# terms

id: MONDO:0018634
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"}]},"cv_name":"mondo","definition":"Hereditary amyloidosis refers to a group of inherited conditions that make up one of the subtypes of amyloidosis. Hereditary amyloidosisis characterized by the deposit of an abnormal protein called amyloid in multiple organs of the body where it should not be, which causes disruption of organ tissue structure and function. In hereditary amyloidosis, amyloid deposits most often occur in tissues of the heart, kidneys, and nervous system. While symptoms of hereditary amyloidosis may appear in childhood, most individuals do not experience symptoms until adulthood. There are many types of hereditary amyloidosis associated with different gene mutations and abnormal proteins. The most common type of hereditary amyloidosis is transthyretin amyloidosis (ATTR),a condition in which the amyloid deposits are most often made up of the transthyretin protein which is made in the liver. Other examplesof hereditary amyloidosis include, but are not limited to, apolipoprotein AI amyloidosis (A ApoAI), gelsolin amyloidosis (A Gel), lysozyme amyloidosis (A Lys), cystatin C amyloidosis (A Cys), fibrinogen Aα-chain amyloidosis (A Fib), and apolipoprotein AII amyloidosis (A ApoAII). Most types of hereditary amyloidosis are inherited in an autosomal dominant manner. Treatment is focused on addressing symptoms of organ damage and slowing down the production of amyloid when possible through methods such as liver transplants.","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"hereditary amyloidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84555","UMLS:C0740340","MESH:D028226","GARD:6611","Orphanet:444116","SCTID:367601000119103","icd11.foundation:1152878652","MEDGEN:148146"],"synonyms":[{"name":"amyloidosis hereditary","type":"related"},{"name":"amyloidosis, Familial","type":"exact"},{"name":"familial amyloidosis","type":"related"},{"name":"hereditary amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0018634","terms_by_termid":{"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0018634"}}}


id: PR:000027897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pap1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:15165244","PomBase:MAH","PMID:1899230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1-like transcription factor","synonyms":[{"name":"CAF3","type":"related"},{"name":"Caffeine resistance protein 3","type":"exact"},{"name":"pap1","type":"exact"}],"termid":"PR:000027897"}


id: GO:0015117
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88164],"is_not":false,"summary":null,"term":"GO:0015117"}]},"cv_name":"molecular_function","definition":"Enables the transfer of thiosulfate ions, HS2O3(1-), from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"thiosulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRANS-RXN-496"],"synonyms":[{"name":"thiosulfate permease activity","type":"related"},{"name":"thiosulphate transporter activity","type":"exact"}],"termid":"GO:0015117","terms_by_termid":{"GO:0015117":null}}


id: PBO:0049756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCCS divergent transcript","termid":"PBO:0049756"}


id: PBO:0060096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 43","termid":"PBO:0060096"}


id: PBO:0031568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecular_function_phenotype","termid":"PBO:0031568"}


id: MONDO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Prunus armeniaca.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete apricot allergy (obsolete MONDO:0000780)","secondary_identifiers":["DOID:0060505"],"synonyms":[{"name":"Prunus armeniaca allergic disease","type":"exact"},{"name":"Prunus armeniaca caused allergic disease","type":"exact"},{"name":"Prunus armeniaca fruit allergy","type":"exact"},{"name":"allergy of Prunus armeniaca","type":"exact"}],"termid":"MONDO:0000780","xrefs":{"Monarch":{"xref_id":"0000780"}}}


id: MONDO:0007610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival fibromatosis - hypertrichosis syndrome is a rare autosomal dominant disorder characterized by a generalized enlargement of the gingiva occurring at birth or during childhood that is associated with generalized hypertrichosis developing at birth, during the first years of life, or at puberty and predominantly affecting the face, upper limbs, and midback.","definition_xrefs":["Orphanet:2026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gingival fibromatosis-hypertrichosis syndrome","secondary_identifiers":["GARD:2324","MESH:C565016","OMIM:135400","SCTID:716008002","UMLS:C1851120","MEDGEN:342675"],"synonyms":[{"name":"CGHT","type":"exact"},{"name":"HTC3","type":"related"},{"name":"chromosome 17Q24.2-q24.3 Duplication syndrome","type":"related"},{"name":"chromosome 17Q24.2-q24.3 deletion syndrome","type":"related"},{"name":"congenital generalised hypertrichosis terminalis","type":"exact"},{"name":"congenital generalized hypertrichosis terminalis","type":"exact"},{"name":"extreme hirsutism with gingival fibromatosis","type":"related"},{"name":"fibromatosis, gingival, with hypertrichosis","type":"related"},{"name":"gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hereditary gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hirsutism-congenital gingival hyperplasia syndrome","type":"exact"},{"name":"hypertrichosis terminalis, generalized, with gingival hyperplasia","type":"related"},{"name":"hypertrichosis terminalis, generalized, with or without gingival hyperplasia","type":"related"},{"name":"hypertrichosis with or without gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with or without gingival hyperplasia","type":"related"},{"name":"microdeletion 17Q24.2-q24.3 syndrome","type":"related"},{"name":"microduplication 17Q24.2-q24.3 syndrome","type":"related"}],"termid":"MONDO:0007610","xrefs":{"Monarch":{"xref_id":"0007610"}}}


id: GO:0044449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a contractile fiber, a fiber composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile fiber part (obsolete GO:0044449)","synonyms":[{"name":"contractile fibre component","type":"exact"},{"name":"muscle fiber component","type":"broad"},{"name":"muscle fibre component","type":"broad"}],"termid":"GO:0044449"}


id: PBO:0090165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH quinone oxidoreductase/ARE-binding protein","termid":"PBO:0090165"}


id: PBO:0084805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria","termid":"PBO:0084805"}


id: PBO:0047840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box S1","termid":"PBO:0047840"}


id: PBO:0081725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 653","termid":"PBO:0081725"}


id: PBO:0050637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 2","termid":"PBO:0050637"}


id: PBO:0013797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin-related protein (predicted)","termid":"PBO:0013797"}


id: PBO:0049204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor kainate type subunit 4","termid":"PBO:0049204"}


id: PBO:0077744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript overexpressed in dedifferentiated liposarcoma","termid":"PBO:0077744"}


id: MONDO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign paroxysmal torticollis of infancy (BPTI) is a rare functional disorder characterized by recurrent episodes of torticollic posturing of the head (inclination or tilting of the head to one side) in healthy children.","definition_xrefs":["Orphanet:71518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"benign paroxysmal torticollis of infancy","secondary_identifiers":["GARD:18913","SCTID:719521002","UMLS:C3494934","icd11.foundation:545726308","MEDGEN:782128"],"termid":"MONDO:0019113","xrefs":{"Monarch":{"xref_id":"0019113"}}}


id: MONDO:0014057
data:
  {"annotated_genes":["SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84878],"is_not":false,"summary":null,"term":"MONDO:0014057"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intermediate maple syrup urine disease","termid":"MONDO:0017052"},{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"maple syrup urine disease, mild variant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554575","MEDGEN:767489","GARD:18388","OMIM:615135"],"synonyms":[{"name":"MSUDMV","type":"related"},{"name":"maple syrup urine disease, mild variant","type":"exact"}],"termid":"MONDO:0014057","terms_by_termid":{"MONDO:0014057":null},"xrefs":{"Monarch":{"xref_id":"0014057"}}}


id: PBO:0002193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin interacting protein 3 homolog Bud6","termid":"PBO:0002193"}


id: PBO:0024818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of cut TWenty","termid":"PBO:0024818"}


id: PBO:0067878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 180","termid":"PBO:0067878"}


id: MONDO:0017877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brazilian hemorrhagic fever, caused by the Sabia virus (a newly discovered arenavirus), is a viral hemorrhagic fever, believed to originate from Sao Paulo, Brazil, with only 3 reported cases (2 of which were due to laboratory accidents) to date, characterized by fever, nausea vomiting myalgia tremors, and hemorragic manifestations such as conjunctival petechia and haematemesis, leading potentially to shock, coma and death.","definition_xrefs":["Orphanet:319239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brazilian hemorrhagic fever","secondary_identifiers":["DOID:0050197","UMLS:C0343633","MEDGEN:575736","SCTID:240524001","GARD:21414"],"synonyms":[{"name":"Sabia hemorrhagic fever","type":"exact"}],"termid":"MONDO:0017877","xrefs":{"Monarch":{"xref_id":"0017877"}}}


id: MONDO:0034943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated vitreoretinopathy (obsolete MONDO:0034943)","secondary_identifiers":["Orphanet:519304"],"termid":"MONDO:0034943","xrefs":{"Monarch":{"xref_id":"0034943"}}}


id: GO:0045914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catecholamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"negatively_regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of catecholamine metabolic process","synonyms":[{"name":"down regulation of catecholamine metabolic process","type":"exact"},{"name":"down-regulation of catecholamine metabolic process","type":"exact"},{"name":"downregulation of catecholamine metabolic process","type":"exact"},{"name":"inhibition of catecholamine metabolic process","type":"narrow"},{"name":"negative regulation of catecholamine metabolism","type":"exact"}],"termid":"GO:0045914"}


id: GO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"macrophage activation","termid":"GO:0042116"},{"relation_name":"part_of","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage activation involved in immune response","synonyms":[{"name":"macrophage activation during immune response","type":"related"},{"name":"macrophage polarization involved in immune response","type":"exact"}],"termid":"GO:0002281"}


id: MONDO:0008630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary bladder, atony of","secondary_identifiers":["MEDGEN:1684829","UMLS:C5231389","OMIM:191800"],"synonyms":[{"name":"atony of urinary bladder","type":"exact"},{"name":"bladder dysfunction, autonomic, with impaired pupillary reflex and secondary CAKUT","type":"exact"},{"name":"urinary bladder, atony of","type":"exact"}],"termid":"MONDO:0008630","xrefs":{"Monarch":{"xref_id":"0008630"}}}


id: PBO:0047310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase","termid":"PBO:0047310"}


id: PBO:0049260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSC divergent transcript","termid":"PBO:0049260"}


id: PBO:0082761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; zinc cluster protein involved in pre-mRNA splicing and cycloheximide resistance","termid":"PBO:0082761"}


id: PBO:0058862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9500","termid":"PBO:0058862"}


id: MONDO:0016645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare neoplastic disease (obsolete MONDO:0016645)","secondary_identifiers":["Orphanet:250908"],"termid":"MONDO:0016645","xrefs":{"Monarch":{"xref_id":"0016645"}}}


id: PBO:0031819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_apoptosis","termid":"PBO:0031819"}


id: GO:0039603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Selective and non-covalent interaction of a viral protein with a member of the class of TATA-binding proteins (TBP) in the host, including any of the TBP-related factors (TRFs), which contributes to the viral-suppression of assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a host DNA template.","definition_xrefs":["PMID:11968006","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete TBP-class protein binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter (obsolete GO:0039603)","termid":"GO:0039603"}


id: GO:1902684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor localization to synapse.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22252129","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"negatively_regulates","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor localization to synapse","synonyms":[{"name":"down regulation of receptor localisation to synapse","type":"exact"},{"name":"down regulation of receptor localization to synapse","type":"exact"},{"name":"down-regulation of receptor localisation to synapse","type":"exact"},{"name":"down-regulation of receptor localization to synapse","type":"exact"},{"name":"downregulation of receptor localisation to synapse","type":"exact"},{"name":"downregulation of receptor localization to synapse","type":"exact"},{"name":"inhibition of receptor localisation to synapse","type":"narrow"},{"name":"inhibition of receptor localization to synapse","type":"narrow"},{"name":"negative regulation of receptor localisation to synapse","type":"exact"}],"termid":"GO:1902684"}


id: PR:O13771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glc8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.09c","synonyms":[{"name":"Spom972h-glc8","type":"exact"}],"termid":"PR:O13771"}


id: GO:0035502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The development of the portion of the ureteric bud tube that contributes to the morphogenesis of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"},{"relation_name":"part_of","term_name":"metanephros morphogenesis","termid":"GO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric part of ureteric bud development","termid":"GO:0035502"}


id: GO:0042786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating the host's antigen processing or presentation pathways, e.g. by blocking any stage in MHC class II presentation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion of host immune response via modulation of host antigen processing and presentation (obsolete GO:0042786)","synonyms":[{"name":"active evasion of host immune response via regulation of host antigen processing and presentation","type":"related"},{"name":"active evasion of host immune response via regulation of host antigen processing and presentation pathway","type":"exact"},{"name":"active evasion of immune response of other organism via regulation of antigen processing and presentation in other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of antigen processing and presentation","type":"exact"},{"name":"active immune evasion via modulation of antigen processing/presentation","type":"exact"},{"name":"active immune evasion via regulation of antigen processing and presentation","type":"exact"},{"name":"evasion of host immune response via regulation of host antigen processing and presentation","type":"exact"}],"termid":"GO:0042786"}


id: MONDO:0033203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"steroid-resistant nephrotic syndrome","termid":"MONDO:0044765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome 14","secondary_identifiers":["UMLS:C4540559","GARD:13818","MEDGEN:1617660","DOID:0080265","OMIM:617575","Orphanet:506334"],"synonyms":[{"name":"NPHS14","type":"related"},{"name":"RENI syndrome","type":"exact"},{"name":"SGPL1 deficiency, steroid-resistant nephrotic syndrome type 14","type":"exact"},{"name":"SPLIS","type":"exact"},{"name":"familial steroid-resistant nephrotic syndrome with adrenal insufficiency","type":"exact"},{"name":"nephrotic syndrome 14","type":"exact"},{"name":"nephrotic syndrome, type 14","type":"exact"},{"name":"primary adrenal insufficiency-steroid-resistant nephrotic syndrome due to SGPL1 deficiency","type":"exact"},{"name":"renal, endocrine, neurologic and immune syndrome","type":"exact"},{"name":"sphingosine phosphate lyase insufficiency syndrome","type":"exact"}],"termid":"MONDO:0033203","xrefs":{"Monarch":{"xref_id":"0033203"}}}


id: GO:0003720
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70227],"is_not":false,"summary":null,"term":"GO:0003720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1) using an internal RNA template that encodes the telomeric repeat sequence.","definition_xrefs":["GOC:krc","PMID:28732250","PMID:11812242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed DNA polymerase activity","termid":"GO:0003964"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0140097","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"telomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-164617","Reactome:R-HSA-163090"],"synonyms":[{"name":"telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"telomerase, catalyst","type":"exact"}],"termid":"GO:0003720","terms_by_termid":{"GO:0003720":null}}


id: GO:0031026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses glutamate synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamate synthase complex","termid":"GO:0031026"}


id: GO:0060721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of spongiotrophoblast cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in embryonic placenta development","termid":"GO:0060723"},{"relation_name":"regulates","term_name":"spongiotrophoblast cell proliferation","termid":"GO:0060720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spongiotrophoblast cell proliferation","termid":"GO:0060721"}


id: PBO:0067930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 232","termid":"PBO:0067930"}


id: PATO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's duration of exhibition of thermal energy.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duration of temperature","termid":"PATO:0001310"}


id: PBO:0049886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 5","termid":"PBO:0049886"}


id: PBO:0081624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 554","termid":"PBO:0081624"}


id: PBO:0017872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester transmembrane transporter (predicted)","termid":"PBO:0017872"}


id: PBO:0029847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_sister_chromatid_cohesion","termid":"PBO:0029847"}


id: FYPO:0005916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at tRNA genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleosome occupancy at tRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at tRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at tRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in tRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at tRNA genes","type":"exact"}],"termid":"FYPO:0005916"}


id: PBO:0042611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 11","termid":"PBO:0042611"}


id: PBO:0039363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-Mullerian hormone","termid":"PBO:0039363"}


id: GO:0044499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant increase of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:19837656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood pressure in another organism","termid":"GO:0044498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of blood pressure in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044499"}


id: GO:0031140
data:
  {"annotated_genes":["SJAG_03735","SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[115393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion upon starvation for one or more nutrients.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of conjugation with cellular fusion","termid":"GO:0010514"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_03735":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"induction of conjugation upon nutrient starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031140","terms_by_termid":{"GO:0031141":null,"GO:0031142":null}}


id: GO:0021841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons toward the signal, where this process is involved in migration from the subpallium to the cortex.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dph","PMID:12626695","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"positive chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021841"}


id: GO:0033459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"GAA codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033459"}


id: GO:0052667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-methylethanolamine phosphate + S-adenosyl-L-methionine = N,N-dimethylethanolamine phosphate + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphomethylethanolamine N-methyltransferase activity (obsolete GO:0052667)","synonyms":[{"name":"N-methylethanolamine phosphate N-methyltransferase activity","type":"exact"}],"termid":"GO:0052667"}


id: MONDO:0018619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperinsulinemic hypoglycaemia (obsolete MONDO:0018619)","termid":"MONDO:0018619","xrefs":{"Monarch":{"xref_id":"0018619"}}}


id: GO:0034211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"GTP dependent catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate.","definition_xrefs":["PMID:17200152","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0140096","GO:0004672","GO:0016740"],"is_obsolete":false,"name":"GTP-dependent protein kinase activity","termid":"GO:0034211"}


id: GO:0014021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the neural tube by coalescence of mesenchymal cells followed by their conversion to epithelial cells to form a solid cord that subsequently hollows out (cavitates) to create a hollow tube. Secondary neurulation is the typical mechanism of formation of the neural tube posterior to the posterior neuropore in mammals.","definition_xrefs":["GOC:ef","ISBN:0878932585","PMID:15327780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"neural tube formation","termid":"GO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary neural tube formation","secondary_identifiers":["GO:0014026","GO:0014027"],"synonyms":[{"name":"medullary cord biosynthesis","type":"exact"},{"name":"medullary cord formation","type":"exact"},{"name":"medullary rod cavitation","type":"related"},{"name":"neural rod formation","type":"related"},{"name":"secondary neural tube rod cavitation","type":"related"},{"name":"secondary neurulation","type":"exact"}],"termid":"GO:0014021"}


id: PBO:0030491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malate_import","termid":"PBO:0030491"}


id: PBO:0026931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_oscillating_nucleus","termid":"PBO:0026931"}


id: SO:0000563
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 12 or 23 nucleotide spacer between two regions of an immunoglobulin/T-cell receptor gene that may be rearranged by recombinase.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene_recombination_spacer","synonyms":[{"name":"vertebrate immune system gene recombination spacer","type":"exact"}],"termid":"SO:0000563"}


id: PBO:0067507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 647, pseudogene","termid":"PBO:0067507"}


id: PBO:0009256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ARPC3","termid":"PBO:0009256"}


id: GO:0006606
data:
  {"annotated_genes":["SJAG_02425","SJAG_01449","SJAG_01834","SJAG_00471","SJAG_01065","SJAG_03300","SJAG_03470","SJAG_01374","SJAG_01185","SJAG_00065","SJAG_00093","SJAG_03729","SJAG_03002","SJAG_00375","SJAG_03453","SJAG_01328","SJAG_00383","SJAG_01909","SJAG_01621","SJAG_01584","SJAG_04366","SJAG_02520","SJAG_03907","SJAG_02757","SJAG_03693","SJAG_03959","SJAG_01789","SJAG_04148","SJAG_01013","SJAG_03593","SJAG_04411","SJAG_04645","SJAG_01083","SJAG_02592","SJAG_00840","SJAG_02210","SJAG_00968","SJAG_01655","SJAG_03986","SJAG_03048","SJAG_01311","SJAG_02998","SJAG_02274","SJAG_03662","SJAG_00586","SJAG_03299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59993,65938,69707,70025,70530,71027,71086,71241,72350,72428,72552,72748,73288,73432,73783,73798,74088,74816,75200,75449,75490,76082,77619,78225,79436,79800,79990,80117,88659,93746,94045,95886,97604,104856,106134,115611],"is_not":false,"summary":null,"term":"GO:0006606"},{"annotations":[105613],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042308"},{"annotations":[73310,75840,72854,74483,76780,100940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006607"},{"annotations":[102173,90604,94131],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"The directed movement of a protein from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"},{"relation_name":"is_a","term_name":"import into nucleus","termid":"GO:0051170"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00065":null,"SJAG_00093":null,"SJAG_00375":null,"SJAG_00383":null,"SJAG_00471":null,"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01311":null,"SJAG_01328":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01584":null,"SJAG_01621":null,"SJAG_01655":null,"SJAG_01789":null,"SJAG_01834":null,"SJAG_01909":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02592":null,"SJAG_02757":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03048":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03453":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03907":null,"SJAG_03959":null,"SJAG_03986":null,"SJAG_04148":null,"SJAG_04366":null,"SJAG_04411":null,"SJAG_04645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein import into nucleus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localization to nucleus","type":"exact"},{"name":"protein import into cell nucleus","type":"exact"},{"name":"protein nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus","type":"exact"}],"termid":"GO:0006606","terms_by_termid":{"GO:0006606":null,"GO:0006607":null,"GO:0042307":null,"GO:0042308":null}}


id: PBO:0004540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog","termid":"PBO:0004540"}


id: GO:1902441
data:
  {"annotated_genes":["SJAG_02529","SJAG_03915","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91052,96642,113735],"is_not":false,"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle pole body.","definition_xrefs":["PMID:20833892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle pole body organization","termid":"GO:1990395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02529":null,"SJAG_03915":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0007049","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to meiotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990954","GO:1990945"],"synonyms":[{"name":"establishment of protein localization to meiotic spindle pole body","type":"narrow"},{"name":"protein localisation in meiotic spindle pole body","type":"exact"},{"name":"protein localisation to meiotic spindle pole body","type":"exact"},{"name":"protein localization in meiotic spindle pole body","type":"exact"},{"name":"protein location to meiotic spindle pole body","type":"exact"}],"termid":"GO:1902441","terms_by_termid":{"GO:1902441":null}}


id: GO:0048331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the axial mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"axial mesoderm morphogenesis","termid":"GO:0048319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm structural organization","synonyms":[{"name":"axial mesoderm structural organisation","type":"exact"}],"termid":"GO:0048331"}


id: GO:2000078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic B cell development.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell development","termid":"GO:2000074"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell development","termid":"GO:0003323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell development","synonyms":[{"name":"positive regulation of pancreatic B cell development","type":"exact"},{"name":"positive regulation of pancreatic beta cell development","type":"exact"}],"termid":"GO:2000078"}


id: PBO:0034154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-innervates","termid":"PBO:0034154"}


id: GO:1905598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of low-density lipoprotein receptor activity.","definition_xrefs":["GOC:TermGenie","GOC:nc","GO_REF:0000059","PMID:22848640","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"negative regulation of receptor-mediated endocytosis","termid":"GO:0048261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of low-density lipoprotein receptor activity","synonyms":[{"name":"down regulation of LDL receptor","type":"exact"},{"name":"down regulation of LDLR activity","type":"exact"},{"name":"down regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"down-regulation of LDL receptor","type":"exact"},{"name":"down-regulation of LDLR activity","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"downregulation of LDL receptor","type":"exact"},{"name":"downregulation of LDLR activity","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"inhibition of LDL receptor","type":"narrow"},{"name":"inhibition of LDLR activity","type":"narrow"},{"name":"inhibition of low-density lipoprotein receptor activity","type":"narrow"},{"name":"negative regulation of LDL receptor","type":"exact"},{"name":"negative regulation of LDLR activity","type":"exact"}],"termid":"GO:1905598"}


id: PBO:0051150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30-3","termid":"PBO:0051150"}


id: GO:0061105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"stomach neuroendocrine cell differentiation","termid":"GO:0061102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061105"}


id: PBO:0111315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PRR repeat protein, implicated in mitochondrial gene expression","termid":"PBO:0111315"}


id: GO:0042400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["GOC:jl","PMID:11823218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectoine metabolic process","termid":"GO:0042399"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"ectoine catabolic process","synonyms":[{"name":"ectoine breakdown","type":"exact"},{"name":"ectoine catabolism","type":"exact"},{"name":"ectoine degradation","type":"exact"}],"termid":"GO:0042400"}


id: PR:Q9US28
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1783.01 gene.","definition_xrefs":["UniProtKB:Q9US28","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C1783.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.01","synonyms":[{"name":"Spom972h-SPAC1783.01","type":"exact"}],"termid":"PR:Q9US28"}


id: GO:0015330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glutamine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity glutamine transmembrane transporter activity","synonyms":[{"name":"high affinity glutamine permease activity","type":"related"},{"name":"high affinity glutamine transmembrane transporter activity","type":"exact"}],"termid":"GO:0015330"}


id: GO:0061598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction ATP + molybdopterin = diphosphate + adenylyl-molybdopterin.","definition_xrefs":["EC:2.7.7.75","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"molybdopterin adenylyltransferase activity","secondary_identifiers":["RHEA:31331"],"termid":"GO:0061598"}


id: GO:0019220
data:
  {"annotated_genes":["SJAG_00685","SJAG_02380","SJAG_01402","SJAG_00053","SJAG_02785","SJAG_03940","SJAG_01187","SJAG_03170","SJAG_01906","SJAG_02613","SJAG_04422","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90163,104165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[72758,75754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[111170,115287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[112545,109530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[117345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[89439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[74830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"},{"annotations":[69732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[117815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[75753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00685":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_02613":null,"SJAG_02785":null,"SJAG_03170":null,"SJAG_03940":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phosphate metabolism","type":"exact"}],"termid":"GO:0019220","terms_by_termid":{"GO:0006110":null,"GO:0010510":null,"GO:0043456":null,"GO:0045820":null,"GO:0071072":null,"GO:1902647":null,"GO:1902648":null,"GO:1905706":null,"GO:1905857":null,"GO:2001211":null}}


id: GO:0106097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ceramide stimulus.","definition_xrefs":["PMID:18006463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ceramide","termid":"GO:0106097"}


id: PBO:0051726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor 2A","termid":"PBO:0051726"}


id: PBO:0059890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 13","termid":"PBO:0059890"}


id: PR:O14155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0047 protein YjbQ that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01063","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0047 protein C4A8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.02c","secondary_identifiers":["UniProtKB:O14155"],"synonyms":[{"name":"Spom972h-yjbQ","type":"exact"}],"termid":"PR:O14155"}


id: GO:0060143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"positively_regulates","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060143"}


id: GO:2000474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opioid receptor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of opioid receptor signaling pathway","synonyms":[{"name":"regulation of opioid receptor signalling pathway","type":"exact"}],"termid":"GO:2000474"}


id: PBO:0015655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3102","termid":"PBO:0015655"}


id: SO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase I binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_I_promoter","synonyms":[{"name":"RNA polymerase A promoter","type":"exact"},{"name":"RNApol I promoter","type":"exact"},{"name":"pol I promoter","type":"exact"},{"name":"polymerase I promoter","type":"exact"}],"termid":"SO:0000169"}


id: GO:0060361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air, usually by means of active wing movement.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight","termid":"GO:0060361"}


id: PBO:0054634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2039","termid":"PBO:0054634"}


id: PBO:0084475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA2","termid":"PBO:0084475"}


id: PBO:0091970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside transmembrane transporter","termid":"PBO:0091970"}


id: GO:0019964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to type II interferon, also known as interferon-gamma.","definition_xrefs":["GOC:ai","PMID:15546383","GOC:add","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon binding","termid":"GO:0019961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type II interferon binding","synonyms":[{"name":"IFN-gamma binding","type":"exact"},{"name":"IFNG binding","type":"exact"},{"name":"interferon-gamma binding","type":"broad"}],"termid":"GO:0019964"}


id: MONDO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of uterine corpus leiomyoma characterized by significant cytologic atypia. The atypical cells are large with pleomophic hyperchromatic nuclei.","definition_xrefs":["NCIT:C40167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bizarre leiomyoma","termid":"MONDO:0003288"},{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus bizarre leiomyoma","secondary_identifiers":["DOID:13958","MEDGEN:275555","UMLS:C1519853"],"synonyms":[{"name":"bizarre leiomyoma of body of uterus","type":"exact"},{"name":"body of uterus bizarre leiomyoma","type":"exact"},{"name":"uterine corpus Symplastic leiomyoma","type":"exact"},{"name":"uterine corpus bizarre leiomyoma","type":"exact"},{"name":"uterine corpus leiomyoma with bizarre nuclei","type":"exact"},{"name":"uterine corpus leiomyoma, atypical variant","type":"exact"}],"termid":"MONDO:0001846","xrefs":{"Monarch":{"xref_id":"0001846"}}}


id: PBO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha6","termid":"PBO:0048202"}


id: GO:0042492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemopoietic cell acquires specialized features of a gamma-delta T cell. A gamma-delta T cell is a T cell that expresses a gamma-delta T cell receptor complex.","definition_xrefs":["CL:0000798","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"},{"relation_name":"is_a","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell differentiation","synonyms":[{"name":"gamma-delta T cell development","type":"related"},{"name":"gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"gamma-delta T-cell differentiation","type":"exact"},{"name":"gamma-delta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0042492"}


id: SO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A base-paired stem with loop of 4 non-hydrogen bonded nucleotides.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem_loop","termid":"SO:0000313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraloop","secondary_identifiers":["http://en.wikipedia.org/wiki/Tetraloop"],"termid":"SO:0001008"}


id: MOD:01162
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"fucosylated biantennary","synonyms":[{"name":"Fucosylated biantennary","type":"related"},{"name":"dHex(1)Hex(5)HexNAc(4)","type":"related"}],"termid":"MOD:01162"}


id: PBO:0086596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced in cells treated with mycotoxins patulin or citrinin; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086596"}


id: PBO:0049795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperpolarization activated cyclic nucleotide gated potassium channel 1","termid":"PBO:0049795"}


id: GO:0106409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',3'-c-di-AMP + H2O = 5'-O-phosphonoadenylyl-(3'-5')-adenosine + H+.","definition_xrefs":["RHEA:54420","PMID:21909268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cyclic-di-AMP phosphodiesterase activity","secondary_identifiers":["EC:3.1.4.59","MetaCyc:RXN-19814"],"termid":"GO:0106409"}


id: PBO:0031729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_recombination","termid":"PBO:0031729"}


id: PBO:0026951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_transcript_level","termid":"PBO:0026951"}


id: PBO:0070755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 11","termid":"PBO:0070755"}


id: GO:0039009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the rectal diverticulum over time, from its formation to the mature structure. The rectal diverticulum is an outgrowth of the cloaca and links the pronephric kidney to the exterior.","definition_xrefs":["PMID:18226983","PMID:10535314","XAO:0001015","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rectal diverticulum development","synonyms":[{"name":"pronephric rectal diverticulum development","type":"exact"}],"termid":"GO:0039009"}


id: PR:O94342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tgp1 gene.","definition_xrefs":["UniProtKB:O94342","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolite transport protein C1271.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.09","synonyms":[{"name":"Spom972h-tgp1","type":"exact"}],"termid":"PR:O94342"}


id: PBO:0054223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1605","termid":"PBO:0054223"}


id: PBO:0029235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cellular_response_to_salt_stress","termid":"PBO:0029235"}


id: GO:0018861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoate + CoA + ATP = 4-chlorobenzoyl-CoA + AMP + diphosphate. This reaction requires magnesium and is part of the bacterial 2,4-dichlorobenzoate degradation pathway.","definition_xrefs":["EC:6.2.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"4-chlorobenzoate-CoA ligase activity","secondary_identifiers":["RHEA:23220","UM-BBD_reactionID:r0139","MetaCyc:6.2.1.33-RXN","KEGG_REACTION:R03932"],"synonyms":[{"name":"4-chlorobenzoate:CoA ligase activity","type":"exact"}],"termid":"GO:0018861"}


id: PBO:0005755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt3 (predicted)","termid":"PBO:0005755"}


id: PBO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3m","termid":"PBO:0000321"}


id: MONDO:0015945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Polymalformative genetic syndrome with increased risk of developing cancer (PGSIRC) comprises a wide range of syndromes characterized by congenital malformations with a high risk of developing tumors including up to 50 different rare diseases.","definition_xrefs":["Orphanet:183422"],"gene_count":0,"genotype_count":0,"name":"obsolete polymalformative genetic syndrome with increased risk of developing cancer (obsolete MONDO:0015945)","synonyms":[{"name":"PGSIRC","type":"exact"}],"termid":"MONDO:0015945","xrefs":{"Monarch":{"xref_id":"0015945"}}}


id: GO:1990573
data:
  {"annotated_genes":["SJAG_01353","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70222,72020],"is_not":false,"summary":null,"term":"GO:1990573"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:9139127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"potassium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0010107"],"synonyms":[{"name":"potassium import","type":"broad"},{"name":"potassium ion import","type":"broad"},{"name":"potassium ion uptake","type":"broad"}],"termid":"GO:1990573","terms_by_termid":{"GO:1990573":null}}


id: GO:0120539
data:
  {"annotated_genes":["SJAG_00721"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89381],"is_not":false,"summary":null,"term":"GO:0120539"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 4-hydroxy-3-methoxy-5-(all-trans-polyprenyl)benzoate + H+ = a 2-methoxy-6-(all-trans-polyprenyl)phenol + CO2.","definition_xrefs":["PMID:38425362","PMID:38295803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120539","terms_by_termid":{"GO:0120539":null}}


id: PBO:0083295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene PNO1/YOR145C","termid":"PBO:0083295"}


id: PBO:0057957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-1","termid":"PBO:0057957"}


id: PBO:0004529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine (K) and glutamic acid (E) Rich protein","termid":"PBO:0004529"}


id: PBO:0063475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 3 pseudogene 2","termid":"PBO:0063475"}


id: MONDO:0002177
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495","SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86247,86248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[86576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"}]},"cv_name":"mondo","definition":"Abnormally high levels of insulin in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03266":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"hyperinsulinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2018","UMLS:C0020459","ICD9:251.1","MESH:D006946","SCTID:83469008","MEDGEN:43779","HP:0000842"],"synonyms":[{"name":"hyperinsulinemia","type":"exact"},{"name":"hyperinsulinism","type":"exact"},{"name":"hyperinsulinism (disease)","type":"exact"}],"termid":"MONDO:0002177","terms_by_termid":{"MONDO:0011236":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0002177"}}}


id: GO:1900249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytoplasmic translational elongation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"positively_regulates","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytoplasmic translational elongation","synonyms":[{"name":"activation of cytoplasmic translational elongation","type":"narrow"},{"name":"up regulation of cytoplasmic translational elongation","type":"exact"},{"name":"up-regulation of cytoplasmic translational elongation","type":"exact"},{"name":"upregulation of cytoplasmic translational elongation","type":"exact"}],"termid":"GO:1900249"}


id: MONDO:0010011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schizencephaly is a rare congenital cerebral malformation characterized by the presence of linear clefts in one or both hemispheres of the brain, extending from the lateral ventricles to the pial surface of the cortex, and that lead to a variety of neurological symptoms such as epilepsy, motor deficits, and psychomotor retardation.","definition_xrefs":["Orphanet:799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"encephaloclastic disorder","termid":"MONDO:0017103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"schizencephaly","secondary_identifiers":["NANDO:1201073","NANDO:2200818","MEDGEN:78606","ICD9:742.4","NCIT:C99056","OMIM:269160","UMLS:C0266484","SCTID:253159001","GARD:166","MESH:D065707","icd11.foundation:1693546163"],"synonyms":[{"name":"schizencephaly","type":"exact"}],"termid":"MONDO:0010011","xrefs":{"Monarch":{"xref_id":"0010011"}}}


id: PATO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000476 bad value (obsolete PATO:0000476)","termid":"PATO:0000476"}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["RHEA:25597","EC:4.2.99.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["KEGG_REACTION:R08166","MetaCyc:RXN-9310"],"synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"},{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"}],"termid":"GO:0070205"}


id: GO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the tridecapeptide neurotensin to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state.","definition_xrefs":["PMID:10390649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotensin receptor activity","synonyms":[{"name":"G protein coupled neurotensin receptor activity","type":"exact"},{"name":"G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"neurotensin receptor activity, G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0016492"}


id: PBO:0055938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 45","termid":"PBO:0055938"}


id: MONDO:0016702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade II tumor composed of a conspicuous mixture of two distinct neoplastic cell types morphologically resembling the tumor cells in oligodendroglioma and diffuse astrocytoma. (WHO)","definition_xrefs":["NCIT:C4050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed glioma","termid":"MONDO:0003268"},{"relation_name":"is_a","term_name":"grade II glioma","termid":"MONDO:0021639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligoastrocytoma","secondary_identifiers":["SCTID:716647001","DOID:7912","EFO:0000630","GARD:9769","MEDGEN:154285","ONCOTREE:OAST","Orphanet:251656","MedDRA:10027744","MESH:D009837","UMLS:C0547065"],"synonyms":[{"name":"MOA","type":"exact"},{"name":"WHO grade II mixed glioma","type":"exact"},{"name":"glioma, mixed, benign","type":"exact"},{"name":"mixed astrocytic-oligodendroglial neoplasm","type":"exact"},{"name":"mixed astrocytic-oligodendroglial tumor","type":"exact"},{"name":"mixed astrocytic-oligodendroglial tumour","type":"exact"},{"name":"mixed astrocytoma-oligodendroglioma","type":"exact"},{"name":"mixed oligo-astrocytoma","type":"exact"},{"name":"mixed oligoastrocytoma","type":"exact"},{"name":"mixed oligodendroglioma-astrocytoma","type":"exact"},{"name":"oligoastrocytoma","type":"exact"}],"termid":"MONDO:0016702","xrefs":{"Monarch":{"xref_id":"0016702"}}}


id: MONDO:0100439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease in which the cause of the disease is a mutation in the PHKA2 gene, with no PHK in liver, but normal activity in erythrocytes.","definition_xrefs":["OMIM:306000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease IXa2","secondary_identifiers":["UMLS:C2748941","MEDGEN:411335"],"synonyms":[{"name":"GSD IXa2","type":"exact"},{"name":"GSD9A2","type":"exact"},{"name":"liver glycogenosis, X-linked, type 2","type":"exact"}],"termid":"MONDO:0100439","xrefs":{"Monarch":{"xref_id":"0100439"}}}


id: MONDO:0033170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"statin toxicity","secondary_identifiers":["Orphanet:413696"],"termid":"MONDO:0033170","xrefs":{"Monarch":{"xref_id":"0033170"}}}


id: PBO:0056553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 3","termid":"PBO:0056553"}


id: FYPO:0008166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome does not occur during prometaphase of mitosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008166"}


id: GO:1901439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toluene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of toluene metabolic process","termid":"GO:1901437"},{"relation_name":"positively_regulates","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of toluene metabolic process","synonyms":[{"name":"activation of methylbenzene metabolic process","type":"exact"},{"name":"activation of methylbenzene metabolism","type":"exact"},{"name":"activation of toluene metabolic process","type":"narrow"},{"name":"activation of toluene metabolism","type":"exact"},{"name":"positive regulation of methylbenzene metabolic process","type":"exact"},{"name":"positive regulation of methylbenzene metabolism","type":"exact"},{"name":"positive regulation of toluene metabolism","type":"exact"},{"name":"up regulation of methylbenzene metabolic process","type":"exact"},{"name":"up regulation of methylbenzene metabolism","type":"exact"},{"name":"up regulation of toluene metabolic process","type":"exact"},{"name":"up regulation of toluene metabolism","type":"exact"},{"name":"up-regulation of methylbenzene metabolic process","type":"exact"},{"name":"up-regulation of methylbenzene metabolism","type":"exact"},{"name":"up-regulation of toluene metabolic process","type":"exact"},{"name":"up-regulation of toluene metabolism","type":"exact"},{"name":"upregulation of methylbenzene metabolic process","type":"exact"},{"name":"upregulation of methylbenzene metabolism","type":"exact"},{"name":"upregulation of toluene metabolic process","type":"exact"},{"name":"upregulation of toluene metabolism","type":"exact"}],"termid":"GO:1901439"}


id: PBO:0087453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex with Ctf8p; shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint","termid":"PBO:0087453"}


id: GO:0160163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + S-nitrosoglutathione = NADP+ + S-(hydroxysulfenamide)glutathione.","definition_xrefs":["RHEA:63500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"S-nitrosoglutathione reductase (NADPH) activity","termid":"GO:0160163"}


id: PR:Q09721
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC31A2.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31A2.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.10","synonyms":[{"name":"Spom972h-SPAC31A2.10","type":"exact"}],"termid":"PR:Q09721"}


id: MONDO:0017953
data:
  {"annotated_genes":["SJAG_00321","SJAG_04865","SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[86505,86504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[84827,84828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"}]},"cv_name":"mondo","definition":"An instance of periodic fever syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodic fever syndrome","termid":"MONDO:0015137"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary periodic fever syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D056660","GARD:21453","MEDGEN:199651","Orphanet:324924","UMLS:C0751422"],"synonyms":[{"name":"hereditary periodic fever syndrome","type":"exact"}],"termid":"MONDO:0017953","terms_by_termid":{"MONDO:0009849":null,"MONDO:0012481":null,"MONDO:0013766":null},"xrefs":{"Monarch":{"xref_id":"0017953"}}}


id: PBO:0058454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5093","termid":"PBO:0058454"}


id: PR:O14099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.16 gene.","definition_xrefs":["UniProtKB:O14099","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C2F3.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.16","synonyms":[{"name":"Spom972h-SPAC2F3.16","type":"exact"}],"termid":"PR:O14099"}


id: FYPO:0003527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the cell tip is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to cell tip","synonyms":[{"name":"ectopic protein localization to cell tip","type":"exact"},{"name":"protein mislocalised to cell tip","type":"exact"},{"name":"protein mislocalised to cell tip during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell end","type":"exact"},{"name":"protein mislocalized to cell tip during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003527"}


id: PBO:0069796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1082, pseudogene","termid":"PBO:0069796"}


id: GO:0004665
data:
  {"annotated_genes":["SJAG_04652"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67299],"is_not":false,"summary":null,"term":"GO:0004665"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + prephenate = (4-hydroxyphenyl)pyruvate + CO2 + NADPH.","definition_xrefs":["EC:1.3.1.13","RHEA:21640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"prephenate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:PREPHENATE-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R01730"],"synonyms":[{"name":"prephenate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"prephenate:NADP+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0004665","terms_by_termid":{"GO:0004665":null}}


id: GO:0007010
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id: FYPO:0003730
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on galactose carbon source","termid":"FYPO:0000251"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell population growth on galactose carbon source","synonyms":[{"name":"abolished galactose utilization","type":"related"},{"name":"abolished growth on galactose carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on galactose carbon source","type":"exact"},{"name":"cell population growth on galactose carbon source abolished","type":"exact"}],"termid":"FYPO:0003730"}


id: GO:0033051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aminophosphonates, phosphonic acid derivatives that contain an amino group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminophosphonate metabolic process","secondary_identifiers":["KEGG_PATHWAY:map00440"],"synonyms":[{"name":"aminophosphonate metabolism","type":"exact"}],"termid":"GO:0033051"}


id: RO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"holds between two entities when some genome-level process such as gene expression is involved. This includes transcriptional, spliceosomal events. These relations can be used between either macromolecule entities (such as regions of nucleic acid) or between their abstract informational counterparts.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_related_to","termid":"RO:0002330"}


id: PBO:0039201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 4","termid":"PBO:0039201"}


id: FYPO:0005649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the telomere of a chromosome is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of protein localization to telomere","synonyms":[{"name":"increased duration of protein localisation to telomere","type":"exact"},{"name":"increased duration of protein localization to chromosome, telomeric region","type":"exact"},{"name":"increased duration of protein localization to telomere during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to telomere during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to telomeric region","type":"exact"},{"name":"prolonged protein localization to telomere","type":"exact"}],"termid":"FYPO:0005649"}


id: MONDO:0020538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant dysgerminomatous germ cell tumor of ovary is the most common form of malignant germ cell tumor of ovary, arising from germ cells in the ovary, usually presenting during adolescence with pelvic mass, fever, vaginal bleeding, and acute abdomen and is characterized by bilaterality (around 10% of cases), association with dysgenetic gonads (5 to 10% of cases), elevated serum lactate dehydrogenase (LDH) and human chorionic gonadotrophin (hCG) (in the presence of syncitiotrophoblasts). Malignant dysgerminomatous germ cell tumor of ovary responds well to chemotherapy, potentially sparing patients from infertility and early mortality.","definition_xrefs":["Orphanet:99912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant dysgerminomatous germ cell tumor of ovary","secondary_identifiers":["GARD:19705"],"synonyms":[{"name":"dysgerminomatous germ cell cancer of ovary","type":"exact"},{"name":"dysgerminomatous germ cell cancer of the ovary","type":"exact"},{"name":"malignant dysgerminomatous germ cell tumor of the ovary","type":"related"},{"name":"malignant dysgerminomatous germ cell tumour of the ovary","type":"related"},{"name":"malignant ovarian dysgerminoma","type":"exact"}],"termid":"MONDO:0020538","xrefs":{"Monarch":{"xref_id":"0020538"}}}


id: PBO:0030825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h+_cells","termid":"PBO:0030825"}


id: GO:1990482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucuronate + inositol phosphorylceramide (IPC) = UDP + GlcA-IPC.","definition_xrefs":["PMID:25122154","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"sphingolipid alpha-glucuronosyltransferase activity","synonyms":[{"name":"inositol phosphorylceramide glucuronosyltransferase activity","type":"related"}],"termid":"GO:1990482"}


id: PBO:0068405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 224","termid":"PBO:0068405"}


id: GO:1903395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary cell septum biogenesis.","definition_xrefs":["GO_REF:0000058","PMID:23878277","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"secondary cell septum biogenesis","termid":"GO:1990344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"regulation of secondary cell septum biogenesis","termid":"GO:1903395"}


id: GO:2000448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage migration inhibitory factor signaling pathway","termid":"GO:2000446"},{"relation_name":"positively_regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"positive regulation of MIF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000448"}


id: GO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of left cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left ventricular cardiac muscle tissue morphogenesis","synonyms":[{"name":"left ventricular myocardium morphogenesis","type":"exact"}],"termid":"GO:0003220"}


id: GO:0019468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of nopaline (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete nopaline catabolic process (obsolete GO:0019468)","synonyms":[{"name":"nopaline breakdown","type":"exact"},{"name":"nopaline catabolism","type":"exact"},{"name":"nopaline degradation","type":"exact"}],"termid":"GO:0019468"}


id: PBO:0066558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 21","termid":"PBO:0066558"}


id: SO:0001287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5,2'-O-dimethylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_two_prime_O_dimethylcytidine","secondary_identifiers":["RNAMOD:026"],"synonyms":[{"name":"5,2'-O-dimethylcytidine","type":"exact"},{"name":"five two prime O dimethylcytidine","type":"exact"},{"name":"m5Cm","type":"exact"}],"termid":"SO:0001287"}


id: PBO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sh3 Homology Domain","termid":"PBO:0002081"}


id: PBO:0062673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily A member 2","termid":"PBO:0062673"}


id: GO:0043821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + propionyl-CoA = succinyl-CoA + propionate.","definition_xrefs":["PMID:10769117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"propionyl-CoA:succinate CoA-transferase activity","secondary_identifiers":["MetaCyc:RXN0-268","RHEA:28010"],"synonyms":[{"name":"propionyl-CoA succinate CoA-transferase activity","type":"exact"},{"name":"propionyl-CoA:succinate CoA transferase activity","type":"exact"}],"termid":"GO:0043821"}


id: GO:0034369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a plasma lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the esterification of cholesterol by phosphatidylcholine-sterol O-acyltransferase (lecithin cholesterol acyltransferase; LCAT).","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex remodeling","termid":"GO:0034368"},{"relation_name":"is_a","term_name":"plasma lipoprotein particle organization","termid":"GO:0071827"},{"relation_name":"part_of","term_name":"regulation of plasma lipoprotein particle levels","termid":"GO:0097006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle remodeling","secondary_identifiers":["Reactome:R-HSA-8963899"],"synonyms":[{"name":"plasma lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034369"}


id: MONDO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant soft tissue neoplasm that arises from the trachea.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal cancer","termid":"MONDO:0001407"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"trachea sarcoma","secondary_identifiers":["UMLS:C1336774","MEDGEN:237016","NCIT:C6050","DOID:12002"],"synonyms":[{"name":"sarcoma of the trachea","type":"exact"},{"name":"sarcoma of trachea","type":"exact"},{"name":"trachea sarcoma","type":"exact"},{"name":"tracheal sarcoma","type":"exact"}],"termid":"MONDO:0001418","xrefs":{"Monarch":{"xref_id":"0001418"}}}


id: PBO:0081096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 21","termid":"PBO:0081096"}


id: PBO:0045006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 1","termid":"PBO:0045006"}


id: PBO:0066380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin","termid":"PBO:0066380"}


id: PBO:0053038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 1, translational regulator","termid":"PBO:0053038"}


id: PBO:0043399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemerin chemokine-like receptor 2","termid":"PBO:0043399"}


id: PBO:0040852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S5-TXNDC5 readthrough (NMD candidate)","termid":"PBO:0040852"}


id: GO:0043426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Myogenic Regulatory Factor (MRF), a member of the basic Helix-Loop-Helix (bHLH) superfamily of transcription factors.","definition_xrefs":["PMID:10966875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bHLH transcription factor binding","termid":"GO:0043425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MRF binding","secondary_identifiers":["GO:0051576","GO:0051579","GO:0051578","GO:0051577"],"synonyms":[{"name":"Mrf4 binding","type":"narrow"},{"name":"Myf5 binding","type":"narrow"},{"name":"MyoD binding","type":"narrow"},{"name":"myogenin binding","type":"narrow"}],"termid":"GO:0043426"}


id: GO:0000919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assembly, maturation, and growth of the cell plate to the cell periphery in cells that divide by cell plate formation; often involves deposition of cell wall material in and around the phragmoplast.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"cytokinesis by cell plate formation","termid":"GO:0000911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell plate assembly","synonyms":[{"name":"cell plate formation","type":"related"}],"termid":"GO:0000919"}


id: PBO:0075159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 15","termid":"PBO:0075159"}


id: GO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an AV node cell to an bundle of His cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"AV node cell-bundle of His cell adhesion involved in cell communication","synonyms":[{"name":"atrioventricular node cell-bundle of His cell adhesion involved in cell communication","type":"exact"}],"termid":"GO:0086072"}


id: FYPO:0008321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation does not occur when cells are subject to nitrogen starvation","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished sporulation","termid":"FYPO:0000583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished sporulation during nitrogen starvation","termid":"FYPO:0008321"}


id: GO:0097673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is YLR224W in S. cerevisiae.","definition_xrefs":["GOC:vw","PMID:25982115","GOC:jd","PMID:14747994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Ucc1 ubiquitin ligase complex","synonyms":[{"name":"SCF-YLR224W ubiquitin ligase complex","type":"exact"}],"termid":"GO:0097673"}


id: GO:0036108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate, a precursor of 4-amino-4-deoxy-L-arabinose (L-Ara4N).","definition_xrefs":["PMID:15695810","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process","termid":"GO:0036107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process","synonyms":[{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate anabolism","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthesis","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate formation","type":"exact"},{"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate synthesis","type":"exact"},{"name":"undecaprenyl phosphate alpha-L-Ara4N biosynthesis","type":"exact"}],"termid":"GO:0036108"}


id: PBO:0067620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 792, pseudogene","termid":"PBO:0067620"}


id: MOD:00514
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex HexNAc","definition_xrefs":["PubMed:5490222","RESID:AA0151#var","PubMed:1694179","Unimod:146","PubMed:111247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1dHex1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)dHex(1)","type":"related"},{"name":"Hex1HexNAc1dHex1","type":"related"}],"termid":"MOD:00514"}


id: GO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to scavenger receptors, a family of proteins that are expressed on myeloid cells and are involved in the uptake of effete cellular components and foreign particles.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"scavenger receptor binding","synonyms":[{"name":"scavenger receptor ligand","type":"narrow"}],"termid":"GO:0005124"}


id: GO:1903303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of pyruvate kinase activity.","definition_xrefs":["GOC:mr","GO_REF:0000059","PMID:15804508","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pyruvate kinase activity (obsolete GO:1903303)","synonyms":[{"name":"down regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"down regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"down regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"down regulation of pyruvate kinase activity","type":"exact"},{"name":"down-regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"down-regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"down-regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"down-regulation of pyruvate kinase activity","type":"exact"},{"name":"downregulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"downregulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"downregulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"downregulation of pyruvate kinase activity","type":"exact"},{"name":"inhibition of ATP:pyruvate 2-O-phosphotransferase activity","type":"narrow"},{"name":"inhibition of phosphoenol transphosphorylase activity","type":"narrow"},{"name":"inhibition of phosphoenolpyruvate kinase activity","type":"narrow"},{"name":"inhibition of pyruvate kinase activity","type":"narrow"},{"name":"negative regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"negative regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"negative regulation of phosphoenolpyruvate kinase activity","type":"exact"}],"termid":"GO:1903303"}


id: PBO:0079246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 21A","termid":"PBO:0079246"}


id: GO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent modification of peptidyl-lysine by biotin to form peptidyl-N6-biotinyl-L-lysine.","definition_xrefs":["RESID:AA0117"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine biotinylation (obsolete GO:0018054)","termid":"GO:0018054"}


id: PR:O59716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.08 gene.","definition_xrefs":["UniProtKB:O59716","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B8.8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.08","synonyms":[{"name":"Spom972h-SPBC3B8.08","type":"exact"}],"termid":"PR:O59716"}


id: PBO:0076850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis associated actin remodelling kinase 2","termid":"PBO:0076850"}


id: PATO:0020000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual based upon genotypic composition of sex chromosomes.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological sex","termid":"PATO:0000047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotypic sex","termid":"PATO:0020000"}


id: MONDO:0018783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblastic rheumatism","secondary_identifiers":["ICD9:729.0","UMLS:C1302753","icd11.foundation:112300601","GARD:21958","MEDGEN:724307","Orphanet:477650","SCTID:399964004"],"termid":"MONDO:0018783","xrefs":{"Monarch":{"xref_id":"0018783"}}}


id: PBO:0067101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 143, pseudogene","termid":"PBO:0067101"}


id: MONDO:0014534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microlissencephaly in which the cause of the disease is a mutation in the KATNB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 6 with microcephaly","secondary_identifiers":["MEDGEN:863962","UMLS:C4015525","OMIM:616212","DOID:0112236"],"synonyms":[{"name":"KATNB1 Microlissencephaly","type":"exact"},{"name":"KATNB1 microlissencephaly","type":"exact"},{"name":"LIS6","type":"related"},{"name":"Microlissencephaly caused by mutation in KATNB1","type":"exact"},{"name":"lissencephaly 6 with microcephaly","type":"exact"},{"name":"lissencephaly 6, with microcephaly","type":"exact"},{"name":"microlissencephaly caused by mutation in KATNB1","type":"exact"}],"termid":"MONDO:0014534","xrefs":{"Monarch":{"xref_id":"0014534"}}}


id: GO:0048852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the diencephalon are generated and organized. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.","definition_xrefs":["GOC:cls","GOC:dgh","ISBN:0838580343","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"forebrain morphogenesis","termid":"GO:0048853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diencephalon morphogenesis","termid":"GO:0048852"}


id: PBO:0066211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 4","termid":"PBO:0066211"}


id: PBO:0073339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 1","termid":"PBO:0073339"}


id: MONDO:0004163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A transitional cell carcinoma of the urinary bladder that arises from the urachal epithelium.","definition_xrefs":["NCIT:C39844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder urachal carcinoma","termid":"MONDO:0003715"},{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder urachal urothelial carcinoma","secondary_identifiers":["MEDGEN:267744","UMLS:C1511207","DOID:7244"],"synonyms":[{"name":"bladder urachal urothelial carcinoma","type":"exact"}],"termid":"MONDO:0004163","xrefs":{"Monarch":{"xref_id":"0004163"}}}


id: MONDO:0007392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coxoauricular syndrome is an extremely rare primary bone defect, described only in a mother and her three daughters to date, characterized by short stature, hip dislocation, minor vertebral and pelvic changes, and microtia with hearing loss. There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:1508"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coxoauricular syndrome","secondary_identifiers":["MEDGEN:343827","MESH:C565148","OMIM:122780","SCTID:732248005","UMLS:C1852513","GARD:1558","icd11.foundation:649449912"],"synonyms":[{"name":"coxoauricular syndrome","type":"exact"}],"termid":"MONDO:0007392","xrefs":{"Monarch":{"xref_id":"0007392"}}}


id: PBO:0003796
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome","termid":"PBO:0003796"}


id: GO:0035913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ventral aorta are generated and organized. The ventral aorta is a blood vessel in a single-pass circulatory system that carries de-oxygenated blood from the heart to the gills. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["UBERON:0003085","ZFA:0000604","Wikipedia:Aorta","GOC:bf","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta morphogenesis","termid":"GO:0035909"},{"relation_name":"part_of","term_name":"ventral aorta development","termid":"GO:0035908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral aorta morphogenesis","termid":"GO:0035913"}


id: MONDO:0011670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome due to tenascin-X deficiency","secondary_identifiers":["GARD:8507","DOID:0080731","MEDGEN:336244","Orphanet:230839","UMLS:C1848029","MESH:C536193","icd11.foundation:1840696236","OMIM:606408"],"synonyms":[{"name":"EDS due to TNX deficiency","type":"related"},{"name":"EDS due to Tnx deficiency","type":"related"},{"name":"EDS, classic-like type","type":"exact"},{"name":"EDSCLL","type":"related"},{"name":"Ehlers-Danlos syndrome due to tenascin-X deficiency","type":"exact"},{"name":"Ehlers-Danlos syndrome, classic-like","type":"related"},{"name":"Ehlers-Danlos syndrome, classic-like type","type":"exact"},{"name":"Ehlers-Danlos syndrome, classic-like, 1","type":"exact"},{"name":"Ehlers-Danlos-like syndrome due to tenascin-X deficiency","type":"related"},{"name":"TNX deficiency","type":"related"},{"name":"Tnx deficiency","type":"related"},{"name":"clEDS","type":"related"},{"name":"classical-like EDS","type":"related"},{"name":"classical-like Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0011670","xrefs":{"Monarch":{"xref_id":"0011670"}}}


id: GO:0140629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a small conductance calcium-activated potassium channel.","definition_xrefs":["PMID:20562108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel inhibitor activity","termid":"GO:0140629"}


id: PBO:0064622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU6F2 antisense RNA 2","termid":"PBO:0064622"}


id: PBO:0054957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2371","termid":"PBO:0054957"}


id: FYPO:0007995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the old cell tip does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:15184402","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during mitotic interphase","termid":"FYPO:0003329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to old cell tip during mitotic interphase","termid":"FYPO:0007995"}


id: MONDO:0041775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"intraoperative floppy iris syndrome","secondary_identifiers":["UMLS:C1688637","MEDGEN:739048","SCTID:418801006"],"synonyms":[{"name":"intraoperative floppy iris syndrome","type":"exact"}],"termid":"MONDO:0041775","xrefs":{"Monarch":{"xref_id":"0041775"}}}


id: GO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desmosome organization","termid":"GO:0002934"},{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"desmosome assembly","termid":"GO:0002159"}


id: GO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid that contributes to mitochondrial division.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial nucleoid organization involved in mitochondrial fission (obsolete GO:0090145)","synonyms":[{"name":"mitochondrial nucleoid organisation involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090145"}


id: PBO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF300 family protein","termid":"PBO:0000779"}


id: MONDO:0031045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, IIa 11","secondary_identifiers":["MEDGEN:1823978","UMLS:C5774205","OMIM:620019"],"synonyms":[{"name":"DA11","type":"exact"},{"name":"arthrogryposis, distal, IIa 11","type":"exact"}],"termid":"MONDO:0031045","xrefs":{"Monarch":{"xref_id":"0031045"}}}


id: GO:0120308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal outer doublet, a part of an axoneme consisting of a doublet microtubule.","definition_xrefs":["GOC:krc","GOC:ach","PMID:16278296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"axonemal outer doublet assembly","synonyms":[{"name":"axonemal outer doublet biogenesis","type":"exact"},{"name":"axonemal outer doublet formation","type":"exact"},{"name":"axonemal outer doublet morphogenesis","type":"exact"},{"name":"axoneme outer doublet assembly","type":"exact"},{"name":"outer doublet assembly","type":"broad"},{"name":"outer-doublet microtubule assembly","type":"broad"}],"termid":"GO:0120308"}


id: PBO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming]","termid":"PBO:0002071"}


id: PBO:0068083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 389","termid":"PBO:0068083"}


id: FYPO:0008365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 2-deoxyglucose. Cells stop growing (and may die) at a concentration of 2-deoxyglucose that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to 2-deoxyglucose","termid":"FYPO:0008365"}


id: PBO:0062791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 5","termid":"PBO:0062791"}


id: FYPO:0001446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular trehalose level","synonyms":[{"name":"abnormal cellular trehalose accumulation","type":"related"},{"name":"abnormal cellular trehalose level","type":"exact"}],"termid":"FYPO:0001446"}


id: SO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mating type region motif, the rightmost segment of homology in the HML and MAT mating loci (not present in HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Z2_region","synonyms":[{"name":"Z2-segment","type":"exact"}],"termid":"SO:0002003"}


id: FYPO:0000112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sorbitol. Cells stop growing (and may die) at a concentration of sorbitol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sorbitol","synonyms":[{"name":"hypersensitive to sorbitol","type":"exact"},{"name":"sensitive to glucitol","type":"exact"},{"name":"sensitive to sorbitol during mitotic cell cycle","type":"related"},{"name":"sensitive to sorbitol during vegetative growth","type":"exact"}],"termid":"FYPO:0000112"}


id: GO:1902892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of root hair elongation.","definition_xrefs":["GOC:als","PMID:22329353","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of root hair elongation","termid":"GO:1902890"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"positively_regulates","term_name":"root hair elongation","termid":"GO:0048767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of root hair elongation","synonyms":[{"name":"activation of root hair elongation","type":"narrow"},{"name":"up regulation of root hair elongation","type":"exact"},{"name":"up-regulation of root hair elongation","type":"exact"},{"name":"upregulation of root hair elongation","type":"exact"}],"termid":"GO:1902892"}


id: PBO:0031655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031655"}


id: PBO:0043527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 8","termid":"PBO:0043527"}


id: MONDO:0800317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 4","secondary_identifiers":["MEDGEN:336904","UMLS:C1845295"],"synonyms":[{"name":"POF4","type":"exact"}],"termid":"MONDO:0800317","xrefs":{"Monarch":{"xref_id":"0800317"}}}


id: PBO:0028564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intergenic_meiotic_recombination","termid":"PBO:0028564"}


id: GO:1902053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neosartoricin biosynthetic process.","definition_xrefs":["GOC:di","PMID:23368997","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"neosartoricin biosynthetic process","termid":"GO:1902050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"regulation of neosartoricin biosynthetic process","synonyms":[{"name":"regulation of neosartoricin anabolism","type":"exact"},{"name":"regulation of neosartoricin biosynthesis","type":"exact"},{"name":"regulation of neosartoricin formation","type":"exact"},{"name":"regulation of neosartoricin synthesis","type":"exact"}],"termid":"GO:1902053"}


id: GO:1902780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonane stimulus.","definition_xrefs":["PMID:22958739","GOC:mengo_curators","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonane","termid":"GO:1902780"}


id: FYPO:0006565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable under conditions of phosphate starvation.","definition_xrefs":["PMID:9372444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal viability upon phosphate starvation","synonyms":[{"name":"normal cell population viability upon phosphate starvation","type":"exact"}],"termid":"FYPO:0006565"}


id: GO:0070183
data:
  {"annotated_genes":["SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70996],"is_not":false,"summary":null,"term":"GO:0070183"}]},"cv_name":"biological_process","definition":"The process of coupling tryptophan to tryptophanyl-tRNA in a mitochondrion, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophanyl-tRNA aminoacylation","termid":"GO:0006436"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0140053","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tryptophanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070183","terms_by_termid":{"GO:0070183":null}}


id: GO:0031127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->2) linkage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"alpha-(1,2)-fucosyltransferase activity","synonyms":[{"name":"alpha-(1->2)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,2-fucosyltransferase activity","type":"exact"}],"termid":"GO:0031127"}


id: PBO:0069418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 680, pseudogene","termid":"PBO:0069418"}


id: PBO:0071678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 10","termid":"PBO:0071678"}


id: PBO:0049384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 6","termid":"PBO:0049384"}


id: PBO:0065249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20B","termid":"PBO:0065249"}


id: FYPO:0003739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a replication origin by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000653"],"is_obsolete":false,"name":"decreased DNA replication origin binding","synonyms":[{"name":"decreased origin binding","type":"exact"},{"name":"reduced DNA replication origin binding","type":"exact"}],"termid":"FYPO:0003739"}


id: GO:0140193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140193)","termid":"GO:0140193"}


id: PBO:0065938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac GTPase activating protein 1","termid":"PBO:0065938"}


id: MONDO:1012131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"immunoglobulin G deficiency, non-human animal","termid":"MONDO:1011727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G deficiency, chicken","secondary_identifiers":["OMIA:000554-9031"],"termid":"MONDO:1012131","xrefs":{"Monarch":{"xref_id":"1012131"}}}


id: MONDO:0012542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 8, susceptibility to","secondary_identifiers":["OMIM:610707","DOID:0111288","UMLS:C1853143","MEDGEN:377839"],"synonyms":[{"name":"PSORS8","type":"exact"},{"name":"psoriasis 8, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 8","type":"exact"}],"termid":"MONDO:0012542","xrefs":{"Monarch":{"xref_id":"0012542"}}}


id: MONDO:0024653
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the bones and structures of the skull.","definition_xrefs":["NCIT:C3375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"skull neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D012888","ICD9:239.2","UMLS:C0037305","MEDGEN:11457","SCTID:126538005"],"synonyms":[{"name":"neoplasm of skull","type":"exact"},{"name":"neoplasm of the skull","type":"exact"},{"name":"skull neoplasm","type":"exact"},{"name":"skull tumor","type":"exact"},{"name":"skull tumour","type":"exact"},{"name":"tumor of skull","type":"exact"},{"name":"tumor of the skull","type":"exact"},{"name":"tumour of skull","type":"exact"},{"name":"tumour of the skull","type":"exact"}],"termid":"MONDO:0024653","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0024653"}}}


id: PR:O14030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.08","synonyms":[{"name":"Spom972h-clr5","type":"exact"}],"termid":"PR:O14030"}


id: PBO:0079496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 17","termid":"PBO:0079496"}


id: GO:0033619
data:
  {"annotated_genes":["SJAG_04583"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75792],"is_not":false,"summary":null,"term":"GO:0033619"}]},"cv_name":"biological_process","definition":"The proteolytic cleavage of a transmembrane protein leading to the release of its intracellular or ecto-domains.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane protein proteolysis","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0033619","terms_by_termid":{"GO:0033619":null}}


id: GO:0110145
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a magnetosome.","definition_xrefs":["PMID:27620945","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"magnetosome","termid":"GO:0110143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"magnetosome lumen","termid":"GO:0110145"}


id: PBO:0080021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 7","termid":"PBO:0080021"}


id: PBO:0064152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 4","termid":"PBO:0064152"}


id: FYPO:0004243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to DNA damage","synonyms":[{"name":"decreased protein kinase activity in response to DNA damage","type":"related"},{"name":"reduced protein kinase activity during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0004243"}


id: GO:0021908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GO_REF:0000021","GOC:jid","PMID:11262869","GOC:dph","GOC:dgh","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in spinal cord anterior/posterior pattern formation (obsolete GO:0021908)","synonyms":[{"name":"retinoic acid receptor signalling pathway in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021908"}


id: FYPO:0000013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length is normal, and a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0005568","FYPO:0005447","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"T-shaped vegetative cell with normal cell length","synonyms":[{"name":"T-shaped cell with normal cell length during vegetative growth","type":"exact"},{"name":"T-shaped vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"cell morphology, T shaped with normal cell length during vegetative growth","type":"exact"}],"termid":"FYPO:0000013"}


id: FYPO:0008001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to menadione when the cell population is in stationary phase. Cells stop growing (and may die) at a concentration of menadione that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr","PMID:35618649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical in stationary phase","termid":"FYPO:0008000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to menadione in stationary phase","synonyms":[{"name":"sensitive to menadione during stationary phase","type":"exact"}],"termid":"FYPO:0008001"}


id: GO:1904556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tryptophan across a membrane.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan transport","termid":"GO:0015827"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-tryptophan transmembrane transport","termid":"GO:1904556"}


id: FYPO:0001283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during a cellular response to nitrogen starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to nitrogen starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to nitrogen starvation","type":"related"},{"name":"decreased protein level during cellular response to nitrogen depletion","type":"exact"},{"name":"decreased protein level during cellular response to nitrogen deprivation","type":"exact"},{"name":"decreased protein level during nitrogen starvation","type":"exact"},{"name":"reduced protein level during cellular response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0001283"}


id: PBO:0076943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF3 fusion partner","termid":"PBO:0076943"}


id: GO:0044339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:0044339)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:0044339"}


id: GO:0034966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box H/ACA type small nucleolar RNA (snoRNA) transcript that resides within, and is processed from, the intron of a pre-mRNA into a mature box H/ACA snoRNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intronic snoRNA processing","termid":"GO:0031070"},{"relation_name":"is_a","term_name":"box H/ACA sno(s)RNA processing","termid":"GO:0034964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016074","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"intronic box H/ACA snoRNA processing","termid":"GO:0034966"}


id: PBO:0062954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 like","termid":"PBO:0062954"}


id: GO:0043812
data:
  {"annotated_genes":["SJAG_00880","SJAG_02706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73540,77943],"is_not":false,"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol-4-phosphate + H2O = phosphatidyl-1D-myo-inositol + phosphate.","definition_xrefs":["RHEA:55652","PMID:10224048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 4-phosphatase activity","termid":"GO:0034596"},{"relation_name":"is_a","term_name":"phosphatidylinositol monophosphate phosphatase activity","termid":"GO:0052744"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphatidylinositol 4-phosphate phosphatase activity","type":"exact"}],"termid":"GO:0043812","terms_by_termid":{"GO:0043812":null}}


id: PBO:0072423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 28","termid":"PBO:0072423"}


id: PATO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000606 absolute angle value (obsolete PATO:0000606)","termid":"PATO:0000606"}


id: GO:0071163
data:
  {"annotated_genes":["SJAG_02607","SJAG_04879","SJAG_02908","SJAG_04995","SJAG_01823","SJAG_00327","SJAG_02667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107147,113368,115213,109742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140529"},{"annotations":[71746,77934,57166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902977"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the DNA replication preinitiation complex, a protein-DNA complex that is assembled at DNA replication origins as part of initiation of DNA replication. The complex consists of proteins that initiate the DNA binding, melt the helix and enable helicase activity.","definition_xrefs":["GOC:mah","PMID:28209641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_01823":null,"SJAG_02607":null,"SJAG_02667":null,"SJAG_02908":null,"SJAG_04879":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0044085","GO:0007049","GO:0006260","GO:0065003"],"is_obsolete":false,"name":"DNA replication preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902316","GO:1902293"],"synonyms":[{"name":"DNA replication preinitiation complex formation","type":"exact"},{"name":"pre-IC complex assembly","type":"exact"}],"termid":"GO:0071163","terms_by_termid":{"GO:0140529":null,"GO:1902977":null}}


id: MOD:01218
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:15283597","Unimod:285#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), light C12","termid":"MOD:00605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12 - site E","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:01218"}


id: PBO:0082240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of chaperonin-containing T-complex; complex mediates protein folding in the cytosol; involved in actin cytoskeleton maintenance; overexpression in neurons suppresses formation of pathogenic conformations of huntingtin protein","termid":"PBO:0082240"}


id: MOD:00876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexosamine sugar group through a glycosidic bond.","definition_xrefs":["Unimod:454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"hexosaminylated residue","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"},{"name":"Hexosamines (GalN, GlcN)","type":"exact"}],"termid":"MOD:00876"}


id: GO:0007548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the sex of an organism by physical differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex differentiation","secondary_identifiers":["Wikipedia:Sexual_differentiation"],"termid":"GO:0007548"}


id: GO:0007480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a leg derived from an imaginal disc are generated and organized. A leg is a limb on which an animal walks and stands. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"leg disc morphogenesis","termid":"GO:0007478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}


id: GO:1902683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor localization to synapse.","definition_xrefs":["PMID:22252129","GOC:kmv","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor localization to synapse","synonyms":[{"name":"regulation of receptor localisation to synapse","type":"exact"}],"termid":"GO:1902683"}


id: MONDO:0019725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and autoimmune disease with epilepsy (obsolete MONDO:0015657)","termid":"MONDO:0015657"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary interstitial lung disease specific to childhood associated with a connective tissue disease (obsolete MONDO:0017021)","termid":"MONDO:0017021"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"excluded_subClassOf","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pediatric systemic lupus erythematosus","secondary_identifiers":["UMLS:C1274834","GARD:19219","MEDGEN:698153","Orphanet:93552"],"synonyms":[{"name":"SLE, paediatric onset","type":"exact"},{"name":"SLE, pediatric onset","type":"exact"}],"termid":"MONDO:0019725","xrefs":{"Monarch":{"xref_id":"0019725"}}}


id: GO:0043291
data:
  {"annotated_genes":["SJAG_04454","SJAG_03219","SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72339,109958,110119],"is_not":false,"summary":null,"term":"GO:0043291"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that in Saccharomyces is composed of three subunits, Rav1p, Rav2p and Skp1p. Acts transiently to catalyze assembly of cytoplasmic V1, with membrane embedded V0 to form the V-ATPase holoenzyme.","definition_xrefs":["PMID:11283612","PMID:11844802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_03219":null,"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"RAVE complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulator of the (H+)-ATPase of the vacuolar and endosomal membranes","type":"broad"}],"termid":"GO:0043291","terms_by_termid":{"GO:0043291":null}}


id: PBO:0076575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 3","termid":"PBO:0076575"}


id: PBO:0060298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 7","termid":"PBO:0060298"}


id: MOD:00298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, an L-glutamic acid residue, an L-histidine residue, an L-serine residue and a one-nickel three-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["PubMed:2550436","RESID:AA0293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"Ni-3Fe-2S-3O cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"hybrid nickel-triiron cluster","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O3-serinyl 2-nickel-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","type":"exact"}],"termid":"MOD:00298"}


id: SO:1000064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An umbrella term for terms describing an effect of a sequence variation on the frame of translation.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000064 sequence_variation_affecting_reading_frame (obsolete SO:1000064)","synonyms":[{"name":"mutation affecting reading frame","type":"exact"},{"name":"sequence variation affecting reading frame","type":"related"}],"termid":"SO:1000064"}


id: PBO:0089446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase","termid":"PBO:0089446"}


id: MONDO:0006530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathologic process characterized by the proliferation of keratinizing squamous epithelium resulting in the accumulation of keratin and cells in the middle ear and/or mastoid. It may be congenital or acquired. If left untreated, it may increase in size and destroy adjacent structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholesteatoma","secondary_identifiers":["SCTID:363668000","NCIT:C2944","DOID:869","ICD9:385.30","EFO:1000675","HP:0009797","UMLS:C0008373","MEDGEN:3043","MESH:D002781"],"synonyms":[{"name":"cholesteatoma","type":"exact"},{"name":"cholesteatoma (disease)","type":"exact"},{"name":"congenital cholesteatoma (type)","type":"related"},{"name":"primary acquired cholesteatoma (type)","type":"related"},{"name":"secondary acquired cholesteatoma (type)","type":"related"}],"termid":"MONDO:0006530","xrefs":{"Monarch":{"xref_id":"0006530"}}}


id: PBO:0087711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087711"}


id: PBO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin (predicted)","termid":"PBO:0002069"}


id: PBO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCMAP divergent transcript","termid":"PBO:0060637"}


id: PBO:0049437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 14","termid":"PBO:0049437"}


id: PBO:0002353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-6-phosphate phosphatase Tpp1","termid":"PBO:0002353"}


id: PBO:0043026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 2A","termid":"PBO:0043026"}


id: GO:1903698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microvillus assembly.","definition_xrefs":["GOC:TermGenie","PMID:22797597","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microvillus assembly","termid":"GO:0032534"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"microvillus assembly","termid":"GO:0030033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of microvillus assembly","synonyms":[{"name":"activation of microvillus assembly","type":"narrow"},{"name":"activation of microvillus biogenesis","type":"related"},{"name":"positive regulation of microvillus biogenesis","type":"related"},{"name":"up regulation of microvillus assembly","type":"exact"},{"name":"up regulation of microvillus biogenesis","type":"related"},{"name":"up-regulation of microvillus assembly","type":"exact"},{"name":"up-regulation of microvillus biogenesis","type":"related"},{"name":"upregulation of microvillus assembly","type":"exact"},{"name":"upregulation of microvillus biogenesis","type":"related"}],"termid":"GO:1903698"}


id: PBO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA Meu3","termid":"PBO:0004984"}


id: PBO:0071302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 25","termid":"PBO:0071302"}


id: PBO:0044263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 1 pseudogene 1","termid":"PBO:0044263"}


id: PBO:0114489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; required for signal transduction during entry into meiosis; promotes the formation of the Ime1p-Ume6p complex by phosphorylating Ime1p and Ume6p; shares similarity with mammalian glycogen synthase kinase 3-beta; protein abundance increases in response to DNA replication stress; RIM11 has a paralog, MRK1, that arose from the whole genome duplication","termid":"PBO:0114489"}


id: GO:0051147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["CL:0000187","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle cell differentiation","termid":"GO:0051147"}


id: PBO:0043509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 4","termid":"PBO:0043509"}


id: MOD:01195
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:15456300","Unimod:136#K","PubMed:11813307","PubMed:12777388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoyl labeling reagent light form (N-term and K)","termid":"MOD:00505"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzoyl labeling reagent light form - site K","synonyms":[{"name":"Benzoyl","type":"related"},{"name":"labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:01195"}


id: PATO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality inhering in a bearer by virtue of the bearer's lack of hairs or bristles.","definition_xrefs":["PATOC:CJM","PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilosity","termid":"PATO:0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glabrous","synonyms":[{"name":"hairless","type":"related"}],"termid":"PATO:0000453"}


id: PBO:0051728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 1","termid":"PBO:0051728"}


id: MONDO:0971043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, feeding difficulties, facial dysmorphism, and brain abnormalities","secondary_identifiers":["OMIM:620852","MEDGEN:1857550","UMLS:C5935629"],"termid":"MONDO:0971043","xrefs":{"Monarch":{"xref_id":"0971043"}}}


id: PBO:0041891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catsper channel auxiliary subunit zeta","termid":"PBO:0041891"}


id: PBO:0042789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164","termid":"PBO:0042789"}


id: GO:0097388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 19 (CCL19) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 production","synonyms":[{"name":"CCL19 production","type":"exact"},{"name":"EBI1 ligand chemokine production","type":"exact"},{"name":"ELC production","type":"exact"},{"name":"MIP-3-beta production","type":"exact"},{"name":"macrophage inflammatory protein-3-beta production","type":"exact"}],"termid":"GO:0097388"}


id: MONDO:0013643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial juvenile hyperuricemic nephropathy","termid":"MONDO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hyperuricemic nephropathy, familial juvenile type 3","secondary_identifiers":["MEDGEN:481846","UMLS:C3280216","OMIM:614227"],"synonyms":[{"name":"HNFJ3","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, 3","type":"related"}],"termid":"MONDO:0013643","xrefs":{"Monarch":{"xref_id":"0013643"}}}


id: GO:0019392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucarate, the dianion of glucaric acid, an aldaric acid derived from either glucose or gulose. There are two enantiomers L- and D-glucarate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucarate metabolic process","secondary_identifiers":["GO:0019581"],"synonyms":[{"name":"glucarate metabolism","type":"exact"}],"termid":"GO:0019392"}


id: PBO:0079572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 4","termid":"PBO:0079572"}


id: PBO:0052773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 65","termid":"PBO:0052773"}


id: PBO:0070953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 8","termid":"PBO:0070953"}


id: PR:P0CY16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat3-Mc gene.","definition_xrefs":["UniProtKB:P0CY16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type M-specific polypeptide Mc (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.02","synonyms":[{"name":"Spom972h-mat3-Mc","type":"exact"},{"name":"mat-Mc (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CY16"}


id: PBO:0034337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-expresses","termid":"PBO:0034337"}


id: FYPO:0006400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the frequency of DNA replication initiation is higher than normal at inefficient origins, i.e. replication origins that normally rarely fire.","definition_xrefs":["PMID:28903048","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased mitotic DNA replication initiation from inefficient origin","synonyms":[{"name":"increased DNA replication initiation from inefficient origin during mitotic cell cycle","type":"exact"},{"name":"increased DNA replication initiation from inefficient origin during vegetative growth","type":"exact"},{"name":"increased firing of inefficient replication origins","type":"exact"},{"name":"increased mitotic DNA replication initiation at inefficient origin","type":"exact"},{"name":"increased mitotic DNA replication initiation from inefficient replication origin","type":"related"}],"termid":"FYPO:0006400"}


id: PBO:0083814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential SNARE protein localized to the ER; involved in retrograde traffic from the Golgi to the ER and Sey1p-independent homotypic ER fusion; required for efficient nuclear fusion during mating; forms a complex with the SNAREs Sec22p, Sec20p and Ufe1p","termid":"PBO:0083814"}


id: PBO:0088040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme; most similar in sequence to Xenopus ubiquitin-conjugating enzyme E2-C, but not a true functional homolog of this E2; unlike E2-C, not required for the degradation of mitotic cyclin Clb2","termid":"PBO:0088040"}


id: PBO:0040815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRD4 interacting chromatin remodeling complex associated protein","termid":"PBO:0040815"}


id: PBO:0042566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 1B","termid":"PBO:0042566"}


id: PBO:0113333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to the ER and peroxisomes; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113333"}


id: PR:Q9URW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPJ691.02 gene.","definition_xrefs":["UniProtKB:Q9URW3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein yippee-like PJ691.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ691.02","synonyms":[{"name":"Spom972h-SPAPJ691.02","type":"exact"}],"termid":"PR:Q9URW3"}


id: PBO:0026911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0026911"}


id: GO:0018408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The iodination of peptidyl-thyronine to form peptidyl-3',3'',5',5''-tetraiodo-L-thyronine (L-thyroxine).","definition_xrefs":["RESID:AA0178"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-thyronine iodination to form 3',3'',5',5''-tetraiodo-L-thyronine (obsolete GO:0018408)","termid":"GO:0018408"}


id: PR:Q9UQW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetyl-CoA acetyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18919:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.09c","secondary_identifiers":["UniProtKB:Q9UQW6"],"synonyms":[{"name":"SPBC215.09c","type":"related"},{"name":"Spom972h-ACAT1","type":"exact"},{"name":"acetoacetyl-CoA thiolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UQW6"}


id: PBO:0079376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 11","termid":"PBO:0079376"}


id: MONDO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Bowman's membrane folds or rupture","secondary_identifiers":["ICD9:371.31","MEDGEN:509796","DOID:11552","SCTID:45382000","UMLS:C0155115"],"synonyms":[{"name":"Bowman membrane folds or rupture","type":"exact"},{"name":"folds and/or rupture of bowman's membrane","type":"exact"}],"termid":"MONDO:0001310","xrefs":{"Monarch":{"xref_id":"0001310"}}}


id: GO:0009225
data:
  {"annotated_genes":["SJAG_00519","SJAG_02648","SJAG_01784","SJAG_02951","SJAG_02178","SJAG_01089","SJAG_01443","SJAG_00978","SJAG_02783","SJAG_00890","SJAG_03723","SJAG_01209","SJAG_03818","SJAG_04728","SJAG_03188","SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102875,75206,77744,67886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"},{"annotations":[79840,108704,72212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006011"},{"annotations":[109392,113525,113524,113517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052574"},{"annotations":[66937,71656,70472,58128,76306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The cellular chemical reactions and pathways involving nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00890":null,"SJAG_00978":null,"SJAG_01089":null,"SJAG_01209":null,"SJAG_01443":null,"SJAG_01784":null,"SJAG_02178":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03188":null,"SJAG_03723":null,"SJAG_03818":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleotide-sugar metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-sugar metabolism","type":"exact"}],"termid":"GO:0009225","terms_by_termid":{"GO:0006011":null,"GO:0006048":null,"GO:0009298":null,"GO:0052574":null}}


id: PBO:0058021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3960","termid":"PBO:0058021"}


id: PBO:0032745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B delta subunit","termid":"PBO:0032745"}


id: PBO:0113101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate denatured, protein aggregates; responds to stresses (heat, ethanol, and sodium arsenite); required for the protein aggregate solid-to-liquid phase transition and dispersal of liquid condensates; involved in [PSI+] propagation; potentiated variants eliminate TDP-43 cytoplasmic aggregates to reduce proteotoxicity; becomes more abundant and forms cytoplasmic foci during replication stress","termid":"PBO:0113101"}


id: GO:0019518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form to form 2-amino-3-oxobutanoate, which is subsequently converted to glycine.","definition_xrefs":["GOC:mah","MetaCyc:THREONINE-DEG2-PWY","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-threonine catabolic process to glycine","secondary_identifiers":["Reactome:R-HSA-8849175"],"synonyms":[{"name":"L-threonine breakdown to glycine","type":"exact"},{"name":"L-threonine catabolic process to pyruvate","type":"related"},{"name":"L-threonine catabolism to glycine","type":"exact"},{"name":"L-threonine degradation to glycine","type":"exact"},{"name":"threonine catabolic process to glycine","type":"broad"}],"termid":"GO:0019518"}


id: PBO:0034387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paedomorphorsis_relationship_with","termid":"PBO:0034387"}


id: PBO:0040903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 7","termid":"PBO:0040903"}


id: GO:1901879
data:
  {"annotated_genes":["SJAG_02700","SJAG_04312","SJAG_01894","SJAG_00279","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92083,75373,78904,79807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[101639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein depolymerization.","definition_xrefs":["GOC:rl","PMID:12032137","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein polymer breakdown","type":"exact"},{"name":"regulation of protein polymer catabolic process","type":"exact"},{"name":"regulation of protein polymer catabolism","type":"exact"},{"name":"regulation of protein polymer degradation","type":"exact"}],"termid":"GO:1901879","terms_by_termid":{"GO:0031117":null,"GO:0051016":null}}


id: PBO:0018038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transmembrane transporter Liz1","termid":"PBO:0018038"}


id: PBO:0003136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter (predicted)","termid":"PBO:0003136"}


id: GO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the sinoatrial valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"sinoatrial valve morphogenesis","termid":"GO:0003185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial valve formation","synonyms":[{"name":"SA valve formation","type":"exact"}],"termid":"GO:0003194"}


id: PBO:0031065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_septated_germ_tube_morphology","termid":"PBO:0031065"}


id: GO:0071459
data:
  {"annotated_genes":["SJAG_03540","SJAG_01297","SJAG_02761","SJAG_04259","SJAG_04126","SJAG_03327","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74998,59182,77669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034501"},{"annotations":[103691,108067,118476,100174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the centromeric region of a chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chromosome, centromeric region","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to chromosome, centromeric region","type":"exact"},{"name":"protein localization to centromere","type":"exact"},{"name":"protein localization to chromosome, centric region","type":"exact"}],"termid":"GO:0071459","terms_by_termid":{"GO:0034501":null,"GO:0140210":null}}


id: PBO:0042517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDIP transferase opposite strand, pseudogene","termid":"PBO:0042517"}


id: PBO:0012012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing protein, human NSRP1 ortholog","termid":"PBO:0012012"}


id: GO:0120035
data:
  {"annotated_genes":["SJAG_01794","SJAG_03453","SJAG_02379","SJAG_00514","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93237,87641,90602,111163,89615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of plasma membrane bounded cell projections.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"regulates","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane bounded cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120035","terms_by_termid":{"GO:1902917":null}}


id: GO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell aggregation","termid":"GO:0098743"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage condensation","termid":"GO:0001502"}


id: PBO:0030615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0030615"}


id: FYPO:0002797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein degradation","synonyms":[{"name":"decreased protein breakdown","type":"exact"},{"name":"decreased protein catabolic process","type":"exact"},{"name":"decreased protein catabolism","type":"exact"},{"name":"reduced protein degradation","type":"exact"}],"termid":"FYPO:0002797"}


id: PBO:0043159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 27","termid":"PBO:0043159"}


id: PBO:0083539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YIP4/YGL198W","termid":"PBO:0083539"}


id: GO:0080085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of a protein and RNA component which binds the signal sequence of some proteins and facilitates their export to the chloroplast.","definition_xrefs":["PMID:17513500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal recognition particle","termid":"GO:0048500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle, chloroplast targeting","termid":"GO:0080085"}


id: PBO:0017457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inheres_in","termid":"PBO:0017457"}


id: GO:2000080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of canonical Wnt signaling pathway modulating the rate or frequency of pancreatic B cell proliferation.","definition_xrefs":["GOC:yaf","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in controlling type B pancreatic cell proliferation (obsolete GO:2000080)","synonyms":[{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in pancreatic beta cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:2000080"}


id: PBO:0066326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and CCCH-type domains 2","termid":"PBO:0066326"}


id: GO:0010366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of an ethylene biosynthetic process.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethylene biosynthetic process","termid":"GO:0010364"},{"relation_name":"is_a","term_name":"negative regulation of sulfur amino acid metabolic process","termid":"GO:0031336"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"negatively_regulates","term_name":"ethylene biosynthetic process","termid":"GO:0009693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ethylene biosynthetic process","termid":"GO:0010366"}


id: PBO:0048192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABPA pseudogene","termid":"PBO:0048192"}


id: PATO:0000643
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded through an abnormal opening in the wall that contains it.","definition_xrefs":["spinalstenosis:spinalstenosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herniated","termid":"PATO:0000643"}


id: GO:0042713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expulsion of seminal fluid, thick white fluid containing spermatozoa, from the male genital tract.","definition_xrefs":["GOC:jl","PMID:26385403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm ejaculation","termid":"GO:0042713"}


id: GO:0070092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of glucagon.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"glucagon secretion","termid":"GO:0070091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of glucagon secretion","termid":"GO:0070092"}


id: GO:0044047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type I secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type I secretion system (obsolete GO:0044047)","termid":"GO:0044047"}


id: MONDO:0700244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the CACNA2D4 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"CACNA2D4-related retinopathy","synonyms":[{"name":"CACNA2D4-related retinopathy","type":"exact"}],"termid":"MONDO:0700244","xrefs":{"Monarch":{"xref_id":"0700244"}}}


id: PBO:0087832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiamine pyrophosphokinase; phosphorylates thiamine to produce the coenzyme thiamine pyrophosphate (thiamine diphosphate)","termid":"PBO:0087832"}


id: PBO:0057284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 504","termid":"PBO:0057284"}


id: PBO:0074256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 2A1","termid":"PBO:0074256"}


id: GO:0052915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(2445) in 23S rRNA = N(2)-methylguanosine(2445) in 23S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0140098","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"23S rRNA (guanine(2445)-N(2))-methyltransferase activity","secondary_identifiers":["RHEA:42740","MetaCyc:RXN-11574"],"termid":"GO:0052915"}


id: GO:1990021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of axon of a CA3 pyramidal neuron that projects to hippocampal area CA1.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon collateral","termid":"GO:0044303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schaffer axon collateral","synonyms":[{"name":"Schaffer collateral","type":"broad"}],"termid":"GO:1990021"}


id: PBO:0035756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_salt_stress","termid":"PBO:0035756"}


id: PBO:0078966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (AGA) 5-1","termid":"PBO:0078966"}


id: MONDO:0004314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous granular cell tumor","termid":"MONDO:0002291"},{"relation_name":"is_a","term_name":"granular cell cancer","termid":"MONDO:0003252"},{"relation_name":"is_a","term_name":"malignant dermis tumor","termid":"MONDO:0003363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"malignant cutaneous granular cell skin tumor","secondary_identifiers":["NCIT:C5614","UMLS:C1334575","DOID:7639","MEDGEN:233658"],"synonyms":[{"name":"malignant cutaneous granular cell tumor","type":"exact"},{"name":"malignant cutaneous granular cell tumour","type":"exact"},{"name":"malignant granular cell neoplasm of skin","type":"exact"},{"name":"malignant granular cell neoplasm of the skin","type":"exact"},{"name":"malignant granular cell skin neoplasm","type":"exact"},{"name":"malignant granular cell skin tumor","type":"exact"},{"name":"malignant granular cell skin tumour","type":"exact"},{"name":"malignant granular cell tumor of skin","type":"exact"},{"name":"malignant granular cell tumor of the skin","type":"exact"},{"name":"malignant granular cell tumour of skin","type":"exact"},{"name":"malignant granular cell tumour of the skin","type":"exact"}],"termid":"MONDO:0004314","xrefs":{"Monarch":{"xref_id":"0004314"}}}


id: MONDO:0012306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 2","secondary_identifiers":["DOID:0111426","UMLS:C1865071","MEDGEN:400673","GARD:18071","MESH:C566512","OMIM:609578"],"synonyms":[{"name":"RCM2","type":"related"},{"name":"cardiomyopathy, familial restrictive, 2","type":"exact"}],"termid":"MONDO:0012306","xrefs":{"Monarch":{"xref_id":"0012306"}}}


id: GO:0086053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an AV node cardiomyocyte and a bundle of His cardiac muscle cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication by electrical coupling","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086053"}


id: PR:000044703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is monomethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00085.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-monomethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me1","type":"exact"}],"termid":"PR:000044703"}


id: PBO:0067854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 156","termid":"PBO:0067854"}


id: PBO:0089907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5'- exoribonuclease Rex1","termid":"PBO:0089907"}


id: PBO:0075842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 3","termid":"PBO:0075842"}


id: MONDO:0006286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the major salivary glands. It usually arises from the parotid gland. It is the most common primary carcinoma of the salivary glands and usually presents as a firm and painless mass. It is characterized by the presence of epidermoid cells, mucus producing cells, and cells of intermediate type. The majority of cases have a favorable outcome.","definition_xrefs":["NCIT:C5906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland carcinoma","termid":"MONDO:0006284"},{"relation_name":"is_a","term_name":"salivary gland mucoepidermoid carcinoma","termid":"MONDO:0021009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"major salivary gland mucoepidermoid carcinoma","secondary_identifiers":["MEDGEN:233139","UMLS:C1334551","EFO:1000346"],"synonyms":[{"name":"major salivary gland mucoepidermoid cancer","type":"exact"},{"name":"major salivary gland mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of Major salivary gland","type":"exact"},{"name":"mucoepidermoid carcinoma of the Major salivary gland","type":"exact"}],"termid":"MONDO:0006286","xrefs":{"Monarch":{"xref_id":"0006286"}}}


id: SO:0001569
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a new (functional) splice site.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_site_variant","synonyms":[{"name":"cryptic splice site activation","type":"exact"}],"termid":"SO:0001569"}


id: PBO:0069666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 943, pseudogene","termid":"PBO:0069666"}


id: GO:0103061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP(4-) + H2O + a trans-methoxy-C60-meroacyl-[acp] = diphosphoric acid + a trans-methoxy-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz","PMID:15042094"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-methoxy-C60-meroacyl-AMP ligase activity (obsolete GO:0103061)","termid":"GO:0103061"}


id: MONDO:0060774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial polypoid lesion that arises from the vagina. It is characterized by the presence of a fibroblastic stroma which is often myxoid, covered by squamous epithelial cells.","definition_xrefs":["NCIT:C4948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp of vagina","termid":"MONDO:0021394"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal fibroepithelial polyp","secondary_identifiers":["MEDGEN:152894","UMLS:C0750071"],"synonyms":[{"name":"fibroepithelial polyp of the vagina","type":"exact"},{"name":"fibroepithelial polyp of vagina","type":"exact"},{"name":"vaginal fibroepithelial polyp","type":"exact"},{"name":"vaginal fibroepithelial stromal polyp","type":"exact"}],"termid":"MONDO:0060774","xrefs":{"Monarch":{"xref_id":"0060774"}}}


id: PBO:0046935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member A","termid":"PBO:0046935"}


id: MONDO:0007944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Treacher-Collins syndrome in which the cause of the disease is a mutation in the TCOF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Treacher-Collins syndrome","termid":"MONDO:0002457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Treacher Collins syndrome 1","secondary_identifiers":["DOID:0080789","OMIM:154500"],"synonyms":[{"name":"TCOF1 Treacher-Collins syndrome","type":"exact"},{"name":"TCS1","type":"related"},{"name":"TREACHER COLLINS syndrome 1","type":"related"},{"name":"Treacher Collins syndrome","type":"related"},{"name":"Treacher Collins syndrome type 1","type":"exact"},{"name":"Treacher Collins-Franceschetti syndrome","type":"related"},{"name":"Treacher-Collins syndrome 1","type":"exact"},{"name":"Treacher-Collins syndrome caused by mutation in TCOF1","type":"exact"},{"name":"mandibulofacial dysostosis","type":"related"}],"termid":"MONDO:0007944","xrefs":{"Monarch":{"xref_id":"0007944"}}}


id: PBO:0089848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue light photoreceptor Wcs1","termid":"PBO:0089848"}


id: PBO:0030390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030390"}


id: FYPO:0008212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in silent mating-type cassettes does not occur.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K9 methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008212"}


id: MOD:01637
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-glutamine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine removal","termid":"MOD:01637"}


id: GO:1902363
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["PMID:21131906","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:1902363","terms_by_termid":{"GO:1902543":null}}


id: MONDO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the pyloric lumen caused either by hypertrophy of the surrounding muscles or tissue scarring due to a chronic peptic ulcer.","definition_xrefs":["NCIT:C34966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis","secondary_identifiers":["MedDRA:10062499","SCTID:367403001","DOID:12639","HP:0002021","MESH:D011707","UMLS:C0034194","MESH:D017219","MEDGEN:18780","EFO:0009626","DOID:3122"],"synonyms":[{"name":"GOO","type":"exact"},{"name":"gastric outflow obstruction","type":"exact"},{"name":"gastric outlet obstruction","type":"exact"},{"name":"pyloric stenosis","type":"exact"},{"name":"pyloric stenosis (disease)","type":"exact"}],"termid":"MONDO:0001561","xrefs":{"Monarch":{"xref_id":"0001561"}}}


id: PBO:0081484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 366","termid":"PBO:0081484"}


id: MONDO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ververi-Brady syndrome","secondary_identifiers":["GARD:18015","UMLS:C4693824","MEDGEN:1647785","Orphanet:580940","OMIM:617982"],"synonyms":[{"name":"VERBRAS","type":"related"},{"name":"Ververi-Brady syndrome","type":"exact"}],"termid":"MONDO:0060707","xrefs":{"Monarch":{"xref_id":"0060707"}}}


id: MOD:01698
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an amino group with a trimethylaminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated protonated-residue","termid":"MOD:00711"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino trimethylated protonated-residue","synonyms":[{"name":"N2Me3+Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:01698"}


id: PBO:0069820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1106, pseudogene","termid":"PBO:0069820"}


id: PR:Q9HDT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDT7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein P20C8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.02c","synonyms":[{"name":"Spom972h-SPCP20C8.02c","type":"exact"}],"termid":"PR:Q9HDT7"}


id: PBO:0085501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein associated with U3 and U14 snoRNAs; required for pre-rRNA processing and 40S ribosomal subunit synthesis; localized in the nucleus and concentrated in the nucleolus; human BYSL functionally complements the heat sensitivity of an enp1 ts mutant","termid":"PBO:0085501"}


id: GO:0140581
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107658],"is_not":false,"summary":null,"term":"GO:0140581"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu+(in) = ADP + phosphate + Cu+(out).","definition_xrefs":["RHEA:25792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transporter activity","termid":"GO:0005375"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"P-type monovalent copper transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.8","MetaCyc:RXN-14455"],"termid":"GO:0140581","terms_by_termid":{"GO:0140581":null}}


id: GO:0050318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: digallate + H2O = 2 gallate + H+.","definition_xrefs":["EC:3.1.1.20","RHEA:16365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"tannase activity","secondary_identifiers":["KEGG_REACTION:R00053","MetaCyc:TANNASE-RXN"],"synonyms":[{"name":"tannase S","type":"related"},{"name":"tannin acetylhydrolase activity","type":"related"},{"name":"tannin acylhydrolase activity","type":"related"}],"termid":"GO:0050318"}


id: MONDO:0013893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple sclerosis, susceptibility to in which the cause of the disease is a mutation in the TNFRSF1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple sclerosis, susceptibility to","termid":"MONDO:0007462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple sclerosis, susceptibility to, 5","secondary_identifiers":["UMLS:C3553728","MEDGEN:766642","OMIM:614810"],"synonyms":[{"name":"MS5","type":"related"},{"name":"TNFRSF1A multiple sclerosis, susceptibility to","type":"exact"},{"name":"multiple sclerosis, susceptibility to caused by mutation in TNFRSF1A","type":"exact"},{"name":"multiple sclerosis, susceptibility to, 5","type":"exact"},{"name":"multiple sclerosis, susceptibility to, type 5","type":"exact"},{"name":"susceptibility to multiple sclerosis 5","type":"related"}],"termid":"MONDO:0013893","xrefs":{"Monarch":{"xref_id":"0013893"}}}


id: PBO:0082500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex; removes 5' cap structure from mRNAs prior to their degradation; also enters nucleus and positively regulates transcription initiation; nudix hydrolase family member; forms cytoplasmic foci upon DNA replication stress; human homolog DCP2 complements yeast dcp2 thermosensitive mutant","termid":"PBO:0082500"}


id: MONDO:0021657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the ovary and is composed of granulosa cells, Sertoli cells, Leydig cells, theca cells, and fibroblasts. Representative examples include thecoma, fibroma, Sertoli cell tumor, and granulosa cell tumor.","definition_xrefs":["NCIT:C4862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian sex cord-stromal tumor","secondary_identifiers":["DOID:0080369","ONCOTREE:SCST","UMLS:C0600113","MEDGEN:154644"],"synonyms":[{"name":"Sex cord-stromal neoplasm of ovary","type":"exact"},{"name":"Sex cord-stromal neoplasm of the ovary","type":"exact"},{"name":"Sex cord-stromal tumor of ovary","type":"exact"},{"name":"Sex cord-stromal tumor of the ovary","type":"exact"},{"name":"Sex cord-stromal tumour of ovary","type":"exact"},{"name":"Sex cord-stromal tumour of the ovary","type":"exact"},{"name":"ovarian Sex cord-stromal neoplasm","type":"exact"},{"name":"ovarian Sex cord-stromal tumor","type":"exact"},{"name":"ovarian Sex cord-stromal tumour","type":"exact"},{"name":"ovarian sex cord tumor with annular tubules","type":"related"},{"name":"ovarian sex cord tumour with annular tubules","type":"related"},{"name":"ovary sex cord-stromal tumor","type":"exact"},{"name":"ovary sex cord-stromal tumour","type":"exact"},{"name":"sex cord stromal tumor","type":"related"},{"name":"sex cord stromal tumour","type":"related"},{"name":"sex cord-stromal tumor of ovary","type":"exact"},{"name":"sex cord-stromal tumour of ovary","type":"exact"}],"termid":"MONDO:0021657","xrefs":{"Monarch":{"xref_id":"0021657"}}}


id: PBO:0018277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med4","termid":"PBO:0018277"}


id: _global:is_unit_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_unit_of","termid":"_global:is_unit_of"}


id: PBO:0046517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid raft associated 1","termid":"PBO:0046517"}


id: GO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a hormone into the circulatory system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"part_of","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endocrine hormone secretion","termid":"GO:0060986"}


id: MONDO:0011571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dentinogenesis imperfecta type 2","termid":"MONDO:0007441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, autosomal dominant 39, with dentinogenesis imperfecta 1","secondary_identifiers":["OMIM:605594","GARD:15383","MEDGEN:340145","UMLS:C1854146","MESH:C565316"],"synonyms":[{"name":"Dfna39/Dgi1 syndrome","type":"related"},{"name":"Dfna39/dentinogenesis imperfecta 1 syndrome","type":"related"},{"name":"Dgi1/Dfna39 syndrome","type":"related"},{"name":"deafness, autosomal dominant 39, with dentinogenesis","type":"narrow"},{"name":"deafness, autosomal dominant 39, with dentinogenesis imperfecta 1","type":"exact"},{"name":"deafness, autosomal dominant 39, with dentinogenesis imperfecta type 1","type":"exact"}],"termid":"MONDO:0011571","xrefs":{"Monarch":{"xref_id":"0011571"}}}


id: SO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift_variant (SO:0001589) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant_NMD_triggering","synonyms":[{"name":"frameshift variant-NMD triggering","type":"exact"},{"name":"frameshift variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002323"}


id: PBO:0062858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 3","termid":"PBO:0062858"}


id: GO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histamine + O2 = H2O2 + imidazole-4-acetaldehyde + NH4+.","definition_xrefs":["RHEA:25625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histamine oxidase activity","secondary_identifiers":["KEGG_REACTION:R02150","Reactome:R-HSA-5696131","MetaCyc:RXN-9600"],"synonyms":[{"name":"1H-Imidazole-4-ethanamine oxidase activity","type":"exact"},{"name":"1H-Imidazole-4-ethanamine:oxygen oxidoreductase (deaminating) activity","type":"exact"},{"name":"histamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052598"}


id: GO:0015889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cobalamin transport","secondary_identifiers":["Reactome:R-HSA-9758890","Reactome:R-HSA-9758881"],"synonyms":[{"name":"vitamin B12 transport","type":"exact"}],"termid":"GO:0015889"}


id: SO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"12 or 23 nucleotide spacer between the J-nonamer and the J-heptamer of a J-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"J_gene_recombination_feature","termid":"SO:0000302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_spacer","synonyms":[{"name":"J spacer","type":"exact"},{"name":"J-SPACER","type":"exact"}],"termid":"SO:0000517"}


id: PBO:0061702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 2","termid":"PBO:0061702"}


id: PBO:0039066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase","termid":"PBO:0039066"}


id: PR:O94394
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C126.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.01c","synonyms":[{"name":"Spom972h-SPCC126.01c","type":"exact"}],"termid":"PR:O94394"}


id: PBO:0054677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2084","termid":"PBO:0054677"}


id: GO:0008166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete viral replication (obsolete GO:0008166)","synonyms":[{"name":"viral replication","type":"exact"}],"termid":"GO:0008166"}


id: PBO:0059808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 34","termid":"PBO:0059808"}


id: GO:0060592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of the mammary gland from unspecified parts. The process begins with formation of the mammary line and ends when the solid mammary bud invades the primary mammary mesenchyme.","definition_xrefs":["PMID:17120154","GOC:dph","PMID:16168142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"mammary gland morphogenesis","termid":"GO:0060443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland formation","synonyms":[{"name":"mammary bud formation","type":"related"},{"name":"mammary line formation","type":"narrow"},{"name":"mammary placode formation","type":"narrow"},{"name":"mammary sprout formation","type":"related"}],"termid":"GO:0060592"}


id: MONDO:0004815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A plasma cell neoplasm associated with osteosclerotic and fibrotic changes in the bone trabeculae. Often, the lymph nodes show changes resembling the plasma cell variant of Castleman disease. It is often part of POEMS syndrome which is characterized by polyneuropathy, organomegaly, endocrinopathy, monoclonal gammopathy, and skin changes.","definition_xrefs":["NCIT:C7765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma cell myeloma","termid":"MONDO:0009693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"osteosclerotic plasma cell myeloma","secondary_identifiers":["DOID:9541","MEDGEN:857662","SCTID:425657001","UMLS:C3898068"],"synonyms":[{"name":"osteosclerotic multiple myeloma","type":"exact"},{"name":"osteosclerotic myeloma","type":"related"},{"name":"osteosclerotic plasma cell myeloma","type":"exact"}],"termid":"MONDO:0004815","xrefs":{"Monarch":{"xref_id":"0004815"}}}


id: FYPO:0000944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a normal morphology (i.e. size, shape, or structure). An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spore morphology","termid":"FYPO:0000943"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable spore with normal morphology","synonyms":[{"name":"lethal; spore with normal morphology","type":"exact"},{"name":"spore germination abolished, normal spore morphology","type":"related"}],"termid":"FYPO:0000944"}


id: PBO:0081070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 3","termid":"PBO:0081070"}


id: FYPO:0003950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is decreased.","definition_xrefs":["PMID:12925774","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at replication origin","synonyms":[{"name":"decreased protein localisation to chromatin at replication origin","type":"exact"},{"name":"decreased protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at replication origins during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at replication origin","type":"exact"}],"termid":"FYPO:0003950"}


id: GO:0061041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"regulates","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of wound healing","termid":"GO:0061041"}


id: PBO:0059121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 1 like","termid":"PBO:0059121"}


id: MONDO:1012178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, dog","secondary_identifiers":["OMIA:000690-9615"],"termid":"MONDO:1012178","xrefs":{"Monarch":{"xref_id":"1012178"}}}


id: GO:2000304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ceramide biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of sphingolipid biosynthetic process","termid":"GO:0090154"},{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"positively_regulates","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044085","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ceramide biosynthetic process","secondary_identifiers":["Reactome:R-HSA-5626978"],"synonyms":[{"name":"positive regulation of ceramide anabolism","type":"exact"},{"name":"positive regulation of ceramide biosynthesis","type":"exact"},{"name":"positive regulation of ceramide formation","type":"exact"},{"name":"positive regulation of ceramide synthesis","type":"exact"}],"termid":"GO:2000304"}


id: PBO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21 (predicted)","termid":"PBO:0002037"}


id: PBO:0041384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 24","termid":"PBO:0041384"}


id: PBO:0086320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to heat shock transcription factors; overexpression suppresses the pseudohyphal filamentation defect of a diploid mep1 mep2 homozygous null mutant; HMS2 has a paralog, SKN7, that arose from the whole genome duplication","termid":"PBO:0086320"}


id: PR:Q9Y827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A6.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.05c","synonyms":[{"name":"Spom972h-ptl3","type":"exact"}],"termid":"PR:Q9Y827"}


id: PBO:0109649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG Y-linked 2 (pseudogene)","termid":"PBO:0109649"}


id: PBO:0070489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 24","termid":"PBO:0070489"}


id: PBO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell end marker Tea3","termid":"PBO:0001937"}


id: PBO:0049990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 2 pseudogene 1","termid":"PBO:0049990"}


id: PR:O74172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2501 gene.","definition_xrefs":["UniProtKB:O74172","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.15","synonyms":[{"name":"S31-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2501","type":"exact"}],"termid":"PR:O74172"}


id: GO:0047563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoate + AH(2) + O2 = 2,3-dihydroxybenzoate + A + H2O.","definition_xrefs":["RHEA:14193","EC:1.14.99.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybenzoate 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R01508","MetaCyc:3-HYDROXYBENZOATE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"3-HBA-2-hydroxylase activity","type":"related"},{"name":"3-hydroxybenzoate 2-hydroxylase activity","type":"exact"},{"name":"3-hydroxybenzoate,hydrogen-donor:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0047563"}


id: MONDO:0017064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"thoracolumbosacral spina bifida aperta","secondary_identifiers":["icd11.foundation:2108603667","Orphanet:268384","MEDGEN:1732917","GARD:20953","UMLS:C5439435"],"termid":"MONDO:0017064","xrefs":{"Monarch":{"xref_id":"0017064"}}}


id: PBO:0075631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2A","termid":"PBO:0075631"}


id: MONDO:0016602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Citrin deficiency is a rare autosomal recessive urea cycle defect characterized clinically by recurring episodes of hyperammonemia and associated neuropsychiatric symptoms in the adult-onset form (citrullinemia type II), and by transient cholestasis and variable hepatic dysfunction in the neonatal form (neonatal intrahepatic cholestasis due to citrin deficiency).","definition_xrefs":["Orphanet:247582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrullinemia","termid":"MONDO:0015991"},{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"citrin deficiency","secondary_identifiers":["SCTID:429735007","MEDGEN:372684","UMLS:C1997910","icd11.foundation:348535193","NANDO:2200483","GARD:20661","NANDO:1200978"],"synonyms":[{"name":"citrin deficiency","type":"exact"}],"termid":"MONDO:0016602","xrefs":{"Monarch":{"xref_id":"0016602"}}}


id: PBO:0031118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_processing","termid":"PBO:0031118"}


id: PBO:0088408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway ATPase Sec18","termid":"PBO:0088408"}


id: PBO:0028032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_chromosome_fragmentation_upon_segregation","termid":"PBO:0028032"}


id: FYPO:0004929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which  the nucleus is broken into multiple small fragments, smaller than a normal nucleus, during the meiotic cell cycle.","definition_xrefs":["PMID:20410137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002403","FYPO:0001985"],"is_obsolete":false,"name":"fragmented nucleus during meiotic cell cycle","synonyms":[{"name":"fragmented DNA during meiotic cell cycle","type":"related"},{"name":"loss of nuclear integrity during meiotic cell cycle","type":"related"},{"name":"nuclear fragmentation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004929"}


id: PBO:0116595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXIM2 antisense RNA 2","termid":"PBO:0116595"}


id: GO:0005151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type II interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-1, type II receptor binding","synonyms":[{"name":"IL-1 type II","type":"narrow"},{"name":"interleukin-1, type II receptor ligand","type":"narrow"}],"termid":"GO:0005151"}


id: PBO:0087342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spermidine synthase; involved in biosynthesis of spermidine and also in biosynthesis of pantothenic acid; spermidine is required for growth of wild-type cells","termid":"PBO:0087342"}


id: GO:0043163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cell envelope, everything external to, but not including, the cytoplasmic membrane of bacteria, encompassing the periplasmic space, cell wall, and outer membrane if present.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell envelope organization","synonyms":[{"name":"cell envelope organisation","type":"exact"},{"name":"cell envelope organization and biogenesis","type":"related"}],"termid":"GO:0043163"}


id: PBO:0085644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in maintaining mitochondrial integrity and glutathione homeostasis; localized to the cytoplasm; in W303 strain IMI1 is encoded by one continuous open reading frame comprising of YDL037C, the intergenic region and YDL039C, while in the reference sequence of S288C, YDL037C encodes Bsc1p and YDL039C encodes Prm7p.","termid":"PBO:0085644"}


id: GO:0023044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which information is sent from one location to another, within a living organism or between living organisms, via a chemical mediator.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling via chemical mediator (obsolete GO:0023044)","synonyms":[{"name":"signaling via chemical mediator","type":"exact"},{"name":"signalling via chemical mediator","type":"exact"}],"termid":"GO:0023044"}


id: PBO:0048936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gon-4 like","termid":"PBO:0048936"}


id: PBO:0092014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b, Cob1","termid":"PBO:0092014"}


id: GO:0103098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 H+ + tetrahomomethionine + 2 O2 + 2 NADPH = 3 H2O + carbon dioxide + 2 NADP + 7-methylthioheptanaldoxime.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete CYP79F1 tetrahomomethionine monooxygenase activity (obsolete GO:0103098)","termid":"GO:0103098"}


id: FYPO:0003700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of snoRNA primary transcripts measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased snoRNA primary transcript level","synonyms":[{"name":"increased small nucleolar RNA primary transcript level","type":"exact"},{"name":"increased snoRNA primary transcript accumulation","type":"related"},{"name":"increased snoRNA primary transcript level during mitotic cell cycle","type":"related"},{"name":"increased snoRNA primary transcript level during vegetative growth","type":"exact"},{"name":"increased snoRNA transcript level","type":"broad"}],"termid":"FYPO:0003700"}


id: GO:0042707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into photoreceptor cell in the ocellus. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"},{"relation_name":"part_of","term_name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell fate commitment","termid":"GO:0042707"}


id: PBO:0055109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2527","termid":"PBO:0055109"}


id: PBO:0064661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4D","termid":"PBO:0064661"}


id: PBO:0069513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 782, pseudogene","termid":"PBO:0069513"}


id: PBO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B2","termid":"PBO:0043720"}


id: MONDO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"localized anterior staphyloma","secondary_identifiers":["UMLS:C0155362","MEDGEN:509936","DOID:13787","SCTID:21946002","ICD9:379.14"],"synonyms":[{"name":"anterior staphyloma, localised","type":"exact"},{"name":"anterior staphyloma, localized","type":"exact"}],"termid":"MONDO:0001799","xrefs":{"Monarch":{"xref_id":"0001799"}}}


id: PBO:0040500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A pseudogene 2","termid":"PBO:0040500"}


id: PBO:0047955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(19)(p13)","termid":"PBO:0047955"}


id: GO:0003993
data:
  {"annotated_genes":["SJAG_02405","SJAG_00711","SJAG_04067","SJAG_01667","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62910,74114,74321,78240,110035],"is_not":false,"summary":null,"term":"GO:0003993"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.","definition_xrefs":["EC:3.1.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00711":null,"SJAG_01667":null,"SJAG_01970":null,"SJAG_02405":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acid phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196950","MetaCyc:ACID-PHOSPHATASE-RXN"],"synonyms":[{"name":"acid monophosphatase activity","type":"related"},{"name":"acid nucleoside diphosphate phosphatase activity","type":"related"},{"name":"acid phosphohydrolase activity","type":"related"},{"name":"acid phosphomonoester hydrolase activity","type":"related"},{"name":"acid phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (acid optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (acid optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"},{"name":"uteroferrin","type":"related"}],"termid":"GO:0003993","terms_by_termid":{"GO:0003993":null}}


id: MONDO:1010530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, cattle","secondary_identifiers":["OMIA:000197-9913"],"termid":"MONDO:1010530","xrefs":{"Monarch":{"xref_id":"1010530"}}}


id: GO:0000822
data:
  {"annotated_genes":["SJAG_03847","SJAG_00233","SJAG_02591","SJAG_04131","SJAG_03325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71821,74457,90358,101104,103369],"is_not":false,"summary":null,"term":"GO:0000822"}]},"cv_name":"molecular_function","definition":"Binding to inositol hexakisphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_02591":null,"SJAG_03325":null,"SJAG_03847":null,"SJAG_04131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"inositol hexakisphosphate binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"IP6 binding","type":"exact"},{"name":"InsP6 binding","type":"exact"}],"termid":"GO:0000822","terms_by_termid":{"GO:0000822":null}}


id: MONDO:0011159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the COL11A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 13","secondary_identifiers":["MEDGEN:400917","DOID:0110545","GARD:18108","MESH:C566612","UMLS:C1866095","OMIM:601868"],"synonyms":[{"name":"COL11A2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA13","type":"narrow"},{"name":"autosomal dominant deafness 13","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 13","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in COL11A2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 13","type":"narrow"},{"name":"deafness, autosomal dominant 13","type":"narrow"},{"name":"deafness, autosomal dominant type 13","type":"narrow"}],"termid":"MONDO:0011159","xrefs":{"Monarch":{"xref_id":"0011159"}}}


id: MONDO:0014577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous mutation in the CEP120 gene on chromosome 5q23.","definition_xrefs":["PMID:25361962","DOID:0110093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 13 with or without polydactyly","secondary_identifiers":["MEDGEN:898712","GARD:16079","UMLS:C4225378","OMIM:616300"],"synonyms":[{"name":"SRTD13","type":"exact"},{"name":"short-rib thoracic dysplasia 13 with or without polydactyly","type":"exact"}],"termid":"MONDO:0014577","xrefs":{"Monarch":{"xref_id":"0014577"}}}


id: PBO:0073404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 7","termid":"PBO:0073404"}


id: PBO:0031701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_export","termid":"PBO:0031701"}


id: GO:0045930
data:
  {"annotated_genes":["SJAG_03371","SJAG_00526","SJAG_00640","SJAG_01855","SJAG_00457","SJAG_04699","SJAG_01010","SJAG_05346","SJAG_00169","SJAG_03602","SJAG_01068","SJAG_04280","SJAG_04140","SJAG_01146","SJAG_04394","SJAG_03126","SJAG_03353","SJAG_02074","SJAG_02332","SJAG_03681","SJAG_00486","SJAG_01605","SJAG_04287","SJAG_00082","SJAG_00071","SJAG_04126","SJAG_04597","SJAG_02723","SJAG_03486","SJAG_03501","SJAG_00600","SJAG_03720","SJAG_01044","SJAG_04259","SJAG_04671","SJAG_01118","SJAG_01311","SJAG_02336","SJAG_02392","SJAG_02858","SJAG_00991","SJAG_04999","SJAG_03927","SJAG_02162","SJAG_01205","SJAG_01956","SJAG_01429","SJAG_04682","SJAG_01677","SJAG_02563","SJAG_01297","SJAG_00145","SJAG_02026","SJAG_00996","SJAG_00327","SJAG_03591","SJAG_01084","SJAG_05373","SJAG_01837","SJAG_01076","SJAG_04332","SJAG_03067","SJAG_01708","SJAG_03026","SJAG_03529","SJAG_02169","SJAG_03048","SJAG_01210","SJAG_00318","SJAG_02771","SJAG_01679","SJAG_01330","SJAG_06592","SJAG_01873","SJAG_02098","SJAG_04813","SJAG_01680","SJAG_00429","SJAG_00623","SJAG_04943","SJAG_02451","SJAG_03073","SJAG_02576","SJAG_00883","SJAG_02266","SJAG_03898","SJAG_02404","SJAG_03854","SJAG_05288","SJAG_00364","SJAG_03942","SJAG_04884","SJAG_03160","SJAG_03695","SJAG_01401","SJAG_01082","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90095,94915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051728"},{"annotations":[90477,99376,103681,108054,113584,111757,115709,107032,114072],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[115813,89743,101223,94167,100323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[114273,115814,116041,79772,93323,77735,110995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[79174,100324,116611,98978,71913,99145,74494,116912,78594,115870,117085,70762,93720,109118,91187,106416,111832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[101409,102147,88690,108691,115711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[109471,91063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[115815,95611,98213,94299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[117524,89962,79037,91551,91188,99147,111527,116826,88867,100325,100838,106417,74944,71911,109119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[79042,74043,106418,111528,78928,99148,107466,91189,88868,78593,90199,94300,115872,73574,95773,111833,88913,102148,100645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"},{"annotations":[109708,106117,101586,115363,114305,99220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[106447,118176,105611,102151,109068,105769,104231],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110045"},{"annotations":[67516,102154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001100"},{"annotations":[91497,93088,91917,98660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[92974,108375,111618,114274,104287,93324,100783,94127,78226,92682,106448,106812,111233,112276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[116657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[108695,97547,102157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[93959],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[118042,116293],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140648"},{"annotations":[116484],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101412,108847,104712,94303],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110044"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle","termid":"GO:0045786"},{"relation_name":"negatively_regulates","term_name":"mitotic cell 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regulation of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8854050"],"synonyms":[{"name":"down regulation of progression through mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through mitotic cell cycle","type":"narrow"},{"name":"negative regulation of mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through mitotic cell cycle","type":"exact"}],"termid":"GO:0045930","terms_by_termid":{"GO:0001100":null,"GO:0007094":null,"GO:0007095":null,"GO:0010972":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0044773":null,"GO:0044878":null,"GO:0051728":null,"GO:0090267":null,"GO:0110044":null,"GO:0110045":null,"GO:0140499":null,"GO:0140648":null,"GO:1902426":null,"GO:1903464":null,"GO:1903467":null,"GO:2000134":null}}


id: PBO:0084729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein with similarity to Mdm31p; required for normal mitochondrial morphology and inheritance; interacts genetically with MMM1, MDM10, MDM12, and MDM34; variation between SK1 and S288C at residues 182 and 262 impacts invasive growth and mitochondrial network structure","termid":"PBO:0084729"}


id: PBO:0083400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF VMS1/YDR049W","termid":"PBO:0083400"}


id: PBO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 7","termid":"PBO:0043095"}


id: MONDO:0024471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-inflammatory vasculopathy (obsolete MONDO:0024471)","secondary_identifiers":["Orphanet:496924"],"termid":"MONDO:0024471","xrefs":{"Monarch":{"xref_id":"0024471"}}}


id: GO:0050419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxymandelonitrile = 4-hydroxybenzaldehyde + hydrocyanate.","definition_xrefs":["RHEA:15977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"hydroxymandelonitrile lyase activity","secondary_identifiers":["MetaCyc:HYDROXYMANDELONITRILE-LYASE-RXN","EC:4.1.2.11"],"synonyms":[{"name":"(S)-4-hydroxymandelonitrile 4-hydroxybenzaldehyde-lyase (cyanide-forming)","type":"related"},{"name":"(S)-4-hydroxymandelonitrile hydroxybenzaldehyde-lyase activity","type":"related"},{"name":"hydroxynitrile lyase activity","type":"broad"},{"name":"sorghum hydroxynitrile lyase activity","type":"related"}],"termid":"GO:0050419"}


id: FYPO:0002717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion is normal (i.e. indistinguishable from wild type) during a cellular response to a hypotonic environment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vacuole fusion during vegetative growth","termid":"FYPO:0002716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuole fusion during cellular hypotonic response","synonyms":[{"name":"normal homotypic vacuole fusion during cellular hypotonic response","type":"exact"},{"name":"normal vacuole fusion during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"normal vacuole fusion during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"normal vacuole fusion during hypotonic stress","type":"exact"},{"name":"normal vacuole fusion, non-autophagic, during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002717"}


id: PBO:0045737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBAG9 pseudogene 1","termid":"PBO:0045737"}


id: FYECO:0000360
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which terbinafine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ terbinafine","termid":"FYECO:0000360"}


id: MOD:01366
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site K","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01366"}


id: GO:0051142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer T cell proliferation.","definition_xrefs":["ISBN:0781735149","PMID:12154375","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell proliferation","termid":"GO:0046641"},{"relation_name":"is_a","term_name":"positive regulation of NK T cell activation","termid":"GO:0051135"},{"relation_name":"is_a","term_name":"regulation of NK T cell proliferation","termid":"GO:0051140"},{"relation_name":"positively_regulates","term_name":"NK T cell proliferation","termid":"GO:0001866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of NK T cell proliferation","synonyms":[{"name":"activation of NK T cell proliferation","type":"narrow"},{"name":"positive regulation of NK T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of NK T-cell proliferation","type":"exact"},{"name":"positive regulation of NK T-lymphocyte proliferation","type":"exact"},{"name":"positive regulation of NKT cell proliferation","type":"exact"},{"name":"positive regulation of NT cell proliferation","type":"exact"},{"name":"positive regulation of natural T cell proliferation","type":"exact"},{"name":"positive regulation of natural killer T cell proliferation","type":"exact"},{"name":"stimulation of NK T cell proliferation","type":"narrow"},{"name":"up regulation of NK T cell proliferation","type":"exact"},{"name":"up-regulation of NK T cell proliferation","type":"exact"},{"name":"upregulation of NK T cell proliferation","type":"exact"}],"termid":"GO:0051142"}


id: FYPO:0007021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a cytosine residue in a tRNA molecule to form 2'-O-methylcytidine does not occur.","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished tRNA cytosine 2'-O-methylation","synonyms":[{"name":"2'-O-methylcytidine absent from tRNA","type":"related"},{"name":"abolished tRNA 2'-O-methylcytidine formation","type":"exact"},{"name":"abolished tRNA Cm formation","type":"exact"},{"name":"abolished tRNA cytosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA cytosine 2'-O-methylation during vegetative growth","type":"exact"},{"name":"tRNA cytosine 2'-O-methylation abolished","type":"related"}],"termid":"FYPO:0007021"}


id: PBO:0054136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1502","termid":"PBO:0054136"}


id: MONDO:0042970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of glutamate decarboxylase activity.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of glutamate decarboxylase","secondary_identifiers":["MEDGEN:452941","ICD9:277.6","SCTID:124596009","UMLS:C1291560","GTR:AN0264281","GTR:AN0168165"],"synonyms":[{"name":"deficiency of glutamate decarboxylase","type":"exact"},{"name":"disorder of glutamate decarboxylase activity","type":"exact"},{"name":"glutamate decarboxylase activity disease","type":"exact"},{"name":"glutamate decarboxylase deficiency","type":"related"}],"termid":"MONDO:0042970","xrefs":{"Monarch":{"xref_id":"0042970"}}}


id: GO:0060735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a cellular response to double-stranded RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"part_of","term_name":"cellular response to dsRNA","termid":"GO:0071359"},{"relation_name":"regulates","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of eIF2 alpha phosphorylation by dsRNA","synonyms":[{"name":"regulation of eIF2 alpha phosphorylation by PKR","type":"narrow"},{"name":"regulation of eIF2 alpha phosphorylation by double-stranded RNA","type":"exact"}],"termid":"GO:0060735"}


id: MONDO:0006396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the glandular epithelium of the rectal mucosa. It is characterized by a villous architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C4919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"rectum adenoma","termid":"MONDO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal villous adenoma","secondary_identifiers":["MEDGEN:152675","UMLS:C0730199","EFO:1000506","SCTID:312823001"],"synonyms":[{"name":"rectal villous adenoma","type":"exact"},{"name":"rectum villous adenoma","type":"exact"},{"name":"villous adenoma of rectum","type":"exact"},{"name":"villous adenoma of the rectum","type":"exact"}],"termid":"MONDO:0006396","xrefs":{"Monarch":{"xref_id":"0006396"}}}


id: GO:1901652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to peptide","termid":"GO:1901652"}


id: PBO:0064955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 7","termid":"PBO:0064955"}


id: SO:0001596
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within a transcript that changes the secondary structure of the RNA product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_secondary_structure_variant","synonyms":[{"name":"transcript secondary structure variant","type":"exact"}],"termid":"SO:0001596"}


id: GO:0042824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, multisubunit complex which consists of the MHC class I-beta 2 microglobulin dimer, the transporter associated with antigen presentation (TAP), tapasin (an MHC-encoded membrane protein), the chaperone calreticulin and the thiol oxidoreductase ERp57. Functions in the assembly of peptides with newly synthesized MHC class I molecules.","definition_xrefs":["PMID:10631934","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005789","GO:0005783","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"MHC class I peptide loading complex","synonyms":[{"name":"PLC","type":"related"},{"name":"peptide-loading complex","type":"exact"}],"termid":"GO:0042824"}


id: MONDO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of cystic structures lined by mucinous columnar epithelial cells.","definition_xrefs":["NCIT:C4512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cystadenoma","termid":"MONDO:0005183"},{"relation_name":"is_a","term_name":"mucinous cystadenoma","termid":"MONDO:0006859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous ovarian cystadenoma","secondary_identifiers":["DOID:3267","MEDGEN:91088","UMLS:C0346172","SCTID:119422004"],"synonyms":[{"name":"benign mucinous cystadenoma of ovary","type":"exact"},{"name":"benign mucinous cystadenoma of the ovary","type":"exact"},{"name":"benign ovarian mucinous cystadenoma","type":"exact"},{"name":"mucinous cystadenoma of ovary","type":"exact"},{"name":"mucinous cystadenoma of the ovary","type":"exact"},{"name":"ovarian mucinous cystadenoma","type":"exact"},{"name":"ovary mucinous cystadenoma","type":"exact"}],"termid":"MONDO:0002583","xrefs":{"Monarch":{"xref_id":"0002583"}}}


id: PBO:0069117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 366, pseudogene","termid":"PBO:0069117"}


id: MONDO:0018616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central serous chorioretinopathy is a disease that causes fluid to build up under the retina, the back part of the inner eye that sends sight information to the brain. The fluid leaks from thechoroid (theblood vessel layer under the retina). The cause of this condition is unknown but stress can be a risk factor. Signs and symptoms include dim and blurred blind spot in the center of vision, distortion of straight linesand seeingobjectsas smaller or farther away. Many cases of central serous chorioretinopathy improve without treatment after 1-2 months. Laser treatment may be an option for other individuals.","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central serous chorioretinopathy","secondary_identifiers":["UMLS:C0730328","Orphanet:443079","SCTID:312956001","GARD:200","ICD9:362.41","icd11.foundation:1623925689","NCIT:C115124","MEDGEN:147591","MESH:D056833"],"synonyms":[{"name":"CSC","type":"exact"},{"name":"CSCR","type":"exact"},{"name":"central serous chorioretinopathy after bone marrow transplantation","type":"related"},{"name":"central serous choroidopathy","type":"related"},{"name":"central serous retinopathy","type":"exact"}],"termid":"MONDO:0018616","xrefs":{"Monarch":{"xref_id":"0018616"}}}


id: PBO:0042580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral dopamine neurotrophic factor","termid":"PBO:0042580"}


id: PBO:0071264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 9","termid":"PBO:0071264"}


id: GO:0014065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A series of reactions within the signal-receiving cell, mediated by the intracellular phosphatidylinositol 3-kinase (PI3K). Many cell surface receptor linked signaling pathways signal through PI3K to regulate numerous cellular functions.","definition_xrefs":["PMID:22525052","Wikipedia:PI3K","GOC:ef"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase signaling (obsolete GO:0014065)","synonyms":[{"name":"PI 3-kinase cascade","type":"exact"},{"name":"PI3K cascade","type":"exact"},{"name":"PI3K signal transduction","type":"exact"},{"name":"PI3K signaling","type":"exact"},{"name":"phosphatidylinositol 3-kinase cascade","type":"related"},{"name":"phosphatidylinositol 3-kinase signal transduction","type":"exact"},{"name":"phosphoinositide 3-kinase cascade","type":"exact"}],"termid":"GO:0014065"}


id: PBO:0062488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 4","termid":"PBO:0062488"}


id: GO:1903917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum stress-induced eIF2alpha dephosphorylation.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:11381086"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of endoplasmic reticulum stress-induced eIF2 alpha dephosphorylation (obsolete GO:1903917)","synonyms":[{"name":"activation of eIF2alpha dephosphorylation in response to ER stress","type":"narrow"},{"name":"activation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress-induced eIF2 alpha dephosphorylation","type":"exact"},{"name":"positive regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"positive regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"up regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"up-regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"upregulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903917"}


id: PBO:0073793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 1","termid":"PBO:0073793"}


id: PBO:0045635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 47 (pseudogene)","termid":"PBO:0045635"}


id: PBO:0051134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-6 (pseudogene)","termid":"PBO:0051134"}


id: MONDO:0011177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pure hair and nail ectodermal dysplasia in which the cause of the disease is a mutation in the KRT85 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 4, hair/nail type","secondary_identifiers":["GARD:18062","MEDGEN:870434","MESH:C566592","DOID:0111658","UMLS:C4024880","OMIM:602032"],"synonyms":[{"name":"ECTD4","type":"related"},{"name":"KRT85 pure hair and nail ectodermal dysplasia","type":"exact"},{"name":"ectodermal dysplasia 4, hair/nail type","type":"exact"},{"name":"ectodermal dysplasia, 'Pure' hair/nail type","type":"related"},{"name":"pili torti onychodysplasia","type":"related"},{"name":"pure hair and nail ectodermal dysplasia caused by mutation in KRT85","type":"exact"},{"name":"twisted hair with nail dysplasias","type":"related"}],"termid":"MONDO:0011177","xrefs":{"Monarch":{"xref_id":"0011177"}}}


id: GO:1904176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of carbon phosphorus lyase activity.","definition_xrefs":["GOC:bhm","PMID:23830682","GO_REF:0000088","PMID:22089136","GOC:TermGenie","PMID:17993513","PMID:21705661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"carbon phosphorus lyase complex","termid":"GO:1904176"}


id: PBO:0111345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein","termid":"PBO:0111345"}


id: PBO:0045223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C11","termid":"PBO:0045223"}


id: MONDO:0009585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"encephalopathy due to beta-mercaptolactate-cysteine disulfiduria","secondary_identifiers":["OMIM:249650","GARD:654","MEDGEN:208661","MESH:C563085","UMLS:C0796055","Orphanet:1035"],"synonyms":[{"name":"3-mercaptopyruvate sulfurtransferase deficiency","type":"exact"},{"name":"Ampola syndrome","type":"exact"},{"name":"Beta-mercaptolactate cysteine disulfiduria","type":"related"},{"name":"MCDU","type":"related"},{"name":"disulfiduria, mixed","type":"related"},{"name":"mercaptolactate-cysteine disulfiduria","type":"related"}],"termid":"MONDO:0009585","xrefs":{"Monarch":{"xref_id":"0009585"}}}


id: PBO:0043291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 10A","termid":"PBO:0043291"}


id: MONDO:0002807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumors or cancer of the bronchi.","definition_xrefs":["MESH:D001984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchial neoplasm","secondary_identifiers":["SCTID:126705004","EFO:1000849","NANDO:2200081","UMLS:C0006264","DOID:3906","HP:0030077","MEDGEN:2735"],"synonyms":[{"name":"bronchial neoplasm","type":"exact"},{"name":"bronchial neoplasm (disease)","type":"exact"},{"name":"bronchus neoplasm","type":"exact"},{"name":"bronchus neoplasm (disease)","type":"exact"},{"name":"bronchus tumor","type":"exact"},{"name":"bronchus tumour","type":"exact"},{"name":"neoplasm of bronchus","type":"exact"},{"name":"tumor of bronchus","type":"exact"},{"name":"tumour of bronchus","type":"exact"}],"termid":"MONDO:0002807","xrefs":{"Monarch":{"xref_id":"0002807"}}}


id: PBO:0055200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2625","termid":"PBO:0055200"}


id: MONDO:0012838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 9q32.","definition_xrefs":["DOID:0110896","PMID:18587394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 16","secondary_identifiers":["OMIM:612259","MEDGEN:383024","UMLS:C2677093","MESH:C567380"],"synonyms":[{"name":"IBD16","type":"exact"},{"name":"inflammatory bowel disease 16","type":"exact"},{"name":"inflammatory bowel disease type 16","type":"exact"}],"termid":"MONDO:0012838","xrefs":{"Monarch":{"xref_id":"0012838"}}}


id: PBO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon related developmental regulator 2","termid":"PBO:0050976"}


id: PBO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase Agn1","termid":"PBO:0002896"}


id: PBO:0079968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 6","termid":"PBO:0079968"}


id: PBO:0078746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10A","termid":"PBO:0078746"}


id: GO:0008046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular messenger and transmitting the signal from one side of the membrane to the other to results in a change in cellular activity involved in axon guidance.","definition_xrefs":["PMID:15107857","PMID:15339666","GOC:dph","GOC:signaling","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"axon guidance receptor activity","synonyms":[{"name":"receptor activity involved in axon guidance","type":"exact"}],"termid":"GO:0008046"}


id: PR:O74563
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase BRE1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04336","PRO:DNx","PANTHER:PTHR23163:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase brl2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.10c","secondary_identifiers":["UniProtKB:O74563"],"synonyms":[{"name":"BRE1-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RING finger protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNF20","type":"exact"}],"termid":"PR:O74563"}


id: GO:0009089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process","termid":"GO:0009085"},{"relation_name":"is_a","term_name":"diaminopimelate metabolic process","termid":"GO:0046451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0006520"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate","synonyms":[{"name":"diaminopimelate pathway","type":"exact"},{"name":"diaminopimelic acid pathway","type":"exact"},{"name":"lysine anabolism via diaminopimelate","type":"exact"},{"name":"lysine biosynthesis via diaminopimelic acid","type":"exact"},{"name":"lysine biosynthetic process via diaminopimelic acid","type":"exact"},{"name":"lysine formation via diaminopimelate","type":"exact"},{"name":"lysine synthesis via diaminopimelate","type":"exact"}],"termid":"GO:0009089"}


id: GO:0044377
data:
  {"annotated_genes":["SJAG_05153","SJAG_04009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106857,108615],"is_not":false,"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II, and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["GOC:pg","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"},{"relation_name":"is_a","term_name":"sequence-specific DNA binding, bending","termid":"GO:0044374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04009":null,"SJAG_05153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding, bending","type":"related"},{"name":"RNA polymerase II promoter proximal region sequence-specific DNA binding, bending","type":"related"},{"name":"RNA polymerase II proximal promoter region sequence-specific DNA binding, bending","type":"related"},{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding, bending","type":"related"}],"termid":"GO:0044377","terms_by_termid":{"GO:0044377":null}}


id: PBO:0003614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ/DUF1977 DNAJB12 homolog (predicted)","termid":"PBO:0003614"}


id: PBO:0066203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 4","termid":"PBO:0066203"}


id: FYPO:0000719
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119408],"is_not":false,"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal fatty acid synthase activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"synonyms":[{"name":"normal FAS activity","type":"exact"}],"termid":"FYPO:0000719","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: MONDO:0018566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-advanced bone age-early-onset osteoarthritis syndrome","secondary_identifiers":["UMLS:C5681177","MEDGEN:1811782","Orphanet:435804","GARD:17717"],"termid":"MONDO:0018566","xrefs":{"Monarch":{"xref_id":"0018566"}}}


id: PBO:0004535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSP1 family protein","termid":"PBO:0004535"}


id: GO:0031866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP3 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"EP3 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP3 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP3 receptor binding","type":"exact"}],"termid":"GO:0031866"}


id: MOD:01454
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-terminal L-proline residue and a strand of DNA at the C-1 of a ribose, freeing the nucleotide base and forming N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium.","definition_xrefs":["PubMed:9030608","PubMed:10833024","RESID:AA0494","PubMed:11847126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium","synonyms":[{"name":"(1Z,2S)-2-carboxy-1-[(3R,4R)-3,4-dihydroxy-5-(phosphonooxy)pentylidene]pyrrolidinium","type":"exact"},{"name":"DNA glycosylase proline Schiff base intermediate","type":"related"},{"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium","type":"exact"}],"termid":"MOD:01454"}


id: MONDO:0011778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia, Al-Gazali type is a skeletal dysplasia characterized by multiple epiphyseal dysplasia, macrocephaly and facial dysmorphism.","definition_xrefs":["Orphanet:166024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"},{"relation_name":"is_a","term_name":"KIF7-related ciliopathy","termid":"MONDO:0800463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia, Al-Gazali type","secondary_identifiers":["MESH:C564621","ICD10CM:Q77.3","SCTID:719688002","GARD:17014","icd11.foundation:1359939784","UMLS:C1846722","MEDGEN:335505","OMIM:607131"],"synonyms":[{"name":"AGBK","type":"related"},{"name":"AL-Gazali-BAKALINOVA syndrome","type":"related"},{"name":"Al-Gazali-Bakalinova syndrome","type":"related"},{"name":"Mmedf","type":"related"},{"name":"macrocephaly with multiple epiphyseal dysplasia and distinctive facies","type":"related"},{"name":"multiple epiphyseal dysplasia-macrocephaly-distinctive facies syndrome","type":"exact"}],"termid":"MONDO:0011778","xrefs":{"Monarch":{"xref_id":"0011778"}}}


id: GO:0071461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to redox state","synonyms":[{"name":"cellular redox signal response","type":"exact"}],"termid":"GO:0071461"}


id: FYPO:0007081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and normally occurs as part of the first meiotic nuclear division, does not occur.","definition_xrefs":["PomBase:mah","PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal initial meiotic spindle pole body separation in meiosis I","termid":"FYPO:0007080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abolished initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abolished initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abolished initial mitotic SPB separation in meiosis I","type":"exact"},{"name":"abolished meiotic spindle pole body separation during meiosis I","type":"exact"},{"name":"initial meiotic spindle pole body separation in meiosis I abolished","type":"exact"}],"termid":"FYPO:0007081"}


id: PBO:0088161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE component of the vacuolar SNARE complex; involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in the vacuolar membrane","termid":"PBO:0088161"}


id: MONDO:0859243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities","secondary_identifiers":["MEDGEN:1812577","OMIM:619854","UMLS:C5676975"],"termid":"MONDO:0859243","xrefs":{"Monarch":{"xref_id":"0859243"}}}


id: PBO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein (prediected)","termid":"PBO:0000451"}


id: PBO:0041868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 16, pseudogene","termid":"PBO:0041868"}


id: MONDO:0018267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"combined cervical dystonia","secondary_identifiers":["Orphanet:370114"],"termid":"MONDO:0018267","xrefs":{"Monarch":{"xref_id":"0018267"}}}


id: PBO:0058680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6808","termid":"PBO:0058680"}


id: GO:0042057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to transforming growth factor beta receptor and anchors it to a particular subcellular location.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor anchoring activity (obsolete GO:0042057)","synonyms":[{"name":"TGF-beta receptor anchoring activity","type":"exact"},{"name":"TGFbeta receptor anchoring activity","type":"exact"},{"name":"transforming growth factor beta receptor anchor activity","type":"exact"},{"name":"transforming growth factor beta receptor anchoring activity","type":"exact"}],"termid":"GO:0042057"}


id: GO:0018320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient methylation of peptidyl-cysteine to form S-methyl-L-cysteine.","definition_xrefs":["RESID:AA0234"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-methyl-L-cysteine (obsolete GO:0018320)","termid":"GO:0018320"}


id: MOD:02067
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-cysteine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}


id: GO:1901864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving capsorubin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00807","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"capsorubin metabolic process","synonyms":[{"name":"capsorubin metabolism","type":"exact"}],"termid":"GO:1901864"}


id: MONDO:0005095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inflammatory rheumatic diseases associated with arthritis and enthesitis, and often involving the axial skeleton. The most common form of spondyloarthritis is ankylosing spondylitis. Other forms include axial spondyloarthritis, peripheral spondyloarthritis, reactive arthritis, psoriatic arthritis/spondylitis and enteropathic arthritis/spondylitis.","definition_xrefs":["NCIT:C116778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"spondyloarthropathy","secondary_identifiers":["DOID:1123","EFO:0000706","MEDGEN:181888","MESH:D055009","SCTID:372109003","SCTID:8847002","UMLS:C0949691"],"synonyms":[{"name":"seronegative spondyloarthropathy","type":"exact"},{"name":"spondarthropathy","type":"exact"},{"name":"spondylarthropathy","type":"related"},{"name":"spondylarthrosis","type":"exact"},{"name":"spondyloarthritis","type":"exact"}],"termid":"MONDO:0005095","xrefs":{"Monarch":{"xref_id":"0005095"}}}


id: MONDO:0008045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy-progressive myoclonic epilepsy syndrome is characterized by hereditary myoclonus and progressive distal muscular atrophy. Less than 10 cases have been reported. Treatment with clonazepam results in complete and lasting improvement of the myoclonus.","definition_xrefs":["Orphanet:2590"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"variable age onset epilepsy","termid":"MONDO:0100036"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"ASAH1-related sphingolipidosis","termid":"MONDO:0100524"},{"relation_name":"is_a","term_name":"ASAH1-related disorders","termid":"MONDO:0800460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0002561","MONDO:0002525"],"is_obsolete":false,"name":"spinal muscular atrophy-progressive myoclonic epilepsy syndrome","secondary_identifiers":["MEDGEN:371854","MESH:C537563","OMIM:159950","SCTID:703524005","ICD9:345.10","UMLS:C1834569","DOID:0111527","GARD:3875"],"synonyms":[{"name":"Jankovic Rivera syndrome","type":"related"},{"name":"Jankovic-Rivera syndrome","type":"exact"},{"name":"SMAPME","type":"related"},{"name":"hereditary myoclonus and progressive distal muscular atrophy","type":"related"},{"name":"hereditary myoclonus-progressive distal muscular atrophy syndrome","type":"exact"},{"name":"myoclonus hereditary progressive distal muscular atrophy","type":"related"},{"name":"myoclonus, hereditary, with progressive distal muscular atrophy","type":"related"},{"name":"spinal muscular atrophy with progressive myoclonic epilepsy","type":"related"}],"termid":"MONDO:0008045","xrefs":{"Monarch":{"xref_id":"0008045"}}}


id: PBO:0089426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein, involved in splicing","termid":"PBO:0089426"}


id: PBO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acidosis","termid":"PBO:0001197"}


id: PBO:0005363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG ortholog Alp14","termid":"PBO:0005363"}


id: GO:0008649
data:
  {"annotated_genes":["SJAG_03877","SJAG_02281","SJAG_00943","SJAG_03016","SJAG_00722","SJAG_01958","SJAG_03332","SJAG_03289","SJAG_02417","SJAG_03008","SJAG_03773","SJAG_02350","SJAG_03713","SJAG_02821","SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73039,110001],"is_not":false,"summary":null,"term":"GO:0008649"},{"annotations":[68072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[94950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[76878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016433"},{"annotations":[98189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106142"},{"annotations":[59354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"},{"annotations":[95379,78715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[94661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070043"},{"annotations":[89376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[75452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070037"},{"annotations":[75635,75362,78375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[79252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a rRNA","termid":"GO:0140102"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00943":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02350":null,"SJAG_02417":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"rRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0008649","terms_by_termid":{"GO:0000179":null,"GO:0008649":null,"GO:0008650":null,"GO:0009383":null,"GO:0016433":null,"GO:0052907":null,"GO:0052909":null,"GO:0070037":null,"GO:0070039":null,"GO:0070042":null,"GO:0070043":null,"GO:0106142":null}}


id: GO:0061558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion maturation","termid":"GO:0061553"},{"relation_name":"part_of","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion maturation","synonyms":[{"name":"cranial ganglia maturation","type":"related"}],"termid":"GO:0061558"}


id: PBO:0074572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 28","termid":"PBO:0074572"}


id: GO:0019670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0006091","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"anaerobic glutamate catabolic process","synonyms":[{"name":"glutamate fermentation","type":"exact"}],"termid":"GO:0019670"}


id: GO:1901442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to furfural.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to furfural","termid":"GO:1901426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to furfural","termid":"GO:1901442"}


id: PBO:0043566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 4 pseudogene 1","termid":"PBO:0043566"}


id: PR:Q9UTI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- moa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTI4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolar attachment protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.07c","synonyms":[{"name":"Spom972h-moa1","type":"exact"},{"name":"meiotically up-regulated gene 159 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI4"}


id: FYPO:0004810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased, and the protein is instead visible in one or a few foci or dots in the cytoplasm.","definition_xrefs":["PMID:25543137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm","termid":"FYPO:0004056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"decreased protein localisation to nucleus, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasmic foci, during mitotic interphase","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"}],"termid":"FYPO:0004810"}


id: PR:Q9UU91
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A receptor expression-enhancing protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein yop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.08c","secondary_identifiers":["UniProtKB:Q9UU91"],"synonyms":[{"name":"SPCC830.08c","type":"related"},{"name":"Spom972h-REEP5","type":"exact"}],"termid":"PR:Q9UU91"}


id: PBO:0081161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein 2","termid":"PBO:0081161"}


id: MOD:01856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by rearrangement and condensation of a cysteine with the carbonyl of the preceding residue to form a 1,3-oxazole-4-carbothionic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"}


id: PR:Q9Y7R9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC306.11 gene.","definition_xrefs":["UniProtKB:Q9Y7R9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C306.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.11","synonyms":[{"name":"Spom972h-SPCC306.11","type":"exact"}],"termid":"PR:Q9Y7R9"}


id: GO:2000347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of hepatocyte proliferation","termid":"GO:2000345"},{"relation_name":"positively_regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte proliferation","termid":"GO:2000347"}


id: PBO:0039070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC catalytic component 2","termid":"PBO:0039070"}


id: PBO:0057808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-1","termid":"PBO:0057808"}


id: PATO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000685 relative incidence value (obsolete PATO:0000685)","termid":"PATO:0000685"}


id: GO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the iC3b product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement component iC3b receptor activity","termid":"GO:0001858"}


id: GO:0034851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethyl-3-oxopentanoyl-CoA + CoASH = pivalyl-CoA + propanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethyl-3-oxopentanoyl-CoA 2-C-propanoyl transferase activity (obsolete GO:0034851)","termid":"GO:0034851"}


id: PBO:0038544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 16A, phospholipase","termid":"PBO:0038544"}


id: PBO:0109387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 17B","termid":"PBO:0109387"}


id: MONDO:0011761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 6p24.1-p22.3.","definition_xrefs":["PMID:10764236","DOID:0110551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 21","secondary_identifiers":["MESH:C564634","GARD:18116","MEDGEN:339643","OMIM:607017","UMLS:C1846922"],"synonyms":[{"name":"DFNA21","type":"narrow"},{"name":"autosomal dominant deafness 21","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 21","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 21","type":"narrow"},{"name":"deafness, autosomal dominant 21","type":"narrow"}],"termid":"MONDO:0011761","xrefs":{"Monarch":{"xref_id":"0011761"}}}


id: MOD:01429
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a (15)N labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(15)N isotope tagged reagent","termid":"MOD:01429"}


id: PBO:0060545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 5","termid":"PBO:0060545"}


id: GO:1902567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of eosinophil activation","termid":"GO:1902566"},{"relation_name":"negatively_regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil activation","synonyms":[{"name":"down regulation of eosinophil activation","type":"exact"},{"name":"down-regulation of eosinophil activation","type":"exact"},{"name":"downregulation of eosinophil activation","type":"exact"},{"name":"inhibition of eosinophil activation","type":"narrow"}],"termid":"GO:1902567"}


id: GO:0043124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a canonical NF-kappaB signaling cascade.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of canonical NF-kappaB signal transduction","termid":"GO:0043122"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"canonical NF-kappaB signal transduction","termid":"GO:0007249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of canonical NF-kappaB signal transduction","synonyms":[{"name":"down regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"down-regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"downregulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"inhibition of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"negative regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"negative regulation of I-kappaB kinase/NF-kappaB signaling","type":"exact"}],"termid":"GO:0043124"}


id: MONDO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma characterized by the presence of atypical cartilage of variable cellularity. It may or may not be associated with the presence of myxoid areas or focal bone formation.","definition_xrefs":["NCIT:C4021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chondroblastic osteosarcoma","secondary_identifiers":["UMLS:C0279603","ICDO:9181/3","ONCOTREE:CHOS","MEDGEN:79013","DOID:3372"],"synonyms":[{"name":"CHOS","type":"related"},{"name":"chondroblastic osteogenic sarcoma","type":"exact"},{"name":"chondroblastic osteosarcoma","type":"exact"},{"name":"chondroblastic osteosarcoma (morphologic abnormality)","type":"exact"},{"name":"chondrosarcomatous osteogenic sarcoma","type":"exact"}],"termid":"MONDO:0002627","xrefs":{"Monarch":{"xref_id":"0002627"}}}


id: PBO:0027488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_G0","termid":"PBO:0027488"}


id: MONDO:0010539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked mandibulofacial dysostosis is an extremely rare multiple congenital abnormality syndrome that is characterized by microcephaly, malar hypoplasia with downslanting palpebral fissures, highly arched palate, apparently low-set and protruding ears, micrognathia, short stature, bilateral hearing loss, and learning disability. Occasionally, additional features have been observed such as bilateral cryptorchidism, cardiac valvular lesions, body asymmetry, and pectus excavatum.","definition_xrefs":["Orphanet:1131"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete branchial arch or oral-acral syndrome (obsolete MONDO:0015334)","termid":"MONDO:0015334"},{"relation_name":"excluded_subClassOf","term_name":"mandibulofacial dysostosis","termid":"MONDO:0015483"},{"relation_name":"excluded_subClassOf","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mandibulofacial dysostosis","termid":"MONDO:0015483"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked mandibulofacial dysostosis","secondary_identifiers":["UMLS:C1844918","MESH:C537102","MEDGEN:375543","GARD:1002","icd11.foundation:135565112","OMIM:301950","SCTID:719813003"],"synonyms":[{"name":"MFD Toriello type","type":"related"},{"name":"X-linked branchial arch syndrome","type":"exact"},{"name":"X-linked mandibulofacial dysostosis with limb anomalies","type":"exact"},{"name":"branchial arch syndrome X-linked","type":"related"},{"name":"branchial arch syndrome, X-linked","type":"related"},{"name":"mandibulofacial dysostosis Toriello type","type":"related"},{"name":"mandibulofacial dysostosis, Toriello type","type":"exact"},{"name":"mandibulofacial dysostosis, X-linked","type":"exact"}],"termid":"MONDO:0010539","xrefs":{"Monarch":{"xref_id":"0010539"}}}


id: GO:0007218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a neuropeptide binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuropeptide signaling pathway","synonyms":[{"name":"neuropeptide signalling pathway","type":"exact"}],"termid":"GO:0007218"}


id: MONDO:0015428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choroidal atrophy - alopecia is a very rare ectodermal dysplasia syndrome, characterized by the association of choroidal atrophy (sometimes regional), together with other ectodermal dysplasia features including fine and sparse hair, absent or decreased lashes and eyebrows, and possibly mild visual loss and dysplastic/thick/grooved nails.","definition_xrefs":["Orphanet:1433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"choroidal atrophy-alopecia syndrome","secondary_identifiers":["MESH:C535810","UMLS:C2931026","SCTID:720850008","GARD:3704","MEDGEN:419316"],"synonyms":[{"name":"Moloney syndrome","type":"exact"},{"name":"choroidal atrophy alopecia","type":"related"},{"name":"fine hair, absent/decreased lashes, absent/decreased eyebrows, visual loss-mild/suspected, dysplastic/thick/grooved toenails and fingernails","type":"related"},{"name":"regional choroidal atrophy and alopecia","type":"exact"}],"termid":"MONDO:0015428","xrefs":{"Monarch":{"xref_id":"0015428"}}}


id: PBO:0091325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase Cir2","termid":"PBO:0091325"}


id: PR:O43079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1 complex subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11134:SF3","OMA:SCHPO02550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit beta-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.02","secondary_identifiers":["UniProtKB:O43079"],"synonyms":[{"name":"Spom972h-AP1B1","type":"exact"},{"name":"beta(1)-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-1-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 1 beta-1 large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large beta-1 chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43079"}


id: PBO:0038291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_type","termid":"PBO:0038291"}


id: MONDO:0014138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive myopathy caused by mutations in the KLHL40 gene, encoding Kelch-like protein 40. The phenotype is highly variable, and as such attempts at classification by clinical features is not optimal. Generally, affected individuals have generalized muscle weakness, and typically involves proximal muscles, the face, bulbar and respiratory muscles.","definition_xrefs":["NCIT:C129871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 8","secondary_identifiers":["DOID:0110930","UMLS:C3809209","OMIM:615348","GARD:15946","MEDGEN:815539"],"synonyms":[{"name":"KLHL40 nemaline myopathy","type":"exact"},{"name":"NEM8","type":"exact"},{"name":"nemaline myopathy 8","type":"exact"},{"name":"nemaline myopathy 8, autosomal recessive","type":"exact"},{"name":"nemaline myopathy caused by mutation in KLHL40","type":"exact"},{"name":"nemaline myopathy type 8","type":"exact"}],"termid":"MONDO:0014138","xrefs":{"Monarch":{"xref_id":"0014138"}}}


id: PBO:0005654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/UAS domain protein Ucp10 (predicted)","termid":"PBO:0005654"}


id: PBO:0033799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_subtelomeric_heterochromatin","termid":"PBO:0033799"}


id: PBO:0072836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 divergent transcript","termid":"PBO:0072836"}


id: PBO:0043787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase E","termid":"PBO:0043787"}


id: GO:0048081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cuticle pigmentation","termid":"GO:0048079"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cuticle pigmentation","synonyms":[{"name":"activation of cuticle pigmentation","type":"narrow"},{"name":"stimulation of cuticle pigmentation","type":"narrow"},{"name":"up regulation of cuticle pigmentation","type":"exact"},{"name":"up-regulation of cuticle pigmentation","type":"exact"},{"name":"upregulation of cuticle pigmentation","type":"exact"}],"termid":"GO:0048081"}


id: PBO:0058788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7157","termid":"PBO:0058788"}


id: GO:0046959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A decrease in a behavioral response to a repeated stimulus. This is exemplified by the failure of a person to show a startle response to a loud noise that has been repeatedly presented.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"habituation","secondary_identifiers":["Wikipedia:Habituation"],"termid":"GO:0046959"}


id: PBO:0071806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 1","termid":"PBO:0071806"}


id: PBO:0059534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription terminator","termid":"PBO:0059534"}


id: PBO:0062743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 2 pseudogene","termid":"PBO:0062743"}


id: FYPO:0003979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes, a single, normally located septum, and 1C DNA content in each nucleus, under conditions where arrest does not normally occur.","definition_xrefs":["PMID:8313905","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell","termid":"FYPO:0004719"},{"relation_name":"output_of","term_name":"abnormal exit from mitosis","termid":"FYPO:0003972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000337","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell with 1C DNA content per nucleus","synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes, septated cell with 1C DNA content per nucleus during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell with 1C DNA content per nucleus during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell with 1C nuclei","type":"exact"}],"termid":"FYPO:0003979"}


