","secondary_identifiers":["MEDGEN:226830","DOID:7539","ICDO:8204/0","UMLS:C1266023","NCIT:C9473"],"synonyms":[{"name":"Lactating adenoma","type":"exact"},{"name":"Lactating adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004271","xrefs":{"Monarch":{"xref_id":"0004271"}}}


id: MONDO:0009626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian disease characterized by the presence of microcephaly and intracranial calcifications at birth accompanied by neurological delay, seizures and a clinical course similar to that seen in patients after intrauterine infection with Toxoplasma gondii, Rubella, Cytomegalovirus, Herpes simplex (so-called TORCH syndrome), or other agents, despite repeated tests revealing the absence of any known infectious agent.","definition_xrefs":["Orphanet:1229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pseudo-TORCH syndrome","secondary_identifiers":["UMLS:C3489725","GARD:12426","OMIMPS:251290","DOID:0050656","MEDGEN:483678","SCTID:722390006"],"synonyms":[{"name":"BLC-PMG","type":"exact"},{"name":"BLCPMG","type":"related"},{"name":"Baraitser Brett Piesowicz syndrome","type":"related"},{"name":"Baraitser-Brett-Piesowicz syndrome","type":"exact"},{"name":"Baraitser-Reardon syndrome","type":"exact"},{"name":"band-like calcification with simplified gyration and polymicrogyria","type":"exact"},{"name":"bilateral band-like calcification with polymicrogyria","type":"exact"},{"name":"congenital intrauterine infection-like syndrome","type":"related"},{"name":"microcephaly - intracranial calcification - intellectual disability","type":"related"},{"name":"microcephaly intracranial calcification","type":"related"},{"name":"microcephaly-intracranial calcification-intellectual disability syndrome","type":"exact"},{"name":"pseudo-TORCH syndrome","type":"exact"}],"termid":"MONDO:0009626","xrefs":{"Monarch":{"xref_id":"0009626"}}}


id: PBO:0039331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate lipoxygenase 3 pseudogene 1","termid":"PBO:0039331"}


id: PBO:0057654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1246","termid":"PBO:0057654"}


id: PBO:0077382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 123","termid":"PBO:0077382"}


id: PBO:0088196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor involved in arginine-responsive genes; Zn(2)-Cys(6) binuclear cluster domain type; involved in the regulation of arginine-responsive genes; acts with Arg80p and Arg82p","termid":"PBO:0088196"}


id: GO:0050238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + acceptor = isopyridoxal + reduced acceptor.","definition_xrefs":["EC:1.1.99.9","MetaCyc:PYRIDOXINE-5-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyridoxine 5-dehydrogenase activity","secondary_identifiers":["RHEA:14497"],"synonyms":[{"name":"pyridoxal-5-dehydrogenase activity","type":"related"},{"name":"pyridoxin 5-dehydrogenase activity","type":"related"},{"name":"pyridoxine 5'-dehydrogenase activity","type":"related"},{"name":"pyridoxine:(acceptor) 5-oxidoreductase activity","type":"related"},{"name":"pyridoxine:acceptor 5-oxidoreductase activity","type":"related"},{"name":"pyridoxol 5-dehydrogenase activity","type":"related"}],"termid":"GO:0050238"}


id: GO:0140712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22510459","PMID:22579286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Frizzled Nuclear Import pathway","termid":"GO:0140710"},{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"negatively_regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"negative regulation of FNI","type":"broad"},{"name":"negative regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140712"}


id: MONDO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bursitis that involves the olecranon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enthesopathy","termid":"MONDO:0002183"},{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olecranon bursitis","secondary_identifiers":["ICD9:726.33","ICD10CM:M70.2","UMLS:C0263962","DOID:12581","MEDGEN:538225","SCTID:425940002"],"synonyms":[{"name":"Miners' elbow","type":"exact"},{"name":"bursitis of elbow","type":"exact"},{"name":"bursitis of elbow region","type":"exact"},{"name":"bursitis of olecranon","type":"exact"},{"name":"capped elbow","type":"exact"},{"name":"elbow bursitis","type":"exact"},{"name":"elbow bursitis (& olecranon)","type":"exact"},{"name":"miner's elbow","type":"exact"},{"name":"olecranon bursitis","type":"exact"},{"name":"shoe boil","type":"exact"}],"termid":"MONDO:0001557","xrefs":{"Monarch":{"xref_id":"0001557"}}}


id: FYPO:0004759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of premeiotic DNA replication is abnormal, resulting in one or more rounds of rereplication of the entire genome.","definition_xrefs":["PMID:10388806","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of premeiotic DNA replication initiation","termid":"FYPO:0004758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of premeiotic DNA replication initiation resulting in complete rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication during meiotic cell cycle","type":"related"},{"name":"abnormal negative regulation of initiation of premeiotic DNA replication, resulting in complete rereplication","type":"exact"},{"name":"abnormal negative regulation of premeiotic DNA replication initiation resulting in complete re-replication","type":"exact"},{"name":"complete premeiotic DNA re-replication","type":"related"},{"name":"complete premeiotic DNA rereplication","type":"related"}],"termid":"FYPO:0004759"}


id: PR:Q10478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting and assembly machinery component 50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12815:SF6","OMA:SCHPO01861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM50-like protein SPAC17C9.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.06","secondary_identifiers":["UniProtKB:Q10478"],"synonyms":[{"name":"Spom972h-SAMM50","type":"exact"}],"termid":"PR:Q10478"}


id: MONDO:0850347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcomatoid transitional cell carcinoma that is located in the bladder.","definition_xrefs":["DOID:0080901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcomatoid transitional cell carcinoma","termid":"MONDO:0002837"},{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder sarcomatoid transitional cell carcinoma","termid":"MONDO:0850347","xrefs":{"Monarch":{"xref_id":"0850347"}}}


id: GO:0036319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the mating-type peptide pheromone M-factor and transmitting the signal across the membrane to initiate a change in cell activity. M-factor is a nine-membered oligopeptide that consists of tyrosyl, threonyl, prolyl, lysyl, valyl, prolyl, tyrosyl, methionyl and methyl S-farnesylcysteinate residues joined in sequence, and is a peptide pheromone released by Schizosaccharomyces pombe cells of the cellular mating type Minus.","definition_xrefs":["GOC:al","PMID:7941744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating-type factor pheromone receptor activity","termid":"GO:0004932"},{"relation_name":"is_a","term_name":"peptide pheromone receptor activity","termid":"GO:0036318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"mating-type M-factor pheromone receptor activity","synonyms":[{"name":"M-factor mating pheromone receptor activity","type":"exact"},{"name":"M-factor receptor activity","type":"exact"}],"termid":"GO:0036319"}


id: GO:0061221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric mesenchymal tissue are generated and organized. Mesonephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchyme morphogenesis","termid":"GO:0061221"}


id: PR:Q9UUD1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An sre1-type sterol regulatory element-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:Q9UUD1","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sre1-type sterol regulatory element-binding protein 1","termid":"PR:000028989"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.09","synonyms":[{"name":"Spom972h-sre1","type":"exact"}],"termid":"PR:Q9UUD1"}


id: PBO:0079979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 17","termid":"PBO:0079979"}


id: GO:0099158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport or maintenance of location of a postsynaptic recycling endosome within the postsynapse.","definition_xrefs":["GOC:dos","PMID:20098723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of recycling endosome localization within postsynapse","termid":"GO:0099158"}


id: PBO:0066109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 1","termid":"PBO:0066109"}


id: MONDO:1012953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurodegenerative disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953","xrefs":{"Monarch":{"xref_id":"1012953"}}}


id: PBO:0002798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal transforming acidic coiled-coil (TACC) protein ortholog Alp7","termid":"PBO:0002798"}


id: MONDO:0018989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent acute pancreatitis (RAP) is characterized by repeated attacks of acute pancreatitis (AP), which is defined as an acute inflammatory process of the pancreas with variable involvement of other regional tissues or remote organ systems.","definition_xrefs":["Orphanet:64740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"recurrent acute pancreatitis","secondary_identifiers":["MedDRA:10033657","MEDGEN:489943","NCIT:C184324","SCTID:197458008","UMLS:C0267937","icd11.foundation:300900170"],"termid":"MONDO:0018989","xrefs":{"Monarch":{"xref_id":"0018989"}}}


id: PBO:0053881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1160","termid":"PBO:0053881"}


id: PBO:0069559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 831, pseudogene","termid":"PBO:0069559"}


id: PBO:0030200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cytochalasin_B","termid":"PBO:0030200"}


id: MONDO:0014516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microcephaly and chorioretinopathy in which the cause of the disease is a mutation in the PLK4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly and chorioretinopathy","termid":"MONDO:0000181"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly and chorioretinopathy 2","secondary_identifiers":["MEDGEN:863825","OMIM:616171","UMLS:C4015388","DOID:0080106"],"synonyms":[{"name":"MCCRP2","type":"related"},{"name":"PLK4 microcephaly and chorioretinopathy","type":"exact"},{"name":"microcephaly and chorioretinopathy caused by mutation in PLK4","type":"exact"},{"name":"microcephaly and chorioretinopathy type 2","type":"exact"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, 2","type":"related"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, type 2","type":"exact"}],"termid":"MONDO:0014516","xrefs":{"Monarch":{"xref_id":"0014516"}}}


id: MONDO:0022034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the Lentivirus genus. They are multi-organ diseases characterized by long incubation periods and persistent infection.","definition_xrefs":["MESH:D016180"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine carcinosarcoma","termid":"MONDO:0006485"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lentivirus infection","secondary_identifiers":["UMLS:C0079680","EFO:1001357","MEDGEN:38233"],"synonyms":[{"name":"Disease caused by Lentivirus","type":"related"},{"name":"Disease due to Lentivirus","type":"related"},{"name":"Infection, Lentivirus","type":"related"},{"name":"Infections, Lentivirus","type":"related"},{"name":"Lentivirus Infection","type":"related"},{"name":"Lentivirus Infections","type":"related"}],"termid":"MONDO:0022034","xrefs":{"Monarch":{"xref_id":"0022034"}}}


id: FYPO:0006826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-fluorophenylalanine. Cells stop growing (and may die) at a concentration of 4-fluorophenylalanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to 4-fluorophenylalanine","synonyms":[{"name":"hypersensitive to 4-fluorophenylalanine","type":"exact"},{"name":"sensitive to 4-fluorophenylalanine during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-fluorophenylalanine during vegetative growth","type":"exact"},{"name":"sensitive to p-fluoro-phenylalanine","type":"exact"},{"name":"sensitive to p-fluorophenylalanine","type":"exact"}],"termid":"FYPO:0006826"}


id: MONDO:0009082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High myopia-sensorineural deafness syndrome is a rare genetic disease characterized by high myopia, typically ranging from -6.0 to -11.0 diopters, and moderate to profound, bilateral, progressive sensorineural hearing loss with prelingual-onset. Affected individuals do not present other systemic, ocular or connective tissue manifestations.","definition_xrefs":["Orphanet:363396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high myopia-sensorineural deafness syndrome","secondary_identifiers":["UMLS:C3806275","DOID:0111628","MEDGEN:812605","OMIM:221200","SCTID:720506002","GARD:12844"],"synonyms":[{"name":"DFNMYP","type":"related"},{"name":"deafness and myopia","type":"related"},{"name":"deafness and myopia syndrome","type":"related"},{"name":"high myopia-sensorineural deafness syndrome","type":"exact"}],"termid":"MONDO:0009082","xrefs":{"Monarch":{"xref_id":"0009082"}}}


id: GO:0102790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 5-O-beta-D-glucoside + UDP-alpha-D-glucose = cyanin betaine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 5,3-O-glycosyltransferase activity (obsolete GO:0102790)","termid":"GO:0102790"}


id: PBO:0017476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-depends_on","termid":"PBO:0017476"}


id: PBO:0091326
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.1424709delA","termid":"PBO:0091326"}


id: GO:0016934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005237"},{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"extracellularly glycine-gated ion channel activity","termid":"GO:0016933"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"extracellularly glycine-gated chloride channel activity","secondary_identifiers":["Reactome:R-HSA-975389","GO:0004891"],"synonyms":[{"name":"extracellular-glycine-gated chloride channel activity","type":"exact"},{"name":"glycine receptor","type":"broad"},{"name":"glycine-inhibited chloride channel activity","type":"related"}],"termid":"GO:0016934"}


id: MONDO:0008415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Scholte syndrome (obsolete MONDO:0008415)","secondary_identifiers":["OMIM:181515"],"termid":"MONDO:0008415","xrefs":{"Monarch":{"xref_id":"0008415"}}}


id: GO:0043196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Non-terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"varicosity","termid":"GO:0043196"}


id: GO:0034705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which potassium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"potassium channel complex","termid":"GO:0034705"}


id: PBO:0058779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7113","termid":"PBO:0058779"}


id: MONDO:0012634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial dysplasia - osteopenia syndrome","secondary_identifiers":["MEDGEN:370148","GARD:17422","MESH:C566988","OMIM:611174","Orphanet:314555","UMLS:C1970027"],"synonyms":[{"name":"HAMAMY syndrome","type":"related"},{"name":"HMMS","type":"related"},{"name":"Hamamy syndrome","type":"exact"},{"name":"hypertelorism, Severe, with midface prominence, myopia, intellectual disability, and bone fragility","type":"related"},{"name":"hypertelorism, Severe, with midface prominence, myopia, mental retardation, and bone fragility","type":"related"}],"termid":"MONDO:0012634","xrefs":{"Monarch":{"xref_id":"0012634"}}}


id: MONDO:0001273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal dilation of the colon not due to obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacolon","secondary_identifiers":["UMLS:C0025160","ICD9:564.7","MEDGEN:6285","SCTID:33995003","icd11.foundation:1742998538","MESH:D008531","DOID:11372","NCIT:C34810"],"synonyms":[{"name":"dilatation of colon","type":"exact"}],"termid":"MONDO:0001273","xrefs":{"Monarch":{"xref_id":"0001273"}}}


id: PATO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a sepal,","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepal-like","termid":"PATO:0002459"}


id: PBO:0073461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein B","termid":"PBO:0073461"}


id: PBO:0074427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 27","termid":"PBO:0074427"}


id: GO:0031237
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a plasma membrane consisting of gene products and protein complexes that penetrate the periplasmic side of the plasma membrane only, either directly or via some covalently attached hydrophobic anchor.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of periplasmic side of plasma membrane (obsolete GO:0031237)","synonyms":[{"name":"intrinsic to external leaflet of plasma membrane, in periplasmic space","type":"exact"},{"name":"intrinsic to periplasmic side of plasma membrane","type":"exact"}],"termid":"GO:0031237"}


id: PBO:0083981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamate decarboxylase; converts glutamate into gamma-aminobutyric acid (GABA) during glutamate catabolism; involved in response to oxidative stress","termid":"PBO:0083981"}


id: PBO:0091919
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Frataxin Homolog","termid":"PBO:0091919"}


id: GO:0035657
data:
  {"annotated_genes":["SJAG_03949","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78651,95978],"is_not":false,"summary":null,"term":"GO:0035657"}]},"cv_name":"cellular_component","definition":"A protein complex required for the methylation of a glutamine (Gln) residue in the protein release factor eRF1. In S. cerevisiae, this complex consists of at least Trm112p and Mtq2p.","definition_xrefs":["GOC:rb","PMID:17008308","PMID:20400505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03949":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"eRF1 methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"eRF1 MTase complex","type":"exact"}],"termid":"GO:0035657","terms_by_termid":{"GO:0035657":null}}


id: PBO:0116319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase F(o) subunit H, Atp14","termid":"PBO:0116319"}


id: PR:Q09779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00263","PANTHER:PTHR21597:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.14","secondary_identifiers":["UniProtKB:Q09779"],"synonyms":[{"name":"Spom972h-THOC2","type":"exact"}],"termid":"PR:Q09779"}


id: FYECO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes a rich growth medium, i.e. one in which not all constituent substances and their concentrations are specified, and some are present in excess.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping rich medium","termid":"FYECO:0000080"}


id: MONDO:0014741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"DeSanto-Shinawi syndrome","termid":"MONDO:0018760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeSanto-Shinawi syndrome due to WAC point mutation","secondary_identifiers":["GARD:17839","Orphanet:466950","OMIM:616708","UMLS:C5681129","MEDGEN:1841517"],"synonyms":[{"name":"DESANTO-SHINAWI syndrome","type":"broad"},{"name":"DESSH","type":"broad"},{"name":"Desanto-Shinawi syndrome","type":"broad"},{"name":"chromosome 10P12-p11 deletion syndrome","type":"related"},{"name":"developmental delay, behavioral abnormalities, Facial Dysmorphism, and ocular abnormalities","type":"related"},{"name":"developmental delay, behavioural abnormalities, Facial Dysmorphism, and ocular abnormalities","type":"related"},{"name":"facial dysmorphism-developmental delay-behavioral abnormalities syndrome due to WAC point mutation","type":"exact"}],"termid":"MONDO:0014741","xrefs":{"Monarch":{"xref_id":"0014741"}}}


id: PBO:0084097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Ria1p; essential protein involved in ribosome maturation; with Ria1p, promotes release of Tif6p from 60S ribosomal subunits in the cytoplasm so that they can assemble with 40S subunits to generate mature ribosomes; ortholog of the human protein (SBDS) responsible for autosomal recessive Shwachman-Bodian-Diamond Syndrome; highly conserved across archaea and eukaryotes","termid":"PBO:0084097"}


id: PBO:0074662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 50B","termid":"PBO:0074662"}


id: MONDO:1011054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, domestic cat","secondary_identifiers":["OMIA:000807-9685"],"termid":"MONDO:1011054","xrefs":{"Monarch":{"xref_id":"1011054"}}}


id: PBO:0086698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; possible Zap1p-regulated target gene induced by zinc deficiency; YJL132W is a non-essential gene","termid":"PBO:0086698"}


id: MONDO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic epidermal necrolysis","termid":"MONDO:0019810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Stevens-Johnson syndrome/toxic epidermal necrolysis overlap syndrome","secondary_identifiers":["GARD:22066","UMLS:C3661878","MEDGEN:783034","icd11.foundation:496418968","Orphanet:506784"],"synonyms":[{"name":"SJS/TEN overlap syndrome","type":"exact"},{"name":"Stevens-Johnson/TEN overlap syndrome","type":"exact"},{"name":"Stevens-Johnson/toxic epidermal necrolysis overlap syndrome","type":"exact"}],"termid":"MONDO:0044739","xrefs":{"Monarch":{"xref_id":"0044739"}}}


id: MONDO:0012072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial partial lipodystrophy, Kobberling type, is a very rare form of familial partial lipodystrophy (FPLD) of unknown etiology characterized by lipoatrophy that is confined to the limbs and a normal or increased fat distribution of the face, neck, and trunk. Arterial hypertension and diabetes have also been associated. Inheritance is thought to be autosomal dominant.","definition_xrefs":["Orphanet:79084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"familial partial lipodystrophy, Kobberling type","secondary_identifiers":["DOID:0070207","GARD:12598","MEDGEN:318591","OMIM:608600","UMLS:C1720859","SCTID:725035001"],"synonyms":[{"name":"FPLD1","type":"exact"},{"name":"familial partial lipodystrophy type 1","type":"exact"},{"name":"familial partial lipodystrophy type Köbberling","type":"related"},{"name":"familial partial lipodystrophy, Köbberling type","type":"related"},{"name":"lipodystrophy, familial partial, Kobberling type","type":"related"},{"name":"lipodystrophy, familial partial, type 1","type":"related"}],"termid":"MONDO:0012072","xrefs":{"Monarch":{"xref_id":"0012072"}}}


id: MONDO:1012847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal development of the telencephalon characterized by microcephaly and polymicrogyria that occurs in cats due to a mutation in the PEA15 gene.","definition_xrefs":["PMID:33290415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral dysgenesis, PEA15 related, domestic cat","secondary_identifiers":["OMIA:002303-9685"],"termid":"MONDO:1012847","xrefs":{"Monarch":{"xref_id":"1012847"}}}


id: MONDO:0015267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Feingold syndrome (FS), also known as oculo-digito-esophageal-duodenal (ODED) syndrome, is a rare inherited malformation syndrome characterized by microcephaly, short stature and numerous digital anomalies and is comprised of two subtypes: FS type 1 (FS1) and FS type 2 (FS2). FS1 is by far the most common form while FS2 has only been reported in 3 patients and has the same clinical characteristics as FS1, apart from the absence of gastrointestinal atresia and short palpebral fissures.","definition_xrefs":["Orphanet:1305"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Feingold syndrome","secondary_identifiers":["OMIMPS:164280","DOID:0060464","GARD:8407","UMLS:C0796068","NCIT:C74987","MEDGEN:163209"],"synonyms":[{"name":"Brunner-Winter syndrome","type":"exact"},{"name":"FGLDS","type":"exact"},{"name":"FS","type":"exact"},{"name":"MMT","type":"exact"},{"name":"MODED syndrome","type":"exact"},{"name":"ODED syndrome","type":"exact"},{"name":"digital anomalies with short palpebral fissures and atresia of esophagus or duodenum","type":"exact"},{"name":"digital anomalies with short palpebral fissures and atresia of esophagus, or duodenum","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of oesophagus or duodenum","type":"exact"},{"name":"microcephaly-digital anomalies-normal intelligence syndrome","type":"exact"},{"name":"microcephaly-intellectual disability-tracheoesophageal fistula syndrome","type":"exact"},{"name":"microcephaly-oculo-digito-esophageal-duodenal syndrome","type":"exact"},{"name":"microcephaly-oculo-digito-esophageal-duodenal syndrome syndrome","type":"exact"},{"name":"oculo-digito-esophageal-duodenal syndrome","type":"exact"}],"termid":"MONDO:0015267","xrefs":{"Monarch":{"xref_id":"0015267"}}}


id: GO:0120158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of collagen catabolic process","termid":"GO:0010710"},{"relation_name":"is_a","term_name":"positive regulation of collagen metabolic process","termid":"GO:0010714"},{"relation_name":"positively_regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen catabolic process","synonyms":[{"name":"activation of collagen catabolic process","type":"narrow"},{"name":"positive regulation of collagen breakdown","type":"exact"},{"name":"positive regulation of collagen catabolism","type":"exact"},{"name":"positive regulation of collagen degradation","type":"exact"},{"name":"up regulation of collagen catabolic process","type":"exact"},{"name":"up-regulation of collagen catabolic process","type":"exact"},{"name":"upregulation of collagen catabolic process","type":"exact"}],"termid":"GO:0120158"}


id: MONDO:0957812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 112","secondary_identifiers":["OMIM:620537","UMLS:C5882700","MEDGEN:1845523"],"termid":"MONDO:0957812","xrefs":{"Monarch":{"xref_id":"0957812"}}}


id: PBO:0050277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box containing 4","termid":"PBO:0050277"}


id: GO:0006059
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hexitol metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"hexitol metabolism","type":"exact"},{"name":"sugar alcohol (hexitol) metabolic process","type":"exact"},{"name":"sugar alcohol (hexitol) metabolism","type":"exact"}],"termid":"GO:0006059","terms_by_termid":{"GO:0006062":null}}


id: PBO:0061039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA magnesium transporter 2","termid":"PBO:0061039"}


id: PBO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longest ORF in feature","termid":"PBO:0000232"}


id: PBO:0048880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member F, pseudogene","termid":"PBO:0048880"}


id: PBO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZF1 antisense RNA 1","termid":"PBO:0047519"}


id: PBO:0080913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 2","termid":"PBO:0080913"}


id: PBO:0045436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 4","termid":"PBO:0045436"}


id: GO:0031919
data:
  {"annotated_genes":["SJAG_03808","SJAG_03652","SJAG_02152","SJAG_02962"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89888,117281,89889,118559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[89890,117282,89891,118560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[89893,117283,89892,118561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"}]},"cv_name":"biological_process","definition":"The directed movement of any of the vitamin B6 compounds -- pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate -- into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vitamin B6 transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031919","terms_by_termid":{"GO:1903090":null,"GO:1903091":null,"GO:1903092":null}}


id: MONDO:0017548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humero-radio-ulnar synostosis","termid":"MONDO:0017983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humero-radio-ulnar synostosis, unilateral","secondary_identifiers":["icd11.foundation:322904301","Orphanet:295205"],"synonyms":[{"name":"humero-radio-ulnar fusion, unilateral","type":"exact"}],"termid":"MONDO:0017548","xrefs":{"Monarch":{"xref_id":"0017548"}}}


id: MONDO:0859231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly, neurodevelopmental delay, lymphoid hyperplasia, and persistent fetal hemoglobin","secondary_identifiers":["MEDGEN:1802903","OMIM:619769","UMLS:C5676928"],"termid":"MONDO:0859231","xrefs":{"Monarch":{"xref_id":"0859231"}}}


id: GO:1903769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in bone marrow.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:9241534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of cell proliferation in bone marrow","termid":"GO:0071863"},{"relation_name":"negatively_regulates","term_name":"cell proliferation in bone marrow","termid":"GO:0071838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation in bone marrow","synonyms":[{"name":"down regulation of bone marrow cell proliferation","type":"exact"},{"name":"down regulation of cell proliferation in bone marrow","type":"exact"},{"name":"down-regulation of bone marrow cell proliferation","type":"exact"},{"name":"down-regulation of cell proliferation in bone marrow","type":"exact"},{"name":"downregulation of bone marrow cell proliferation","type":"exact"},{"name":"downregulation of cell proliferation in bone marrow","type":"exact"},{"name":"inhibition of bone marrow cell proliferation","type":"narrow"},{"name":"inhibition of cell proliferation in bone marrow","type":"narrow"},{"name":"negative regulation of bone marrow cell proliferation","type":"exact"}],"termid":"GO:1903769"}


id: PBO:0074766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 2","termid":"PBO:0074766"}


id: GO:0000146
data:
  {"annotated_genes":["SJAG_04001","SJAG_02431","SJAG_03011","SJAG_03703","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69631,70738,74023,76374,79308],"is_not":false,"summary":null,"term":"GO:0000146"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microfilament, driven by ATP hydrolysis.","definition_xrefs":["PMID:29716949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02431":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003774"],"is_obsolete":false,"name":"microfilament motor activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9023171","EC:5.6.1.8","GO:0030898","Reactome:R-HSA-2316352","Reactome:R-HSA-432237"],"synonyms":[{"name":"actin filament motor activity","type":"exact"},{"name":"actin-activated ATPase activity","type":"exact"},{"name":"actin-dependent ATPase activity","type":"exact"},{"name":"actin-filament motor activity","type":"exact"},{"name":"muscle motor activity","type":"narrow"},{"name":"myosin ATPase activity","type":"related"}],"termid":"GO:0000146","terms_by_termid":{"GO:0000146":null}}


id: GO:0010662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell apoptotic process","termid":"GO:0010660"},{"relation_name":"regulates","term_name":"striated muscle cell apoptotic process","termid":"GO:0010658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle cell apoptotic process","synonyms":[{"name":"regulation of striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010662"}


id: PBO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.32","termid":"PBO:0001490"}


id: GO:0019508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,5-dihydroxypyridine to form fumarate. 2,5-dihydroxypyridine is dioxygenated to give maleamate and formate; the maleamate from this reaction is then converted to maleate, which is then isomerized to fumurate.","definition_xrefs":["MetaCyc:PWY-722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fumarate metabolic process","termid":"GO:0006106"},{"relation_name":"is_a","term_name":"2,5-dihydroxypyridine catabolic process","termid":"GO:0051166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2,5-dihydroxypyridine catabolic process to fumarate","synonyms":[{"name":"2,5-dihydroxypyridine breakdown to fumarate","type":"exact"},{"name":"2,5-dihydroxypyridine degradation to fumarate","type":"exact"},{"name":"2,5-dihydroxypyridine utilization","type":"related"},{"name":"maleamate pathway","type":"exact"},{"name":"pyridine-2,5-diol catabolic process to fumarate","type":"exact"}],"termid":"GO:0019508"}


id: GO:1900078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"positively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to insulin stimulus","synonyms":[{"name":"activation of cellular response to insulin stimulus","type":"narrow"},{"name":"up regulation of cellular response to insulin stimulus","type":"exact"},{"name":"up-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"upregulation of cellular response to insulin stimulus","type":"exact"}],"termid":"GO:1900078"}


id: GO:0018121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + L-asparagine = nicotinamide + N2-(ADP-D-ribosyl)-L-asparagine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)-asparagine ADP-ribosyltransferase activity (obsolete GO:0018121)","termid":"GO:0018121"}


id: PBO:0064999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 6","termid":"PBO:0064999"}


id: PBO:0049357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 15","termid":"PBO:0049357"}


id: GO:0048853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forebrain are generated and organized. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).","definition_xrefs":["GOC:cvs","GOC:jid","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"},{"relation_name":"part_of","term_name":"brain morphogenesis","termid":"GO:0048854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain morphogenesis","synonyms":[{"name":"prosencephalon morphogenesis","type":"exact"}],"termid":"GO:0048853"}


id: PBO:0028239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_meiotic_anaphase_II","termid":"PBO:0028239"}


id: PBO:0116308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase","termid":"PBO:0116308"}


id: GO:0019894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with kinesin, a member of a superfamily of microtubule-based motor proteins that perform force-generating tasks such as organelle transport and chromosome segregation.","definition_xrefs":["GOC:curators","PMID:8606779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"kinesin binding","termid":"GO:0019894"}


id: FYPO:0000992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3-phosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular phosphatidylinositol-3-phosphate level","synonyms":[{"name":"abnormal cellular phosphatidylinositol-3-phosphate level","type":"exact"},{"name":"altered PI-3-P accumulation","type":"related"},{"name":"altered cellular PI(3)P level","type":"exact"},{"name":"altered cellular PI-3-P level","type":"exact"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during mitotic cell cycle","type":"related"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0000992"}


id: PBO:0087017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide reductase inhibitor; intrinsically disordered protein that binds to and inhibits Rnr2p; involved in the Mec1p-mediated checkpoint pathway; transcription is induced by genotoxic stress and by activation of the Rad53p pathway; protein abundance increases in response to DNA replication stress","termid":"PBO:0087017"}


id: PBO:0039438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and EF-hand domain containing 1","termid":"PBO:0039438"}


id: GO:0046309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 1,3-dichloro-2-propanol (DCP), a halohydrin suspected of being carcinogenic, mutagenic and genotoxic.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3-dichloro-2-propanol biosynthetic process (obsolete GO:0046309)","synonyms":[{"name":"1,3-dichloro-2-propanol anabolism","type":"exact"},{"name":"1,3-dichloro-2-propanol biosynthesis","type":"exact"},{"name":"1,3-dichloro-2-propanol formation","type":"exact"},{"name":"1,3-dichloro-2-propanol synthesis","type":"exact"}],"termid":"GO:0046309"}


id: PBO:0042609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 9","termid":"PBO:0042609"}


id: GO:0120003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A narrow rim of non-thickened membrane in between urothelial plaques in apical plasma membrane.","definition_xrefs":["PMID:21468280","GOC:krc","PMID:21887288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"hinge region between urothelial plaques of apical plasma membrane","termid":"GO:0120003"}


id: PBO:0017744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein, unknown role","termid":"PBO:0017744"}


id: GO:0071307
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin K stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin K","termid":"GO:0032571"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin K","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071307","terms_by_termid":{"GO:0036245":null}}


id: PBO:0005513
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.5","termid":"PBO:0005513"}


id: GO:0071502
data:
  {"annotated_genes":["SJAG_02381"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90566],"is_not":false,"summary":null,"term":"GO:0071502"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to temperature stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to thermal stimulus","type":"exact"}],"termid":"GO:0071502","terms_by_termid":{"GO:0071502":null}}


id: PBO:0004892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Rsm25 (predicted)","termid":"PBO:0004892"}


id: GO:1904244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["GOC:TermGenie","PMID:12771515","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of pancreatic trypsinogen secretion","termid":"GO:1904242"},{"relation_name":"positively_regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"activation of pancreatic trypsinogen release","type":"narrow"},{"name":"activation of pancreatic trypsinogen secretion","type":"narrow"},{"name":"positive regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"upregulation of pancreatic trypsinogen release","type":"exact"},{"name":"upregulation of pancreatic trypsinogen secretion","type":"exact"}],"termid":"GO:1904244"}


id: PBO:0066376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 3","termid":"PBO:0066376"}


id: GO:0070047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 4 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-4 complex","synonyms":[{"name":"SNARE complex (Stx4, Snap25, Vamp2)","type":"narrow"},{"name":"Stx4-Snap25-Vamp2 complex","type":"narrow"}],"termid":"GO:0070047"}


id: GO:0036159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal dynein inner arm, an inner arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:19944400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex assembly","termid":"GO:0070286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0065003","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"inner dynein arm assembly","synonyms":[{"name":"IDA assembly","type":"exact"}],"termid":"GO:0036159"}


id: PBO:0041380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5a receptor 1","termid":"PBO:0041380"}


id: PBO:0000644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex subunit Tfg3","termid":"PBO:0000644"}


id: PBO:0085511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S13 and bacterial S15","termid":"PBO:0085511"}


id: PR:Q9USN4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1529.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USN4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1529.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1529.01","synonyms":[{"name":"Spom972h-SPCC1529.01","type":"exact"}],"termid":"PR:Q9USN4"}


id: PBO:0055069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2485","termid":"PBO:0055069"}


id: FYPO:0005733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is increased during a cellular response to iron ion starvation.","definition_xrefs":["PomBase:mah","PMID:20435771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glutamate-ammonia ligase activity","termid":"FYPO:0002270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased glutamate-ammonia ligase activity during cellular response to iron ion starvation","synonyms":[{"name":"increased GS activity during cellular response to iron ion starvation","type":"exact"},{"name":"increased glutamate-ammonia ligase activity during iron ion starvation","type":"exact"},{"name":"increased glutamine synthetase activity during cellular response to iron ion starvation","type":"exact"},{"name":"increased glutamylhydroxamic synthetase activity during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0005733"}


id: PBO:0013821
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexadecameric","termid":"PBO:0013821"}


id: PBO:0052384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 25","termid":"PBO:0052384"}


id: MONDO:0003956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloarthropathy","termid":"MONDO:0005095"},{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Baastrup syndrome","secondary_identifiers":["DOID:6643","SCTID:82304009","MEDGEN:510482","UMLS:C0158248","ICD9:721.5"],"synonyms":[{"name":"Baastrup syndrome","type":"exact"},{"name":"Baastrup's syndrome","type":"exact"},{"name":"kissing spine","type":"exact"}],"termid":"MONDO:0003956","xrefs":{"Monarch":{"xref_id":"0003956"}}}


id: PBO:0108890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 3","termid":"PBO:0108890"}


id: PBO:0031885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome methytransferase involved in ribosome assembly Hpm1 (predicted)","termid":"PBO:0031885"}


id: GO:2000107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"negatively_regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte apoptotic process","synonyms":[{"name":"negative regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000107"}


id: PBO:0039472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18B","termid":"PBO:0039472"}


id: PBO:0079878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 1A","termid":"PBO:0079878"}


id: GO:0098997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral membrane with the host cell outer membrane during viral entry.","definition_xrefs":["GOC:dos","VZ:3941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"fusion of virus membrane with host outer membrane","synonyms":[{"name":"fusion of viral membrane with host outer membrane","type":"related"},{"name":"viral envelope fusion","type":"broad"},{"name":"viral envelope fusion with host outer membrane","type":"exact"},{"name":"viral penetration via membrane fusion","type":"broad"},{"name":"viral-cell fusion molecule activity","type":"related"}],"termid":"GO:0098997"}


id: PBO:0113483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomere-linked gene, silencing of which is strictly Sir2-dependent","termid":"PBO:0113483"}


id: PBO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vigtamin H transporter (predicted)","termid":"PBO:0002774"}


id: FYPO:0004206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snRNA or precursor level","termid":"FYPO:0005997"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased mature snRNA level","synonyms":[{"name":"increased mature small nuclear RNA level","type":"exact"},{"name":"increased mature snRNA accumulation","type":"related"},{"name":"increased mature snRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature snRNA level during vegetative growth","type":"exact"},{"name":"increased mature snRNA transcript level","type":"broad"},{"name":"increased snRNA level","type":"broad"}],"termid":"FYPO:0004206"}


id: GO:0010657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.","definition_xrefs":["GOC:tb","CL:0000187","GOC:mtg_apoptosis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell apoptotic process","synonyms":[{"name":"muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010657"}


id: PBO:0035904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_glycoprotein_degradation_during_vegetative_growth","termid":"PBO:0035904"}


id: PBO:0051410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-44","termid":"PBO:0051410"}


id: PR:O74330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S27-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02489","PANTHER:PTHR11594:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.10","secondary_identifiers":["UniProtKB:O74330"],"synonyms":[{"name":"Spom972h-RPS27L","type":"exact"}],"termid":"PR:O74330"}


id: GO:0015274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. The membrane is an organellar membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated chloride channel activity","termid":"GO:0005247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"organellar voltage-gated chloride channel activity","synonyms":[{"name":"organellar voltage gated chloride channel activity","type":"exact"},{"name":"organellar voltage-dependent chloride channel activity","type":"exact"}],"termid":"GO:0015274"}


id: GO:0098030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of constriction located below the head and above the tail sheath of viruses with contractile tails (Myoviridae).","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, neck","termid":"GO:0098030"}


id: GO:0050159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: o-orsellinate + H+ = CO2 + orcinol.","definition_xrefs":["RHEA:16733","EC:4.1.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"orsellinate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R02831","MetaCyc:ORSELLINATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"orsellinate carboxy-lyase (orcinol-forming)","type":"related"},{"name":"orsellinate carboxy-lyase activity","type":"related"}],"termid":"GO:0050159"}


id: PR:O60160
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase omh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.12c","synonyms":[{"name":"Spom972h-omh1","type":"exact"}],"termid":"PR:O60160"}


id: PR:P18869
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-isopropylmalate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.02c","secondary_identifiers":["UniProtKB:P18869"],"synonyms":[{"name":"3-IPM-DH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-leuB","type":"exact"},{"name":"beta-IPM dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P18869"}


id: GO:1903868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of methylenetetrahydrofolate reductase (NAD(P)H) activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:rph","PMID:24769206","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity (obsolete GO:1903868)","synonyms":[{"name":"regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"regulation of 5,10-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"regulation of 5,10-methylenetetrahydrofolic acid reductase activity","type":"broad"},{"name":"regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"regulation of MTHFR activity","type":"broad"},{"name":"regulation of MetF","type":"related"},{"name":"regulation of N(5),N(10)-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"regulation of N(5,10)-methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"regulation of methylenetetrahydrofolate reductase activity","type":"broad"},{"name":"regulation of methylenetetrahydrofolic acid reductase activity","type":"broad"}],"termid":"GO:1903868"}


id: GO:0099108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activation potassium ion channel activity via direct interaction with a potassium ion channel during G protein-coupled receptor signaling.","definition_xrefs":["PMID:9429760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activator activity","termid":"GO:0099104"},{"relation_name":"is_a","term_name":"ion channel regulator activity involved in G protein-coupled receptor signaling pathway","termid":"GO:0099107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"potassium channel activator activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"potassium channel activator activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099108"}


id: GO:0102512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = delphinidin 3-O-beta-D-glucoside-5-O-beta-D-glucoside betaine + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102512)","termid":"GO:0102512"}


id: GO:1903437
data:
  {"annotated_genes":["SJAG_03048","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[103485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[102160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cytokinesis","termid":"GO:1902413"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"negatively_regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic cytokinetic process","type":"exact"},{"name":"down-regulation of mitotic cytokinetic process","type":"exact"},{"name":"downregulation of mitotic cytokinetic process","type":"exact"},{"name":"inhibition of mitotic cytokinetic process","type":"narrow"}],"termid":"GO:1903437","terms_by_termid":{"GO:1903472":null,"GO:1903500":null,"GO:1905757":null}}


id: PR:O13909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.01 gene.","definition_xrefs":["UniProtKB:O13909","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.01","synonyms":[{"name":"Spom972h-SPAC23C11.01","type":"exact"}],"termid":"PR:O13909"}


id: PBO:0089413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase escort protein Mrs6","termid":"PBO:0089413"}


id: GO:1900071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfite transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:10234785","PMID:10870099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"regulates","term_name":"sulfite transmembrane transport","termid":"GO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of sulfite transmembrane transport","synonyms":[{"name":"regulation of sulfite transport","type":"exact"},{"name":"regulation of sulphite transport","type":"exact"}],"termid":"GO:1900071"}


id: PBO:0077894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taperin","termid":"PBO:0077894"}


id: MONDO:1011209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited disorder affecting the structure, composition, and quantity of tooth enamel in dogs due to a variation in the ACP4 gene.","definition_xrefs":["PMID:30877375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta, non-human animal","termid":"MONDO:1012952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, ACP4-related, dog","secondary_identifiers":["OMIA:002177-9615"],"termid":"MONDO:1011209","xrefs":{"Monarch":{"xref_id":"1011209"}}}


id: PBO:0067381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 483, pseudogene","termid":"PBO:0067381"}


id: MONDO:0021221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the vestibulocochlear nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibulocochlear nerve disorder","termid":"MONDO:0001563"},{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibulocochlear nerve neoplasm","secondary_identifiers":["SCTID:387891008","MEDGEN:91099","UMLS:C0346330","NCIT:C5120"],"synonyms":[{"name":"Vestibuloacoustic nerve neoplasms","type":"exact"},{"name":"acoustic nerve neoplasm","type":"exact"},{"name":"acoustic nerve tumor","type":"exact"},{"name":"acoustic nerve tumour","type":"exact"},{"name":"cranial nerve eight neoplasms","type":"exact"},{"name":"eighth cranial nerve neoplasm","type":"exact"},{"name":"eighth cranial nerve neoplasms","type":"exact"},{"name":"eighth cranial nerve tumor","type":"exact"},{"name":"eighth cranial nerve tumour","type":"exact"},{"name":"neoplasm of acoustic nerve","type":"exact"},{"name":"neoplasm of eighth cranial nerve","type":"exact"},{"name":"neoplasm of the acoustic nerve","type":"exact"},{"name":"neoplasm of the eighth cranial nerve","type":"exact"},{"name":"neoplasm of the vestibulocochlear nerve","type":"exact"},{"name":"neoplasm of vestibulocochlear nerve","type":"exact"},{"name":"tumor of acoustic nerve","type":"exact"},{"name":"tumor of eighth cranial nerve","type":"exact"},{"name":"tumor of the acoustic nerve","type":"exact"},{"name":"tumor of the eighth cranial nerve","type":"exact"},{"name":"tumor of the vestibulocochlear nerve","type":"exact"},{"name":"tumor of vestibulocochlear nerve","type":"exact"},{"name":"tumour of acoustic nerve","type":"exact"},{"name":"tumour of eighth cranial nerve","type":"exact"},{"name":"tumour of the acoustic nerve","type":"exact"},{"name":"tumour of the eighth cranial nerve","type":"exact"},{"name":"tumour of the vestibulocochlear nerve","type":"exact"},{"name":"tumour of vestibulocochlear nerve","type":"exact"},{"name":"vestibulocochlear nerve neoplasm (disease)","type":"exact"},{"name":"vestibulocochlear nerve neoplasms","type":"exact"},{"name":"vestibulocochlear nerve tumor","type":"exact"},{"name":"vestibulocochlear nerve tumour","type":"exact"}],"termid":"MONDO:0021221","xrefs":{"Monarch":{"xref_id":"0021221"}}}


id: MOD:01109
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9-fluorenylmethyloxycarbonyl (Fmoc)","termid":"MOD:01109"}


id: GO:0046921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->6) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"alpha-(1->6)-fucosyltransferase activity","synonyms":[{"name":"alpha(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,6-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046921"}


id: MONDO:0011486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy type 1B is a rare, genetic neuromuscular disorder characterized by proximal and symmetrical muscle weakness (particularly of neck, sternomastoid, facial and diaphragm muscles), spinal rigidity, joint contractures (Achilles tendon, elbows, hands), generalized muscle hypertrophy and early respiratory failure (usually in the first decade of life). Patients typically present delayed motor milestones and grossly elevated serum creatine kinase levels, and with disease progression, forced expiratory abdominal squeeze and nocturnal hypoventilation.","definition_xrefs":["Orphanet:98893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy 1B","secondary_identifiers":["MEDGEN:346746","SCTID:764944006","DOID:0110634","UMLS:C1858118","MESH:C565748","OMIM:604801","GARD:12586"],"synonyms":[{"name":"CMD1B","type":"exact"},{"name":"MDC1B","type":"exact"},{"name":"congenital muscular dystrophy type 1B","type":"exact"},{"name":"muscular dystrophy, congenital, 1B","type":"related"}],"termid":"MONDO:0011486","xrefs":{"Monarch":{"xref_id":"0011486"}}}


id: PBO:0085591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in biosynthesis of the coenzyme lipoic acid; has similarity to E. coli lipoic acid synthase","termid":"PBO:0085591"}


id: MONDO:0012500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chilblain lupus in which the cause of the disease is a mutation in the TREX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial chilblain lupus","termid":"MONDO:0018827"},{"relation_name":"is_a","term_name":"TREX1-related type 1 interferonopathy","termid":"MONDO:0700256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"chilblain lupus 1","secondary_identifiers":["UMLS:C0024145","OMIM:610448","MEDGEN:9822","GARD:18493"],"synonyms":[{"name":"CHBL1","type":"related"},{"name":"TREX1 chilblain lupus","type":"exact"},{"name":"chilblain lupus","type":"broad"},{"name":"chilblain lupus 1","type":"exact"},{"name":"chilblain lupus caused by mutation in TREX1","type":"exact"},{"name":"chilblain lupus type 1","type":"exact"}],"termid":"MONDO:0012500","xrefs":{"Monarch":{"xref_id":"0012500"}}}


id: PR:G2TRN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new9 gene.","definition_xrefs":["UniProtKB:G2TRN2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.10","synonyms":[{"name":"Spom972h-new9","type":"exact"}],"termid":"PR:G2TRN2"}


id: GO:1990659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining manganese ions such that they are separated from other components of a biological system.","definition_xrefs":["PMID:25417112","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of manganese ion (obsolete GO:1990659)","synonyms":[{"name":"manganese ion retention","type":"exact"},{"name":"manganese ion sequestering","type":"exact"},{"name":"manganese ion sequestration","type":"exact"},{"name":"manganese ion storage","type":"exact"},{"name":"retention of manganese ion","type":"exact"},{"name":"sequestration of manganese ion","type":"exact"},{"name":"storage of manganese ion","type":"exact"}],"termid":"GO:1990659"}


id: GO:0006673
data:
  {"annotated_genes":["SJAG_03015","SJAG_00506","SJAG_02168","SJAG_04913","SJAG_05311","SJAG_04878","SJAG_03953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75800],"is_not":false,"summary":null,"term":"GO:0006673"},{"annotations":[73442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[78991,95012,75258,91563,112334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol phosphoceramides, any lipid with a phosphodiester bridge between an inositol residue and the ceramide group.","definition_xrefs":["PMID:19726565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_02168":null,"SJAG_03015":null,"SJAG_03953":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"inositol phosphoceramide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006674"],"synonyms":[{"name":"inositol phosphorylceramide metabolic process","type":"exact"},{"name":"inositol phosphorylceramide metabolism","type":"exact"},{"name":"inositolphosphoceramide metabolism","type":"exact"}],"termid":"GO:0006673","terms_by_termid":{"GO:0006673":null,"GO:0006676":null,"GO:0051999":null}}


id: PBO:0064145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX/knotted 1 homeobox 2","termid":"PBO:0064145"}


id: GO:0090651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the cytoplasm located at the apical side of the cell. Used in reference to animal polarized epithelial cells.","definition_xrefs":["PMID:17494872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"apical cytoplasm","termid":"GO:0090651"}


id: PBO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 13","termid":"PBO:0070307"}


id: FYPO:0001995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing polymyxin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on polymyxin B","synonyms":[{"name":"normal cell population growth in presence of polymyxin B","type":"exact"},{"name":"normal cell population growth on polymyxin B","type":"exact"},{"name":"normal cellular response to polymyxin B","type":"related"},{"name":"normal vegetative cell population growth on polymixin B","type":"exact"}],"termid":"FYPO:0001995"}


id: GO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a collectin, a member of a group of structurally related pattern recognition molecules characterized by having a carbohydrate recognition domain of the C-type lectin family at the C-terminus and a collagenous domain at the N-terminus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"collectin binding","termid":"GO:0001862"}


id: PBO:0109630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin B aspartic peptidase (pseudogene)","termid":"PBO:0109630"}


id: FYPO:0000821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of M-factor, the mating pheromone produced by mating type minus cells, released into the growth medium is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of pheromone in growth medium","termid":"FYPO:0000820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"decreased concentration of M-factor in growth medium","synonyms":[{"name":"decreased accumulation of M-factor in growth medium","type":"related"},{"name":"decreased level of M-factor in growth medium","type":"exact"},{"name":"decreased release of M-factor into growth medium","type":"related"},{"name":"reduced concentration of M-factor in growth medium","type":"exact"}],"termid":"FYPO:0000821"}


id: MONDO:0007089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an association of the apolipoprotein E E4 allele.","definition_xrefs":["DOID:0110035","PMID:8346443"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"},{"relation_name":"is_a","term_name":"familial Alzheimer disease","termid":"MONDO:0100087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease 2","secondary_identifiers":["OMIM:104310","UMLS:C1863051","MEDGEN:400197","GARD:12799","MESH:C536595"],"synonyms":[{"name":"AD2","type":"exact"},{"name":"Alzheimer disease 2","type":"exact"},{"name":"Alzheimer disease 2, late onset","type":"exact"},{"name":"Alzheimer disease 2, late-onset","type":"related"},{"name":"Alzheimer disease associated with APOE E4","type":"exact"},{"name":"Alzheimer disease associated with APOE4","type":"exact"},{"name":"Alzheimer disease type 2","type":"exact"},{"name":"Alzheimer disease-2","type":"exact"},{"name":"Alzheimer's disease 2","type":"exact"},{"name":"Alzheimer's disease type 2","type":"exact"},{"name":"LOFAD","type":"related"},{"name":"late onset Alzheimer disease","type":"exact"},{"name":"late onset familial Alzheimer disease","type":"exact"},{"name":"late-onset familial alzheimer disease","type":"exact"}],"termid":"MONDO:0007089","xrefs":{"Monarch":{"xref_id":"0007089"}}}


id: MOD:00337
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carbamoyl-L-cysteine.","definition_xrefs":["PubMed:240389","Unimod:5#C","RESID:AA0332","PubMed:12586941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoylated residue","termid":"MOD:00398"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carbamoyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(carbamoylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(aminocarbonyl)sulfanylpropanoic acid","type":"exact"},{"name":"2-amino-3-(aminocarbonyl)thiopropanoic acid","type":"exact"},{"name":"MOD_RES S-carbamoylcysteine","type":"exact"},{"name":"S-(aminocarbonyl)cysteine","type":"exact"},{"name":"S-carbamoyl-L-cysteine","type":"exact"},{"name":"S-carbamoylcysteine","type":"exact"},{"name":"S-carbamylcysteine","type":"exact"},{"name":"S-cysteinyl carbamate ester","type":"exact"},{"name":"SCbmCys","type":"exact"},{"name":"alpha-amino-beta-carbamylthiopropionic acid","type":"exact"},{"name":"beta-carbamylthioalanine","type":"exact"}],"termid":"MOD:00337"}


id: PBO:0087204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase; required for the biosynthesis of spermidine and spermine; cells lacking Spe2p require spermine or spermidine for growth in the presence of oxygen but not when grown anaerobically","termid":"PBO:0087204"}


id: PR:O43092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oxa102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein oxa1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.03","synonyms":[{"name":"Sp2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-oxa102","type":"exact"},{"name":"cytochrome oxidase biogenesis protein 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43092"}


id: PBO:0082290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginine/alanine amino peptidase; overproduction stimulates glycogen accumulation; AAP1 has a paralog, APE2, that arose from the whole genome duplication","termid":"PBO:0082290"}


id: PBO:0053031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal protein transmembrane 4 beta pseudogene 2","termid":"PBO:0053031"}


id: MONDO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign pathologic process characterized by the transformation of the mesothelium into fallopian tube epithelium. It occurs in the peritoneum and may affect the serosa surface of the uterus and the adnexa. It may be asymptomatic or present as pelvic pain.","definition_xrefs":["NCIT:C40121"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endometriosis","termid":"MONDO:0005133"},{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosalpingiosis","secondary_identifiers":["MEDGEN:78704","SCTID:55850004","UMLS:C0269106","DOID:11427"],"synonyms":[{"name":"endosalpingiosis","type":"exact"}],"termid":"MONDO:0001283","xrefs":{"Monarch":{"xref_id":"0001283"}}}


id: PBO:0082013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger containing ubiquitin peptidase 1","termid":"PBO:0082013"}


id: MOD:00603
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 283 is redundant with Unimod 280. Remap to MOD:00600","definition_xrefs":["Unimod:283"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00603 N-ethylation (obsolete MOD:00603)","termid":"MOD:00603"}


id: GO:1900711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tensidol B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of tensidol B biosynthetic process","termid":"GO:1900710"},{"relation_name":"negatively_regulates","term_name":"tensidol B biosynthetic process","termid":"GO:1900608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tensidol B biosynthetic process","synonyms":[{"name":"down regulation of tensidol B anabolism","type":"exact"},{"name":"down regulation of tensidol B biosynthesis","type":"exact"},{"name":"down regulation of tensidol B biosynthetic process","type":"exact"},{"name":"down regulation of tensidol B formation","type":"exact"},{"name":"down regulation of tensidol B synthesis","type":"exact"},{"name":"down-regulation of tensidol B anabolism","type":"exact"},{"name":"down-regulation of tensidol B biosynthesis","type":"exact"},{"name":"down-regulation of tensidol B biosynthetic process","type":"exact"},{"name":"down-regulation of tensidol B formation","type":"exact"},{"name":"down-regulation of tensidol B synthesis","type":"exact"},{"name":"downregulation of tensidol B anabolism","type":"exact"},{"name":"downregulation of tensidol B biosynthesis","type":"exact"},{"name":"downregulation of tensidol B biosynthetic process","type":"exact"},{"name":"downregulation of tensidol B formation","type":"exact"},{"name":"downregulation of tensidol B synthesis","type":"exact"},{"name":"inhibition of tensidol B anabolism","type":"exact"},{"name":"inhibition of tensidol B biosynthesis","type":"exact"},{"name":"inhibition of tensidol B biosynthetic process","type":"narrow"},{"name":"inhibition of tensidol B formation","type":"exact"},{"name":"inhibition of tensidol B synthesis","type":"exact"},{"name":"negative regulation of tensidol B anabolism","type":"exact"},{"name":"negative regulation of tensidol B biosynthesis","type":"exact"},{"name":"negative regulation of tensidol B formation","type":"exact"},{"name":"negative regulation of tensidol B synthesis","type":"exact"}],"termid":"GO:1900711"}


id: PBO:0081296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 76","termid":"PBO:0081296"}


id: MONDO:0016757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant triton tumor (MTT) is a rare aggressive subtype of malignant peripheral nerve sheath tumor (MPNST) characterized histopathologically by focal rhabdomyoblastic differentiation.","definition_xrefs":["Orphanet:252212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant triton tumor","secondary_identifiers":["SCTID:404040002","GARD:20743","DOID:6707","ICD9:171.9","ICDO:9561/3","NCIT:C4335","UMLS:C0334616","MEDGEN:90816"],"synonyms":[{"name":"MPNST with rhabdomyoblastic differentiation","type":"exact"},{"name":"MPNST with rhabdomyosarcoma","type":"exact"},{"name":"MPNST with rhabdomyosarcomatous differentiation","type":"exact"},{"name":"MTT","type":"exact"},{"name":"malignant Triton tumor","type":"exact"},{"name":"malignant Triton tumour","type":"exact"},{"name":"malignant neoplasm of peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant neoplasm of the peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant peripheral nerve sheath neoplasm with rhabdomyosarcoma","type":"exact"},{"name":"malignant peripheral nerve sheath tumor with rhabdomyosarcoma","type":"exact"},{"name":"malignant peripheral nerve sheath tumor with rhabdomyosarcomatous differenciation","type":"exact"},{"name":"malignant peripheral nerve sheath tumour with rhabdomyosarcoma","type":"exact"},{"name":"malignant peripheral nerve sheath tumour with rhabdomyosarcomatous differenciation","type":"exact"},{"name":"malignant tumor of peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant tumor of the peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant tumour of peripheral nerve sheath with rhabdomyosarcoma","type":"exact"},{"name":"malignant tumour of the peripheral nerve sheath with rhabdomyosarcoma","type":"exact"}],"termid":"MONDO:0016757","xrefs":{"Monarch":{"xref_id":"0016757"}}}


id: PBO:0067875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 177","termid":"PBO:0067875"}


id: RO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"partner_in","termid":"RO:0002461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target_participant_in","termid":"RO:0002463"}


id: PBO:0050891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IER3 antisense RNA 1","termid":"PBO:0050891"}


id: MONDO:0013824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CPLANE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 17","secondary_identifiers":["GARD:15824","NCIT:C175702","OMIM:614615","DOID:0110986","MEDGEN:766178","UMLS:C3553264"],"synonyms":[{"name":"CPLANE1 Joubert syndrome","type":"exact"},{"name":"JBTS17","type":"exact"},{"name":"Joubert syndrome 17","type":"exact"},{"name":"Joubert syndrome caused by mutation in CPLANE1","type":"exact"},{"name":"Joubert syndrome type 17","type":"exact"}],"termid":"MONDO:0013824","xrefs":{"Monarch":{"xref_id":"0013824"}}}


id: MONDO:0008864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Biemond syndrome type 2 (BS2) is a rare genetic neurological and developmental disorder reported in a very small number of patients with a poorly defined phenotype which includes iris coloboma, short stature, obesity, hypogonadism, postaxial polydactyly, and intellectual disability. Hydrocephalus and facial dysostosis were also reported. BS2 shares features with Bardet-Biedl syndrome. There have been no further descriptions in the literature since 1997.","definition_xrefs":["Orphanet:141333"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Biemond syndrome type 2","secondary_identifiers":["MEDGEN:347159","UMLS:C1859487","MESH:C565902","SCTID:717887003","OMIM:210350","GARD:882"],"synonyms":[{"name":"BIEMOND syndrome II","type":"related"},{"name":"BS2","type":"related"},{"name":"Biemond syndrome 2","type":"related"},{"name":"Biemond syndrome type 2","type":"exact"},{"name":"hypogonadism-short stature-coloboma-preaxial polydactyly syndrome","type":"exact"},{"name":"iris coloboma, intellectual disability, obesity, hypogenitalism, and postaxial polydactyly","type":"related"},{"name":"iris coloboma, mental retardation, obesity, hypogenitalism, and postaxial polydactyly","type":"related"}],"termid":"MONDO:0008864","xrefs":{"Monarch":{"xref_id":"0008864"}}}


id: PBO:0053426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 368","termid":"PBO:0053426"}


id: GO:0022620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a microgametophyte. The microgametophyte vegetative cell gives rise to the pollen tube.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microgametophyte vegetative cell differentiation","synonyms":[{"name":"tube cell differentiation","type":"related"},{"name":"vegetative cell differentiation","type":"related"}],"termid":"GO:0022620"}


id: GO:0102635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-deoxycorticosterone + NADH + H+ = 4-pregnen-20,21-diol-3-one + NAD.","definition_xrefs":["HEA:47716","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"11-deoxycorticosterone reductase activity","secondary_identifiers":["RHEA:47716","MetaCyc:RXN-15607"],"termid":"GO:0102635"}


id: GO:0007303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic transport, nurse cell to oocyte (obsolete GO:0007303)","termid":"GO:0007303"}


id: MONDO:0001818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuralgic syndromes which feature chronic or recurrent facial pain as the primary manifestation of disease. Disorders of the trigeminal and facial nerves are frequently associated with these conditions.","definition_xrefs":["MESH:D005156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"cranial neuralgia","termid":"MONDO:0016374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"facial neuralgia","secondary_identifiers":["DOID:13865","ICD9:351.8","SCTID:4151000119102","MEDGEN:5099","UMLS:C0015467","EFO:0009380"],"synonyms":[{"name":"facial nerve neuralgia","type":"exact"},{"name":"neuralgia of facial nerve","type":"exact"}],"termid":"MONDO:0001818","xrefs":{"Monarch":{"xref_id":"0001818"}}}


id: MONDO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the pharynx.","definition_xrefs":["NCIT:C102872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx cancer","termid":"MONDO:0005517"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"},{"relation_name":"is_a","term_name":"carcinoma of pharynx","termid":"MONDO:0021345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pharyngeal squamous cell carcinoma","secondary_identifiers":["EFO:1001965","SCTID:408649007","UMLS:C1319317","DOID:0050921","MEDGEN:728086"],"synonyms":[{"name":"pharyngeal (including hypopharyngeal and oropharyngeal) squamous cell carcinoma","type":"exact"},{"name":"pharyngeal squam. cell carcinoma","type":"exact"},{"name":"pharyngeal squamous cell carcinoma","type":"exact"},{"name":"pharyngeal throat squamous cell cancer","type":"exact"},{"name":"pharynx squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0000536","xrefs":{"Monarch":{"xref_id":"0000536"}}}


id: PBO:0085416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter for choline, ethanolamine, and carnitine; involved in the uptake of nitrogen mustard and the uptake of glycine betaine during hypersaline stress; co-regulated with phospholipid biosynthetic genes and negatively regulated by choline and myo-inositol","termid":"PBO:0085416"}


id: PBO:0079277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 1","termid":"PBO:0079277"}


id: GO:0090586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylglucosamine (out) = protein cysteine + N-acetylglucosamine-6-phosphate (in).","definition_xrefs":["PMID:8246840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003824","GO:0005215","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-phosphocysteine-N-acetylglucosamine phosphotransferase system transporter activity","termid":"GO:0090586"}


id: MONDO:0018915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pneumococcal meningitis (obsolete MONDO:0018915)","termid":"MONDO:0018915","xrefs":{"Monarch":{"xref_id":"0018915"}}}


id: GO:0034529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-3-carboxybenzalpyruvate + H2O = 3-formylsalicylic acid + pyruvate.","definition_xrefs":["PMID:7710320"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-carboxy-benzalpyruvate hydratase-aldolase activity (obsolete GO:0034529)","termid":"GO:0034529"}


id: PR:O59794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1702 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.03","synonyms":[{"name":"Spom972h-rpl1702","type":"exact"}],"termid":"PR:O59794"}


id: PBO:0082548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall-related secretory glycoprotein; induced by nutrient deprivation-associated growth arrest and upon entry into stationary phase; may be involved in adaptation prior to stationary phase entry; protein demonstrates amyloid properties in vivo; YGP1 has a paralog, SPS100, that arose from the whole genome duplication","termid":"PBO:0082548"}


id: PR:Q10100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear transport factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15F9.03c","secondary_identifiers":["UniProtKB:Q10100"],"synonyms":[{"name":"NTF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NUTF2","type":"exact"}],"termid":"PR:Q10100"}


id: GO:0032077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclease activity","termid":"GO:0032075"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of deoxyribonuclease activity","synonyms":[{"name":"DNase activator","type":"related"},{"name":"activation of deoxyribonuclease activity","type":"narrow"},{"name":"deoxyribonuclease activator","type":"related"},{"name":"stimulation of deoxyribonuclease activity","type":"narrow"},{"name":"up regulation of deoxyribonuclease activity","type":"exact"},{"name":"up-regulation of deoxyribonuclease activity","type":"exact"},{"name":"upregulation of deoxyribonuclease activity","type":"exact"}],"termid":"GO:0032077"}


id: PBO:0055161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2580","termid":"PBO:0055161"}


id: FYPO:0005933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during mitotic G1 phase","synonyms":[{"name":"decreased protein accumulation during mitotic G1 phase","type":"related"},{"name":"decreased protein level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"reduced protein level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005933"}


id: PBO:0065770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QKI, KH domain containing RNA binding","termid":"PBO:0065770"}


id: GO:1903237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte tethering or rolling.","definition_xrefs":["GOC:als","PMID:18308860","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"regulation of leukocyte tethering or rolling","termid":"GO:1903236"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904995"},{"relation_name":"negatively_regulates","term_name":"leukocyte tethering or rolling","termid":"GO:0050901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of leukocyte tethering or rolling","synonyms":[{"name":"down regulation of leukocyte tethering or rolling","type":"exact"},{"name":"down-regulation of leukocyte tethering or rolling","type":"exact"},{"name":"downregulation of leukocyte tethering or rolling","type":"exact"},{"name":"inhibition of leukocyte tethering or rolling","type":"narrow"}],"termid":"GO:1903237"}


id: GO:1904949
data:
  {"annotated_genes":["SJAG_02254","SJAG_01111","SJAG_02589","SJAG_03694","SJAG_01622","SJAG_00136","SJAG_05294","SJAG_00746","SJAG_02994","SJAG_03036","SJAG_03944","SJAG_03982","SJAG_03962","SJAG_00212","SJAG_04955","SJAG_02895","SJAG_04989","SJAG_02990","SJAG_04596","SJAG_03839","SJAG_00743","SJAG_01913","SJAG_04213","SJAG_00045","SJAG_02872","SJAG_03576","SJAG_02500","SJAG_04005","SJAG_03145","SJAG_02782","SJAG_01447","SJAG_05192","SJAG_02023","SJAG_00516","SJAG_03406","SJAG_00440","SJAG_05282","SJAG_03579","SJAG_02778","SJAG_01465","SJAG_01397","SJAG_01016","SJAG_03844","SJAG_00934","SJAG_02447","SJAG_02869","SJAG_00735","SJAG_02571","SJAG_01471","SJAG_01611","SJAG_02466","SJAG_04355","SJAG_02385","SJAG_05020","SJAG_00873","SJAG_03033","SJAG_04097","SJAG_03787","SJAG_02470","SJAG_03758","SJAG_02798","SJAG_02303","SJAG_01817","SJAG_00739","SJAG_02549","SJAG_05313","SJAG_04015","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99818,98717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904564"},{"annotations":[72496,72235,112947,87545,71180,88616,71421,66469,72056,108856,57648,115207,93764,101347,69547,75823,60928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031011"},{"annotations":[100296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033176"},{"annotations":[93911,95651,112932,79390,70181,93967,73489,87901,72693,79513,87399,90340,92052,93766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016586"},{"annotations":[111900,113094,107956,71406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[114813,93892,87400,75804,76659,71259,107241,69546,112933,72292,95652,77510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016514"},{"annotations":[72495,113122,98747,96416,76620,69623,107679,117262,112950,79810,75822,73382,92130,108864,98019,114520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"},{"annotations":[95592,99730,95411,89909,103696,61623,91808],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[87781,118535,98698,70791,102459,109672,96378,60333],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of ATPase activity.","definition_xrefs":["GO_REF:0000088","PMID:9606181","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00440":null,"SJAG_00516":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_00934":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01465":null,"SJAG_01471":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02466":null,"SJAG_02470":null,"SJAG_02500":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02778":null,"SJAG_02782":null,"SJAG_02798":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02895":null,"SJAG_02990":null,"SJAG_02994":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03406":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_03758":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03944":null,"SJAG_03962":null,"SJAG_03982":null,"SJAG_04005":null,"SJAG_04015":null,"SJAG_04097":null,"SJAG_04213":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_04755":null,"SJAG_04955":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05282":null,"SJAG_05294":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATPase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"VPS4 complex","type":"narrow"}],"termid":"GO:1904949","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0000812":null,"GO:0016514":null,"GO:0016586":null,"GO:0031011":null,"GO:0033176":null,"GO:0070824":null,"GO:1904564":null}}


id: PBO:0045673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 light intermediate chain 1","termid":"PBO:0045673"}


id: MONDO:0009262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM1 gangliosidosis type 3 is a mild, chronic, adult form of GM1 gangliosidosis characterized by onset generally during childhood or adolescence and by cerebellar dysfunction.","definition_xrefs":["Orphanet:79257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GM1 gangliosidosis","termid":"MONDO:0018149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"GM1 gangliosidosis type 3","secondary_identifiers":["UMLS:C0268273","NANDO:2201198","NANDO:1200069","MEDGEN:78655","icd11.foundation:1331496842","OMIM:230650","GARD:2431","SCTID:238027003","DOID:0080489"],"synonyms":[{"name":"Beta-galactosidase deficiency type 3","type":"related"},{"name":"GM1-gangliosidosis, type 3","type":"related"},{"name":"GM1-gangliosidosis, type III","type":"related"},{"name":"adult GM1 gangliosidosis","type":"related"},{"name":"adult-onset GM1 gangliosidosis","type":"exact"},{"name":"gangliosidosis GM1 type 3","type":"related"},{"name":"gangliosidosis generalised GM1 chronic type","type":"related"},{"name":"gangliosidosis generalized GM1 chronic type","type":"related"},{"name":"gangliosidosis, generalised GM1, adult type","type":"related"},{"name":"gangliosidosis, generalised GM1, chronic type","type":"related"},{"name":"gangliosidosis, generalised GM1, type 3","type":"related"},{"name":"gangliosidosis, generalized GM1, adult type","type":"related"},{"name":"gangliosidosis, generalized GM1, chronic type","type":"related"},{"name":"gangliosidosis, generalized GM1, type 3","type":"related"}],"termid":"MONDO:0009262","xrefs":{"Monarch":{"xref_id":"0009262"}}}


id: PBO:0045738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF transcription factor 1","termid":"PBO:0045738"}


id: GO:1903449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of androst-4-ene-3,17-dione.","definition_xrefs":["GO_REF:0000068","PMID:2028480","GOC:mr","PMID:4149619","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"androst-4-ene-3,17-dione biosynthetic process","synonyms":[{"name":"androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"androst-4-ene-3,17-dione formation","type":"exact"},{"name":"androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"androstenedione biosynthetic process","type":"exact"}],"termid":"GO:1903449"}


id: MONDO:0010645
data:
  {"annotated_genes":["SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86977],"is_not":false,"summary":null,"term":"MONDO:0010645"}]},"cv_name":"mondo","definition":"Oculocerebrorenal syndrome of Lowe (OCRL) is a multisystem disorder characterized by congenital cataracts, glaucoma, intellectual disabilities, postnatal growth retardation and renal tubular dysfunction with chronic renal failure.","definition_xrefs":["Orphanet:534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"oculocerebrorenal syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:18145","NCIT:C84940","NANDO:2100028","ICD9:270.8","OMIM:309000","DOID:1056","GARD:3295","UMLS:C0028860","NORD:1379","SCTID:79385002","MedDRA:10051707","MESH:D009800","NANDO:2200188","icd11.foundation:1392767390"],"synonyms":[{"name":"Lowe disease","type":"exact"},{"name":"Lowe oculo-cerebro-renal syndrome","type":"exact"},{"name":"Lowe oculocerebrorenal syndrome","type":"exact"},{"name":"Lowe syndrome","type":"exact"},{"name":"Lowe syndrome, X-linked recessive","type":"exact"},{"name":"OCR","type":"exact"},{"name":"OCRL","type":"exact"},{"name":"Ocrl1","type":"related"},{"name":"oculo-cerebro-renal dystrophy","type":"exact"},{"name":"oculo-cerebro-renal syndrome","type":"exact"},{"name":"oculocerebrorenal dystrophy","type":"exact"},{"name":"oculocerebrorenal syndrome","type":"exact"},{"name":"oculocerebrorenal syndrome of Lowe","type":"exact"},{"name":"phosphatidylinositol 4,5-biphosphate 5-phosphatase deficiency","type":"exact"},{"name":"phosphatidylinositol 4,5-bisphosphate 5-phosphatase deficiency","type":"related"}],"termid":"MONDO:0010645","terms_by_termid":{"MONDO:0010645":null},"xrefs":{"Monarch":{"xref_id":"0010645"}}}


id: GO:0046189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound biosynthetic process","synonyms":[{"name":"phenol-containing compound anabolism","type":"exact"},{"name":"phenol-containing compound biosynthesis","type":"exact"},{"name":"phenol-containing compound formation","type":"exact"},{"name":"phenol-containing compound synthesis","type":"exact"}],"termid":"GO:0046189"}


id: GO:0006256
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75997],"is_not":false,"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP, uridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UDP metabolic process","termid":"GO:0046048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"UDP breakdown","type":"exact"},{"name":"UDP catabolism","type":"exact"},{"name":"UDP degradation","type":"exact"}],"termid":"GO:0006256","terms_by_termid":{"GO:0006256":null}}


id: GO:0140062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-formylcytosine+ 2-oxoglutarate + O2 = 5-carboxylcytosine + succinate + CO2.","definition_xrefs":["PMID:27918559"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-formylcytosine dioxygenase activity (obsolete GO:0140062)","synonyms":[{"name":"5fC dioxygenase","type":"exact"}],"termid":"GO:0140062"}


id: MONDO:0958179
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84765],"is_not":false,"summary":null,"term":"MONDO:0958179"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycine encephalopathy","termid":"MONDO:0011612"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"glycine encephalopathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:605899"],"termid":"MONDO:0958179","terms_by_termid":{"MONDO:0958179":null},"xrefs":{"Monarch":{"xref_id":"0958179"}}}


id: PBO:0081601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 525","termid":"PBO:0081601"}


id: PBO:0029451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_polysaccharide_in_growth_medium","termid":"PBO:0029451"}


id: PBO:0073867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 3","termid":"PBO:0073867"}


id: FYPO:0002023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the septum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"output_of","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal septum morphology during vegetative growth","synonyms":[{"name":"abnormal septum morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002023"}


id: GO:1900009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["GOC:TermGenie","PMID:15020466"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900009)","synonyms":[{"name":"positive regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"positive regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"positive regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900009"}


id: SO:0000847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a tmRNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"tmRNA","termid":"SO:0000584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_region","synonyms":[{"name":"tmRNA region","type":"exact"}],"termid":"SO:0000847"}


id: FYPO:0003781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal nuclear envelope morphology during mitotic interphase","synonyms":[{"name":"normal nuclear envelope morphology during interphase during vegetative growth","type":"exact"},{"name":"normal nuclear envelope morphology during interphase of mitotic cell cycle","type":"exact"},{"name":"normal nuclear membrane morphology during mitotic interphase","type":"narrow"}],"termid":"FYPO:0003781"}


id: PBO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp22","termid":"PBO:0000839"}


id: MONDO:0016219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysmorphism-pectus carinatum-joint laxity syndrome is characterized by joint laxity, pectus carinatum and facial dysmorphism (mild frontal bossing, a beaked nose with a low nasal bridge, malar hypoplasia, chubby cheeks, a striking philtrum and arched upper lips). It has been described in two siblings. The mode of transmission is unknown.","definition_xrefs":["Orphanet:2104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysmorphism-pectus carinatum-joint laxity syndrome","secondary_identifiers":["GARD:18760","MEDGEN:1385827","UMLS:C4518558"],"synonyms":[{"name":"Guizar Vasquez Sanchez Manzano syndrome","type":"related"},{"name":"Guízar Vázquez-Sánchez-Manzano syndrome","type":"exact"},{"name":"dysmorphism-pectus carinatum-joint laxity syndrome","type":"exact"}],"termid":"MONDO:0016219","xrefs":{"Monarch":{"xref_id":"0016219"}}}


id: PBO:0043892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIM1 divergent transcript","termid":"PBO:0043892"}


id: PR:000085718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-36. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00663.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:37459529"],"direct_ancestors":[{"relation_name":"has_part","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Me(K36)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00663","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/K36Me","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00663","type":"related"},{"name":"hht2/Me(K36)","type":"exact"}],"termid":"PR:000085718"}


id: PBO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex-associated motor subunit Pam17 (predicted)","termid":"PBO:0001028"}


id: FYPO:0004003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing begins later than normal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["PomBase:mah","GO:0031297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of replication fork processing","synonyms":[{"name":"delayed onset of collapsed replication fork processing","type":"exact"},{"name":"delayed onset of recovery from replication fork arrest","type":"exact"},{"name":"delayed onset of recovery from replication fork stalling","type":"exact"},{"name":"delayed onset of replication fork processing during mitotic cell cycle","type":"related"},{"name":"delayed onset of replication fork processing during vegetative growth","type":"exact"},{"name":"delayed onset of replication fork restart","type":"related"},{"name":"delayed onset of replication restart","type":"related"},{"name":"delayed replication fork processing","type":"exact"}],"termid":"FYPO:0004003"}


id: GO:0070186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of growth hormone, a peptide hormone that is secreted by the anterior pituitary or the placenta into the circulation, and binds to membrane receptors in target tissues to stimulate body growth.","definition_xrefs":["PMID:11445442","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"growth hormone activity","synonyms":[{"name":"GH activity","type":"exact"},{"name":"pituitary growth hormone activity","type":"narrow"},{"name":"placental growth hormone activity","type":"narrow"}],"termid":"GO:0070186"}


id: GO:1901012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (S)-reticuline.","definition_xrefs":["GOC:TermGenie","PMID:22725256","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid biosynthetic process","termid":"GO:0009708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(S)-reticuline biosynthetic process","synonyms":[{"name":"(S)-reticuline anabolism","type":"exact"},{"name":"(S)-reticuline biosynthesis","type":"exact"},{"name":"(S)-reticuline formation","type":"exact"},{"name":"(S)-reticuline synthesis","type":"exact"}],"termid":"GO:1901012"}


id: FYPO:0001572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing L-methionine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0005447","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"abolished cell population growth on methionine nitrogen source","synonyms":[{"name":"abolished growth on methionine nitrogen source","type":"broad"},{"name":"abolished methionine utilization","type":"related"},{"name":"abolished vegetative cell population growth on methionine nitrogen source","type":"exact"},{"name":"cell population growth on methionine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0001572"}


id: SO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that increases transcript stability with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_stability_variant","termid":"SO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_transcript_stability_variant","synonyms":[{"name":"increased transcript stability variant","type":"exact"}],"termid":"SO:0001548"}


id: PBO:0041861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 7","termid":"PBO:0041861"}


id: PBO:0067562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 715, pseudogene","termid":"PBO:0067562"}


id: PBO:0005280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type proton ATPase, P3-type Pma2","termid":"PBO:0005280"}


id: PBO:0061556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, cytosolic pseudogene 3","termid":"PBO:0061556"}


id: MONDO:0003043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare malignant tumor of soft tissue characterized by a bimorphic pattern composed of undifferentiated small round cells and islands of well differentiated hyaline cartilage.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete extraskeletal mesenchymal chondrosarcoma (obsolete MONDO:0003043)","secondary_identifiers":["ICD9:171.9","DOID:4548","NCIT:C27481","SCTID:404080006"],"synonyms":[{"name":"mesenchymal extraosseous chondrosarcoma","type":"exact"},{"name":"mesenchymal extraskeletal chondrosarcoma","type":"exact"}],"termid":"MONDO:0003043","xrefs":{"Monarch":{"xref_id":"0003043"}}}


id: GO:2000912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of galactoglucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"galactoglucomannan catabolic process","termid":"GO:2000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of galactoglucomannan catabolic process","synonyms":[{"name":"regulation of galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000912"}


id: GO:0061112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of bud outgrowth involved in lung branching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"},{"relation_name":"negatively_regulates","term_name":"bud outgrowth involved in lung branching","termid":"GO:0060447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bud outgrowth involved in lung branching","termid":"GO:0061112"}


