# terms

id: SOFP:owner
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"owner","termid":"SOFP:owner"}


id: PBO:0072306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 3","termid":"PBO:0072306"}


id: FYPO:0002144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation at Thr-Pro site during vegetative growth (obsolete FYPO:0002144)","synonyms":[{"name":"increased protein threonine phosphorylation at TP site during vegetative growth","type":"exact"},{"name":"increased protein threonine phosphorylation at Thr-Pro site during mitotic cell cycle","type":"related"},{"name":"increased protein threonine phosphorylation at threonine-proline site during vegetative growth","type":"exact"}],"termid":"FYPO:0002144"}


id: MOD:00430
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups.","definition_xrefs":["PubMed:3145979","PubMed:4304194","Unimod:37","PubMed:12590383","PubMed:7093227","PubMed:8453381","PubMed:6778808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated residue","synonyms":[{"name":"Me3Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00430"}


id: PATO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a parent.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000059 parental quality (obsolete PATO:0000059)","synonyms":[{"name":"parental type","type":"exact"}],"termid":"PATO:0000059"}


id: GO:1905482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cytoplasmic sequestering of protein that is involved in G2 DNA damage checkpoint.","definition_xrefs":["GO_REF:0000060","PMID:10523629","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of protein involved in G2 DNA damage checkpoint (obsolete GO:1905482)","termid":"GO:1905482"}


id: PBO:0086113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for clearance of inclusion bodies; localizes to the inclusion bodies formed under protein misfolding stress; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress; IML2 has a paralog, YKR018C, that arose from the whole genome duplication","termid":"PBO:0086113"}


id: PBO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 family regulatory subunit (predicted)","termid":"PBO:0004111"}


id: PBO:0048566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamylamine cyclotransferase","termid":"PBO:0048566"}


id: GO:0062180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: calcidiol + 2 H+ + O2 + 2 reduced [adrenodoxin] = (23S)-23,25-dihydroxycalciol + H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:30205156","PMID:22100522","RHEA:46616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"25-hydroxycholecalciferol-23-hydroxylase activity","termid":"GO:0062180"}


id: MONDO:1011590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, dog","secondary_identifiers":["OMIA:000817-9615"],"termid":"MONDO:1011590","xrefs":{"Monarch":{"xref_id":"1011590"}}}


id: PR:Q9UUH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC630.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUH5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.07c","synonyms":[{"name":"Spom972h-SPAC630.07c","type":"exact"}],"termid":"PR:Q9UUH5"}


id: MONDO:0003984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the internal auditory canal, often presenting as an acoustic tumor. It may be intermixed with the vestibulocochlear nerve and may adhere to adjacent structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of ear","termid":"MONDO:0021474"},{"relation_name":"is_a","term_name":"inner ear neoplasm","termid":"MONDO:0024320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal auditory canal lipoma","secondary_identifiers":["MEDGEN:232658","NCIT:C5452","DOID:6752","UMLS:C1334226"],"synonyms":[{"name":"inner Ear lipoma","type":"exact"},{"name":"internal Ear lipoma","type":"exact"},{"name":"internal acoustic meatus lipoma","type":"exact"},{"name":"lipoma of internal acoustic meatus","type":"exact"},{"name":"lipoma of internal auditory canal","type":"exact"},{"name":"lipoma of the internal auditory canal","type":"exact"}],"termid":"MONDO:0003984","xrefs":{"Monarch":{"xref_id":"0003984"}}}


id: GO:0046864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of isoprenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Isoprenoids comprise a group of compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"isoprenoid transport","termid":"GO:0046864"}


id: PBO:0078341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 7-1","termid":"PBO:0078341"}


id: PBO:0049043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 34","termid":"PBO:0049043"}


id: PBO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i2","termid":"PBO:0048789"}


id: GO:0009534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid","termid":"GO:0031976"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast thylakoid","termid":"GO:0009534"}


id: PBO:0066597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOQ antisense RNA 1","termid":"PBO:0066597"}


id: PBO:0038528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 2, acylglycerol lipase","termid":"PBO:0038528"}


id: PBO:0018182
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HMG1","termid":"PBO:0018182"}


id: MONDO:1011707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia, non-human animal","secondary_identifiers":["OMIA:002300"],"termid":"MONDO:1011707","xrefs":{"Monarch":{"xref_id":"1011707"}}}


id: PBO:0044490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 4, pseudogene","termid":"PBO:0044490"}


id: PBO:0041417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 alpha chain","termid":"PBO:0041417"}


id: GO:0060179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of a male organism that is associated with reproduction.","definition_xrefs":["GOC:tb","GOC:pr","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male mating behavior","termid":"GO:0060179"}


id: MONDO:0020154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microblepharon-ablephara syndrome (obsolete MONDO:0020154)","secondary_identifiers":["Orphanet:98563"],"termid":"MONDO:0020154","xrefs":{"Monarch":{"xref_id":"0020154"}}}


id: PBO:0003295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex subunit beta subunit Apl2","termid":"PBO:0003295"}


id: PBO:0055947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 56","termid":"PBO:0055947"}


id: MONDO:0006717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, intermediate, or malignant mesenchymal neoplasm composed of fibrohistiocytic cells, spindle fibroblastic cells, and histiocytes, in a storiform pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"benign fibrous histiocytoma","termid":"MONDO:0002989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous fibrous histiocytoma","secondary_identifiers":["EFO:1000885","MEDGEN:1930","NCIT:C6801","UMLS:C0002991","DOID:4418","ONCOTREE:DF","ICDO:8832/0","SCTID:448015002"],"synonyms":[{"name":"DF","type":"related"},{"name":"benign cutaneous fibrous histiocytoma","type":"exact"},{"name":"benign fibrous cutaneous histiocytoma","type":"exact"},{"name":"benign fibrous histiocytoma of skin","type":"exact"},{"name":"benign fibrous histiocytoma of the skin","type":"exact"},{"name":"benign skin fibrous histiocytoma","type":"exact"},{"name":"cutaneous fibrous histiocytoma","type":"exact"},{"name":"dermatofibroma","type":"exact"},{"name":"dermatofibroma, no ICD-O subtype","type":"exact"},{"name":"dermatofibroma, no ICD-O subtype (morphologic abnormality)","type":"exact"},{"name":"fibrohistiocytic neoplasm","type":"exact"},{"name":"fibrohistiocytic tumor","type":"related"},{"name":"fibrohistiocytic tumour","type":"related"},{"name":"fibrous histiocytoma of skin","type":"exact"},{"name":"fibrous histiocytoma of the skin","type":"exact"},{"name":"fibrous xanthoma of skin","type":"exact"},{"name":"pleomorphic fibroma","type":"related"},{"name":"sclerosing angioma","type":"exact"},{"name":"sclerosing angioma (morphologic abnormality)","type":"exact"},{"name":"sclerosing angioma of skin","type":"exact"}],"termid":"MONDO:0006717","xrefs":{"Monarch":{"xref_id":"0006717"}}}


id: PBO:0054626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2031","termid":"PBO:0054626"}


id: GO:0060662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the solid core of salivary epithelium gives rise to the hollow tube of the gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube lumen cavitation","termid":"GO:0060605"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salivary gland cavitation","synonyms":[{"name":"salivary gland invagination","type":"exact"}],"termid":"GO:0060662"}


id: MONDO:1012437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fluoroquinolone-induced retinal degeneration, non-human animal","termid":"MONDO:1011994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoroquinolone-induced retinal degeneration, domestic cat","secondary_identifiers":["OMIA:001707-9685"],"termid":"MONDO:1012437","xrefs":{"Monarch":{"xref_id":"1012437"}}}


id: PBO:0090238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid particle hydrolase","termid":"PBO:0090238"}


id: PATO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000990 consistent (obsolete PATO:0000990)","termid":"PATO:0000990"}


id: MONDO:0859285
data:
  {"annotated_genes":["SJAG_02750"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85479],"is_not":false,"summary":null,"term":"MONDO:0859285"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, short stature, and speech delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774211","OMIM:620027","MEDGEN:1823984"],"termid":"MONDO:0859285","terms_by_termid":{"MONDO:0859285":null},"xrefs":{"Monarch":{"xref_id":"0859285"}}}


id: GO:0052488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity (obsolete GO:0052488)","synonyms":[{"name":"negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor-induced symbiont innate immunity","type":"exact"},{"name":"suppression of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"}],"termid":"GO:0052488"}


id: GO:2001034
data:
  {"annotated_genes":["SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107206],"is_not":false,"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of double-strand break repair","termid":"GO:2000781"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair via nonhomologous end joining","termid":"GO:2001032"},{"relation_name":"positively_regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of NHEJ","type":"exact"}],"termid":"GO:2001034","terms_by_termid":{"GO:2001034":null}}


id: PBO:0058315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4688","termid":"PBO:0058315"}


id: PBO:0083593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR069C has a paralog, YHR214C-D, that arose from a segmental duplication","termid":"PBO:0083593"}


id: PBO:0061818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 8 Y-linked","termid":"PBO:0061818"}


id: MONDO:0005656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the order ascaridida.","definition_xrefs":["MESH:D017191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ascaridida infectious disease","synonyms":[{"name":"Ascaridida caused disease or disorder","type":"exact"},{"name":"Ascaridida disease or disorder","type":"exact"},{"name":"Ascaridida infection","type":"related"},{"name":"infection, Ascaridida","type":"related"},{"name":"infections, Ascaridida","type":"related"}],"termid":"MONDO:0005656","xrefs":{"Monarch":{"xref_id":"0005656"}}}


id: FYPO:0004223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which monomethylation of lysine at position 20 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H4-K20 monomethylation during vegetative growth","synonyms":[{"name":"increased histone H4-K20 monomethylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K20 monomethylation during vegetative growth","type":"exact"},{"name":"increased histone H4K20me1 during vegetative growth","type":"exact"},{"name":"increased histone lysine H4-K20 monomethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004223"}


id: MONDO:0011053
data:
  {"annotated_genes":["SJAG_04755","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85987,85988],"is_not":false,"summary":null,"term":"MONDO:0011053"}]},"cv_name":"mondo","definition":"Intellectual disability-sparse hair-brachydactyly syndrome is a very rare condition of unknown etiology consisting of short stature, hypotrichosis, brachydactyly with cone-shaped epiphyses, epilepsy and severe mental delay. After the initial delineation of this syndrome by Nicolaides and Baraitser in 1993, only five more patients were published in the literature up to now.","definition_xrefs":["Orphanet:3051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability-sparse hair-brachydactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536116","OMIM:601358","DOID:0081441","SCTID:401046009","UMLS:C1303073","GARD:270","MEDGEN:220983"],"synonyms":[{"name":"NBs","type":"related"},{"name":"NCBRS","type":"related"},{"name":"NICOLAIDES-Baraitser syndrome","type":"related"},{"name":"Nicolaides-Baraitser syndrome","type":"exact"},{"name":"SMARCA2-related BAFopathy","type":"exact"},{"name":"intellectual disability-sparse hair-brachydactyly syndrome","type":"exact"},{"name":"sparse hair and intellectual disability","type":"related"},{"name":"sparse hair and mental retardation","type":"related"}],"termid":"MONDO:0011053","terms_by_termid":{"MONDO:0011053":null},"xrefs":{"Monarch":{"xref_id":"0011053"}}}


id: MONDO:0023671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngodistal myopathy","termid":"MONDO:0025193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngodistal myopathy 3","secondary_identifiers":["UMLS:C5561956","MEDGEN:1794166","OMIM:619473","DOID:0081299"],"synonyms":[{"name":"OPDM3","type":"exact"}],"termid":"MONDO:0023671","xrefs":{"Monarch":{"xref_id":"0023671"}}}


id: PBO:0072530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 60","termid":"PBO:0072530"}


id: PR:O13612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep2 gene.","definition_xrefs":["UniProtKB:O13612","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.02c","synonyms":[{"name":"Spom972h-nep2","type":"exact"},{"name":"meiotically up-regulated gene 120 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13612"}


id: GO:0009627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The salicylic acid-mediated response to a pathogen which confers broad spectrum resistance.","definition_xrefs":["GOC:lr","Wikipedia:Systemic_acquired_resistance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"systemic acquired resistance","synonyms":[{"name":"salicylic acid-dependent systemic resistance","type":"exact"}],"termid":"GO:0009627"}


id: PBO:0004353
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia","termid":"PBO:0004353"}


id: MONDO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ischemic bone disease (obsolete MONDO:0000835)","termid":"MONDO:0000835","xrefs":{"Monarch":{"xref_id":"0000835"}}}


id: PBO:0000815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotranferase/ diacylglycerol ethanolaminesphotranferase (predicted)","termid":"PBO:0000815"}


id: MONDO:0015954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic headache disorder (obsolete MONDO:0015954)","secondary_identifiers":["Orphanet:183509"],"synonyms":[{"name":"rare genetic headache","type":"exact"}],"termid":"MONDO:0015954","xrefs":{"Monarch":{"xref_id":"0015954"}}}


id: PBO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 5","termid":"PBO:0052598"}


id: PBO:0069504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 771, pseudogene","termid":"PBO:0069504"}


id: PBO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 18","termid":"PBO:0060071"}


id: GO:2000338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-X-C motif) ligand 1 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 1 production","termid":"GO:0072566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"regulation of CXCL1 production","type":"exact"},{"name":"regulation of KC production","type":"exact"},{"name":"regulation of SCYB1 production","type":"exact"},{"name":"regulation of keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:2000338"}


id: PR:Q09719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX54 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24031:SF17","PRO:DNx","OMA:SCHPO00156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.07c","secondary_identifiers":["UniProtKB:Q09719"],"synonyms":[{"name":"Spom972h-DDX54","type":"exact"}],"termid":"PR:Q09719"}


id: PBO:0057038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR130A host gene","termid":"PBO:0057038"}


id: PBO:0055113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2532","termid":"PBO:0055113"}


id: PATO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality inhering in a bearer by virtue of the bearer's lacking focus.","definition_xrefs":["PATOC:NC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focus","termid":"PATO:0001516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blurry","termid":"PATO:0001518"}


id: PBO:0077015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin 3","termid":"PBO:0077015"}


id: PR:Q9P7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap62 gene.","definition_xrefs":["UniProtKB:Q9P7L8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.05","synonyms":[{"name":"Spom972h-sap62","type":"exact"},{"name":"spliceosome-associated protein 62 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L8"}


id: MONDO:1010574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, dog","secondary_identifiers":["OMIA:000279-9615"],"termid":"MONDO:1010574","xrefs":{"Monarch":{"xref_id":"1010574"}}}


id: PR:Q9UTL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol-glycan biosynthesis class W protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01933","PRO:DNx","PANTHER:PTHR20661:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored wall transfer protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.10c","secondary_identifiers":["UniProtKB:Q9UTL4"],"synonyms":[{"name":"Spom972h-PIGW","type":"exact"},{"name":"meiotically up-regulated gene 59 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTL4"}


id: PBO:0081986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 12 pseudogene 1","termid":"PBO:0081986"}


id: PBO:0005781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase alpha subunit (predicted)","termid":"PBO:0005781"}


id: GO:0050008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isopiperitenone = piperitenone.","definition_xrefs":["RHEA:21516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"isopiperitenone delta-isomerase activity","secondary_identifiers":["MetaCyc:ISOPIPERITENONE-DELTA-ISOMERASE-RXN","EC:5.3.3.11","KEGG_REACTION:R03782"],"synonyms":[{"name":"isopiperitenone D-isomerase activity","type":"exact"},{"name":"isopiperitenone delta8-delta4-isomerase activity","type":"related"}],"termid":"GO:0050008"}


id: PBO:0066168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 1","termid":"PBO:0066168"}


id: PBO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_protein_movement_within_plasma_membrane_at_cell_tip","termid":"PBO:0035860"}


id: PBO:0086728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene; YPL216W has a paralog, ITC1, that arose from the whole genome duplication","termid":"PBO:0086728"}


id: GO:1900971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sarcinapterin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin metabolic process","termid":"GO:1900968"},{"relation_name":"regulates","term_name":"sarcinapterin biosynthetic process","termid":"GO:1900868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0044281","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"regulation of sarcinapterin biosynthetic process","synonyms":[{"name":"regulation of sarcinapterin anabolism","type":"exact"},{"name":"regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"regulation of sarcinapterin formation","type":"exact"},{"name":"regulation of sarcinapterin synthesis","type":"exact"}],"termid":"GO:1900971"}


id: PBO:0044026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 subunit alpha' interacting protein","termid":"PBO:0044026"}


id: GO:1905083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial translational elongation.","definition_xrefs":["PMID:25738458","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"negative regulation of mitochondrial translation","termid":"GO:0070130"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational elongation","termid":"GO:1905082"},{"relation_name":"negatively_regulates","term_name":"mitochondrial translational elongation","termid":"GO:0070125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"negative regulation of mitochondrial translational elongation","synonyms":[{"name":"down regulation of mitochondrial translation elongation","type":"exact"},{"name":"down regulation of mitochondrial translational elongation","type":"exact"},{"name":"down-regulation of mitochondrial translation elongation","type":"exact"},{"name":"down-regulation of mitochondrial translational elongation","type":"exact"},{"name":"downregulation of mitochondrial translation elongation","type":"exact"},{"name":"downregulation of mitochondrial translational elongation","type":"exact"},{"name":"inhibition of mitochondrial translation elongation","type":"narrow"},{"name":"inhibition of mitochondrial translational elongation","type":"narrow"},{"name":"negative regulation of mitochondrial translation elongation","type":"exact"}],"termid":"GO:1905083"}


id: PBO:0039266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 18 family member A1","termid":"PBO:0039266"}


id: GO:0044426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall part (obsolete GO:0044426)","termid":"GO:0044426"}


id: PBO:0064998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 5","termid":"PBO:0064998"}


id: GO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose binding lectin (obsolete GO:0005531)","synonyms":[{"name":"galactose binding lectin","type":"exact"}],"termid":"GO:0005531"}


id: MONDO:1012794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in cats due to a mutation in the HPS5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, HPS5-related, domestic cat","secondary_identifiers":["OMIA:002116-9685"],"synonyms":[{"name":"coat colour, albinism, oculocutaneous, HPS5-related in Felis catus (domestic cat)","type":"exact"},{"name":"pink-eye, cat","type":"related"}],"termid":"MONDO:1012794","xrefs":{"Monarch":{"xref_id":"1012794"}}}


id: GO:1901732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quercetin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin metabolic process","synonyms":[{"name":"quercetin metabolism","type":"exact"}],"termid":"GO:1901732"}


id: MOD:00767
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a carbohydrate carbonyl group (C1 of aldohexose or C2 of fructose) and a protein amino group to form a Schiff-base or an Amadori ketosamine residue adduct.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"glycated residue","termid":"MOD:00767"}


id: GO:1904473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-dopa stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:25044243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"},{"relation_name":"is_a","term_name":"response to L-phenylalanine derivative","termid":"GO:1904386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-dopa","termid":"GO:1904473"}


id: GO:0090209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.","definition_xrefs":["GOC:dph","GOC:sl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of triglyceride metabolic process","termid":"GO:0090207"},{"relation_name":"negatively_regulates","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of triglyceride metabolic process","termid":"GO:0090209"}


id: GO:0008209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"androgen metabolic process","synonyms":[{"name":"androgen metabolism","type":"exact"}],"termid":"GO:0008209"}


id: GO:0033409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"UAU codon-amino acid adaptor activity","synonyms":[{"name":"TAT codon-amino acid adaptor activity","type":"exact"},{"name":"tyrosine tRNA","type":"related"}],"termid":"GO:0033409"}


id: PBO:0027160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_glucose_starvation","termid":"PBO:0027160"}


id: PBO:0074130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 31 member 2","termid":"PBO:0074130"}


id: GO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of kinin cascade","termid":"GO:0002256"}


id: GO:0010320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide linkages in oligopeptides or polypeptides by a reaction mechanism in which arginine or lysine residues act as nucleophiles.","definition_xrefs":["GOC:tair_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete arginine/lysine endopeptidase activity (obsolete GO:0010320)","synonyms":[{"name":"arginine/lysine endopeptidase activity","type":"exact"}],"termid":"GO:0010320"}


id: PBO:0042946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2","termid":"PBO:0042946"}


id: FYPO:0003957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of two methyl groups to the N2 position of a guanine residue in a tRNA molecule is abolished. Normally, two methyl groups are transferred to the G26 residue.","definition_xrefs":["PomBase:mah","PMID:10611485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"},{"relation_name":"is_a","term_name":"abolished tRNA modification","termid":"FYPO:0008344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abolished tRNA guanosine N2,N2-dimethylation","synonyms":[{"name":"abolished tRNA N2,N2-dimethylguanosine formation","type":"exact"},{"name":"abolished tRNA N2-guanine dimethylation","type":"exact"},{"name":"abolished tRNA N2-guanine methylation","type":"related"},{"name":"abolished tRNA dimethylation at N2 on G26","type":"narrow"},{"name":"abolished tRNA guanosine N2,N2-dimethylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA guanosine N2,N2-dimethylation during vegetative growth","type":"exact"},{"name":"abolished tRNA m2,2G formation","type":"exact"},{"name":"tRNA guanosine N2,N2-dimethylation abolished","type":"exact"}],"termid":"FYPO:0003957"}


id: GO:2000375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of oxygen metabolic process","termid":"GO:2000374"},{"relation_name":"negatively_regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxygen metabolic process","synonyms":[{"name":"negative regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"negative regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000375"}


id: PBO:0005639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Cox18","termid":"PBO:0005639"}


id: PBO:0086605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression repressed in carbon limited vs carbon replete chemostat cultures; non-essential gene; contains a PH-like domain; RBH2 has a paralog, RBH1, that arose from the whole genome duplication","termid":"PBO:0086605"}


id: MONDO:1010814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, pig","secondary_identifiers":["OMIA:000810-9823"],"termid":"MONDO:1010814","xrefs":{"Monarch":{"xref_id":"1010814"}}}


id: PBO:0073876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 4","termid":"PBO:0073876"}


id: PBO:0113292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear/ER membrane association and activation of Pah1p, a phosphatidate phosphatase involved in the production of diacylglycerol DAG for lipid droplet biogenesis; regulates nuclear growth by controlling phospholipid biosynthesis; required for normal nuclear envelope morphology and sporulation; phosphatase activity of the Nem1p-Spo7p complex is inhibited by Ice2p; homolog of the human protein Dullard","termid":"PBO:0113292"}


id: SO:1000084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant decreases the stability (half-life) of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000084 sequence_variant_decreasing_transcript_stability (obsolete SO:1000084)","synonyms":[{"name":"mutation decreasing transcript stability","type":"related"},{"name":"sequence variant decreasing transcript stability","type":"exact"}],"termid":"SO:1000084"}


id: MONDO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cervicothoracic spina bifida aperta","secondary_identifiers":["MEDGEN:1770642","UMLS:C5439433","GARD:20956","icd11.foundation:572666703","Orphanet:268397"],"termid":"MONDO:0017067","xrefs":{"Monarch":{"xref_id":"0017067"}}}


id: PBO:0017433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-symbiotically_interacts_with","termid":"PBO:0017433"}


id: PR:O42851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23A1.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized trans-sulfuration enzyme C23A1.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.14c","synonyms":[{"name":"Spom972h-SPAC23A1.14c","type":"exact"}],"termid":"PR:O42851"}


id: PBO:0047064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 124 member A","termid":"PBO:0047064"}


id: FYPO:0001591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of histidine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal histidine import","termid":"FYPO:0001655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased histidine import","synonyms":[{"name":"decreased L-histidine import","type":"exact"},{"name":"decreased L-histidine import across plasma membrane","type":"exact"},{"name":"decreased histidine import during mitotic cell cycle","type":"related"},{"name":"decreased histidine import during vegetative growth","type":"exact"},{"name":"decreased histidine import into cell","type":"exact"},{"name":"decreased histidine uptake","type":"exact"},{"name":"reduced histidine import","type":"exact"}],"termid":"FYPO:0001591"}


id: PBO:0109601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CR1 antisense RNA 1","termid":"PBO:0109601"}


id: GO:1900543
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75754,72758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of purine nucleotide metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide metabolic process","termid":"GO:0045980"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of purine metabolic process","type":"narrow"},{"name":"down regulation of purine metabolism","type":"narrow"},{"name":"down regulation of purine nucleotide metabolic process","type":"exact"},{"name":"down regulation of purine nucleotide metabolism","type":"exact"},{"name":"down-regulation of purine metabolic process","type":"narrow"},{"name":"down-regulation of purine metabolism","type":"narrow"},{"name":"down-regulation of purine nucleotide metabolic process","type":"exact"},{"name":"down-regulation of purine nucleotide metabolism","type":"exact"},{"name":"downregulation of purine metabolic process","type":"narrow"},{"name":"downregulation of purine metabolism","type":"narrow"},{"name":"downregulation of purine nucleotide metabolic process","type":"exact"},{"name":"downregulation of purine nucleotide metabolism","type":"exact"},{"name":"inhibition of purine metabolic process","type":"narrow"},{"name":"inhibition of purine metabolism","type":"narrow"},{"name":"inhibition of purine nucleotide metabolic process","type":"narrow"},{"name":"inhibition of purine nucleotide metabolism","type":"narrow"},{"name":"negative regulation of purine metabolic process","type":"narrow"},{"name":"negative regulation of purine metabolism","type":"narrow"},{"name":"negative regulation of purine nucleotide metabolism","type":"exact"}],"termid":"GO:1900543","terms_by_termid":{"GO:0045820":null}}


id: GO:1901510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-microperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-microperfuranone metabolic process","synonyms":[{"name":"(-)-microperfuranone metabolism","type":"exact"}],"termid":"GO:1901510"}


id: PBO:0085090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome-associated nucleic acid binding protein; involved in RNA processing, surveillance, degradation, tethering, and export; forms a stable heterodimer with Rrp6p and regulates its exonucleolytic activity; rapidly degraded by the proteasome in the absence of Rrp6p; homolog of mammalian nuclear matrix protein C1D involved in regulation of DNA repair and recombination","termid":"PBO:0085090"}


id: GO:0005689
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any spliceosomal complex that forms during the splicing of a messenger RNA primary transcript to excise an intron; the series of U12-type spliceosomal complexes is involved in the splicing of the majority of introns that contain atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site.","definition_xrefs":["PMID:11971955","GOC:krc","PMID:11574683","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U12-type spliceosomal complex","secondary_identifiers":["Wikipedia:Minor_spliceosome"],"synonyms":[{"name":"AT-AC spliceosomal complex","type":"narrow"},{"name":"minor (U12-type) spliceosomal complex","type":"exact"},{"name":"minor spliceosomal complex","type":"exact"}],"termid":"GO:0005689"}


id: PBO:0039256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 5 family member A1","termid":"PBO:0039256"}


id: MONDO:0054752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synostoses syndrome","termid":"MONDO:0017923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple synostoses syndrome 4","secondary_identifiers":["DOID:0081320","UMLS:C4693531","MEDGEN:1638842","OMIM:617898"],"synonyms":[{"name":"SYNS4","type":"related"},{"name":"multiple synostoses syndrome 4","type":"exact"}],"termid":"MONDO:0054752","xrefs":{"Monarch":{"xref_id":"0054752"}}}


id: MONDO:0030046
data:
  {"annotated_genes":["SJAG_02584"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85167],"is_not":false,"summary":null,"term":"MONDO:0030046"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02584":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder and structural brain anomalies with or without seizures and spasticity","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1711516","OMIM:618890","UMLS:C5394423"],"synonyms":[{"name":"NEDBASS","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER AND STRUCTURAL BRAIN ANOMALIES WITH OR WITHOUT SEIZURES AND SPASTICITY","type":"exact"},{"name":"neurodevelopmental disorder and structural brain anomalies with or without seizures and spasticity","type":"exact"}],"termid":"MONDO:0030046","terms_by_termid":{"MONDO:0030046":null},"xrefs":{"Monarch":{"xref_id":"0030046"}}}


id: PBO:0071590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 7","termid":"PBO:0071590"}


id: PBO:0064625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase 1","termid":"PBO:0064625"}


id: GO:0072093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle formation","termid":"GO:0072033"},{"relation_name":"part_of","term_name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle formation","synonyms":[{"name":"metanephros formation","type":"exact"}],"termid":"GO:0072093"}


id: GO:0035540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SNARE complex disassembly","termid":"GO:0035495"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of SNARE complex disassembly","termid":"GO:0035540"}


id: GO:0071281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron ion","termid":"GO:0010039"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to iron ion","synonyms":[{"name":"cellular response to iron","type":"exact"}],"termid":"GO:0071281"}


id: PBO:0063749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 14","termid":"PBO:0063749"}


id: PBO:0004720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha","termid":"PBO:0004720"}


id: GO:0032680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["GOC:mah","PMID:15560120","PMID:10891884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of tumor necrosis factor production","secondary_identifiers":["GO:0042534","GO:1904467"],"synonyms":[{"name":"regulation of TNF production","type":"exact"},{"name":"regulation of TNF-alpha production","type":"exact"},{"name":"regulation of cachectin production","type":"exact"},{"name":"regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"regulation of tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032680"}


id: FYPO:0006161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to chromatin during meiosis I","synonyms":[{"name":"abolished protein localisation to chromatin during meiosis I","type":"exact"},{"name":"abolished protein localization to chromatin during first meiotic nuclear division","type":"exact"},{"name":"protein localization to chromatin during meiosis I replication abolished","type":"exact"}],"termid":"FYPO:0006161"}


id: MONDO:0011695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uveal melanoma","termid":"MONDO:0006486"},{"relation_name":"is_a","term_name":"susceptibility to uveal melanoma","termid":"MONDO:0007966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, uveal, susceptibility to, 1","secondary_identifiers":["MEDGEN:376198","UMLS:C1847724","OMIM:606660"],"synonyms":[{"name":"UVM1","type":"exact"},{"name":"melanoma, uveal, susceptibility to, 1","type":"exact"},{"name":"melanoma, uveal, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011695","xrefs":{"Monarch":{"xref_id":"0011695"}}}


id: PBO:0081627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 557","termid":"PBO:0081627"}


id: PBO:0036311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3b (predicted)","termid":"PBO:0036311"}


id: PBO:0045975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 1","termid":"PBO:0045975"}


id: GO:0030062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the heteromeric enzymes, located in the mitochondrion, that act in the tricarboxylic acid (TCA) cycle.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tricarboxylic acid cycle enzyme complex (obsolete GO:0030062)","synonyms":[{"name":"TCA cycle enzyme complex","type":"broad"}],"termid":"GO:0030062"}


id: GO:0097158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pyrimidine-rich (CU-rich) intronic sequence of a pre-messenger RNA (pre-mRNA).","definition_xrefs":["PMID:16777844","PMID:16260624","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-mRNA intronic binding","termid":"GO:0097157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"pre-mRNA intronic pyrimidine-rich binding","synonyms":[{"name":"pre-messenger RNA intronic pyrimidine-rich binding","type":"exact"}],"termid":"GO:0097158"}


id: PBO:0051682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit beta E","termid":"PBO:0051682"}


id: MONDO:0017170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic recurrent stupor is a rare neurologic disease characterized by unpredictable, transient and spontaneous unresponsiveness lasting from hours to days, with a frequency of three to seven attacks per year, in the absence of readily discernible toxic, metabolic or structural causes.","definition_xrefs":["Orphanet:276174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic recurrent stupor","secondary_identifiers":["UMLS:C4706562","SCTID:763739002","GARD:21045","icd11.foundation:1473114049","MEDGEN:1645620"],"termid":"MONDO:0017170","xrefs":{"Monarch":{"xref_id":"0017170"}}}


id: PBO:0028594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_activation_of_bipolar_cell_growth","termid":"PBO:0028594"}


id: MONDO:0021139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital or acquired","termid":"MONDO:0021139","xrefs":{"Monarch":{"xref_id":"0021139"}}}


id: GO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"myofibril","secondary_identifiers":["Wikipedia:Myofibril"],"termid":"GO:0030016"}


id: PBO:0090934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-A, phosphatidylinositol N-acetylglucosaminyltransferase subunit Gpi3","termid":"PBO:0090934"}


id: MONDO:0006365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartomatous polyp that occurs in the stomach, small and large intestines, and rarely within the esophagus, nasopharynx and the urinary tract. The Peutz-Jeghers polyps are grossly lobulated and dark. Microscopically, they have a central core of smooth muscle covered by mucosa. The smooth muscle shows tree-like branching. The question of whether or not the Peutz-Jeghers polyp is precancerous is a matter of controversy. The loss of heterozygosity on chromosome 19p (where the responsible gene LKB1 is located) suggests that the increased risk of malignancy may be due to malignant transformation from hamartoma to adenocarcinoma. --2002","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal hamartoma","termid":"MONDO:0006231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Peutz-Jeghers polyp","secondary_identifiers":["NCIT:C4733","EFO:1000470","UMLS:C0456487","MEDGEN:141582"],"synonyms":[{"name":"Peutz Jeghers polyp","type":"exact"},{"name":"Peutz-Jeghers polyp","type":"exact"}],"termid":"MONDO:0006365","xrefs":{"Monarch":{"xref_id":"0006365"}}}


id: PBO:0067538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 683, pseudogene","termid":"PBO:0067538"}


id: PBO:0080544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 3","termid":"PBO:0080544"}


id: PBO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A (predicted)","termid":"PBO:0005692"}


id: GO:0003367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one ameboid cell to another that contributes to the establishment of cell polarity that is part of the directed movement of one of the cells.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007163","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in ameboidal cell migration","termid":"GO:0003367"}


id: PR:Q9USI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USI0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C794.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.15","synonyms":[{"name":"Spom972h-SPCC794.15","type":"exact"}],"termid":"PR:Q9USI0"}


id: PBO:0090818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60","termid":"PBO:0090818"}


id: GO:0000425
data:
  {"annotated_genes":["SJAG_04963","SJAG_03851","SJAG_05017","SJAG_04502","SJAG_00114","SJAG_04552","SJAG_01783","SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71156,71503,71863,72742,73162,76968,79456,79551],"is_not":false,"summary":null,"term":"GO:0000425"}]},"cv_name":"biological_process","definition":"The selective autophagy process in which a peroxisome is degraded by macroautophagy.","definition_xrefs":["PMID:12914914","PMID:16973210","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"},{"relation_name":"is_a","term_name":"autophagy of peroxisome","termid":"GO:0030242"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00115":null,"SJAG_01783":null,"SJAG_03851":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04963":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"pexophagy","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9664873"],"synonyms":[{"name":"macropexophagy","type":"exact"}],"termid":"GO:0000425","terms_by_termid":{"GO:0000425":null}}


id: MONDO:0009310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chronic granulomatous disease in which the cause of the disease is a mutation in the NCF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 2","secondary_identifiers":["DOID:0070191","MESH:C565531","NANDO:2201282","MEDGEN:383869","OMIM:233710","GARD:15177","UMLS:C1856245"],"synonyms":[{"name":"CDG2","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-positive, type 2","type":"related"},{"name":"NCF2 chronic granulomatous disease","type":"exact"},{"name":"Ncf2, deficiency of","type":"related"},{"name":"P67-PHOX, deficiency of","type":"related"},{"name":"chronic granulomatous disease 2, autosomal recessive","type":"exact"},{"name":"chronic granulomatous disease caused by mutation in NCF2","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-POSITIVE, type II","type":"related"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 2","type":"exact"},{"name":"granulomatous disease, chronic, due to Ncf2 deficiency","type":"related"},{"name":"neutrophil cytosol Factor 2, deficiency of","type":"related"}],"termid":"MONDO:0009310","xrefs":{"Monarch":{"xref_id":"0009310"}}}


id: PBO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein kinase activator Atg17","termid":"PBO:0000851"}


id: MONDO:0011689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"dyslexia","termid":"MONDO:0005489"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 6","secondary_identifiers":["OMIM:606616","UMLS:C1847757","MEDGEN:335762"],"synonyms":[{"name":"DYX6","type":"exact"},{"name":"dyslexia, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0011689","xrefs":{"Monarch":{"xref_id":"0011689"}}}


id: GO:0098762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the meiotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic cell cycle phase","termid":"GO:0098762"}


id: GO:0045313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a rhabdomere membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"rhabdomere development","termid":"GO:0042052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"rhabdomere membrane biogenesis","termid":"GO:0045313"}


id: PBO:0054702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2111","termid":"PBO:0054702"}


id: MONDO:0014942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GABRB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005027","MONDO:0700092","MONDO:0004736"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 45","secondary_identifiers":["GARD:16203","MEDGEN:934658","OMIM:617153","UMLS:C4310691","DOID:0080428"],"synonyms":[{"name":"DEE45","type":"exact"},{"name":"EIEE45","type":"exact"},{"name":"GABRB1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 45","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GABRB1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 45","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 45; EIEE45","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 45","type":"exact"}],"termid":"MONDO:0014942","xrefs":{"Monarch":{"xref_id":"0014942"}}}


id: PBO:0039804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1 pseudogene 2","termid":"PBO:0039804"}


id: GO:0032670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-26 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-26 production","termid":"GO:0032630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-26 production","secondary_identifiers":["GO:0045530"],"synonyms":[{"name":"regulation of IL-26 production","type":"exact"},{"name":"regulation of interleukin-26 biosynthetic process","type":"narrow"}],"termid":"GO:0032670"}


id: PBO:0071272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 6","termid":"PBO:0071272"}


id: PBO:0085805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; dgr1 null mutant is resistant to 2-deoxy-D-glucose","termid":"PBO:0085805"}


id: MONDO:0008132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber plus disease","termid":"MONDO:0020478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"optic atrophy with demyelinating disease of CNS","secondary_identifiers":["DOID:0111756","GARD:15098","MESH:C563496","UMLS:C1833830","MEDGEN:322290","OMIM:165200"],"synonyms":[{"name":"optic atrophy with demyelinating disease of CNS","type":"exact"}],"termid":"MONDO:0008132","xrefs":{"Monarch":{"xref_id":"0008132"}}}


id: GO:0048446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the petal are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"petal development","termid":"GO:0048441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal morphogenesis","secondary_identifiers":["GO:0048418"],"termid":"GO:0048446"}


id: PBO:0062349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 2 pseudogene","termid":"PBO:0062349"}


id: PBO:0062556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 3","termid":"PBO:0062556"}


id: MONDO:1010441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiomyopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, dog","secondary_identifiers":["OMIA:000160-9615"],"termid":"MONDO:1010441","xrefs":{"Monarch":{"xref_id":"1010441"}}}


id: PBO:0077624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB15B antisense RNA 1","termid":"PBO:0077624"}


id: PBO:0027647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_BE49385A","termid":"PBO:0027647"}


id: GO:0060220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"},{"relation_name":"part_of","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"}


id: MONDO:0005745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the order enoplida.","definition_xrefs":["MESH:D017189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Nematoda infectious disease","termid":"MONDO:0005871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enoplea infectious disease","synonyms":[{"name":"Enoplea caused disease or disorder","type":"exact"},{"name":"Enoplea disease or disorder","type":"exact"}],"termid":"MONDO:0005745","xrefs":{"Monarch":{"xref_id":"0005745"}}}


id: MONDO:1011839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myelopathy, non-human animal","secondary_identifiers":["OMIA:000263"],"termid":"MONDO:1011839","xrefs":{"Monarch":{"xref_id":"1011839"}}}


id: GO:0018429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of copper into a 4Cu-S copper-sulfur cluster via heptakis-L-histidino tetracopper mu4-sulfide hydroxide.","definition_xrefs":["RESID:AA0298"],"gene_count":0,"genotype_count":0,"name":"obsolete copper incorporation into copper-sulfur cluster via heptakis-L-histidino tetracopper mu4-sulfide hydroxide (obsolete GO:0018429)","synonyms":[{"name":"copper incorporation into copper-sulphur cluster via heptakis-L-histidino tetracopper mu4-sulphide hydroxide","type":"exact"}],"termid":"GO:0018429"}


id: PR:000050599
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-316 of the amino acid sequence represented by UniProtKB:P13681. Example: UniProtKB:P13681, Thr-316, PR:000026291.","definition_xrefs":["PMID:7957097","PomBase:VW","PRO:DAN","PMID:29899453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase sid2 (Schizosaccharomyces pombe)","termid":"PR:000050482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis2/UnPhos(T316)","pombase_gene_id":"SPBC776.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein phosphatase PP1-1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dis2/UnPhos:1","type":"exact"},{"name":"UniProtKB:P13681, Thr-316, PR:000026291","type":"narrow"},{"name":"dis2/UnPhos(T316)","type":"exact"}],"termid":"PR:000050599"}


id: PBO:0065563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 3","termid":"PBO:0065563"}


id: GO:0019026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A single stranded RNA genome with the opposite nucleotide polarity as mRNA.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete negative sense viral genome (obsolete GO:0019026)","termid":"GO:0019026"}


id: PBO:0087458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex, which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; involved in localizing Ypt7p to the vacuolar membrane; required for macroautophagy, the CVT pathway and mitophagy","termid":"PBO:0087458"}


id: PBO:0075773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 1","termid":"PBO:0075773"}


id: GO:0043569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of insulin-like growth factor receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of insulin-like growth factor receptor signaling pathway","termid":"GO:0043567"},{"relation_name":"negatively_regulates","term_name":"insulin-like growth factor receptor signaling pathway","termid":"GO:0048009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"down regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of insulin-like growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of IGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of IGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of insulin-like growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0043569"}


id: PR:O42948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C16H5.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.13","synonyms":[{"name":"Spom972h-SPBC16H5.13","type":"exact"}],"termid":"PR:O42948"}


id: GO:0033386
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99384,109284],"is_not":false,"summary":null,"term":"GO:0033386"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of geranylgeranyl diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"geranylgeranyl diphosphate metabolic process","termid":"GO:0033385"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"geranylgeranyl diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranylgeranyl diphosphate anabolism","type":"exact"},{"name":"geranylgeranyl diphosphate biosynthesis","type":"exact"},{"name":"geranylgeranyl diphosphate formation","type":"exact"},{"name":"geranylgeranyl diphosphate synthesis","type":"exact"}],"termid":"GO:0033386","terms_by_termid":{"GO:0033386":null}}


id: GO:1990424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein arginine = ADP + protein arginine phosphate.","definition_xrefs":["GOC:imk","PMID:22517742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0004672","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"protein arginine kinase activity","synonyms":[{"name":"protein-arginine kinase activity","type":"exact"}],"termid":"GO:1990424"}


id: PBO:0083479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL085W/EXO70 and YJL087C/TRL1","termid":"PBO:0083479"}


id: PBO:0059773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 47","termid":"PBO:0059773"}


id: PBO:0079564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2","termid":"PBO:0079564"}


id: PBO:0011128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid import transporter Avt5","termid":"PBO:0011128"}


id: MONDO:0011336
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85431],"is_not":false,"summary":null,"term":"MONDO:0011336"}]},"cv_name":"mondo","definition":"Any genetic hemophagocytic lymphohistiocytosis in which the cause of the disease is a mutation in the STX11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial hemophagocytic lymphohistiocytosis 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110924","MEDGEN:350245","NANDO:2200730","OMIM:603552","UMLS:C1863728","MESH:C537252","GARD:9929"],"synonyms":[{"name":"FHL4","type":"exact"},{"name":"HLH4","type":"exact"},{"name":"HPLH4","type":"exact"},{"name":"Hlh4","type":"related"},{"name":"Hplh4","type":"related"},{"name":"STX11 genetic hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"familial hemophagocytic lymphohistiocytosis 4","type":"exact"},{"name":"familial hemophagocytic lymphohistiocytosis type 4","type":"exact"},{"name":"genetic hemophagocytic lymphohistiocytosis caused by mutation in STX11","type":"exact"},{"name":"hemophagocytic lymphohistiocytosis, familial, 4","type":"related"},{"name":"hemophagocytic lymphohistiocytosis, familial, type 4","type":"exact"}],"termid":"MONDO:0011336","terms_by_termid":{"MONDO:0011336":null},"xrefs":{"Monarch":{"xref_id":"0011336"}}}


id: GO:0044821
data:
  {"annotated_genes":["SJAG_03680","SJAG_01777","SJAG_01263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113791],"is_not":false,"summary":null,"term":"GO:0044821"},{"annotations":[64213,89510],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"}]},"cv_name":"biological_process","definition":"The process in which a telomere is maintained in a specific location at the nuclear periphery, as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere tethering at nuclear periphery","termid":"GO:0034398"},{"relation_name":"is_a","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_01777":null,"SJAG_03680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0051179","GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"meiotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0044821","terms_by_termid":{"GO:0044821":null,"GO:0070197":null}}


id: MONDO:1011203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis with gingival hamartomas that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis with gingival hamartomas, non-human animal","termid":"MONDO:1010312"},{"relation_name":"is_a","term_name":"osteopetrosis, cattle","termid":"MONDO:1011181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis with gingival hamartomas, cattle","secondary_identifiers":["OMIA:001887-9913"],"termid":"MONDO:1011203","xrefs":{"Monarch":{"xref_id":"1011203"}}}


id: PBO:0077639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 3","termid":"PBO:0077639"}


id: MONDO:0010417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Najm type X-linked intellectual deficit is a rare cerebellar dysgenesis syndrome characterized by variable clinical manifestations ranging from mild intellectual deficit with or without congenital nystagmus, to severe cognitive impairment associated with cerebellar and pontine hypoplasia/atrophy and abnormalities of cortical development.","definition_xrefs":["Orphanet:163937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Najm type","secondary_identifiers":["UMLS:C2677903","OMIM:300749","DOID:0060807","MESH:C567466","MEDGEN:437070","GARD:12669"],"synonyms":[{"name":"MICPCH","type":"exact"},{"name":"Micpch syndrome","type":"related"},{"name":"X-linked intellectual disability - microcephaly - pontocerebellar hypoplasia","type":"related"},{"name":"X-linked intellectual disability, Najm type","type":"related"},{"name":"X-linked intellectual disability-microcephaly-pontocerebellar hypoplasia syndrome","type":"exact"},{"name":"intellectual developmental disorder and microcephaly with pontine and cerebellar hypoplasia, X-linked dominant","type":"exact"},{"name":"intellectual disability and microcephaly with PONTINE and cerebellar hypoplasia","type":"related"},{"name":"intellectual disability and microcephaly with pontine and cerebellar hypoplasia","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Najm type","type":"related"},{"name":"mental retardation and microcephaly with PONTINE and cerebellar hypoplasia","type":"related"},{"name":"mental retardation and microcephaly with pontine and cerebellar hypoplasia","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Najm type","type":"related"},{"name":"microcephaly with pontine and cerebellar hypoplasia","type":"related"},{"name":"syndromic X-linked intellectual disability Najm type","type":"exact"}],"termid":"MONDO:0010417","xrefs":{"Monarch":{"xref_id":"0010417"}}}


id: GO:0015475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of adhesin from the periplasm to the external milieu; the adhesin and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete adhesin autotransporter activity (obsolete GO:0015475)","termid":"GO:0015475"}


id: GO:0009763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is NAD-malic enzyme.","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"NAD-malic enzyme C4 photosynthesis","termid":"GO:0009763"}


id: GO:0008449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate.","definition_xrefs":["EC:3.1.6.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"N-acetylglucosamine-6-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.14-RXN","Reactome:R-HSA-1638032","Reactome:R-HSA-2263495"],"synonyms":[{"name":"2-acetamido-2-deoxy-D-glucose 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetyl-D-glucosamine-6-sulfate 6-sulfohydrolase activity","type":"related"},{"name":"N-acetylglucosamine 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetylglucosamine-6-sulphatase activity","type":"exact"},{"name":"O,N-disulfate O-sulfohydrolase activity","type":"related"},{"name":"acetylglucosamine 6-sulfatase activity","type":"related"},{"name":"chondroitinsulfatase","type":"broad"},{"name":"glucosamine-6-sulfatase activity","type":"related"}],"termid":"GO:0008449"}


id: PBO:0055353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2782","termid":"PBO:0055353"}


id: PBO:0069256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 511, pseudogene","termid":"PBO:0069256"}


id: PBO:0056705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal embryonic leucine zipper kinase","termid":"PBO:0056705"}


id: GO:0009949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the establishment of polarity along the anterior/posterior axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"anterior/posterior axis specification","termid":"GO:0009948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of anterior/posterior axis","termid":"GO:0009949"}


id: GO:0047646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CHO + reduced FMN + O2 = R-COOH + FMN + H2O + light.","definition_xrefs":["EC:1.14.14.3","MetaCyc:ALKANAL-MONOOXYGENASE-FMN-LINKED-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkanal monooxygenase (FMN-linked) activity","secondary_identifiers":["RHEA:17181"],"synonyms":[{"name":"aldehyde monooxygenase activity","type":"broad"},{"name":"alkanal,reduced-FMN:oxygen oxidoreductase (1-hydroxylating, luminescing)","type":"related"},{"name":"bacterial luciferase activity","type":"related"},{"name":"vibrio fischeri luciferase activity","type":"related"}],"termid":"GO:0047646"}


id: PBO:0065730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 2B","termid":"PBO:0065730"}


id: PBO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 3","termid":"PBO:0071639"}


id: PATO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000865 startle reflex value (obsolete PATO:0000865)","termid":"PATO:0000865"}


id: PBO:0004295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type V","termid":"PBO:0004295"}


id: GO:1902227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:16705167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"negatively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"down regulation of M-CSF signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"down-regulation of M-CSF signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"downregulation of M-CSF signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"inhibition of M-CSF signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"negative regulation of M-CSF signaling pathway","type":"exact"},{"name":"negative regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902227"}


id: PBO:0044292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC finger protein 1","termid":"PBO:0044292"}


id: PBO:0087386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol transporter that transfers sterols between membranes; may regulate and coordinate formation of contact sites between organelles; localizes to ER-mitochondrial contact sites in a Tom70p- and Tom71p-dependent manner; mitochondrial localization requires GRAM domain; also localizes to ER-vacuole contact sites, in a Vac8p-dependent manner; has GRAM and StART-like (VASt) domains; one of six StART-like domain-containing proteins in yeast; conserved across eukaryotes","termid":"PBO:0087386"}


id: GO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein (obsolete GO:0005322)","synonyms":[{"name":"LDL","type":"exact"},{"name":"low-density lipoprotein","type":"exact"}],"termid":"GO:0005322"}


id: PBO:0091891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase/ubiquitin protein ligase E3, human ERCC4 ortholog Rhp16/Rad16","termid":"PBO:0091891"}


id: MONDO:0018476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia-aphonia syndrome","secondary_identifiers":["GARD:21739","UMLS:C5190573","MEDGEN:1675660","Orphanet:412217"],"termid":"MONDO:0018476","xrefs":{"Monarch":{"xref_id":"0018476"}}}


id: GO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + L-cysteine = nicotinamide + N2-(ADP-D-ribosyl)-L-cysteine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)-cysteine ADP-ribosyltransferase activity (obsolete GO:0018071)","termid":"GO:0018071"}


id: GO:0007528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction.","definition_xrefs":["GOC:mtg_OBO2OWL_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular junction development","synonyms":[{"name":"NMJ stability","type":"related"},{"name":"neuromuscular junction organization","type":"exact"},{"name":"neuromuscular junction stability","type":"related"}],"termid":"GO:0007528"}


id: MONDO:0007549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized dominant dystrophic epidermolysis bullosa (DDEB-gen) is a subtype of dystrophic epidermolysis bullosa (DEB), formerly known as DDEB, Pasini and Cockayne-Touraine types, characterized by generalized blistering, milia formation, atrophic scarring, and dystrophic nails.","definition_xrefs":["Orphanet:231568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"generalized dominant dystrophic epidermolysis bullosa","secondary_identifiers":["MEDGEN:140935","ICD9:757.39","OMIM:131750","GARD:2139","UMLS:C0432322","DOID:0080224","SCTID:75875004"],"synonyms":[{"name":"Albopapuloid dominant dystrophic epidermolysis bullosa","type":"related"},{"name":"DDEB","type":"related"},{"name":"DDEB, Pasini and Cockayne-Touraine types","type":"exact"},{"name":"DDEB, generalised","type":"exact"},{"name":"DDEB, generalized","type":"exact"},{"name":"DDEB-gen","type":"exact"},{"name":"autosomal dominant dystrophic epidermolysis bullosa","type":"related"},{"name":"autosomal dominant dystrophic epidermolysis bullosa, Pasini and Cockayne-Touraine types","type":"exact"},{"name":"dominant dystrophic epidermolysis bullosa","type":"related"},{"name":"dominant dystrophic epidermolysis bullosa, generalised","type":"related"},{"name":"dominant dystrophic epidermolysis bullosa, generalized","type":"related"},{"name":"dystrophic epidermolysis bullosa, autosomal dominant","type":"related"},{"name":"epidermolysis bullosa dystrophica with subcorneal cleavage","type":"related"},{"name":"epidermolysis bullosa dystrophica, AD","type":"exact"},{"name":"epidermolysis bullosa dystrophica, Cockayne-Touraine type","type":"related"},{"name":"epidermolysis bullosa dystrophica, Cockayne-Touraine type (formerly)","type":"related"},{"name":"epidermolysis bullosa dystrophica, Pasini type","type":"related"},{"name":"epidermolysis bullosa dystrophica, Pasini type (formerly)","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal dominant","type":"related"}],"termid":"MONDO:0007549","xrefs":{"Monarch":{"xref_id":"0007549"}}}


id: GO:0021565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the accessory nerve over time, from its formation to the mature structure. In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GO_REF:0000021","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve development","synonyms":[{"name":"CN XI development","type":"related"},{"name":"cranial nerve 11 development","type":"related"},{"name":"cranial nerve XI development","type":"exact"},{"name":"spinal accessory nerve development","type":"exact"}],"termid":"GO:0021565"}


id: GO:0042708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of elastin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete elastase activity (obsolete GO:0042708)","synonyms":[{"name":"elastase activity","type":"exact"}],"termid":"GO:0042708"}


id: MONDO:0100069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic genetic deafness characterized by segregation of nonsyndromic hearing loss in females and hearing loss with infertility in males. Affected males have been reported to have low count to absent sperm, immobile sperm, and/or sperm with abnormal morphology.","definition_xrefs":["PMID:29293958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing impairment and infertile male syndrome","synonyms":[{"name":"HIIMS","type":"exact"},{"name":"hearing impairment and infertile male syndrome","type":"exact"}],"termid":"MONDO:0100069","xrefs":{"Monarch":{"xref_id":"0100069"}}}


id: RO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"precedes","termid":"BFO:0000063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_precedes","termid":"RO:0002090"}


id: GO:0044108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, carried out at the level of an individual cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular alcohol biosynthetic process (obsolete GO:0044108)","termid":"GO:0044108"}


id: PBO:0056231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI1 antisense RNA 1","termid":"PBO:0056231"}


id: PBO:0089964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP 5'-nucleotidase Isn1","termid":"PBO:0089964"}


id: PBO:0067550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 700, pseudogene","termid":"PBO:0067550"}


id: PBO:0069909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1200, pseudogene","termid":"PBO:0069909"}


id: FYPO:0002928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of normal (i.e. indistinguishable from wild type) length.","definition_xrefs":["PMID:24081329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal poly(A) tail length","synonyms":[{"name":"normal polyA sequence length","type":"exact"},{"name":"normal polyA tail length","type":"exact"}],"termid":"FYPO:0002928"}


id: PBO:0080711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 11","termid":"PBO:0080711"}


id: MONDO:0019904
data:
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id: MONDO:0016503
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital erosive and vesicular dermatosis","secondary_identifiers":["GARD:20619","icd11.foundation:2106762282","MEDGEN:1669240","UMLS:C4751164","Orphanet:231573"],"synonyms":[{"name":"CEVD","type":"exact"},{"name":"congenital erosive and vesicular dermatosis with reticulated supple scarring","type":"exact"}],"termid":"MONDO:0016503","xrefs":{"Monarch":{"xref_id":"0016503"}}}


id: PBO:0059902
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 25","termid":"PBO:0059902"}


id: PBO:0057635
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id: GO:0071094
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id: MONDO:0045022
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id: PBO:0063070
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pannexin 3","termid":"PBO:0063070"}


id: PATO:0000885
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id: FYPO:0000986
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a higher-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000986)","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000986"}


id: GO:0090290
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte proliferation","termid":"GO:0070665"},{"relation_name":"is_a","term_name":"regulation of osteoclast proliferation","termid":"GO:0090289"},{"relation_name":"positively_regulates","term_name":"osteoclast proliferation","termid":"GO:0002158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast proliferation","termid":"GO:0090290"}


id: MONDO:0005997
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing or stricture of the tricuspid orifice of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve stenosis","secondary_identifiers":["HP:0010446","icd11.foundation:442626161","MEDGEN:21678","DOID:4078","MESH:D014264","NANDO:2200300","NCIT:C50783","EFO:0007525","UMLS:C0040963","SCTID:49915006"],"synonyms":[{"name":"tricuspid stenosis","type":"exact"}],"termid":"MONDO:0005997","xrefs":{"Monarch":{"xref_id":"0005997"}}}


id: MONDO:0100509
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy in which the cause of the disease is biallelic variants in the IFT140 gene.","definition_xrefs":["PMID:22503633","PMID:26359340","PMID:23418020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT140-related recessive ciliopathy","synonyms":[{"name":"IFT140-related recessive ciliopathy","type":"exact"},{"name":"retinitis pigmentosa 80","type":"narrow"},{"name":"short-rib thoracic dysplasia 9 with or without polydactyly","type":"narrow"}],"termid":"MONDO:0100509","xrefs":{"Monarch":{"xref_id":"0100509"}}}


id: PBO:0061011
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicolin 1, tubulin polyglutamylase complex subunit","termid":"PBO:0061011"}


id: SO:0000135
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id: GO:1902123
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id: FYPO:0006139
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-myristoylglycerophosphocholine measured in a cell is higher than normal.","definition_xrefs":["PMID:28667014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular 2-myristoylglycerophosphocholine level","synonyms":[{"name":"increased 2-myristoylglycerophosphocholine accumulation","type":"related"},{"name":"increased cellular 2-myristoylglycerophosphocholine level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-myristoylglycerophosphocholine level during vegetative growth","type":"exact"},{"name":"increased cellular 2-tetradecanoyl-sn-glycero-3-phosphocholine level","type":"exact"}],"termid":"FYPO:0006139"}


id: GO:0140916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a lysosome.","definition_xrefs":["PMID:25808614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"zinc ion import into lysosome","termid":"GO:0140916"}


id: PBO:0077218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 16 homolog pseudogene 1","termid":"PBO:0077218"}


id: GO:0046090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyadenosine metabolic process","synonyms":[{"name":"deoxyadenosine metabolism","type":"exact"}],"termid":"GO:0046090"}


id: GO:1902474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:TermGenie","PMID:22588719","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to synapse","termid":"GO:1902473"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to synapse","synonyms":[{"name":"activation of protein localisation to synapse","type":"narrow"},{"name":"activation of protein localization to synapse","type":"narrow"},{"name":"positive regulation of protein localisation to synapse","type":"exact"},{"name":"up regulation of protein localisation to synapse","type":"exact"},{"name":"up regulation of protein localization to synapse","type":"exact"},{"name":"up-regulation of protein localisation to synapse","type":"exact"},{"name":"up-regulation of protein localization to synapse","type":"exact"},{"name":"upregulation of protein localisation to synapse","type":"exact"},{"name":"upregulation of protein localization to synapse","type":"exact"}],"termid":"GO:1902474"}


id: GO:0046981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of N-acetylglucosamine (GlcNAc) in a beta-1,3 linkage to the mannose(beta-1,4)Glc disaccharide core of glycolipids.","definition_xrefs":["GOC:bf","PMID:12130631","PMID:12130651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity","synonyms":[{"name":"UDP-N-acetylglucosamine:beta-D-mannosyl-glycolipid beta-1,3-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0046981"}


id: MONDO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A capillary hemangioma arising from the eyelid.","definition_xrefs":["NCIT:C4357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary hemangioma","termid":"MONDO:0002407"},{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"eyelid capillary hemangioma","secondary_identifiers":["MEDGEN:87379","SCTID:231828003","UMLS:C0339110"],"synonyms":[{"name":"capillary angioma of eyelid","type":"exact"},{"name":"capillary angioma of lid","type":"exact"},{"name":"capillary angioma of the eyelid","type":"exact"},{"name":"capillary angioma of the lid","type":"exact"},{"name":"capillary hemangioma of eyelid","type":"exact"},{"name":"capillary hemangioma of lid","type":"exact"},{"name":"capillary hemangioma of the eyelid","type":"exact"},{"name":"capillary hemangioma of the lid","type":"exact"},{"name":"eyelid capillary angioma","type":"exact"},{"name":"eyelid capillary hemangioma","type":"exact"}],"termid":"MONDO:0021627","xrefs":{"Monarch":{"xref_id":"0021627"}}}


id: GO:1903960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transmembrane transport.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic anion transport","termid":"GO:1903792"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anion transmembrane transport","synonyms":[{"name":"down regulation of anion transmembrane transport","type":"exact"},{"name":"down-regulation of anion transmembrane transport","type":"exact"},{"name":"downregulation of anion transmembrane transport","type":"exact"},{"name":"inhibition of anion transmembrane transport","type":"narrow"}],"termid":"GO:1903960"}


id: GO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannan, a group of polysaccharides containing a backbone composed of a polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mannan metabolic process","synonyms":[{"name":"mannan metabolism","type":"exact"}],"termid":"GO:0010412"}


id: GO:0043930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle) as part of the primary follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"primary follicle stage","termid":"GO:0048160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in primary follicle stage","synonyms":[{"name":"primary ovarian follicle growth during primary follicle stage","type":"related"}],"termid":"GO:0043930"}


id: MONDO:0011055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 10p is a rare chromosomal disorder in which the tip of the short arm (p arm) of chromosome 10 is deleted resulting in a variable phenotype depending on the size of the deletion. The deletion may involve only the terminal 10p15 band, or extend towards the centromere to bands 10p14 or 10p13.","definition_xrefs":["Orphanet:1580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 10","termid":"MONDO:0016892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 10p","secondary_identifiers":["UMLS:C1832431","GARD:1323","OMIM:601362","MEDGEN:321954","SCTID:719686003","NCIT:C130982","MESH:C563337"],"synonyms":[{"name":"10p deletion","type":"related"},{"name":"10p monosomy","type":"related"},{"name":"10p13-p14 Deletion syndrome","type":"exact"},{"name":"Dgs2","type":"related"},{"name":"DiGeorge syndrome type 2","type":"exact"},{"name":"DiGeorge syndrome/velocardiofacial syndrome Complex type 2","type":"exact"},{"name":"DiGeorge syndrome/velocardiofacial syndrome complex 2","type":"related"},{"name":"DiGeorge syndrome/velocardiofacial syndrome complex-2","type":"exact"},{"name":"chromosome 10p deletion","type":"related"},{"name":"deletion 10p","type":"related"},{"name":"distal 10p deletion","type":"exact"},{"name":"distal monosomy type 10p","type":"exact"},{"name":"monosomy 10p","type":"related"},{"name":"monosomy 10pter","type":"exact"},{"name":"partial monosomy 10p","type":"related"},{"name":"telomeric deletion 10p","type":"exact"}],"termid":"MONDO:0011055","xrefs":{"Monarch":{"xref_id":"0011055"}}}


id: PBO:0060913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1","termid":"PBO:0060913"}


id: GO:0004359
data:
  {"annotated_genes":["SJAG_02618","SJAG_00392","SJAG_03775","SJAG_00691","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63978,77218,78093,93183,110878],"is_not":false,"summary":null,"term":"GO:0004359"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH4+.","definition_xrefs":["RHEA:15889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00691":null,"SJAG_00964":null,"SJAG_02618":null,"SJAG_03775":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"glutaminase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70609","EC:3.5.1.2"],"synonyms":[{"name":"L-glutaminase activity","type":"related"},{"name":"L-glutamine amidohydrolase activity","type":"related"},{"name":"glutaminase I","type":"related"},{"name":"glutamine aminohydrolase activity","type":"related"}],"termid":"GO:0004359","terms_by_termid":{"GO:0004359":null}}


id: MONDO:0008062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by sudden and transient episodes of loss of muscle tone. It often follows an experience of intense emotions. It is seen in patients with narcolepsy.","definition_xrefs":["NCIT:C84618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy-cataplexy syndrome","termid":"MONDO:0016158"},{"relation_name":"is_a","term_name":"hereditary narcolepsy","termid":"MONDO:0100554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy 1","secondary_identifiers":["UMLS:C1834372","MESH:C563534","SCTID:46263000","GARD:15091","MEDGEN:371809","OMIM:161400"],"synonyms":[{"name":"HCRT narcolepsy","type":"exact"},{"name":"NRCLP1","type":"related"},{"name":"cataplexy","type":"related"},{"name":"narcolepsy 1","type":"exact"},{"name":"narcolepsy caused by mutation in HCRT","type":"exact"},{"name":"narcoleptic syndrome 1","type":"related"}],"termid":"MONDO:0008062","xrefs":{"Monarch":{"xref_id":"0008062"}}}


id: PBO:0070896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 4","termid":"PBO:0070896"}


id: PBO:0045748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBP cholestenol delta-isomerase","termid":"PBO:0045748"}


id: PBO:0082313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for the eIF2 translation initiation factor complex; regulates translational initiation; conserved residues of this ATP-Grasp protein that bind to ATP-Mg2+ in the pombe ortholog are required for complex assembly in budding yeast; interaction with eIF2 subunit Gcd11p facilitates complex assembly and activity; required for the START transition and timely progression through G2; regulated by nutrient availability; human ortholog complements the yeast mutant","termid":"PBO:0082313"}


id: GO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate, where the triacylglycerol is part of a lipoprotein. May also hydrolyze diacylglycerol and phospholipids present in lipoproteins.","definition_xrefs":["EC:3.1.1.34","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triacylglycerol lipase activity","termid":"GO:0004806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"lipoprotein lipase activity","secondary_identifiers":["Reactome:R-HSA-8979996","Reactome:R-HSA-2395768","Reactome:R-HSA-1482811","Reactome:R-HSA-6789310","Reactome:R-HSA-174757","Reactome:R-HSA-8980228"],"synonyms":[{"name":"clearing factor lipase activity","type":"related"},{"name":"diacylglycerol hydrolase activity","type":"related"},{"name":"diacylglycerol lipase activity","type":"related"},{"name":"diglyceride lipase activity","type":"related"},{"name":"lipemia-clearing factor","type":"related"},{"name":"postheparin esterase activity","type":"related"},{"name":"postheparin lipase activity","type":"related"},{"name":"triacylglycero-protein acylhydrolase activity","type":"related"}],"termid":"GO:0004465"}


id: GO:0140823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2B-serine (position 36) + ATP = histone H2B-phosphoserine (position 36) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 36 of histone H2B.","definition_xrefs":["PMID:32822587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2B kinase activity","termid":"GO:0140998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0140096","GO:0004672","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H2BS36 kinase activity","synonyms":[{"name":"histone H2B-S36 kinase activity","type":"exact"},{"name":"histone kinase activity (H2B-S36 specific)","type":"exact"}],"termid":"GO:0140823"}


id: MONDO:0019665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrous dysplasia of bone involving only one bone.","definition_xrefs":["MESH:D005358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrous dysplasia","termid":"MONDO:0000845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monostotic fibrous dysplasia","secondary_identifiers":["ICD9:733.29","icd11.foundation:1033883899","NCIT:C53971","GARD:19181","SCTID:89859004","MEDGEN:42020","Orphanet:93277","ICD10CM:Q78.1","UMLS:C0016064","HP:0010736"],"synonyms":[{"name":"Jaffe-Lichtenstein disease","type":"exact"},{"name":"monostotic fibrous dysplasia","type":"exact"},{"name":"monostotic fibrous dysplasia (disease)","type":"exact"},{"name":"monostotic fibrous dysplasia of bone","type":"exact"}],"termid":"MONDO:0019665","xrefs":{"Monarch":{"xref_id":"0019665"}}}


id: MONDO:0012181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary spastic paraplegia that has material basis in variation in the chromosome region 10q22.1-q24.1.","definition_xrefs":["DOID:0110778","PMID:15455396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 27","secondary_identifiers":["Orphanet:101007","UMLS:C1836899","MEDGEN:373203","GARD:16940","MESH:C563807","OMIM:609041"],"synonyms":[{"name":"SPG27","type":"exact"},{"name":"autosomal recessive spastic paraplegia 27","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 27","type":"exact"},{"name":"hereditary spastic paraplegia type 27","type":"exact"},{"name":"spastic paraplegia 27, autosomal recessive","type":"related"}],"termid":"MONDO:0012181","xrefs":{"Monarch":{"xref_id":"0012181"}}}


id: PBO:0079851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog A","termid":"PBO:0079851"}


id: FYPO:0004698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of heme binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased heme binding","synonyms":[{"name":"decreased haem binding","type":"exact"},{"name":"reduced heme binding","type":"exact"}],"termid":"FYPO:0004698"}


id: GO:0044860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane raft","termid":"GO:1903044"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to plasma membrane raft","termid":"GO:0044860"}


id: PBO:0003537
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. pombe ura5 mutant","termid":"PBO:0003537"}


id: GO:1901527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any abscisic acid mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["PMID:22730405","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"},{"relation_name":"part_of","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"abscisic acid-activated signaling pathway involved in stomatal movement","synonyms":[{"name":"abscisic acid mediated signaling pathway involved in stomatal movement","type":"related"},{"name":"abscisic acid mediated signalling involved in stomatal movement","type":"exact"}],"termid":"GO:1901527"}


id: PBO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.16","termid":"PBO:0004067"}


id: GO:0044761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of cholinergic synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse via the neurotransmitter choline, in its host organism.","definition_xrefs":["PMID:37157163","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host synaptic transmission","termid":"GO:0044759"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cholinergic synaptic transmission","termid":"GO:0044760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cholinergic synaptic transmission","synonyms":[{"name":"negative regulation by symbiont of host cholinergic synaptic transmission","type":"exact"}],"termid":"GO:0044761"}


id: MONDO:0015181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital intestinal disease due to an enzymatic defect (obsolete MONDO:0015181)","secondary_identifiers":["Orphanet:104006"],"termid":"MONDO:0015181","xrefs":{"Monarch":{"xref_id":"0015181"}}}


id: GO:0032045
data:
  {"annotated_genes":["SJAG_03089","SJAG_06588","SJAG_00143","SJAG_01367","SJAG_03928","SJAG_00688","SJAG_01032","SJAG_01659"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73597],"is_not":false,"summary":null,"term":"GO:0032045"},{"annotations":[90756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035658"},{"annotations":[92650,104928,107648,93812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071986"},{"annotations":[76962,75526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034066"}]},"cv_name":"cellular_component","definition":"A protein complex that stimulates the exchange of guanyl nucleotides associated with a GTPase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00688":null,"SJAG_01032":null,"SJAG_01367":null,"SJAG_01659":null,"SJAG_03089":null,"SJAG_03928":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"guanyl-nucleotide exchange factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"guanine nucleotide exchange factor","type":"related"}],"termid":"GO:0032045","terms_by_termid":{"GO:0032045":null,"GO:0034066":null,"GO:0035658":null,"GO:0071986":null}}


id: PBO:0038726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 21","termid":"PBO:0038726"}


id: GO:0102895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9(S)-HPODE = colneleate + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"colneleate synthase activity","secondary_identifiers":["MetaCyc:RXN-8496","RHEA:28174"],"termid":"GO:0102895"}


id: FYPO:0007846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle is shorter than normal during anaphase of meiosis I.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short meiotic spindle","termid":"FYPO:0000735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"short meiotic spindle during anaphase I","synonyms":[{"name":"short meiosis I spindle during anaphase","type":"exact"},{"name":"short spindle during anaphase of meiosis I","type":"exact"},{"name":"short spindle during meiotic anaphase I","type":"exact"}],"termid":"FYPO:0007846"}


id: GO:0010578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adenylate cyclase (AC) activity that is an integral part of a G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase activity involved in G protein-coupled receptor signaling pathway (obsolete GO:0010578)","synonyms":[{"name":"regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signalling","type":"exact"}],"termid":"GO:0010578"}


id: GO:2000108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"positively_regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte apoptotic process","synonyms":[{"name":"positive regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000108"}


id: SO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000309 computed_feature (obsolete SO:0000309)","termid":"SO:0000309"}


id: PBO:0059539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site Y","termid":"PBO:0059539"}


id: MONDO:0019706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal storage disease with skeletal involvement (obsolete MONDO:0019706)","termid":"MONDO:0019706","xrefs":{"Monarch":{"xref_id":"0019706"}}}


id: PBO:0017618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin-associated protein Pds5","termid":"PBO:0017618"}


id: PBO:0013457
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ForMaldehyde Dehydrogenase","termid":"PBO:0013457"}


id: GO:0070399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["PMID:14665680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wall teichoic acid metabolic process","termid":"GO:0070397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wall teichoic acid catabolic process","synonyms":[{"name":"wall teichoic acid breakdown","type":"exact"},{"name":"wall teichoic acid catabolism","type":"exact"},{"name":"wall teichoic acid degradation","type":"exact"}],"termid":"GO:0070399"}


id: PBO:0011966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal calcium sensor related protein Ncs1","termid":"PBO:0011966"}


id: GO:0071891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An N-terminal peptidyl-proline dimethylation process that contributes to translation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline dimethylation involved in translation (obsolete GO:0071891)","termid":"GO:0071891"}


id: GO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell trailing edge","synonyms":[{"name":"back of cell","type":"exact"},{"name":"trailing edge","type":"exact"}],"termid":"GO:0031254"}


id: PBO:0052666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 34","termid":"PBO:0052666"}


id: PR:U3H0A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1884.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:U3H0A9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPCC1884.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1884.01","synonyms":[{"name":"Spom972h-SPCC1884.01","type":"exact"}],"termid":"PR:U3H0A9"}


id: GO:0090024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte chemotaxis","termid":"GO:0071623"},{"relation_name":"is_a","term_name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil migration","termid":"GO:1902623"},{"relation_name":"negatively_regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil chemotaxis","termid":"GO:0090024"}


id: MONDO:1011779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal hepatitis, non-human animal","secondary_identifiers":["OMIA:001094"],"termid":"MONDO:1011779","xrefs":{"Monarch":{"xref_id":"1011779"}}}


id: _global:is_consecutive_sequence_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R is_consecutive_sequence_of R iff every instance of R is equivalent to a collection of instances of U:u1, u2, un, such that no pair of ux uy is overlapping and for all ux, it is adjacent to ux-1 and ux+1, with the exception of the initial and terminal u1,and un (which may be identical).","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_consecutive_sequence_of","termid":"_global:is_consecutive_sequence_of"}


id: PBO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy","termid":"PBO:0001063"}


id: GO:0036119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to platelet-derived growth factor","synonyms":[{"name":"response to PDGF stimulus","type":"exact"},{"name":"response to platelet-derived growth factor stimulus","type":"exact"}],"termid":"GO:0036119"}


id: GO:0052106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms living in intimate contact with a host organism monitors population density by detecting the concentration of small diffusible signal molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete quorum sensing involved in interaction with host (obsolete GO:0052106)","synonyms":[{"name":"quorum sensing during interaction with host","type":"related"}],"termid":"GO:0052106"}


id: PBO:0080616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 53","termid":"PBO:0080616"}


id: PR:O13973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp10 gene.","definition_xrefs":["UniProtKB:O13973","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.13c","synonyms":[{"name":"Spom972h-mrp10","type":"exact"}],"termid":"PR:O13973"}


id: MONDO:0020452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the inferior vena cava","termid":"MONDO:0019830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inferior vena cava interruption","secondary_identifiers":["ICD9:747.49","MEDGEN:1806633","Orphanet:99123","SCTID:93031005","UMLS:C5680291","GARD:19664"],"synonyms":[{"name":"IVC interruption","type":"exact"},{"name":"Inferior caval vein interruption","type":"exact"}],"termid":"MONDO:0020452","xrefs":{"Monarch":{"xref_id":"0020452"}}}


id: PBO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Muskelin homolog (predicted)","termid":"PBO:0002183"}


id: GO:1990627
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104701],"is_not":false,"summary":null,"term":"GO:1990627"}]},"cv_name":"biological_process","definition":"The membrane organization process that joins two mitochondrial inner membranes to form a single membrane.","definition_xrefs":["GOC:vw","PMID:17055438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"},{"relation_name":"part_of","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial inner membrane fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrion inner membrane fusion","type":"exact"}],"termid":"GO:1990627","terms_by_termid":{"GO:1990627":null}}


id: FYECO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mevalonate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mevalonate","termid":"FYECO:0000269"}


id: SO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The polypyrimidine tract is one of the cis-acting sequence elements directing intron removal in pre-mRNA splicing.","direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine_tract","secondary_identifiers":["http://en.wikipedia.org/wiki/Polypyrimidine_tract"],"synonyms":[{"name":"polypyrimidine tract","type":"exact"}],"termid":"SO:0000612"}


id: PBO:0078273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-1","termid":"PBO:0078273"}


id: PBO:0075584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 8 (putative)","termid":"PBO:0075584"}


id: PBO:0070805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 35","termid":"PBO:0070805"}


id: GO:0097437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in an organism remaining in dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of dormancy","termid":"GO:0097437"}


id: GO:0060687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of prostate gland branching, the process in which the branching structure of the prostate gland is generated and organized. A branch is a division or offshoot from a main stem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"branching involved in prostate gland morphogenesis","termid":"GO:0060442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in prostate gland morphogenesis","termid":"GO:0060687"}


id: PBO:0027388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0027388"}


id: PBO:0045043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 3","termid":"PBO:0045043"}


id: PBO:0054882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2296","termid":"PBO:0054882"}


id: PBO:0046273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emerin","termid":"PBO:0046273"}


id: PBO:0058807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7849","termid":"PBO:0058807"}


id: MONDO:1011194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrodysplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, dog","secondary_identifiers":["OMIA:001315-9615"],"termid":"MONDO:1011194","xrefs":{"Monarch":{"xref_id":"1011194"}}}


id: MOD:00153
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 3'-(8alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0144","Unimod:50#H","PubMed:8076","PubMed:241294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(8alpha-FAD)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-(8alpha-FAD)-L-histidine","type":"exact"},{"name":"8alpha-(N(delta)-histidyl)FAD","type":"exact"},{"name":"8alpha-(N3'-histidyl)FAD","type":"exact"},{"name":"8alpha-N1-histidyl FAD","type":"related"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES Pros-8alpha-FAD histidine","type":"exact"},{"name":"N(pi)-(8alpha-FAD)-histidine","type":"exact"},{"name":"Np8aFADHis","type":"exact"},{"name":"pros-(8alpha-FAD)-histidine","type":"exact"}],"termid":"MOD:00153"}


id: FYPO:0001177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing trehalose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0001985","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on trehalose carbon source","synonyms":[{"name":"decreased growth on trehalose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on trehalose carbon source","type":"exact"},{"name":"reduced cell growth on trehalose carbon source","type":"exact"},{"name":"slow cell growth on trehalose carbon source","type":"narrow"}],"termid":"FYPO:0001177"}


id: GO:0004206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-10 activity (obsolete GO:0004206)","synonyms":[{"name":"caspase-10 activity","type":"exact"}],"termid":"GO:0004206"}


id: GO:0072541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-dithiol + ONOO- = [protein]-disulfide + NO2- + H2O.","definition_xrefs":["GOC:rs","PMID:11001062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peroxynitrite reductase activity","synonyms":[{"name":"peroxynitritase activity","type":"exact"}],"termid":"GO:0072541"}


id: MONDO:0013924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the BMP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 13","secondary_identifiers":["MEDGEN:766801","OMIM:614856","DOID:0110342","UMLS:C3553887","GARD:15856"],"synonyms":[{"name":"BMP1 osteogenesis imperfecta","type":"exact"},{"name":"OI, type 13","type":"related"},{"name":"OI13","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in BMP1","type":"exact"},{"name":"osteogenesis imperfecta type XIII","type":"exact"},{"name":"osteogenesis imperfecta, type 13","type":"related"},{"name":"osteogenesis imperfecta, type XIII","type":"related"}],"termid":"MONDO:0013924","xrefs":{"Monarch":{"xref_id":"0013924"}}}


id: MONDO:0009856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessively inherited syndromic developmental defect of the eye characterized by a variable phenotype including Peters anomaly and other anterior chamber eye anomalies, short limbs, limb abnormalities (i.e. rhizomelia and brachydactyly), characteristic facial features (upper lip with cupid bow, short palpebral fissures), cleft lip/palate, and mild to severe developmental delay/intellectual disability. Other associated abnormalities reported in some patients include congenital heart defects (i.e. hypoplastic left heart, absence of right pulmonary vein, bicuspid pulmonary valve), genitourinary anomalies (hydronephrosis, renal hypoplasia, renal and ureteral duplication, multicystic dysplastic kidneys, glomerulocystic kidneys) and congenital hypothyroidism.","definition_xrefs":["Orphanet:709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of fucoglycosan synthesis","termid":"MONDO:0017747"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005328","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"Peters plus syndrome","secondary_identifiers":["ICD9:743.44","OMIM:261540","MESH:C537617","NCIT:C123436","DOID:0070312","UMLS:C0796012","SCTID:449817000","GARD:8422","MEDGEN:163204","DOID:0080201"],"synonyms":[{"name":"Krause-Kivlin syndrome","type":"exact"},{"name":"Krause-van Schooneveld-Kivlin syndrome","type":"exact"},{"name":"Peters anomaly with short limb dwarfism","type":"exact"},{"name":"Peters anomaly with short-limb dwarfism","type":"related"},{"name":"Peters anomaly-short limb dwarfism syndrome","type":"exact"},{"name":"Peters-plus syndrome","type":"exact"}],"termid":"MONDO:0009856","xrefs":{"Monarch":{"xref_id":"0009856"}}}


id: MONDO:0020266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genodermatosis with ocular features (obsolete MONDO:0020266)","secondary_identifiers":["Orphanet:98696"],"termid":"MONDO:0020266","xrefs":{"Monarch":{"xref_id":"0020266"}}}


id: MONDO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 1p deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the short arm (p) of chromosome 1. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 1p deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 1","termid":"MONDO:0016866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 1","secondary_identifiers":["icd11.foundation:1004815242","MEDGEN:208633","MESH:C535591","NCIT:C36501","Orphanet:261857","UMLS:C0795796","GARD:3730"],"synonyms":[{"name":"1p deletion","type":"related"},{"name":"1p monosomy","type":"related"},{"name":"chromosome 1p deletion","type":"related"},{"name":"del(1p)","type":"related"},{"name":"deletion 1p","type":"related"},{"name":"loss of chromosome 1p","type":"related"},{"name":"monosomy 1p","type":"related"},{"name":"partial deletion of chromosome 1p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 1","type":"exact"},{"name":"partial monosomy 1p","type":"related"},{"name":"partial monosomy of chromosome 1p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 1","type":"exact"}],"termid":"MONDO:0016883","xrefs":{"Monarch":{"xref_id":"0016883"}}}


id: PBO:0017073
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae RPR1","termid":"PBO:0017073"}


id: MONDO:0021964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"developmental disability","termid":"MONDO:0005287"},{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bagatelle Cassidy syndrome","secondary_identifiers":["UMLS:C2931616","MESH:C537796","GARD:398","MEDGEN:444100"],"synonyms":[{"name":"macrocephaly short limbs deafness","type":"related"},{"name":"macrocephaly, hypertelorism, short limbs, hearing loss, and developmental delay","type":"related"}],"termid":"MONDO:0021964","xrefs":{"Monarch":{"xref_id":"0021964"}}}


id: MONDO:0018505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of small intestine neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of small intestine (obsolete MONDO:0018505)","secondary_identifiers":["Orphanet:423793"],"synonyms":[{"name":"rare small intestine neoplasm","type":"exact"},{"name":"rare tumor of small bowel","type":"exact"}],"termid":"MONDO:0018505","xrefs":{"Monarch":{"xref_id":"0018505"}}}


id: MONDO:0011404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caronte","secondary_identifiers":["MEDGEN:349004","OMIM:604172","UMLS:C1858724"],"synonyms":[{"name":"Car","type":"related"},{"name":"Caronte","type":"exact"}],"termid":"MONDO:0011404","xrefs":{"Monarch":{"xref_id":"0011404"}}}


id: PBO:0082757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate with other rods to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082757"}


id: FYPO:0005172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of uracil into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal uracil import","termid":"FYPO:0005170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased uracil import","synonyms":[{"name":"increased uracil import across plasma membrane","type":"exact"},{"name":"increased uracil import during mitotic cell cycle","type":"related"},{"name":"increased uracil import during vegetative growth","type":"exact"},{"name":"increased uracil import into cell","type":"exact"},{"name":"increased uracil uptake","type":"exact"}],"termid":"FYPO:0005172"}


id: GO:2000315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0045743"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"positive regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000315"}


id: MONDO:0020379
data:
  {"annotated_genes":["SJAG_03815","SJAG_04567","SJAG_02919"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86669,86668,86670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013411"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset partial cataract","termid":"MONDO:0020377"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset zonular cataract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98995","UMLS:C5681642","GARD:1898","MEDGEN:1842642","MESH:C535342"],"termid":"MONDO:0020379","terms_by_termid":{"MONDO:0013411":null},"xrefs":{"Monarch":{"xref_id":"0020379"}}}


id: PATO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's lacking a phosphate (PO4) group.","direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephosphorylated","termid":"PATO:0002263"}


id: PBO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse3","termid":"PBO:0005424"}


id: PBO:0069090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 337, pseudogene","termid":"PBO:0069090"}


id: PBO:0041739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin regulated spectrin associated protein 1","termid":"PBO:0041739"}


id: MONDO:0957460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal perforation","termid":"MONDO:0006807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"spontaneous intestinal perforation","secondary_identifiers":["Orphanet:645793","MEDGEN:856598","UMLS:C3897004","icd11.foundation:1355081169"],"termid":"MONDO:0957460","xrefs":{"Monarch":{"xref_id":"0957460"}}}


id: RO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"preceded_by","termid":"BFO:0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_preceded_by","termid":"RO:0002087"}


id: PBO:0062895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXCT1 antisense RNA 1","termid":"PBO:0062895"}


id: PBO:0057736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1324","termid":"PBO:0057736"}


id: MONDO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discharge or drainage of fluid from the ear.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discharging ear","secondary_identifiers":["UMLS:C0155540","DOID:10261","ICD9:388.6","MEDGEN:57608","ICD9:388.60"],"termid":"MONDO:0000988","xrefs":{"Monarch":{"xref_id":"0000988"}}}


id: FYPO:0003330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the new mitotic spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to new mitotic spindle pole body","synonyms":[{"name":"normal asymmetric protein localization to new mitotic spindle pole body","type":"exact"},{"name":"normal protein localisation to new mitotic spindle pole body","type":"exact"},{"name":"normal protein localization to new mitotic SPB","type":"exact"},{"name":"normal protein localization to new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal protein localization to new spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0003330"}


id: GO:1903636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein insertion into mitochondrial outer membrane.","definition_xrefs":["PMID:16374546","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of protein targeting to mitochondrion","termid":"GO:1903214"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein insertion into mitochondrial outer membrane","termid":"GO:0045040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006605","GO:0007005","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of protein insertion into mitochondrial outer membrane","synonyms":[{"name":"regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"regulation of protein transport into mitochondrial outer membrane","type":"exact"}],"termid":"GO:1903636"}


id: PBO:0047061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A opposite strand","termid":"PBO:0047061"}


id: MONDO:0015099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral polymicrogyria","termid":"MONDO:0017092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"unilateral hemispheric polymicrogyria","secondary_identifiers":["MEDGEN:1842283","icd11.foundation:1318599015","GARD:19777","Orphanet:101071","UMLS:C5681804"],"termid":"MONDO:0015099","xrefs":{"Monarch":{"xref_id":"0015099"}}}


id: GO:0071512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus that occurs in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in conjugation with cellular fusion (obsolete GO:0071512)","synonyms":[{"name":"MAPK import into nucleus involved in mating response","type":"related"},{"name":"conjugation with cellular fusion, MAPK import into nucleus","type":"exact"},{"name":"conjugation with cellular fusion, nuclear translocation of MAPK","type":"narrow"},{"name":"nuclear translocation of MAPK involved in conjugation with cellular fusion","type":"narrow"},{"name":"nuclear translocation of MAPK involved in mating response","type":"related"}],"termid":"GO:0071512"}


id: GO:1903154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any glucose transmembrane transporter activity that is involved in glucose import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GOC:TermGenie","GO_REF:0000061","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete glucose transmembrane transporter activity involved in glucose import into cell (obsolete GO:1903154)","synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity involved in glucose import into cell","type":"related"},{"name":"glucose permease activity involved in glucose import into cell","type":"exact"},{"name":"glucose transmembrane transporter activity involved in glucose import into cell","type":"exact"},{"name":"lactose/glucose efflux transporter activity involved in glucose import into cell","type":"narrow"}],"termid":"GO:1903154"}


id: GO:0061868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hepatic stellate cell from one site to another.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast migration","termid":"GO:0010761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell migration","termid":"GO:0061868"}


id: PBO:0038734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7A","termid":"PBO:0038734"}


id: PBO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA9 antisense RNA 1","termid":"PBO:0051902"}


id: MONDO:0007180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Axenfeld-Rieger anomaly with partially absent eye muscles, distinctive face, hydrocephaly, and skeletal abnormalities","secondary_identifiers":["MEDGEN:349489","MESH:C566234","OMIM:109120","Orphanet:1831","UMLS:C1862373"],"synonyms":[{"name":"Axenfeld-Rieger anomaly with partially absent eye muscles, distinctive face, hydrocephaly, and skeletal abnormalities","type":"exact"},{"name":"De Hauwere syndrome","type":"related"},{"name":"iris dysplasia with ocular hypertelorism, psychomotor retardation, and sensorineural deafness","type":"related"}],"termid":"MONDO:0007180","xrefs":{"Monarch":{"xref_id":"0007180"}}}


id: PBO:0090816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster protein, implicated in respiratory complex assembly","termid":"PBO:0090816"}


id: GO:0010889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"regulates","term_name":"triglyceride storage","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of triglyceride storage","synonyms":[{"name":"regulation of sequestering of triacylglycerol","type":"exact"},{"name":"regulation of sequestering of triglyceride","type":"exact"},{"name":"regulation of triacylglycerol sequestration","type":"exact"}],"termid":"GO:0010889"}


id: PBO:0077357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 97 pseudogene 1","termid":"PBO:0077357"}


id: PBO:0060274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 8","termid":"PBO:0060274"}


id: GO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["PMID:12154375","ISBN:0781735149","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell activation","synonyms":[{"name":"regulation of NK T lymphocyte activation","type":"exact"},{"name":"regulation of NK T-cell activation","type":"exact"},{"name":"regulation of NK T-lymphocyte activation","type":"exact"},{"name":"regulation of NKT cell activation","type":"exact"},{"name":"regulation of NT cell activation","type":"exact"},{"name":"regulation of natural T cell activation","type":"exact"},{"name":"regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051133"}


id: SO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL9 RNA leader sequence to the 5' end of an mRNA. SL9 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL9_acceptor_site","synonyms":[{"name":"SL9 acceptor site","type":"exact"}],"termid":"SO:0001754"}


id: MONDO:0017715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase deficiency","secondary_identifiers":["MEDGEN:266222","OMIM:231530","Orphanet:309127","UMLS:C1291230","MESH:C535310","GARD:21319"],"termid":"MONDO:0017715","xrefs":{"Monarch":{"xref_id":"0017715"}}}


id: PBO:0055473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2906","termid":"PBO:0055473"}


id: PBO:0076864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 13B","termid":"PBO:0076864"}


id: PBO:0088544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, 7SK RNA methyltransferase Bmc1","termid":"PBO:0088544"}


id: MOD:00405
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Applied Biosystems original isotope-coded affinity tag d8 reagent.","definition_xrefs":["Unimod:12#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Applied Biosystems original ICAT(TM) d8 modified cysteine","synonyms":[{"name":"Applied Biosystems original ICAT(TM) d8","type":"related"},{"name":"ICAT-D:2H(8)","type":"related"}],"termid":"MOD:00405"}


id: MONDO:0019242
data:
  {"annotated_genes":["SJAG_03290","SJAG_04149","SJAG_00944","SJAG_02433","SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[86034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[85276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100058"},{"annotations":[84878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[84967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of branched-chain amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00944":null,"SJAG_02433":null,"SJAG_03069":null,"SJAG_03290":null,"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of branched-chain amino acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79197","SCTID:116020001","UMLS:C0342712","icd11.foundation:5456505","GARD:18971","MEDGEN:87452"],"synonyms":[{"name":"branched chain amino acid metabolism disorder","type":"related"},{"name":"disorder of branched chain amino acid metabolism","type":"related"},{"name":"disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn branched-chain amino acid metabolic process disorder","type":"exact"},{"name":"inborn disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn error of branched-chain amino acid metabolic process","type":"exact"},{"name":"rare inborn error of branched-chain amino acid metabolic process","type":"exact"}],"termid":"MONDO:0019242","terms_by_termid":{"MONDO:0009529":null,"MONDO:0009603":null,"MONDO:0009666":null,"MONDO:0014057":null,"MONDO:0100058":null},"xrefs":{"Monarch":{"xref_id":"0019242"}}}


id: MOD:01432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4S)-4,5-dihydroxyleucine.","definition_xrefs":["ChEBI:141819","PubMed:3718926","RESID:AA0446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated leucine","termid":"MOD:01412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4S)-4,5-dihydroxyleucine","synonyms":[{"name":"(2S,4S)-2-amino-4,5-dihydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"(4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"MOD_RES (4S)-4,5-dihydroxyleucine","type":"exact"},{"name":"gamma,delta-dihydroxyleucine","type":"exact"}],"termid":"MOD:01432"}


id: MONDO:0024263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aspiration of meconium, blood, amniotic fluid or gastric contents around the time of delivery resulting in clinical symptoms from airway obstruction, parenchymal injury, and ventilation-perfusion mismatch. This may lead to persistent pulmonary hypertension in the newborn.","definition_xrefs":["NCIT:C118312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal aspiration syndrome","secondary_identifiers":["MEDGEN:578767","SCTID:276533002","UMLS:C0349468"],"termid":"MONDO:0024263","xrefs":{"Monarch":{"xref_id":"0024263"}}}


id: GO:0032129
data:
  {"annotated_genes":["SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109274],"is_not":false,"summary":null,"term":"GO:0032129"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + H2O = histone H3 L-lysine (position 9) + acetate. This reaction represents the removal of an acetyl group from lysine at position 9 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0016810","GO:0033558","GO:0016787","GO:0003674","GO:0140096","GO:0019213","GO:0003824"],"is_obsolete":false,"name":"histone H3K9 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K9 deacetylase activity","type":"exact"},{"name":"histone H3K9 deacetylase activity","type":"broad"},{"name":"histone deacetylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0032129","terms_by_termid":{"GO:0032129":null}}


id: GO:0035272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the exocrine system over time, from its formation to a mature structure. The exocrine system is a system of hormones and glands, where the glands secrete straight to a target site via ducts or tubes. The human exocrine system includes the salivary glands, sweat glands and many glands of the digestive system.","definition_xrefs":["Wikipedia:Exocrine_gland","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exocrine system development","termid":"GO:0035272"}


id: MOD:01157
data:
  {"annotated_genes":["SJAG_02498","SJAG_02504","SJAG_03671","SJAG_03032","SJAG_01162","SJAG_02205","SJAG_01671","SJAG_00464","SJAG_00096","SJAG_02766","SJAG_02183","SJAG_00254","SJAG_01626","SJAG_03012","SJAG_00733","SJAG_02972","SJAG_00288","SJAG_03524","SJAG_04553","SJAG_02592","SJAG_00432","SJAG_00043","SJAG_03861","SJAG_03632","SJAG_02489","SJAG_04953","SJAG_04125","SJAG_01587","SJAG_04067","SJAG_04149","SJAG_02260","SJAG_00937","SJAG_00827","SJAG_02435","SJAG_00784","SJAG_04789","SJAG_01766","SJAG_01029","SJAG_03290","SJAG_02980","SJAG_02472","SJAG_03641","SJAG_03914","SJAG_04238","SJAG_02694","SJAG_05230","SJAG_02388","SJAG_02827","SJAG_02902","SJAG_00109","SJAG_02763","SJAG_00331","SJAG_04972","SJAG_01970","SJAG_02522","SJAG_00318","SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"},{"annotations":[80512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"},{"annotations":[80197,80194,80235,80350,80354,80466,80341,80322,80209,80432,80335,80208,80463,80405,80258,80393,80214,80279,80410,80196,80464,80328,80336,80292,80280,80293,80195,80207,80302,80294,80330,80342,80439,80329,80507,80360,80317,80506,80343,80321,80462,80331,80318,80319,80281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"},{"annotations":[80230,80394,80500,80452,80215,80474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"},{"annotations":[80387,80469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"},{"annotations":[80401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[80220,80400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"},{"annotations":[80418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"},{"annotations":[80487,80265,80307,80356,80367,80486,80262,80346,80229,80226,80203,80467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00128"},{"annotations":[80264,119217,119214,80263,119215,119216,119297,119298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[80251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"},{"annotations":[80259,80260,80491,80242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"A protein modification considered either as modified amino acid residues derived from natural amino acids, as a replacement by another natural amino acid, or as a replacement by an unnatural amino acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00318":null,"SJAG_00331":null,"SJAG_00432":null,"SJAG_00464":null,"SJAG_00733":null,"SJAG_00784":null,"SJAG_00827":null,"SJAG_00937":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01587":null,"SJAG_01626":null,"SJAG_01671":null,"SJAG_01766":null,"SJAG_01970":null,"SJAG_02183":null,"SJAG_02205":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02450":null,"SJAG_02472":null,"SJAG_02489":null,"SJAG_02498":null,"SJAG_02504":null,"SJAG_02522":null,"SJAG_02592":null,"SJAG_02694":null,"SJAG_02763":null,"SJAG_02766":null,"SJAG_02827":null,"SJAG_02902":null,"SJAG_02972":null,"SJAG_02980":null,"SJAG_03012":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_03524":null,"SJAG_03632":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04149":null,"SJAG_04238":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04953":null,"SJAG_04972":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by amino acid modified","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:01157","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00042":null,"MOD:00046":null,"MOD:00050":null,"MOD:00123":null,"MOD:00126":null,"MOD:00127":null,"MOD:00128":null,"MOD:00159":null,"MOD:00226":null,"MOD:00689":null,"MOD:00793":null,"MOD:01154":null}}


id: GO:1901752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene A4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"leukotriene A4 catabolic process","synonyms":[{"name":"leukotriene A4 breakdown","type":"exact"},{"name":"leukotriene A4 catabolism","type":"exact"},{"name":"leukotriene A4 degradation","type":"exact"}],"termid":"GO:1901752"}


id: PBO:0083134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; dephosphorylates T1 and S5 in  C-terminal domain (CTD) of RNA polymerase II largest subunit, Rpo21p; autoregulates turnover of its mRNA; has a cysteine-rich motif required for function and conserved in eukaryotes; shuttles between the nucleus and cytoplasm; RTR1 has a paralog, RTR2, that arose from the whole genome duplication","termid":"PBO:0083134"}


id: FYPO:0000472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mating type switching is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mating type switching","synonyms":[{"name":"mating type switching: normal","type":"related"},{"name":"normal mating type switching during mitotic cell cycle","type":"related"},{"name":"normal mating type switching during vegetative growth","type":"exact"}],"termid":"FYPO:0000472"}


id: PBO:0078711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-6","termid":"PBO:0078711"}


id: GO:0051692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages, as carried out by individual cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular oligosaccharide catabolic process (obsolete GO:0051692)","synonyms":[{"name":"cellular oligosaccharide breakdown","type":"exact"},{"name":"cellular oligosaccharide catabolism","type":"exact"},{"name":"cellular oligosaccharide degradation","type":"exact"}],"termid":"GO:0051692"}


id: PBO:0074934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 101","termid":"PBO:0074934"}


id: PBO:0072954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase","termid":"PBO:0072954"}


id: GO:0097145
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAK, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAK complex","termid":"GO:0097145"}


id: PBO:0029757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_5'-adenosine_monophosphate_hydrolase_activity","termid":"PBO:0029757"}


id: PBO:0040849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 3","termid":"PBO:0040849"}


id: PBO:0045000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicer 1, ribonuclease III","termid":"PBO:0045000"}


id: SO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains the code for two gene products.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycistronic","termid":"SO:0000880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic","termid":"SO:0000879"}


id: FYPO:0001307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of long-chain fatty acid-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000654"],"is_obsolete":false,"name":"decreased long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"decreased lcfa-ligase activity","type":"exact"},{"name":"reduced long-chain fatty acid-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001307"}


id: PBO:0046392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial PAS domain protein 1","termid":"PBO:0046392"}


id: PATO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000896 f2 fertility value (obsolete PATO:0000896)","termid":"PATO:0000896"}


id: PBO:0088771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"con-6 family conserved fungal protein","termid":"PBO:0088771"}


id: GO:0007305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the vitelline membrane portion of a chorion-containing eggshell. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitelline membrane formation","termid":"GO:0030704"},{"relation_name":"part_of","term_name":"chorion-containing eggshell formation","termid":"GO:0007304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"vitelline membrane formation involved in chorion-containing eggshell formation","synonyms":[{"name":"vitelline membrane formation in chorion-containing eggshell","type":"exact"}],"termid":"GO:0007305"}


id: GO:0141191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of HRI-mediated signaling.","definition_xrefs":["PMID:38297121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of HRI-mediated signaling","termid":"GO:0141191"}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: MOD:01650
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-valine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine removal","termid":"MOD:01650"}


id: GO:1903850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cristae formation.","definition_xrefs":["GOC:pad","PMID:19279012","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"regulates","term_name":"cristae formation","termid":"GO:0042407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of cristae formation","termid":"GO:1903850"}


id: PBO:0029321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029321"}


id: PBO:0045391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 2","termid":"PBO:0045391"}


id: GO:0009771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Energized reaction-center P680 chlorophylls on photosystem II donate an electron to a loosely bound acceptor molecule, the quinone Q, on the stromal surface of the thylakoid membrane. The result is charge separation; a negative charge on the stromal side of the thylakoid membrane and a positive charge on the luminal side.","definition_xrefs":["ISBN:0816017360","GOC:jid","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation in photosystem II (obsolete GO:0009771)","termid":"GO:0009771"}


id: SO:1000080
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000080 sequence_variant_increasing_rate_of_transcription (obsolete SO:1000080)","synonyms":[{"name":"mutation increasing rate of transcription","type":"related"},{"name":"sequence variation increasing rate of transcription","type":"exact"}],"termid":"SO:1000080"}


id: MONDO:0020374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerulean cataract is a type of hereditary congenital cataract distinguished by bluish and white opacifications in the superficial layers of the fetal lens nucleus and adult lens nucleus and characterized by reduced visual acuity in childhood, eventually necessitating extraction of the lens.","definition_xrefs":["Orphanet:98989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset partial cataract","termid":"MONDO:0020377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cerulean cataract","secondary_identifiers":["MESH:C537955","UMLS:C0344523","icd11.foundation:1188848969","SCTID:204138006","GARD:9508","ICD9:743.39","MEDGEN:138007"],"synonyms":[{"name":"blue-dot cataract","type":"exact"},{"name":"cataract, congenital, blue dot type 1","type":"related"},{"name":"cataract, congenital, cerulean type 1","type":"related"}],"termid":"MONDO:0020374","xrefs":{"Monarch":{"xref_id":"0020374"}}}


id: PBO:0052977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacritin","termid":"PBO:0052977"}


id: MONDO:0020546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome of immunologically mediated tissue damage that may occur following an allogeneic transplant, usually affecting the skin, liver, and GI tract. The onset is usually within one hundred days of transplantation or immunologic manipulation.","definition_xrefs":["NCIT:C4980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"graft versus host disease","termid":"MONDO:0013730"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute graft versus host disease","secondary_identifiers":["UMLS:C0856825","GARD:6544","ICD9:279.51","MEDGEN:208987","SCTID:402355000","MedDRA:10066260","ICD10CM:D89.810","icd11.foundation:83784921","Orphanet:99920"],"synonyms":[{"name":"GVHD, acute","type":"exact"},{"name":"acute GVHD","type":"related"},{"name":"acute graft vs. host disease","type":"exact"},{"name":"fulminant graft versus host disease","type":"exact"},{"name":"graft versus host disease, acute","type":"exact"}],"termid":"MONDO:0020546","xrefs":{"Monarch":{"xref_id":"0020546"}}}


id: PBO:0047463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 4","termid":"PBO:0047463"}


id: MONDO:0012357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any open-angle glaucoma in which the cause of the disease is a mutation in the WDR36 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete glaucoma 1, open angle, G (obsolete MONDO:0012357)","secondary_identifiers":["OMIM:609887","MESH:C563692"],"synonyms":[{"name":"GLC1G","type":"related"},{"name":"WDR36 open-angle glaucoma","type":"exact"},{"name":"glaucoma 1, open angle, G","type":"exact"},{"name":"glaucoma 1, open angle, type G","type":"exact"},{"name":"open-angle glaucoma caused by mutation in WDR36","type":"exact"}],"termid":"MONDO:0012357","xrefs":{"Monarch":{"xref_id":"0012357"}}}


id: GO:0032300
data:
  {"annotated_genes":["SJAG_02226","SJAG_01620","SJAG_02187","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71043,70398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032389"},{"annotations":[72230,69408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032301"}]},"cv_name":"cellular_component","definition":"Any complex formed of proteins that act in mismatch repair.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mismatch repair complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032300","terms_by_termid":{"GO:0032301":null,"GO:0032389":null}}


id: MONDO:0004020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mediastinal lymphoma with molecular, morphologic, immunophenotypic, and clinical features of both mediastinal (thymic) large B-cell lymphoma and classical Hodgkin lymphoma. The identification of this group of lymphomas, along with recent gene expression profiling results (PDL2 gene expression in both mediastinal (thymic) large B-cell lymphoma tissues and Hodgkin lymphoma cell lines), further supports the hypothesis that mediastinal (thymic) large B-cell lymphomas and classical Hodgkin lymphomas are related entities.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell lymphoma, unclassifiable, with features intermediate between diffuse large b-cell lymphoma and classical Hodgkin lymphoma","termid":"MONDO:0003658"},{"relation_name":"is_a","term_name":"mediastinal malignant lymphoma","termid":"MONDO:0004021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"mediastinal gray zone lymphoma","secondary_identifiers":["MEDGEN:233679","DOID:6867","NCIT:C37870","UMLS:C1334657"],"synonyms":[{"name":"mediastinal B-cell lymphoma, unclassifiable, with features Intermediate between diffuse large B-cell lymphoma and Classic Hodgkin lymphoma","type":"exact"},{"name":"mediastinal B-cell lymphoma, unclassifiable, with features Intermediate between diffuse large B-cell lymphoma and classical Hodgkin lymphoma","type":"exact"},{"name":"mediastinal Gray zone lymphoma","type":"exact"},{"name":"mediastinal Grey zone lymphoma","type":"exact"}],"termid":"MONDO:0004020","xrefs":{"Monarch":{"xref_id":"0004020"}}}


id: PBO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor (predicted)","termid":"PBO:0001006"}


id: PBO:0028490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-separate_mitotic_half_spindles_present","termid":"PBO:0028490"}


id: GO:0003212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the left cardiac atrium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left atrium morphogenesis","termid":"GO:0003212"}


id: GO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete conjugation (obsolete GO:0000746)","secondary_identifiers":["Wikipedia:Conjugation"],"termid":"GO:0000746"}


id: PBO:0068966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 210, pseudogene","termid":"PBO:0068966"}


id: PBO:0091088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane insertase Cox18","termid":"PBO:0091088"}


id: GO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal tissues.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal immune response","termid":"GO:0002385"},{"relation_name":"is_a","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal tolerance induction","termid":"GO:0002427"}


id: MONDO:0033673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 46","secondary_identifiers":["UMLS:C5436799","MEDGEN:1726728","DOID:0112164","OMIM:619095"],"synonyms":[{"name":"SPGF46","type":"exact"}],"termid":"MONDO:0033673","xrefs":{"Monarch":{"xref_id":"0033673"}}}


id: MONDO:0100079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SCN1A gene.","definition_xrefs":["OMIM:607208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 6","synonyms":[{"name":"DEE6","type":"exact"},{"name":"Dravet syndrome","type":"related"},{"name":"EIEE6","type":"exact"},{"name":"developmental and epileptic encephalopathy, 6","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 6","type":"exact"}],"termid":"MONDO:0100079","xrefs":{"Monarch":{"xref_id":"0100079"}}}


id: FYPO:0004171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell that is subject to glucose starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during glucose starvation","synonyms":[{"name":"normal RNA accumulation during glucose starvation","type":"related"},{"name":"normal RNA level during cellular response to glucose starvation","type":"exact"},{"name":"normal RNA level during glucose depletion","type":"exact"},{"name":"normal RNA level during glucose deprivation","type":"exact"},{"name":"normal RNA level during glucose limitation","type":"related"},{"name":"normal cellular RNA level during glucose starvation","type":"exact"},{"name":"normal mRNA level during glucose starvation","type":"narrow"},{"name":"normal transcript level during glucose starvation","type":"exact"}],"termid":"FYPO:0004171"}


id: GO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the proepicardium from its formation to the mature structure. The proepicardium is an outpouching of the septum transversum.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"septum transversum development","termid":"GO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proepicardium development","termid":"GO:0003342"}


id: PBO:0065106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C alpha","termid":"PBO:0065106"}


id: GO:0106115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cohesin dsDNA (leading strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitotic cohesin dsDNA (leading strand) loading (obsolete GO:0106115)","termid":"GO:0106115"}


id: MONDO:0018186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Aberrant chromosomes with no ends, i.e., circular.","definition_xrefs":["MESH:D012303"],"gene_count":0,"genotype_count":0,"name":"obsolete ring chromosome (obsolete MONDO:0018186)","secondary_identifiers":["Orphanet:363203"],"synonyms":[{"name":"supernumerary circular chromosome","type":"broad"}],"termid":"MONDO:0018186","xrefs":{"Monarch":{"xref_id":"0018186"}}}


id: MONDO:0011865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A brain disease characterized by autosomal dominant inheritance of fragile small blood vessels in the brain, leukoencephalopathy, increased risk of stroke, seizure and migraine and in some cases Axenfeld-Riegar anomaly that has material basis in heterozygous mutation in the COL4A1 gene on chromosome 13q34.","definition_xrefs":["DOID:0090125"],"gene_count":0,"genotype_count":0,"name":"obsolete COL4A1-related familial vascular leukoencephalopathy (obsolete MONDO:0011865)","termid":"MONDO:0011865","xrefs":{"Monarch":{"xref_id":"0011865"}}}


id: GO:0033173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a member of the NFAT protein family as a consequence of NFAT dephosphorylation by Ca(2+)-activated calcineurin. The cascade begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin dephosphorylates multiple phosphoserine residues on NFAT, resulting in the translocation of NFAT to the nucleus. The cascade ends with regulation of transcription by NFAT. The calcineurin-NFAT cascade lies downstream of many cell surface receptors, including G protein-coupled receptors (GPCRs) and receptor tyrosine kinases (RTKs) that signal to mobilize calcium ions (Ca2+).","definition_xrefs":["GOC:mah","PMID:12975316","PMID:15928679","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"calcineurin-NFAT signaling cascade","synonyms":[{"name":"calcineurin-NFAT signaling pathway","type":"related"},{"name":"calcineurin-NFAT signalling pathway","type":"related"}],"termid":"GO:0033173"}


id: PBO:0051255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-25-1 (pseudogene)","termid":"PBO:0051255"}


id: GO:0052360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont macromolecule (obsolete GO:0052360)","termid":"GO:0052360"}


id: GO:0051064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dTTP + thioredoxin disulfide + H2O = TTP + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["MetaCyc:1.17.4.2-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete TTP reductase activity (obsolete GO:0051064)","synonyms":[{"name":"TTP reduction","type":"related"}],"termid":"GO:0051064"}


id: MONDO:0019527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder which does not meet classification criteria used to establish the presence of other well-defined connective tissue diseases.","definition_xrefs":["NCIT:C116776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"undifferentiated connective tissue syndrome","secondary_identifiers":["SCTID:239918008","Orphanet:90002","UMLS:C0409999","GARD:19097","MedDRA:10071575","MEDGEN:592754"],"synonyms":[{"name":"UCTD","type":"exact"},{"name":"undifferentiated connective tissue disease","type":"exact"}],"termid":"MONDO:0019527","xrefs":{"Monarch":{"xref_id":"0019527"}}}


id: MONDO:0020853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitis/encephalopathy, mild, with reversible myelin vacuolization","secondary_identifiers":["MEDGEN:1648328","OMIM:618113","UMLS:C4722446"],"synonyms":[{"name":"Encephalitis/encephalopathy, mild, with reversible splenial lesion","type":"exact"},{"name":"MMERV","type":"exact"},{"name":"encephalitis/encephalopathy, mild, with reversible myelin vacuolization","type":"exact"}],"termid":"MONDO:0020853","xrefs":{"Monarch":{"xref_id":"0020853"}}}


id: PBO:0054830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2243","termid":"PBO:0054830"}


id: GO:0106158
data:
  {"annotated_genes":["SJAG_03154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111785],"is_not":false,"summary":null,"term":"GO:0106158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction:acyl-CoA + glycerophosphocholine = CoA + 1-acyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:18430972","PMID:27758859","RHEA:58476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycero-3-phosphocholine acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPACT activity","type":"exact"},{"name":"glycerophosphocholine O-acyltransferase activity","type":"exact"}],"termid":"GO:0106158","terms_by_termid":{"GO:0106158":null}}


id: PBO:0043878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB binding protein","termid":"PBO:0043878"}


id: GO:0060582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in commitment of a cell to a fate in a developmental field. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination involved in pattern specification","termid":"GO:0060582"}


id: PBO:0028698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process","termid":"PBO:0028698"}


id: PBO:0078402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 12-1","termid":"PBO:0078402"}


id: GO:0014803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the longitudinal sarcoplasmic reticulum envelope. The longitudinal sarcoplasmic reticulum lumen is continuous with the lumen contained within the terminal cisternae.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"},{"relation_name":"part_of","term_name":"longitudinal sarcoplasmic reticulum","termid":"GO:0014801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"longitudinal sarcoplasmic reticulum lumen","termid":"GO:0014803"}


id: PBO:0091675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional lncRNA of nc-tgp1, non-functional","termid":"PBO:0091675"}


id: PBO:0084305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron-sulfur protein subunit of succinate dehydrogenase; the complex couples the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; other members are Sdh1p, Sdh3p, and Sdh4p","termid":"PBO:0084305"}


id: GO:0046691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An apical plasma membrane part that forms a narrow enfolded luminal membrane channel, lined with numerous microvilli, that appears to extend into the cytoplasm of the cell. A specialized network of intracellular canaliculi is a characteristic feature of parietal cells of the gastric mucosa in vertebrates.","definition_xrefs":["GOC:mah","PMID:10700045","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"intracellular canaliculus","synonyms":[{"name":"canalicular membrane","type":"exact"}],"termid":"GO:0046691"}


id: PR:O94621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp109 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein usp109 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.12","synonyms":[{"name":"Spom972h-usp109","type":"exact"}],"termid":"PR:O94621"}


id: CHEBI:67229
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conduritol B epoxide","termid":"CHEBI:67229"}


id: PBO:0072471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA 2","termid":"PBO:0072471"}


id: GO:0102781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + isofucosterol + O2 + NADPH = (22alpha)-hydroxy-isofucosterol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isofucosterol hydroxylase activity (obsolete GO:0102781)","termid":"GO:0102781"}


id: PBO:0116782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR81 antisense RNA 1","termid":"PBO:0116782"}


id: MONDO:0006989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized collection of pus in the tissues that enclose the root of a tooth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periapical periodontitis","termid":"MONDO:0004508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppurative periapical periodontitis","secondary_identifiers":["NCIT:C34913","EFO:1001202","MEDGEN:10652","MESH:D010482","UMLS:C0031024","DOID:2562"],"synonyms":[{"name":"apical abscess","type":"exact"},{"name":"dentoalveolar abscess","type":"exact"},{"name":"periapical abscess","type":"exact"},{"name":"periapical dental abscess","type":"exact"},{"name":"suppurative apical periodontitis","type":"exact"}],"termid":"MONDO:0006989","xrefs":{"Monarch":{"xref_id":"0006989"}}}


id: GO:0019121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of linking a protein to peptidoglycan via the epsilon amino group of lysine to the diaminopimelic acid of the peptidoglycan.","definition_xrefs":["RESID:AA0218"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan-protein cross-linking via N6-mureinyl-L-lysine (obsolete GO:0019121)","termid":"GO:0019121"}


id: PBO:0026675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0026675"}


id: GO:0033471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-L-galactose, a substance composed of L-galactose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GDP-L-galactose metabolic process","synonyms":[{"name":"GDP-L-galactose metabolism","type":"exact"}],"termid":"GO:0033471"}


id: PBO:0071301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 24","termid":"PBO:0071301"}


id: GO:0047388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [glutamine synthetase]-O(4)-(5'-adenylyl)-L-tyrosine + phosphate = [glutamine synthetase]-L-tyrosine + ADP.","definition_xrefs":["RHEA:43716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase activity","secondary_identifiers":["EC:2.7.7.89","KEGG_REACTION:R03474","MetaCyc:GSDEADENYLATION-RXN"],"synonyms":[{"name":"[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase","type":"related"},{"name":"adenylyl(glutamine synthetase) hydrolase activity","type":"exact"},{"name":"adenylyl-L-glutamate:ammonia ligase (ADP-forming) adenylylhydrolase activity","type":"exact"},{"name":"adenylyl-[glutamate-ammonia ligase] hydrolase activity","type":"exact"},{"name":"adenylyl-glutamate-ammonia ligase hydrolase activity","type":"exact"},{"name":"adenylyl-glutamine-synthetasehydrolase activity","type":"exact"}],"termid":"GO:0047388"}


id: FYPO:0007678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in cellular membranes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:32320462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal membrane lipid distribution","termid":"FYPO:0006546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal sterol distribution","termid":"FYPO:0007678"}


id: PBO:0054096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1449","termid":"PBO:0054096"}


id: PBO:0034501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_late_mitotic_G2_phase","termid":"PBO:0034501"}


id: GO:0003735
data:
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action of a molecule that contributes to the structural integrity of the ribosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule 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id: PBO:0069749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1031, pseudogene","termid":"PBO:0069749"}


id: PBO:0001288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ras1","termid":"PBO:0001288"}


id: MONDO:0011342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SLC35A1-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case by repeated hemorrhagic incidents, including severe pulmonary hemorrhage.","definition_xrefs":["Orphanet:238459"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"SLC35A1-congenital disorder of glycosylation","secondary_identifiers":["GARD:12409","SCTID:723624008","UMLS:C1970344","MEDGEN:370234","DOID:0070258","MESH:C567040","OMIM:603585"],"synonyms":[{"name":"CDG IIf","type":"related"},{"name":"CDG syndrome type IIf","type":"exact"},{"name":"CDG-IIf","type":"exact"},{"name":"CDG2F","type":"exact"},{"name":"CMP-sialic acid transporter deficiency","type":"exact"},{"name":"SLC35A1-CDG","type":"exact"},{"name":"SLC35A1-CDG (CDG-IIf)","type":"related"},{"name":"SLC35A1-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIf","type":"exact"},{"name":"congenital disorder of glycosylation type 2f","type":"exact"},{"name":"congenital disorder of glycosylation type IIf","type":"exact"},{"name":"congenital disorder of glycosylation, type IIf","type":"related"}],"termid":"MONDO:0011342","xrefs":{"Monarch":{"xref_id":"0011342"}}}


id: GO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex.","definition_xrefs":["PMID:16153240","ISBN:0781735149","GOC:add","PMID:15531770","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"peptide or polysaccharide antigen processing and presentation of via MHC class II","type":"exact"}],"termid":"GO:0002504"}


id: GO:2000615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 acetylation (obsolete GO:2000615)","synonyms":[{"name":"regulation of histone H3 acetylation at K9","type":"exact"},{"name":"regulation of histone H3K9 acetylation","type":"exact"}],"termid":"GO:2000615"}


id: PBO:0059645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 11","termid":"PBO:0059645"}


id: PBO:0000558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron responsive transcriptional regulator, peptidase family (predicted)","termid":"PBO:0000558"}


id: GO:0090115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine in a DNA molecule that contributes to chromatin silencing.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete C-5 methylation on cytosine involved in chromatin silencing (obsolete GO:0090115)","termid":"GO:0090115"}


id: GO:1900945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of isoprene metabolic process","termid":"GO:1900944"},{"relation_name":"negatively_regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isoprene metabolic process","synonyms":[{"name":"down regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"down regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"down regulation of hemiterpene metabolic process","type":"exact"},{"name":"down regulation of hemiterpene metabolism","type":"exact"},{"name":"down regulation of isoprene metabolic process","type":"exact"},{"name":"down regulation of isoprene metabolism","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"down-regulation of hemiterpene metabolic process","type":"exact"},{"name":"down-regulation of hemiterpene metabolism","type":"exact"},{"name":"down-regulation of isoprene metabolic process","type":"exact"},{"name":"down-regulation of isoprene metabolism","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"downregulation of hemiterpene metabolic process","type":"exact"},{"name":"downregulation of hemiterpene metabolism","type":"exact"},{"name":"downregulation of isoprene metabolic process","type":"exact"},{"name":"downregulation of isoprene metabolism","type":"exact"},{"name":"inhibition of 2-methyl-1,3-butadiene metabolic process","type":"narrow"},{"name":"inhibition of 2-methyl-1,3-butadiene metabolism","type":"narrow"},{"name":"inhibition of hemiterpene metabolic process","type":"narrow"},{"name":"inhibition of hemiterpene metabolism","type":"narrow"},{"name":"inhibition of isoprene metabolic process","type":"narrow"},{"name":"inhibition of isoprene metabolism","type":"narrow"},{"name":"negative regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"negative regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"negative regulation of hemiterpene metabolic process","type":"exact"},{"name":"negative regulation of hemiterpene metabolism","type":"exact"},{"name":"negative regulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900945"}


id: GO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that activates or increases the rate of transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription by galactose","synonyms":[{"name":"activation of transcription by galactose","type":"narrow"},{"name":"stimulation of transcription by galactose","type":"narrow"},{"name":"up regulation of transcription by galactose","type":"exact"},{"name":"up-regulation of transcription by galactose","type":"exact"},{"name":"upregulation of transcription by galactose","type":"exact"}],"termid":"GO:0000411"}


id: PBO:0005615
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.20.4.1","termid":"PBO:0005615"}


id: PomGeneEx:0000006
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is not detectable under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent","synonyms":[{"name":"gene expression absent","type":"exact"},{"name":"gene product absent","type":"exact"}],"termid":"PomGeneEx:0000006"}


id: GO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via the activity of voltage-gated calcium channels.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051929)","synonyms":[{"name":"activation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"positive regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of calcium transport via voltage gated calcium channel","type":"exact"},{"name":"stimulation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"up regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"up-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"upregulation of calcium ion transport via voltage gated calcium channel","type":"exact"}],"termid":"GO:0051929"}


id: PATO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward.","definition_xrefs":["bdid:bdid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteverted","termid":"PATO:0001474"}


id: FYPO:0006030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable actin cortical patches.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cortical patches present in decreased numbers","termid":"FYPO:0004964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"actin cortical patches absent from cell","synonyms":[{"name":"absent actin cortical patches","type":"exact"},{"name":"actin cortical patches absent from cell during mitotic cell cycle","type":"related"},{"name":"actin cortical patches absent from cell during vegetative growth","type":"exact"},{"name":"actin patches absent from cell","type":"exact"}],"termid":"FYPO:0006030"}


id: PBO:0030394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_multiseptate_vegetative_cell","termid":"PBO:0030394"}


id: PBO:0062510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily I member 2","termid":"PBO:0062510"}


id: PBO:0057571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 766","termid":"PBO:0057571"}


id: PR:Q9UUB3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.11","synonyms":[{"name":"Spom972h-meu18","type":"exact"}],"termid":"PR:Q9UUB3"}


id: PBO:0113380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative kinase; suppressor of GTPase mutant; dosage-sensitive modulator of mitochondrial DNA (mtDNA) homeostasis; localizes to the mitochondrial matrix, and to the cytosol and clathrin-coated vesicles in HTP studies; similar to bovine rhodopsin kinase; may have a role in intracellular sterol transport","termid":"PBO:0113380"}


id: MONDO:0054701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kleefstra syndrome","termid":"MONDO:0012455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kleefstra syndrome 2","secondary_identifiers":["MEDGEN:1623903","UMLS:C4540395","OMIM:617768","DOID:0080598","GARD:18382"],"synonyms":[{"name":"KLEFS2","type":"related"},{"name":"Kleefstra syndrome 2","type":"exact"}],"termid":"MONDO:0054701","xrefs":{"Monarch":{"xref_id":"0054701"}}}


id: MONDO:0014372
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86190],"is_not":false,"summary":null,"term":"MONDO:0014372"}]},"cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the TTLL5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"TTLL5-related retinopathy","termid":"MONDO:1040038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16022","MEDGEN:862938","OMIM:615860","UMLS:C4014501","DOID:0111025"],"synonyms":[{"name":"CORD19","type":"exact"},{"name":"TTLL5 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 19","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in TTLL5","type":"exact"},{"name":"cone-rod dystrophy type 19","type":"exact"}],"termid":"MONDO:0014372","terms_by_termid":{"MONDO:0014372":null},"xrefs":{"Monarch":{"xref_id":"0014372"}}}


id: MONDO:0015902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Major hypertriglyceridemia comprises a group of endocrine diseases characterized by permanently high levels of triglycerides (TG) in the blood (higher than 4g/L after 12 hours of fasting) and an increased risk of acute pancreatitis, making screening essential.","definition_xrefs":["Orphanet:181425"],"gene_count":0,"genotype_count":0,"name":"obsolete major hypertriglyceridemia (obsolete MONDO:0015902)","termid":"MONDO:0015902","xrefs":{"Monarch":{"xref_id":"0015902"}}}


id: PBO:0031787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_sister_chromatid_segregation","termid":"PBO:0031787"}


id: GO:1905694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidic acid biosynthetic process.","definition_xrefs":["GOC:PARL","GO_REF:0000058","PMID:23767959","GOC:TermGenie","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"regulation of phosphatidic acid biosynthetic process","termid":"GO:1905693"},{"relation_name":"negatively_regulates","term_name":"phosphatidic acid biosynthetic process","termid":"GO:0006654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidic acid biosynthetic process","synonyms":[{"name":"down regulation of phosphatidic acid anabolism","type":"exact"},{"name":"down regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"down regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidic acid formation","type":"exact"},{"name":"down regulation of phosphatidic acid synthesis","type":"exact"},{"name":"down-regulation of phosphatidic acid anabolism","type":"exact"},{"name":"down-regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidic acid formation","type":"exact"},{"name":"down-regulation of phosphatidic acid synthesis","type":"exact"},{"name":"downregulation of phosphatidic acid anabolism","type":"exact"},{"name":"downregulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"downregulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidic acid formation","type":"exact"},{"name":"downregulation of phosphatidic acid synthesis","type":"exact"},{"name":"inhibition of phosphatidic acid anabolism","type":"narrow"},{"name":"inhibition of phosphatidic acid biosynthesis","type":"narrow"},{"name":"inhibition of phosphatidic acid biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidic acid formation","type":"narrow"},{"name":"inhibition of phosphatidic acid synthesis","type":"narrow"},{"name":"negative regulation of phosphatidic acid anabolism","type":"exact"},{"name":"negative regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidic acid formation","type":"exact"},{"name":"negative regulation of phosphatidic acid synthesis","type":"exact"}],"termid":"GO:1905694"}


id: GO:0050236
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114195],"is_not":false,"summary":null,"term":"GO:0050236"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pyridoxine = H+ + NADPH + pyridoxal.","definition_xrefs":["RHEA:16129","EC:1.1.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldo-keto reductase (NADPH) activity","termid":"GO:0004033"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyridoxine:NADP 4-dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PYRIDOXINE-4-DEHYDROGENASE-RXN","KEGG_REACTION:R01708"],"synonyms":[{"name":"PL reductase activity","type":"related"},{"name":"pyridoxal reductase activity","type":"related"},{"name":"pyridoxin dehydrogenase activity","type":"related"},{"name":"pyridoxine dehydrogenase activity","type":"related"},{"name":"pyridoxine:NADP 4-oxidoreductase activity","type":"related"},{"name":"pyridoxol dehydrogenase activity","type":"related"}],"termid":"GO:0050236","terms_by_termid":{"GO:0050236":null}}


id: PBO:0044383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7","termid":"PBO:0044383"}


id: GO:0090633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + KDN = diphosphate + CMP-KDN.","definition_xrefs":["PMID:8381411","PMID:11479279","ISBN:978-1-60805-067-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"keto-deoxynonulosonic acid (KDN) cytidylyltransferase activity","synonyms":[{"name":"CMP-KDN synthetase activity","type":"exact"},{"name":"cytidine 5'-monophospho-2-Keto-3-deoxy-D-glycero-D-galacto-nononic acid synthetase activity","type":"exact"}],"termid":"GO:0090633"}


id: SO:1000098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The translational product is truncated at its C-terminus, usually a result of a nonsense codon change in transcript (SO:1000062).","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000098 sequence_variant_causing_polypeptide_truncation (obsolete SO:1000098)","synonyms":[{"name":"mutation causing polypeptide truncation","type":"related"},{"name":"sequence variant causing polypeptide truncation","type":"exact"}],"termid":"SO:1000098"}


id: PBO:0087773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing Small Subunit (SSU) processome complex; involved in production of 18S rRNA and assembly of small ribosomal subunit","termid":"PBO:0087773"}


id: PBO:0017539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly protein Mug65 (predicted)","termid":"PBO:0017539"}


id: PBO:0049469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF inducible zinc finger protein 1","termid":"PBO:0049469"}


id: MONDO:0006359
data:
  {"annotated_genes":["SJAG_00991","SJAG_00289","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86686,86688,86687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"}]},"cv_name":"mondo","definition":"A soft tissue neoplasm composed of perivascular epithelioid cells. Representative examples include angiomyolipoma, clear cell-sugar-tumor of the lung, and lymphangioleiomyomatosis.","definition_xrefs":["NCIT:C38150"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pericytic neoplasm","termid":"MONDO:0002604"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"neoplasm with perivascular epithelioid cell differentiation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22383","ONCOTREE:PECOMA","DOID:2643","MEDGEN:266246","Orphanet:595133","MESH:D054973","UMLS:C1300127","EFO:1000464"],"synonyms":[{"name":"PEComa","type":"exact"},{"name":"neoplasm with perivascular epithelioid cell differentiation","type":"exact"},{"name":"perivascular epithelioid cell neoplasm","type":"exact"},{"name":"perivascular epithelioid cell tumor","type":"exact"},{"name":"perivascular epithelioid cell tumour","type":"exact"},{"name":"tumor with perivascular epithelioid cell differentiation","type":"exact"},{"name":"tumour with perivascular epithelioid cell differentiation","type":"exact"}],"termid":"MONDO:0006359","terms_by_termid":{"MONDO:0011705":null},"xrefs":{"Monarch":{"xref_id":"0006359"}}}


id: PBO:0080842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 6","termid":"PBO:0080842"}


id: GO:0047804
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68124],"is_not":false,"summary":null,"term":"GO:0047804"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-substituted L-cysteine + H2O = a thiol + NH4+ + pyruvate.","definition_xrefs":["RHEA:18121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"cysteine-S-conjugate beta-lyase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["EC:4.4.1.13","MetaCyc:RXN-6763"],"synonyms":[{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating) activity","type":"related"},{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"S-alkylcysteine lyase activity","type":"related"},{"name":"alkylcysteine lyase activity","type":"related"},{"name":"cystathionine beta-lyase activity","type":"related"},{"name":"cysteine conjugate beta-lyase activity","type":"related"},{"name":"cysteine-S-conjugate b-lyase activity","type":"exact"},{"name":"glutamine transaminase K/cysteine conjugate beta-lyase activity","type":"related"}],"termid":"GO:0047804","terms_by_termid":{"GO:0047804":null}}


id: PR:O14188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng2 gene.","definition_xrefs":["UniProtKB:O14188","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"Ring assembly protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rng2","type":"exact"}],"termid":"PR:O14188"}


id: GO:0048914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of compact myelin sheaths around the axons of the anterior lateral line nerve.","definition_xrefs":["PMID:12112375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelination of lateral line nerve axons","termid":"GO:0048897"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination of anterior lateral line nerve axons","termid":"GO:0048914"}


id: GO:0003399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a cytoneme are shaped. A cytoneme is a long, thin and polarized actin-based cytoplasmic extension that projects from a cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoneme morphogenesis","termid":"GO:0003399"}


id: GO:1900438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"narrow"}],"termid":"GO:1900438"}


id: PBO:0000602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb2 (predicted)","termid":"PBO:0000602"}


id: GO:0035796
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites into the cell, consisting of 4 subunits: a transmembrane substrate-binding protein (known as the S component), and an energy-coupling module that comprises two ATP-binding proteins (known as the A and A' components) and a transmembrane protein (known as the T component). Transport of the substrate across the membrane is driven by the hydrolysis of ATP.","definition_xrefs":["PMID:20972419","PMID:18931129","PMID:21135102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex, transmembrane substrate-binding subunit-containing","synonyms":[{"name":"ATP-binding cassette (ABC) transporter complex, ECF-type","type":"exact"},{"name":"energy coupling factor (ECF)-type ABC transporter","type":"exact"},{"name":"energy-coupling factor transporter","type":"exact"}],"termid":"GO:0035796"}


id: PBO:0069132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 382, pseudogene","termid":"PBO:0069132"}


id: MONDO:0958196
data:
  {"annotated_genes":["SJAG_02782","SJAG_03406"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86123,86124],"is_not":false,"summary":null,"term":"MONDO:0958196"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, early-onset","termid":"MONDO:0957599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02782":null,"SJAG_03406":null},"genotype_count":0,"is_obsolete":false,"name":"epilepsy, early-onset, 3, with or without developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882674","OMIM:620465","MEDGEN:1847911","DOID:0070472"],"termid":"MONDO:0958196","terms_by_termid":{"MONDO:0958196":null},"xrefs":{"Monarch":{"xref_id":"0958196"}}}


id: GO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a mast cell in response to an external stimulus.","definition_xrefs":["PMID:12789214","GOC:add","PMID:11292027","PMID:16448392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"mast cell migration","termid":"GO:0097531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell chemotaxis","termid":"GO:0002551"}


id: PBO:0040483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 3 like","termid":"PBO:0040483"}


id: FYPO:0003787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, and extend beyond the spindle pole body. The protruding spindle microtubules are surrounded by an extension of the nuclear envelope.","definition_xrefs":["PMID:17486116","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"},{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"},{"relation_name":"is_a","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000120","FYPO:0002403","FYPO:0002399","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"long mitotic spindle microtubules protruding beyond spindle pole body","synonyms":[{"name":"elongated mitotic spindle microtubules protruding from spindle pole body","type":"exact"},{"name":"elongated mitotic spindle microtubules protruding from spindle pole body during M-phase","type":"exact"},{"name":"long mitotic spindle microtubules protruding beyond spindle pole body, with nuclear envelope deformation","type":"related"},{"name":"long mitotic spindle microtubules protruding beyond spindle pole body, with nuclear envelope protrusion","type":"exact"},{"name":"long mitotic spindle microtubules protruding from SPB","type":"exact"},{"name":"long mitotic spindle microtubules protruding from spindle pole body during mitotic cell cycle","type":"related"},{"name":"long mitotic spindle microtubules protruding from spindle pole body during vegetative growth","type":"exact"},{"name":"long nuclear microtubules protruding through nuclear envelope","type":"related"},{"name":"mitotic spindle microtubules protruding beyond spindle pole body","type":"broad"},{"name":"nuclear envelope protrusion with long mitotic spindle microtubules protruding beyond spindle pole body","type":"exact"}],"termid":"FYPO:0003787"}


id: GO:0071025
data:
  {"annotated_genes":["SJAG_02622","SJAG_02382","SJAG_03984","SJAG_03745","SJAG_01830","SJAG_04006","SJAG_01412","SJAG_04768","SJAG_05243","SJAG_03448","SJAG_04601","SJAG_04283","SJAG_04824","SJAG_04321","SJAG_04500","SJAG_01717","SJAG_04586","SJAG_04084","SJAG_03883","SJAG_01818","SJAG_02879","SJAG_04025","SJAG_04198","SJAG_03276","SJAG_01540","SJAG_01064","SJAG_03939","SJAG_04818","SJAG_00961","SJAG_00456","SJAG_00854","SJAG_00452","SJAG_01529","SJAG_01521","SJAG_04153","SJAG_01431","SJAG_03179","SJAG_01331","SJAG_02005","SJAG_01176","SJAG_04360","SJAG_00701","SJAG_02723","SJAG_16455","SJAG_02275","SJAG_00425","SJAG_02720","SJAG_01702","SJAG_01867","SJAG_03454","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62271],"is_not":false,"summary":null,"term":"GO:0071025"},{"annotations":[89533],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[117922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180036"},{"annotations":[115693,94719,72893,74144,89193,95676,96298,88829,71273,72083,70906,92833,100824,115251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071028"},{"annotations":[104089,98879,117923,92002,91620,90623,107255,90547,96499,109040,109059,111098,87240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[74308,93203,97018,117924,69889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[116139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[106107,94760,92124,117925,109060,109587,115356,88585,87241,90548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[88118,70353,106066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"},{"annotations":[99560,117926,111654,70352,102778,69894,115184,112554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"},{"annotations":[70348,106265,69890,72084,88119,107258,77271,115253,70907,115695,74799,101873,97020,71274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071035"},{"annotations":[69891,70349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[69892,70350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[90387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071027"},{"annotations":[106455],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[90063,94721,115348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180037"},{"annotations":[88124,72085,70908,69893,77272,71275,115698,70351,74800,106269,101877,99404,107264,97026,115256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant RNAs.","definition_xrefs":["GOC:dgf","PMID:18644474","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00701":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01064":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01529":null,"SJAG_01540":null,"SJAG_01702":null,"SJAG_01717":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_01867":null,"SJAG_02005":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03179":null,"SJAG_03276":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04500":null,"SJAG_04586":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05243":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA surveillance","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA quality control","type":"exact"},{"name":"aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071025","terms_by_termid":{"GO:0033621":null,"GO:0071025":null,"GO:0071027":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071035":null,"GO:0071036":null,"GO:0071037":null,"GO:0071038":null,"GO:0071039":null,"GO:0071040":null,"GO:0120271":null,"GO:0120272":null,"GO:0180036":null,"GO:0180037":null}}


id: PBO:0067545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 691, pseudogene","termid":"PBO:0067545"}


id: GO:0045581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"negatively_regulates","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell differentiation","synonyms":[{"name":"down regulation of T cell differentiation","type":"exact"},{"name":"down-regulation of T cell differentiation","type":"exact"},{"name":"downregulation of T cell differentiation","type":"exact"},{"name":"inhibition of T cell differentiation","type":"narrow"},{"name":"negative regulation of T cell development","type":"related"},{"name":"negative regulation of T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of T-cell differentiation","type":"exact"},{"name":"negative regulation of T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045581"}


id: PBO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4 (predicted)","termid":"PBO:0002271"}


id: PBO:0059000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated B","termid":"PBO:0059000"}


id: PBO:0113383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein, involved in salt tolerance; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YMR253C is not an essential gene","termid":"PBO:0113383"}


id: PBO:0065396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 2 pseudogene 2","termid":"PBO:0065396"}


id: GO:0061526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"acetylcholine secretion","termid":"GO:0061526"}


id: GO:0055006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac cell over time, from its formation to the mature state. A cardiac cell is a cell that will form part of the cardiac organ of an individual.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac cell development","synonyms":[{"name":"cardiocyte development","type":"exact"},{"name":"heart cell development","type":"related"}],"termid":"GO:0055006"}


id: PATO:0001387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An aneuploidy quality inhering in a bearer by virtue of the bearer's containing only two chromosome from a pair in a cell's nucleus.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Disomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"PATO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disomy","termid":"PATO:0001387"}


id: PBO:0090695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp14","termid":"PBO:0090695"}


id: PBO:0036098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K36_methylation_during_vegetative_growth","termid":"PBO:0036098"}


id: GO:0060523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth process in which solid chords of prostate epithelium increase in length.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"is_a","term_name":"prostate gland morphogenetic growth","termid":"GO:0060737"},{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"},{"relation_name":"part_of","term_name":"branching involved in prostate gland morphogenesis","termid":"GO:0060442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate epithelial cord elongation","termid":"GO:0060523"}


id: GO:0102932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + (-)-medicarpin + NADPH = (+)-vestitol + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pterocarpan reductase activity (obsolete GO:0102932)","termid":"GO:0102932"}


id: GO:0061364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The apoptotic process that contributes to luteolysis.","definition_xrefs":["PMID:18566128","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"luteolysis","termid":"GO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in luteolysis","synonyms":[{"name":"apoptosis involved in luteolysis","type":"narrow"},{"name":"structural luteolysis","type":"exact"}],"termid":"GO:0061364"}


id: GO:1903319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein maturation.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"positively_regulates","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of protein maturation","synonyms":[{"name":"activation of protein maturation","type":"narrow"},{"name":"up regulation of protein maturation","type":"exact"},{"name":"up-regulation of protein maturation","type":"exact"},{"name":"upregulation of protein maturation","type":"exact"}],"termid":"GO:1903319"}


id: MONDO:0007414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gorham-Stout disease (GSD) is a rare disease of massive osteolysis associated with proliferation and dilation of lymphatic vessels. GSD may affect any bone in the body and can be monostotic or polyostotic. Symptoms at presentation are dependent upon the location(s) of the disease; the most common symptom is localized pain. The disease may be discovered after a pathological fracture.","definition_xrefs":["Orphanet:73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"},{"relation_name":"is_a","term_name":"disappearing bone disease","termid":"MONDO:0003157"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Gorham-Stout disease","secondary_identifiers":["UMLS:C0029438","SCTID:1515008","NANDO:1200878","icd11.foundation:1318015458","MedDRA:10071283","ICD9:733.99","NANDO:1200880","NORD:1200","MEDGEN:45248","OMIM:123880","GARD:6542"],"synonyms":[{"name":"Gorham disease","type":"exact"},{"name":"Gorham syndrome","type":"exact"},{"name":"Gorham-Stout disease","type":"exact"},{"name":"cystic angiomatosis of bone diffuse","type":"related"},{"name":"cystic angiomatosis of bone, diffuse","type":"related"},{"name":"idiopathic massive osteolysis","type":"exact"},{"name":"osteolysis massive","type":"related"},{"name":"osteolysis, massive","type":"related"},{"name":"progressive massive osteolysis","type":"exact"},{"name":"vanishing bone disease","type":"exact"}],"termid":"MONDO:0007414","xrefs":{"Monarch":{"xref_id":"0007414"}}}


id: PBO:0031802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition","termid":"PBO:0031802"}


id: MONDO:0015153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal monosomy (obsolete MONDO:0015153)","secondary_identifiers":["ICD10CM:Q93.3","Orphanet:102020"],"synonyms":[{"name":"autosomal deletion","type":"exact"}],"termid":"MONDO:0015153","xrefs":{"Monarch":{"xref_id":"0015153"}}}


id: GO:0007620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The act of sexual union between male and female, involving the transfer of sperm.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"copulation","termid":"GO:0007620"}


id: GO:0020027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hemoglobin, including its uptake and utilization.","definition_xrefs":["GOC:go_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemoglobin metabolic process","synonyms":[{"name":"haemoglobin metabolic process","type":"exact"},{"name":"haemoglobin metabolism","type":"exact"},{"name":"hemoglobin metabolism","type":"exact"}],"termid":"GO:0020027"}


id: FYPO:0004389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid catabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid catabolism RNAs are transcribed from genes whose products are involved in amino acid catabolism.","definition_xrefs":["PMID:23695302","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of amino acid metabolism gene mRNA during vegetative growth","termid":"FYPO:0002743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased level of amino acid catabolism gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid catabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid catabolism gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid catabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid catabolism gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0004389"}


id: MONDO:0019967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kienbock disease is a rare bone disorder of unknown etiology characterized clinically by osteonecrosis of the carpal lunate, eventually leading to collapse of the lunate bone impacting wrist function.","definition_xrefs":["Orphanet:97332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kienbock disease","secondary_identifiers":["MedDRA:10064242","MEDGEN:44028","NORD:1332","GARD:9690","UMLS:C0022682"],"synonyms":[{"name":"Kienbock's disease","type":"related"},{"name":"Kienböck Disease","type":"exact"},{"name":"Lunatomalacia","type":"exact"},{"name":"Osteochondrosis of the lunate bone","type":"exact"},{"name":"aseptic necrosis of the lunate bone","type":"exact"},{"name":"bilateral Kienbock's disease","type":"related"},{"name":"osteochondritis of the lunate bone","type":"exact"}],"termid":"MONDO:0019967","xrefs":{"Monarch":{"xref_id":"0019967"}}}


id: FYPO:0006401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more 2'-deoxyribonucleoside triphosphates (dNTPs) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular dNTP level","synonyms":[{"name":"decreased cellular dNTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dNTP level during vegetative growth","type":"exact"},{"name":"decreased dNTP accumulation","type":"related"},{"name":"reduced cellular dNTP level","type":"exact"}],"termid":"FYPO:0006401"}


id: MONDO:0008498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strabismus, susceptibility to","secondary_identifiers":["MEDGEN:350026","OMIM:185100","UMLS:C1861449"],"synonyms":[{"name":"strabismus, susceptibility to","type":"exact"},{"name":"strabismus, susceptibility to, 1","type":"related"}],"termid":"MONDO:0008498","xrefs":{"Monarch":{"xref_id":"0008498"}}}


id: GO:1903055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:rl","GO_REF:0000058","GOC:TermGenie","PMID:22357537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"positively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix organization","synonyms":[{"name":"activation of extracellular matrix organisation","type":"narrow"},{"name":"activation of extracellular matrix organization","type":"narrow"},{"name":"activation of extracellular matrix organization and biogenesis","type":"related"},{"name":"positive regulation of extracellular matrix organisation","type":"exact"},{"name":"positive regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up regulation of extracellular matrix organisation","type":"exact"},{"name":"up regulation of extracellular matrix organization","type":"exact"},{"name":"up regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up-regulation of extracellular matrix organisation","type":"exact"},{"name":"up-regulation of extracellular matrix organization","type":"exact"},{"name":"up-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"upregulation of extracellular matrix organisation","type":"exact"},{"name":"upregulation of extracellular matrix organization","type":"exact"},{"name":"upregulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903055"}


id: MONDO:0019607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unspecified juvenile idiopathic arthritis is a rare, pediatric, rheumatologic disease, a subtype of juvenile idiopathic arthritis (JIA) characterized by arthritis of an unknown cause that persists for at least 6 weeks, and does not fulfill the criteria for any of the other JIA subtypes, or fulfills criteria for more than one of the other subtypes.","definition_xrefs":["Orphanet:91140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unspecified juvenile idiopathic arthritis","secondary_identifiers":["NANDO:2201061","UMLS:C5680196","MEDGEN:1842681","EFO:0009734","GARD:19155"],"synonyms":[{"name":"unspecified JIA","type":"exact"}],"termid":"MONDO:0019607","xrefs":{"Monarch":{"xref_id":"0019607"}}}


id: MONDO:0060761
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86171],"is_not":false,"summary":null,"term":"MONDO:0060761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with epilepsy and hypoplasia of the corpus callosum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748137","OMIM:618090","MEDGEN:1648487"],"synonyms":[{"name":"NEDEHCC","type":"related"},{"name":"neurodevelopmental disorder with epilepsy and hypoplasia of the corpus callosum","type":"exact"}],"termid":"MONDO:0060761","terms_by_termid":{"MONDO:0060761":null},"xrefs":{"Monarch":{"xref_id":"0060761"}}}


id: PBO:0084705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial hsp70-type molecular chaperone; required for assembly of iron/sulfur clusters into proteins at a step after cluster synthesis; involved in maturation of Grx5p and Yfh1p, which is a homolog of human frataxin implicated in Friedreich's ataxia","termid":"PBO:0084705"}


id: GO:0097242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amyloid-beta is removed from extracellular brain regions by mechanisms involving cell surface receptors.","definition_xrefs":["GOC:bc","PMID:18289866","GOC:BHF","PMID:19098903","GOC:aruk","PMID:26005850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta clearance","synonyms":[{"name":"beta-amyloid clearance","type":"exact"}],"termid":"GO:0097242"}


id: PBO:0071064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 66","termid":"PBO:0071064"}


id: GO:0006883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of sodium ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"sodium ion homeostasis","termid":"GO:0055078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular sodium ion homeostasis","synonyms":[{"name":"cellular sodium ion homeostasis","type":"exact"}],"termid":"GO:0006883"}


id: GO:0071859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide F receptor.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"neuropeptide F receptor binding","termid":"GO:0071859"}


id: MONDO:0007700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hawkinsinuria is an inborn error of tyrosine metabolism characterized by failure to thrive, persistent metabolic acidosis, fine and sparse hair, and excretion of the unusual cyclic amino acid metabolite, hawkinsin ((2-l-cystein-S-yl, 4-dihydroxycyclohex-5-en-1-yl)acetic acid), in the urine.","definition_xrefs":["Orphanet:2118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hawkinsinuria","secondary_identifiers":["SCTID:414380008","OMIM:140350","MEDGEN:419319","DOID:0111362","MESH:C535845","UMLS:C2931042","GARD:5668","icd11.foundation:786595759"],"synonyms":[{"name":"4-HPPD deficiency","type":"exact"},{"name":"4-alpha-hydroxyphenylpyruvate hydroxylase deficiency","type":"exact"},{"name":"4-hydroxyphenylpyruvic acid dioxygenase deficiency","type":"exact"},{"name":"hawkinsinuria","type":"exact"}],"termid":"MONDO:0007700","xrefs":{"Monarch":{"xref_id":"0007700"}}}


id: FYPO:0001928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal regulation of mitotic cell cycle","synonyms":[{"name":"normal cell cycle regulation during vegetative growth","type":"exact"},{"name":"normal regulation of mitotic cell cycle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001928"}


id: PBO:0038402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables_subfunction","termid":"PBO:0038402"}


id: GO:0097645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to amylin.","definition_xrefs":["PMID:18687416","GOC:bhm","PMID:10871296","PMID:12037140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"amylin binding","termid":"GO:0097645"}


id: GO:0004422
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75167],"is_not":false,"summary":null,"term":"GO:0004422"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["RHEA:17973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine phosphoribosyltransferase activity","termid":"GO:0106130"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01132","MetaCyc:HYPOXANPRIBOSYLTRAN-RXN"],"synonyms":[{"name":"6-hydroxypurine phosphoribosyltransferase activity","type":"related"},{"name":"6-mercaptopurine phosphoribosyltransferase activity","type":"related"},{"name":"HGPRTase activity","type":"related"},{"name":"HPRT","type":"related"},{"name":"IMP diphosphorylase activity","type":"related"},{"name":"IMP pyrophosphorylase activity","type":"related"},{"name":"IMP-GMP pyrophosphorylase activity","type":"related"},{"name":"IMP:diphosphate phospho-D-ribosyltransferase activity","type":"related"},{"name":"Transphosphoribosidase activity","type":"broad"},{"name":"guanine-hypoxanthine phosphoribosyltransferase activity","type":"broad"},{"name":"hypoxanthine-guanine phosphoribosyltransferase activity","type":"broad"},{"name":"inosinate pyrophosphorylase activity","type":"related"},{"name":"inosine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"inosinic acid pyrophosphorylase activity","type":"related"},{"name":"inosinic pyrophosphorylase activity","type":"related"},{"name":"purine-6-thiol phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0004422","terms_by_termid":{"GO:0004422":null}}


id: MONDO:0006604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic erythematous skin disorder that affects the face. It is characterized by the development of redness in the cheeks, nose, and/or forehead and telangiectasia. Sometimes, the erythematous changes may involve the eyelids.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"rosacea","secondary_identifiers":["SCTID:398909004","MEDGEN:11269","ICD9:695.3","DOID:8881","MESH:D012393","NCIT:C97136","ICD10CM:L71","UMLS:C0035854","icd11.foundation:134161404","Wikipedia:Rosacea","EFO:1000760"],"synonyms":[{"name":"acne rosacea","type":"exact"},{"name":"acne roscea","type":"exact"},{"name":"acne, erythematosa","type":"exact"}],"termid":"MONDO:0006604","xrefs":{"Monarch":{"xref_id":"0006604"}}}


id: PBO:0001686
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Deb1","termid":"PBO:0001686"}


id: GO:0005966
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the hydrolysis of bonds in a cyclic nucleotide.","definition_xrefs":["EC:3.1.4.-"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclic-nucleotide phosphodiesterase complex (obsolete GO:0005966)","synonyms":[{"name":"photoreceptor cyclic-nucleotide phosphodiesterase complex","type":"narrow"}],"termid":"GO:0005966"}


id: PBO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 4","termid":"PBO:0052531"}


id: PBO:0066354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1 pseudogene 2","termid":"PBO:0066354"}


id: PBO:0071298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 21","termid":"PBO:0071298"}


id: PBO:0061174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 4-1","termid":"PBO:0061174"}


id: GO:1900753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a doxorubicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:19651502","PMID:9651400","PMID:15090538","GOC:TermGenie","PMID:19063901","PMID:12057006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"doxorubicin transport","synonyms":[{"name":"(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"exact"},{"name":"(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"related"},{"name":"(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione transport","type":"related"},{"name":"14-hydroxydaunomycin transport","type":"related"},{"name":"14-hydroxydaunorubicine transport","type":"related"},{"name":"Adriamycin transport","type":"related"},{"name":"doxorubicine transport","type":"related"},{"name":"doxorubicinum transport","type":"related"}],"termid":"GO:1900753"}


id: GO:0060980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form the blood vessels of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in vasculogenesis","termid":"GO:0035441"},{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"vasculogenesis involved in coronary vascular morphogenesis","termid":"GO:0060979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in coronary vasculogenesis","termid":"GO:0060980"}


id: MONDO:0009352
data:
  {"annotated_genes":["SJAG_00582","SJAG_01880"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85081,85082],"is_not":false,"summary":null,"term":"MONDO:0009352"}]},"cv_name":"mondo","definition":"Classical homocystinuria due to cystathionine beta-synthase (CbS) deficiency is characterized by the multiple involvement of the eye, skeleton, central nervous system, and vascular system.","definition_xrefs":["Orphanet:394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"},{"relation_name":"is_a","term_name":"homocystinuria","termid":"MONDO:0004737"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_01880":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"classic homocystinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6667","MedDRA:10071093","NANDO:1201039","NORD:1249","OMIM:236200","SCTID:24308003","UMLS:C0751202","MEDGEN:199606"],"synonyms":[{"name":"CBS deficiency","type":"related"},{"name":"Homocystinuria due to Cystathionine Beta-Synthase Deficiency","type":"exact"},{"name":"classic homocystinuria","type":"exact"},{"name":"cystathionine beta-synthase deficiency","type":"exact"},{"name":"homocystinuria due to CBS deficiency","type":"related"},{"name":"homocystinuria due to cystathionine beta-synthase deficiency","type":"exact"},{"name":"homocystinuria with or without response to pyridoxine","type":"related"},{"name":"homocystinuria, B6-responsive and nonresponsive types","type":"exact"},{"name":"hyperhomocysteinemia, thrombotic, CBS-related","type":"related"},{"name":"thrombosis, hyperhomocysteinemic","type":"exact"}],"termid":"MONDO:0009352","terms_by_termid":{"MONDO:0009352":null},"xrefs":{"Monarch":{"xref_id":"0009352"}}}


id: MOD:00446
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of a residue with 4-hydroxynonenal.","definition_xrefs":["Unimod:53","PubMed:11327326","PubMed:15133838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:00446"}


id: MONDO:0002935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal cell carcinoma of the penis with an indolent clinical course. It is usually superficial and arises from the shaft and rarely the glans.","definition_xrefs":["NCIT:C39961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"penis basal cell carcinoma","secondary_identifiers":["MEDGEN:275349","UMLS:C1518949","DOID:4277"],"synonyms":[{"name":"basal cell carcinoma of the penis","type":"exact"},{"name":"penile basal cell cancer","type":"exact"},{"name":"penile basal cell carcinoma","type":"exact"},{"name":"penis skin basal cell carcinoma","type":"exact"},{"name":"skin basal cell carcinoma of penis","type":"exact"},{"name":"skin of penis skin basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002935","xrefs":{"Monarch":{"xref_id":"0002935"}}}


id: PBO:0013785
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli MutY","termid":"PBO:0013785"}


id: GO:0022022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of septal cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septal cell proliferation","synonyms":[{"name":"septum cell proliferation","type":"exact"}],"termid":"GO:0022022"}


id: GO:0004586
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75334],"is_not":false,"summary":null,"term":"GO:0004586"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine + H+ = CO2 + putrescine.","definition_xrefs":["EC:4.1.1.17","RHEA:22964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ornithine decarboxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00670","MetaCyc:ORNDECARBOX-RXN","Reactome:R-HSA-70692"],"synonyms":[{"name":"L-ornithine carboxy-lyase (putrescine-forming)","type":"related"},{"name":"L-ornithine carboxy-lyase activity","type":"narrow"},{"name":"SpeC","type":"related"}],"termid":"GO:0004586","terms_by_termid":{"GO:0004586":null}}


id: MONDO:1011553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Legg-Calvé-Perthes disease that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Legg-Calvé-Perthes disease, non-human animal","termid":"MONDO:1011453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calvé-Perthes disease, Rhesus monkey","secondary_identifiers":["OMIA:000586-9544"],"termid":"MONDO:1011553","xrefs":{"Monarch":{"xref_id":"1011553"}}}


id: PBO:0058768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6892","termid":"PBO:0058768"}


id: GO:0090732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure consisting of parallel, hexagonally arranged actin tubules, comprising filamentous actin and disulfide cross-linked cofilin multimers.","definition_xrefs":["PMID:22573689","PMID:24760020","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin rod","termid":"GO:0031002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"cofilin-actin rod","termid":"GO:0090732"}


id: PBO:0036548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Bmt5 (predicted)","termid":"PBO:0036548"}


id: MOD:00504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine.","definition_xrefs":["OMSSA:79","PubMed:1326520","PubMed:1386601","PubMed:11955007","PubMed:6436247","PubMed:7543369","Unimod:135#G","PubMed:11955008","RESID:AA0059#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine","synonyms":[{"name":"(cis,cis-delta 5, delta 8)-tetradecadienoyl","type":"related"},{"name":"Myristoyl+Delta:H(-4)","type":"related"},{"name":"N-(C14:2 aliphatic acyl)glycine","type":"exact"},{"name":"myristoylation-4H (two double bonds)","type":"exact"},{"name":"ntermpepmyristoyl4hg","type":"exact"}],"termid":"MOD:00504"}


id: PBO:0109407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U2 snRNA-specific guide RNA","termid":"PBO:0109407"}


id: PBO:0078691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-4","termid":"PBO:0078691"}


id: GO:0035517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric protein complex that removes monoubiquitin from histone H2A. In Drosophila and mammals, the core of the complex is composed of Calypso/BAP1 and Asx/ASXL1, respectively.","definition_xrefs":["PMID:20436459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PcG protein complex","termid":"GO:0031519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PR-DUB complex","synonyms":[{"name":"Polycomb repressive deubiquitinase complex","type":"exact"}],"termid":"GO:0035517"}


id: PBO:0033811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_S_phase_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033811"}


id: PBO:0066979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 282","termid":"PBO:0066979"}


id: PBO:0056581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCTS family member 2","termid":"PBO:0056581"}


id: PBO:0061798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase pseudogene","termid":"PBO:0061798"}


id: GO:0014732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in skeletal muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle atrophy","termid":"GO:0014891"},{"relation_name":"is_a","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle atrophy","termid":"GO:0014732"}


id: MONDO:0007778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A condition in which there is an abnormally increased distance between two organs or bodily parts; most often, this term is referring to an increased distance between the orbits (orbital hypertelorism).","definition_xrefs":["NCIT:C34715"],"gene_count":0,"genotype_count":0,"name":"obsolete hypertelorism (obsolete MONDO:0007778)","secondary_identifiers":["SCTID:22006008","MESH:D006972","HP:0000316","ICD9:376.41","OMIM:145400"],"synonyms":[{"name":"hypertelorism","type":"exact"},{"name":"hypertelorism of orbit","type":"exact"},{"name":"obsolete hypertelorism (disease)","type":"exact"}],"termid":"MONDO:0007778","xrefs":{"Monarch":{"xref_id":"0007778"}}}


id: FYPO:0002078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium during a cellular hypotonic response. Cells stop growing (and may die) at a concentration of calcium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to calcium","termid":"FYPO:0000098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to calcium during cellular hypotonic response","synonyms":[{"name":"hypersensitive to calcium during cellular hypotonic response","type":"exact"},{"name":"sensitive to calcium during cellular hypoosmotic response","type":"exact"},{"name":"sensitive to calcium during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"sensitive to calcium ions during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002078"}


id: PBO:0088914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37","termid":"PBO:0088914"}


id: PBO:0071611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 29","termid":"PBO:0071611"}


id: FYPO:0002162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cilofungin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cilofungin","synonyms":[{"name":"resistance to cilofungin during mitotic cell cycle","type":"related"},{"name":"resistance to cilofungin during vegetative growth","type":"exact"},{"name":"resistant to cilofungin","type":"exact"}],"termid":"FYPO:0002162"}


id: MONDO:0014225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary hemochromatosis in which the cause of the disease is a mutation in the FTH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemochromatosis","termid":"MONDO:0006507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemochromatosis type 5","secondary_identifiers":["OMIM:615517","MESH:C565020","Orphanet:247790","UMLS:C1851316","MEDGEN:341982","GARD:13472","Orphanet:447792","DOID:0111031"],"synonyms":[{"name":"FTH1 hereditary hemochromatosis","type":"exact"},{"name":"FTH1-associated iron overload","type":"exact"},{"name":"FTH1-related iron overload","type":"exact"},{"name":"HFE5","type":"exact"},{"name":"hemochromatosis, type 5","type":"related"},{"name":"hereditary hemochromatosis caused by mutation in FTH1","type":"exact"},{"name":"iron overload, autosomal dominant","type":"related"}],"termid":"MONDO:0014225","xrefs":{"Monarch":{"xref_id":"0014225"}}}


id: PBO:0045607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 18 (pseudogene)","termid":"PBO:0045607"}


id: MONDO:0957113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic calcium channel defect","secondary_identifiers":["UMLS:C5681686","GARD:19565","MEDGEN:1842522","Orphanet:98740"],"termid":"MONDO:0957113","xrefs":{"Monarch":{"xref_id":"0957113"}}}


id: PR:O74815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.04","synonyms":[{"name":"Spom972h-ppk27","type":"exact"}],"termid":"PR:O74815"}


id: GO:0052770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme F390-A = AMP + coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:8536708","PMID:9352911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coenzyme F390-A hydrolase activity","synonyms":[{"name":"8-hydroxyadenylylated-coenzyme F420 hydrolase activity","type":"exact"}],"termid":"GO:0052770"}


id: PBO:0082860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of TRAPP complexes I, II and IV; transport protein particle (TRAPP) complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII, and IV); proposed subunit of a novel complex, TRAPPIV, that may function redundantly with TRAPPIII as a GEF that activates Ypt1 during autophagy","termid":"PBO:0082860"}


id: PBO:0004422
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates eng1 target genes","termid":"PBO:0004422"}


id: GO:0061248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric glomerulus vasculature are generated and organized. The mesonephric glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the mesonephric glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus vasculature morphogenesis","termid":"GO:0072103"},{"relation_name":"part_of","term_name":"mesonephric glomerulus vasculature development","termid":"GO:0061231"},{"relation_name":"part_of","term_name":"mesonephric glomerulus morphogenesis","termid":"GO:0061234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerulus vasculature morphogenesis","termid":"GO:0061248"}


id: FYPO:0000540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein transport","termid":"FYPO:0005744"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein transport during vegetative growth","synonyms":[{"name":"abnormal protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport: abnormal","type":"related"}],"termid":"FYPO:0000540"}


id: GO:0010492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of shoot apical meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["PMID:17461786","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of shoot apical meristem identity","termid":"GO:0010492"}


id: PBO:0054803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2216","termid":"PBO:0054803"}


id: GO:1901978
data:
  {"annotated_genes":["SJAG_01837","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[116484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","PMID:23028116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001052"],"synonyms":[{"name":"activation of cell cycle checkpoint","type":"narrow"},{"name":"positive regulation of G1/S checkpoint","type":"related"},{"name":"positive regulation of G1/S transition checkpoint","type":"related"},{"name":"up regulation of cell cycle checkpoint","type":"exact"},{"name":"up-regulation of cell cycle checkpoint","type":"exact"},{"name":"upregulation of cell cycle checkpoint","type":"exact"}],"termid":"GO:1901978","terms_by_termid":{"GO:0090267":null,"GO:1905326":null}}


id: PR:000050456
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Thr-45, Thr-50, Thr-171, Thr-177, Ser-278, and Ser-286 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-45/Thr-50/Thr-171/Thr-177/Ser-278/Ser-286, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:31911490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/UnPhos:(T45,T50,T171,T177,S278,S286)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: RNA-binding protein rnc1 unphosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rnc1/UnPhos:2","type":"exact"},{"name":"UniProtKB:O74919, Thr-45/Thr-50/Thr-171/Thr-177/Ser-278/Ser-286, PR:000026291","type":"narrow"},{"name":"rnc1/UnPhos:(T45,T50,T171,T177,S278,S286)","type":"exact"}],"termid":"PR:000050456"}


id: PR:Q9UUF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome biogenesis factor 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23350:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome biogenesis factor 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.10","secondary_identifiers":["UniProtKB:Q9UUF0"],"synonyms":[{"name":"Spom972h-PEX10","type":"exact"},{"name":"peroxin-10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisomal biogenesis factor 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisome assembly protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi036","type":"related"}],"termid":"PR:Q9UUF0"}


id: PBO:0087242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protease of SPS plasma membrane amino acid sensor system; contains an inhibitory domain that dissociates in response to extracellular amino acids, freeing a catalytic domain to activate transcription factor Stp1p; other members are Ssy1p and Ptr3p","termid":"PBO:0087242"}


id: PBO:0087749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the THO complex; THO is required for efficient transcription elongation and involved in transcriptional elongation-associated recombination; required for LacZ RNA expression from certain plasmids","termid":"PBO:0087749"}


id: PBO:0083631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain-containing protein; involved in regulating phosphatidylinositol 4,5-bisphosphate levels and autophagy; Irs4p and Tax4p bind and activate the PtdIns phosphatase Inp51p; Irs4p and Tax4p are involved in localizing Atg17p to the PAS; TAX4 has a paralog, IRS4, that arose from the whole genome duplication","termid":"PBO:0083631"}


id: GO:0075012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of germ tube formation on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of germ tube formation","termid":"GO:0075010"},{"relation_name":"negatively_regulates","term_name":"germ tube formation","termid":"GO:0075009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germ tube formation","synonyms":[{"name":"negative regulation of germ tube formation on or near host","type":"exact"}],"termid":"GO:0075012"}


