# terms

id: PBO:0087949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4G and scaffold protein; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E (Cdc33p) and eIF4A (Tif1p/Tif2p); proposed to stimulate the ATPase and helicase activities of eIF4A synergistically with eIF4G based on sequence similarity with Tif4631p; proposed to be required with eIF4E for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; associated with Pab1p-mediated poly(A)-tail stimulated, translation","termid":"PBO:0087949"}


id: PBO:0044547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein 3 pseudogene 1","termid":"PBO:0044547"}


id: GO:2000081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway modulating the rate or frequency of pancreatic B cell proliferation.","definition_xrefs":["GOC:obol","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in controlling type B pancreatic cell proliferation (obsolete GO:2000081)","synonyms":[{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in pancreatic beta cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in controlling pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in controlling type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:2000081"}


id: GO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylamine (CH3NH2).","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylamine metabolic process","synonyms":[{"name":"methylamine metabolism","type":"exact"},{"name":"methylammonium metabolic process","type":"exact"},{"name":"methylammonium metabolism","type":"exact"}],"termid":"GO:0030416"}


id: MOD:00271
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, the C-3' of a tyrosine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0266","PubMed:8325841","PubMed:9095195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-tyrosine residue","termid":"MOD:02075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-tyrosine","synonyms":[{"name":"(10S,11S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-10-(2-hydroxy-5-[(S)-2-amino-2-carboxy]ethylphenyl)-3,8,13,17-tetramethyl-21H,23H-10,11-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-(tyros-3'-yl)-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-tyrosine","type":"exact"}],"termid":"MOD:00271"}


id: PBO:0061622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 6","termid":"PBO:0061622"}


id: MONDO:0006109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from mesothelial cells in the pleura. It is characterized by the presence of neoplastic epithelioid cells and sarcomatoid features.","definition_xrefs":["NCIT:C4282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant biphasic mesothelioma","secondary_identifiers":["EFO:1000124","ICDO:9053/3","MEDGEN:137775","DOID:4486","UMLS:C0334515"],"synonyms":[{"name":"biphasic mesothelioma","type":"exact"},{"name":"malignant biphasic mesothelioma","type":"exact"},{"name":"malignant biphasic mesothelioma, malignant","type":"exact"},{"name":"malignant mixed mesothelioma","type":"exact"},{"name":"mesothelioma, biphasic, malignant","type":"exact"},{"name":"mesothelioma, biphasic, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed mesothelioma","type":"exact"}],"termid":"MONDO:0006109","xrefs":{"Monarch":{"xref_id":"0006109"}}}


id: GO:0010283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pinoresinol + NADPH + H+ = lariciresinol + NADP+.","definition_xrefs":["PMID:10066819","PMID:7592828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pinoresinol reductase activity","termid":"GO:0010283"}


id: PBO:0042355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD99 molecule (Xg blood group)","termid":"PBO:0042355"}


id: MOD:01261
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:270#C","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site S","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01261"}


id: PBO:0011450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.55","termid":"PBO:0011450"}


id: GO:0071384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosteroid hormone stimulus. A corticosteroid is a steroid hormone that is produced in the adrenal cortex. Corticosteroids are involved in a wide range of physiologic systems such as stress response, immune response and regulation of inflammation, carbohydrate metabolism, protein catabolism, blood electrolyte levels, and behavior. They include glucocorticoids and mineralocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticosteroid","termid":"GO:0031960"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}


id: MONDO:0044964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma arising from the minor salivary glands in the oral cavity. It is often asymptomatic and detected during a routine dental examination.","definition_xrefs":["NCIT:C8177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"oral cavity mucoepidermoid carcinoma","secondary_identifiers":["UMLS:C0280309","MEDGEN:83629"],"synonyms":[{"name":"mucoepidermoid carcinoma of oral cavity","type":"exact"},{"name":"mucoepidermoid carcinoma of the oral cavity","type":"exact"},{"name":"oral cavity mucoepidermoid cancer","type":"exact"},{"name":"oral cavity mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0044964","xrefs":{"Monarch":{"xref_id":"0044964"}}}


id: MONDO:0100019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paroxysmal dyskinesia which manifest as dystonic movements brought on by sustained exercise, that is correlated with a deficiency in the gene ECHS1 (caused by a missence mutation). Onset is typically between age two and four years.","definition_xrefs":["PMID:28039521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia","termid":"MONDO:0015427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"ECHS1-related paroxysmal dyskinesia","synonyms":[{"name":"ECHS1 deficiency-associated paroxysmal exercise-induced dyskinesia","type":"exact"}],"termid":"MONDO:0100019","xrefs":{"Monarch":{"xref_id":"0100019"}}}


id: PBO:0087485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); a complex required for loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during DSB repair via histone H2AX; promotes gene expression program that supports translational fidelity; evolutionarily-conserved adherin; relocalizes to cytosol in response to hypoxia; human disorder Cornelia de Lange syndrome is caused by mutations in NIPBL, the human ortholog of SCC2; conserved role in NHEJ","termid":"PBO:0087485"}


id: PBO:0004615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg8","termid":"PBO:0004615"}


id: PBO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_vegetative_cell,_single_septa_between_nuclei","termid":"PBO:0030366"}


id: PBO:0017910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Mis13","termid":"PBO:0017910"}


id: PBO:0043599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXVIII alpha 1 chain","termid":"PBO:0043599"}


id: GO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a sodium ion through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:BHF","GOC:pr","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sodium channel activity","secondary_identifiers":["Reactome:R-HSA-9717395","Reactome:R-HSA-9717396","Reactome:R-HSA-3295580","Reactome:R-HSA-9717374","Reactome:R-HSA-9717382","Reactome:R-HSA-2730664"],"termid":"GO:0005272"}


id: MONDO:0007628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any foveal hypoplasia in which the cause of the disease is a mutation in the PAX6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foveal hypoplasia","termid":"MONDO:0044203"},{"relation_name":"is_a","term_name":"PAX6-related ocular dysgenesis","termid":"MONDO:0800183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"foveal hypoplasia 1","secondary_identifiers":["OMIM:136520","UMLS:C3805604","DOID:0070530","MEDGEN:811934"],"synonyms":[{"name":"FVH1","type":"related"},{"name":"O Donnell Pappas syndrome","type":"related"},{"name":"PAX6 foveal hypoplasia","type":"exact"},{"name":"foveal hypoplasia 1","type":"exact"},{"name":"foveal hypoplasia 1 with or without anterior segment anomalies and/or cataract","type":"related"},{"name":"foveal hypoplasia caused by mutation in PAX6","type":"exact"},{"name":"foveal hypoplasia type 1","type":"exact"},{"name":"foveal hypoplasia, congenital nystagmus, corneal pannus, and presenile cataracts","type":"related"},{"name":"foveal hypoplasia, presenile cataract","type":"related"}],"termid":"MONDO:0007628","xrefs":{"Monarch":{"xref_id":"0007628"}}}


id: PR:Q09837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00306","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.12c","secondary_identifiers":["UniProtKB:Q09837"],"synonyms":[{"name":"GPI mannosyltransferase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGZ","type":"exact"}],"termid":"PR:Q09837"}


id: MONDO:0011250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, macrotia, and intellectual disability","secondary_identifiers":["OMIM:602555","MESH:C566525","UMLS:C1865204","MEDGEN:355403"],"synonyms":[{"name":"microcephaly, macrotia, and intellectual disability","type":"exact"},{"name":"microcephaly, macrotia, and mental retardation","type":"exact"}],"termid":"MONDO:0011250","xrefs":{"Monarch":{"xref_id":"0011250"}}}


id: PBO:0090813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase [glutamine-hydrolyzing] Gua2","termid":"PBO:0090813"}


id: GO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the amine 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine, a serotonin receptor agonist that can act as a psychedelic drug.","definition_xrefs":["GOC:yaf","PMID:19057895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding","synonyms":[{"name":"(+/-)2-(4-iodo-2,5-dimethoxy-phenyl)-1-methyl-ethylamine binding","type":"exact"},{"name":"1-(4-iodo-2,5-dimethoxyphenyl)-2-aminopropane binding","type":"exact"},{"name":"4-iodo-2,5-dimethoxyphenylisopropylamine binding","type":"exact"}],"termid":"GO:0071886"}


id: PBO:0035745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_absent_from_cell","termid":"PBO:0035745"}


id: FYPO:0002764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which tRNA (guanine(9)-N(1))-methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished tRNA methyltransferase activity","termid":"FYPO:0001773"},{"relation_name":"is_a","term_name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished tRNA (guanine(9)-N(1))-methyltransferase activity","synonyms":[{"name":"tRNA (guanine(9)-N(1))-methyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0002764"}


id: PBO:0073712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI family transcriptional corepressor 2","termid":"PBO:0073712"}


id: MONDO:0023305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heavy metal poisoning refers to when excessive exposure to a heavy metal affects the normal function of the body. Examples of heavy metals that can cause toxicity include lead, mercury, arsenic, cadmium, and chromium. Exposure may occur through the diet, from medications, from the environment, or in the course of work or play. Heavy metals can enter the body through the skin, or by inhalation or ingestion. Toxicity can result from sudden, severe exposure, or from chronic exposure over time. Symptoms can vary depending on the metal involved, the amount absorbed, and the age of the person exposed. For example, young children are more susceptible to the effects of lead exposure because they absorb more compared with adults and their brains are still developing. Nausea, vomiting, diarrhea, and abdominal pain are common symptoms of acute metal ingestion. Chronic exposure may cause various symptoms resulting from damage to body organs, and may increase the risk of cancer. Treatment depends on the circumstances of the exposure.","definition_xrefs":["GARD:0006577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal poisoning","secondary_identifiers":["NORD:1219","GARD:6577","MESH:D000075322","SCTID:85866007","EFO:1001518","ICD9:985.8"],"synonyms":[{"name":"chronic heavy metal poisoning","type":"related"},{"name":"heavy metal poisoning","type":"exact"},{"name":"heavy metal toxicity","type":"related"},{"name":"heavy metal toxicosis","type":"related"},{"name":"toxic effect of heavy metal","type":"exact"}],"termid":"MONDO:0023305","xrefs":{"Monarch":{"xref_id":"0023305"}}}


id: MONDO:0008156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sclerosing disorder of the skeleton characterized by increased bone density that classically displays the radiographic sign of ''sandwich vertebrae'' (dense bands of sclerosis parallel to the vertebral endplates).","definition_xrefs":["Orphanet:53"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete unclassified primitive or secondary maculopathy (obsolete MONDO:0020244)","termid":"MONDO:0020244"},{"relation_name":"excluded_subClassOf","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"autosomal dominant osteopetrosis","termid":"MONDO:0020645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant osteopetrosis 2","secondary_identifiers":["MEDGEN:465707","GARD:383","OMIM:166600","DOID:0110938","SCTID:725050005","UMLS:C3179239"],"synonyms":[{"name":"Albers-Schonberg disease, autosomal dominant","type":"related"},{"name":"Albers-Schonberg osteopetrosis","type":"exact"},{"name":"Albers-Schönberg osteopetrosis","type":"exact"},{"name":"OPTA2","type":"exact"},{"name":"autosomal dominant Albers-Schonberg disease","type":"exact"},{"name":"autosomal dominant osteopetrosis type 2","type":"exact"},{"name":"autosomal dominant osteopetrosis type II","type":"exact"},{"name":"marble bones, autosomal dominant","type":"related"},{"name":"osteopetrosis autosomal dominant type 2","type":"exact"},{"name":"osteopetrosis, autosomal dominant 2","type":"related"},{"name":"osteopetrosis, autosomal dominant type 2","type":"exact"},{"name":"osteopetrosis, autosomal dominant, type 2","type":"related"},{"name":"osteosclerosis Fragilis generalisata","type":"related"}],"termid":"MONDO:0008156","xrefs":{"Monarch":{"xref_id":"0008156"}}}


id: PBO:0014259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein Scs22","termid":"PBO:0014259"}


id: PBO:0056950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 16-2","termid":"PBO:0056950"}


id: PBO:0062622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily G member 1 pseudogene","termid":"PBO:0062622"}


id: PBO:0058816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7973-2","termid":"PBO:0058816"}


id: PBO:0052843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-3","termid":"PBO:0052843"}


id: GO:0048306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex in the presence of calcium.","definition_xrefs":["PMID:10485905","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent protein binding","termid":"GO:0048306"}


id: PBO:0047931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(11)(p15.1)","termid":"PBO:0047931"}


id: PBO:0031899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane signaling receptor Wsc1 (predicted)","termid":"PBO:0031899"}


id: PATO:0001897
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's having a three dimensional space surrounded by one or more anatomical structures and containing one or more anatomical substances.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumenized","termid":"PATO:0001897"}


id: PBO:0089874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron-specific pre-mRNA splicing-ubiquitin fusion protein Sde2","termid":"PBO:0089874"}


id: MONDO:0004224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic polyneuropathy","termid":"MONDO:0003335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"chronic metabolic polyneuropathy","secondary_identifiers":["UMLS:C1333042","MEDGEN:272482","DOID:7441","NCIT:C35602"],"synonyms":[{"name":"chronic metabolic polyneuropathy","type":"exact"}],"termid":"MONDO:0004224","xrefs":{"Monarch":{"xref_id":"0004224"}}}


id: PBO:0086603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is regulated by Msn2p/Msn4p, indicating a possible role in stress response","termid":"PBO:0086603"}


id: MONDO:0021313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"palpebral epidermal tumor","termid":"MONDO:0020172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"eyelid cancer","secondary_identifiers":["SCTID:423425006","UMLS:C1828015","ICD9:173.1","NCIT:C6786","MEDGEN:501131","Orphanet:98584","SCTID:231829006"],"synonyms":[{"name":"cancer of eyelid","type":"exact"},{"name":"cancer of skin of eyelid","type":"exact"},{"name":"eyelid cancer","type":"exact"},{"name":"malignant eyelid neoplasm","type":"exact"},{"name":"malignant eyelid tumor","type":"exact"},{"name":"malignant eyelid tumour","type":"exact"},{"name":"malignant neoplasm of eyelid","type":"exact"},{"name":"malignant neoplasm of skin of eyelid","type":"exact"},{"name":"malignant neoplasm of the eyelid","type":"exact"},{"name":"malignant skin of eyelid neoplasm","type":"exact"},{"name":"malignant tumor of eyelid","type":"exact"},{"name":"malignant tumor of palpebral epidermis","type":"exact"},{"name":"malignant tumour of the eyelid","type":"exact"},{"name":"skin of eyelid cancer","type":"exact"}],"termid":"MONDO:0021313","xrefs":{"Monarch":{"xref_id":"0021313"}}}


id: PR:Q92344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.06","synonyms":[{"name":"Spom972h-fta5","type":"exact"},{"name":"sim4 complex subunit fta5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92344"}


id: PBO:0079119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor susceptibility 101","termid":"PBO:0079119"}


id: GO:0061829
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Actin-based structures involved in establishing the blood-testis barrier of the Sertoli cell.","definition_xrefs":["PMID:20403871","PMID:22510523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubulobulbar complex","termid":"GO:0036284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"basal tubulobulbar complex","synonyms":[{"name":"basal TBC","type":"exact"}],"termid":"GO:0061829"}


id: MONDO:0044273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertension, diastolic, resistance to (obsolete MONDO:0044273)","secondary_identifiers":["OMIM:608622"],"synonyms":[{"name":"hypertension, diastolic, resistance to","type":"related"}],"termid":"MONDO:0044273","xrefs":{"Monarch":{"xref_id":"0044273"}}}


id: PBO:0065344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2A pseudogene 1","termid":"PBO:0065344"}


id: PBO:0062347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 6","termid":"PBO:0062347"}


id: FYPO:0005747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein transport","termid":"FYPO:0005747"}


id: GO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that links the outer microtubule doublet of a 9+2 type ciliary or flagellar axoneme with the sheath that surrounds the central pair of microtubules. Composed of a stalk that attaches to each doublet microtubule and a globular structure (spoke head) that projects toward the central pair of microtubules.","definition_xrefs":["PMID:9450971","GOC:krc","ISBN:0124325653","PMID:25694453","PMID:22118931","PMID:34871179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"radial spoke","secondary_identifiers":["Wikipedia:Radial_spoke"],"termid":"GO:0001534"}


id: PBO:0084784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial phosphatidate cytidylyltransferase (CDP-DAG synthase); required for cardiolipin biosynthesis; viability of null mutant is strain-dependent; mRNA is targeted to the bud; mutant displays defect in mitochondrial protein import, likely due to altered membrane lipid composition","termid":"PBO:0084784"}


id: SO:1000068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the insertion of two nucleotides.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000068 sequence_variant_causing_plus_2_frameshift (obsolete SO:1000068)","synonyms":[{"name":"plus 2 frameshift mutation","type":"exact"},{"name":"sequence variant causing plus 2 frameshift","type":"exact"}],"termid":"SO:1000068"}


id: internal:alternate
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate","termid":"internal:alternate"}


id: PBO:0082160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenosine 5'-monophosphoramidase; interacts physically and genetically with Kin28p, a CDK and TFIIK subunit, and genetically with CAK1; member of histidine triad (HIT) superfamily of nucleotide-binding proteins; protein abundance increases in response to DNA replication stress; human homolog HINT1 can complement yeast hnt1 mutant","termid":"PBO:0082160"}


id: GO:2000688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000688)","synonyms":[{"name":"positive regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"positive regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"positive regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000688"}


id: MONDO:0012298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele, diaphragmatic hernia, and radial ray defects","secondary_identifiers":["MEDGEN:332105","OMIM:609545","UMLS:C1836007","MESH:C563701"],"synonyms":[{"name":"Gershoni-Baruch syndrome","type":"related"},{"name":"omphalocele, diaphragmatic hernia, and radial ray defects","type":"exact"}],"termid":"MONDO:0012298","xrefs":{"Monarch":{"xref_id":"0012298"}}}


id: PBO:0039736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein E","termid":"PBO:0039736"}


id: GO:0002130
data:
  {"annotated_genes":["SJAG_01269","SJAG_02352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97625,102678],"is_not":false,"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The process in which the ribose base of the nucleotide at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'O position.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA nucleoside ribose methylation","termid":"GO:0002128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_02352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"wobble position ribose methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002130","terms_by_termid":{"GO:0002130":null}}


id: PBO:0076466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWIST1 associated long noncoding RNA regulated by androgen receptor","termid":"PBO:0076466"}


id: GO:0160069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of surfactant by a cell or tissue.","definition_xrefs":["PMID:19824815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"part_of","term_name":"surfactant homeostasis","termid":"GO:0043129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"surfactant secretion","termid":"GO:0160069"}


id: GO:1900857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of fumitremorgin B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fumitremorgin B biosynthetic process (obsolete GO:1900857)","synonyms":[{"name":"up regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"up-regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"upregulation of fumitremorgin B biosynthetic process","type":"exact"}],"termid":"GO:1900857"}


id: PBO:0042730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein I","termid":"PBO:0042730"}


id: MONDO:0006552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the hair follicles. Causes include excessive perspiration, skin infections, and skin wounds.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"folliculitis","secondary_identifiers":["MEDGEN:4752","EFO:1000702","ICD9:704.8","MESH:D005499","NCIT:C94408","SCTID:13600006","Wikipedia:Folliculitis","UMLS:C0016436","DOID:4409"],"synonyms":[{"name":"dermatitis of hair follicle","type":"exact"},{"name":"hair follicle dermatitis","type":"exact"}],"termid":"MONDO:0006552","xrefs":{"Monarch":{"xref_id":"0006552"}}}


id: PBO:0012269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 4 Pre6","termid":"PBO:0012269"}


id: MONDO:0700222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease that occurs as a consequence of immunosuppression in a recipient of a hematopoietic stem cell transplant, or as a consequence of the transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease related to hematopoietic stem cell transplant","termid":"MONDO:0700222","xrefs":{"Monarch":{"xref_id":"0700222"}}}


id: FYPO:0004415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased phosphatase activity","termid":"FYPO:0004415"}


id: GO:1901077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of muscle","termid":"GO:1901077"}


id: MONDO:0004267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign squamous neoplasm characterized by a papillary growth pattern, diffusely involving a specific anatomic site.","definition_xrefs":["NCIT:C9009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillomatosis","termid":"MONDO:0021098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous papillomatosis","secondary_identifiers":["DOID:7532","ICDO:8060/0","UMLS:C1378340","MEDGEN:235130"],"synonyms":[{"name":"squamous papillomatosis","type":"exact"}],"termid":"MONDO:0004267","xrefs":{"Monarch":{"xref_id":"0004267"}}}


id: PBO:0061028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIM1 serine/threonine protein kinase","termid":"PBO:0061028"}


id: MONDO:1011783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha fucosidosis, non-human animal","secondary_identifiers":["OMIA:000396"],"termid":"MONDO:1011783","xrefs":{"Monarch":{"xref_id":"1011783"}}}


id: MONDO:0014124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Adams-Oliver syndrome in which the cause of the disease is a mutation in the EOGT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Adams-Oliver syndrome","termid":"MONDO:0007034"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Adams-Oliver syndrome 4","secondary_identifiers":["OMIM:615297","GARD:15941","MEDGEN:815422","UMLS:C3809092"],"synonyms":[{"name":"AOS4","type":"related"},{"name":"Adams-Oliver syndrome 4","type":"exact"},{"name":"Adams-Oliver syndrome caused by mutation in EOGT","type":"exact"},{"name":"Adams-Oliver syndrome type 4","type":"exact"},{"name":"EOGT Adams-Oliver syndrome","type":"exact"}],"termid":"MONDO:0014124","xrefs":{"Monarch":{"xref_id":"0014124"}}}


id: PBO:0027979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0027979"}


id: MONDO:0013444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the NEK8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 9","secondary_identifiers":["UMLS:C3151188","MEDGEN:462538","DOID:0111120","OMIM:613824"],"synonyms":[{"name":"NEK8 nephronophthisis (disease)","type":"exact"},{"name":"NPHP9","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in NEK8","type":"exact"},{"name":"nephronophthisis 9","type":"exact"},{"name":"nephronophthisis type 9","type":"exact"}],"termid":"MONDO:0013444","xrefs":{"Monarch":{"xref_id":"0013444"}}}


id: PBO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 40","termid":"PBO:0070932"}


id: PBO:0068195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 502","termid":"PBO:0068195"}


id: PBO:0043637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinator of PRMT5 and differentiation stimulator","termid":"PBO:0043637"}


id: FYPO:0000380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished macroautophagy","synonyms":[{"name":"abolished autophagy","type":"broad"},{"name":"absent macroautophagy","type":"exact"},{"name":"autophagy: absent","type":"broad"},{"name":"macroautophagy abolished","type":"exact"}],"termid":"FYPO:0000380"}


id: PBO:0108777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Heat Sensitivity","termid":"PBO:0108777"}


id: MOD:01843
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 5'-chloro-L-tryptophan.","definition_xrefs":["RESID:AA0549","PubMed:18215770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tryptophan","termid":"MOD:01913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-chloro-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(5-chloro-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"5'-chloro-L-tryptophan","type":"exact"},{"name":"MOD_RES 5'-chlorotryptophan","type":"exact"}],"termid":"MOD:01843"}


id: GO:0019886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["ISBN:0781735149","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class II","secondary_identifiers":["GO:0042591","GO:0048005","Reactome:R-HSA-2132295"],"synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class II","type":"broad"},{"name":"antigen presentation, exogenous peptide antigen","type":"broad"},{"name":"antigen processing, exogenous antigen via major histocompatibility complex class II","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0019886"}


id: MONDO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor characterized by the presence of an embryonal carcinoma component and a teratoma component.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","termid":"MONDO:0002510"},{"relation_name":"is_a","term_name":"mixed germ cell tumor","termid":"MONDO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"teratocarcinoma","secondary_identifiers":["ICDO:9081/3","DOID:3305","MEDGEN:104913","MESH:D018243","NCIT:C3756","UMLS:C0206664"],"synonyms":[{"name":"mixed embryonal carcinoma and teratoma","type":"exact"},{"name":"teratocarcinoma","type":"exact"},{"name":"teratocarcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002599","xrefs":{"Monarch":{"xref_id":"0002599"}}}


id: PR:Q9HDX2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-lactate dehydrogenase [cytochrome] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized lactate 2-monooxygenase PB1A11.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A11.03","secondary_identifiers":["UniProtKB:Q9HDX2"],"synonyms":[{"name":"Spom972h-lldD","type":"exact"}],"termid":"PR:Q9HDX2"}


id: PBO:0062003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 2","termid":"PBO:0062003"}


id: MONDO:0005606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating adenocarcinoma in which the malignant cells form tubular structures. Representative examples include the tubular breast carcinoma and the gastric tubular adenocarcinoma.","definition_xrefs":["NCIT:C65192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"tubular adenocarcinoma","secondary_identifiers":["EFO:0006500","ICDO:8211/3","MEDGEN:61428","UMLS:C0205645","DOID:4929"],"synonyms":[{"name":"carcinoma, tubular cell, malignant","type":"exact"},{"name":"tubular adenocarcinoma","type":"exact"},{"name":"tubular adenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"tubular carcinoma","type":"exact"}],"termid":"MONDO:0005606","xrefs":{"Monarch":{"xref_id":"0005606"}}}


id: GO:0050593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-N-methylcoclaurine + H+ + NADPH + O2 = (S)-3'-hydroxy-N-methylcoclaurine + H2O + NADP+.","definition_xrefs":["EC:1.14.14.102","RHEA:16649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"N-methylcoclaurine 3'-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.71-RXN","KEGG_REACTION:R05732"],"synonyms":[{"name":"(S)-N-methylcoclaurine 3'-hydroxylase activity","type":"related"},{"name":"(S)-N-methylcoclaurine,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"},{"name":"N-methylcoclaurine 3'-hydroxylase activity","type":"exact"},{"name":"cytochrome P450 80B1 activity","type":"related"}],"termid":"GO:0050593"}


id: PBO:0040857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridge-like lipid transfer protein family member 3A","termid":"PBO:0040857"}


id: GO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["RESID:AA0191"],"gene_count":0,"genotype_count":0,"name":"obsolete alanine racemization (obsolete GO:0018086)","synonyms":[{"name":"alanine racemization","type":"exact"}],"termid":"GO:0018086"}


id: MONDO:0020371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Essential iris atrophy is a clinical variant of iridocorneal endothelial (ICE) syndrome, characterized by progressive iris atrophy and holes present on the surface of the iris, corneal edema, corectopia, uveal ectropion and anterior synechiae. Secondary glaucoma is also a common complication of the disease.","definition_xrefs":["Orphanet:98981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridocorneal endothelial syndrome","termid":"MONDO:0018988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential iris atrophy","secondary_identifiers":["GARD:19611","NORD:1109","SCTID:25913001","UMLS:C0271111","MEDGEN:543177","ICD9:364.51"],"termid":"MONDO:0020371","xrefs":{"Monarch":{"xref_id":"0020371"}}}


id: PBO:0041613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdk5 and Abl enzyme substrate 1","termid":"PBO:0041613"}


id: PBO:0091786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA poly(A)-bearing Prl89","termid":"PBO:0091786"}


id: PBO:0086402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative FAD transporter, similar to Flc1p and Flc2p; localized to the ER; FLC3 has a paralog, FLC1, that arose from the whole genome duplication","termid":"PBO:0086402"}


id: PATO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's exhibiting excessive discharge of blood from the blood vessels.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhagic","termid":"PATO:0002105"}


id: FYPO:0004378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at the silenced mating-type cassettes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at silent mating-type cassette","synonyms":[{"name":"normal protein localisation to heterochromatin at silent mating-type cassette","type":"exact"},{"name":"normal protein localization to heterochromatin at mating-type region","type":"exact"},{"name":"normal protein localization to heterochromatin at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"normal protein localization to mating-type region heterochromatin","type":"exact"},{"name":"normal protein localization to silent mating type heterochromatin","type":"exact"},{"name":"normal protein localization to silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004378"}


id: GO:0050241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline + NAD(P)+ = 1-pyrroline-2-carboxylate + NAD(P)H + H+.","definition_xrefs":["MetaCyc:PYRROLINE-2-CARBOXYLATE-REDUCTASE-RXN","EC:1.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyrroline-2-carboxylate reductase activity","synonyms":[{"name":"L-proline:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"delta1-pyrroline-2-carboxylate reductase activity","type":"related"}],"termid":"GO:0050241"}


id: PBO:0085585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Arf3p regulation and in transcription regulation; localizes to the nucleus and to endocytic patches; contains an N-terminal Zn-finger and ArfGAP homology domain, a C-terminal glutamine-rich region, and a UBA (ubiquitin associated) domain; gts1 mutations affect budding, cell size, heat tolerance, sporulation, life span, ultradian rhythms, endocytosis; expression oscillates in a pattern similar to metabolic oscillations","termid":"PBO:0085585"}


id: PBO:0004363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase N2227 family","termid":"PBO:0004363"}


id: PBO:0085584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in apoptosis; variously described as containing a BCL-2 homology (BH3) domain or as a member of the BAX inhibitor family; reported to promote apoptosis under some conditions and to inhibit it in others; localizes to ER and vacuole; may link the unfolded protein response to apoptosis via regulation of calcium-mediated signaling; translocates to mitochondria under apoptosis-inducing conditions in a process involving Mir1p and Cor1p","termid":"PBO:0085584"}


id: GO:0017095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucosaminyl-[heparan sulfate](n) + 3'-phosphoadenylyl sulfate = 6-sulfo-alpha-D-glucosaminyl-[heparan sulfate](n) + adenosine 3',5'-bisphosphate + H+.","definition_xrefs":["PMID:8631808","RHEA:56604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"heparan sulfate 6-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2076419"],"synonyms":[{"name":"heparan sulfate 6-O-sulfotransferase activity","type":"exact"},{"name":"heparan sulphate 6-O-sulphotransferase activity","type":"exact"},{"name":"heparin 6-O-sulfotransferase activity","type":"related"}],"termid":"GO:0017095"}


id: MONDO:0100268
data:
  {"annotated_genes":["SJAG_00891"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013952"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00891":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0005244","MONDO:0005559","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX14 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX14 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX14 defect","type":"exact"}],"termid":"MONDO:0100268","terms_by_termid":{"MONDO:0013952":null},"xrefs":{"Monarch":{"xref_id":"0100268"}}}


id: SO:0000375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 5.8S rRNA is an RNA component of the large subunit of cytosolic ribosomes in eukaryotes.","direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_5_8S_gene","termid":"SO:0002240"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_5_8S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/5.8S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 5.8S LSU rRNA","type":"exact"},{"name":"cytosolic 5.8S rRNA","type":"exact"},{"name":"cytosolic 5.8S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 5 8S","type":"exact"}],"termid":"SO:0000375"}


id: PBO:0083137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity ser/thr and tyrosine protein kinase; roles in chromosome segregation, meiotic entry, genome stability, phosphorylation-dependent protein degradation (Rcn1p and Cdc6p), inhibition of protein kinase A, transcriptional regulation, inhibition of RNA pol III, calcium stress and inhibition of Clb2p-Cdc28p after nuclear division; MCK1 has a paralog, YGK3, that arose from the whole genome duplication","termid":"PBO:0083137"}


id: PBO:0089571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Oss1","termid":"PBO:0089571"}


id: GO:0006874
data:
  {"annotated_genes":["SJAG_03879","SJAG_00916","SJAG_04167","SJAG_04028","SJAG_01400","SJAG_03793","SJAG_02240","SJAG_04757","SJAG_02019","SJAG_03850","SJAG_04698","SJAG_03866","SJAG_02532","SJAG_03631","SJAG_04892","SJAG_04096","SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69885,70650,71204,72065,73061,73150,73344,74876,78180,79768,79912,97888,99702,108601,113164,118382],"is_not":false,"summary":null,"term":"GO:0006874"},{"annotations":[70306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of calcium ions within a cell.","definition_xrefs":["GOC:ceb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"calcium ion homeostasis","termid":"GO:0055074"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00916":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_02019":null,"SJAG_02240":null,"SJAG_02532":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03879":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04167":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_04892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular calcium ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular calcium ion homeostasis","type":"exact"},{"name":"regulation of calcium ion concentration","type":"broad"}],"termid":"GO:0006874","terms_by_termid":{"GO:0006874":null,"GO:0032468":null}}


id: MONDO:0023704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of blepharo-cheilo-dontic syndrome with with cleft lip and palate, complete absence of deciduous teeth, hypodontia of permanent teeth, hair alterations, hypertelorism, midface hypoplasia, abnormal EEG, syndactyly, and other findings. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:3037904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"Martinez Monasterio Pinheiro syndrome","secondary_identifiers":["UMLS:C2931089","MEDGEN:419330","GARD:3404","MESH:C536027"],"synonyms":[{"name":"cleft lip-palate-oligodontia-syndactyly-hair alterations","type":"related"},{"name":"cleft lip/palate oligodontia syndactyly hair alterations","type":"related"}],"termid":"MONDO:0023704","xrefs":{"Monarch":{"xref_id":"0023704"}}}


id: MONDO:0007818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of decreased or absent presence or activity of signal transducer and activator of transcription 3 protein. Deficiency of this protein is associated with hyper-IgE syndrome.","definition_xrefs":["NCIT:C126342"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete immune deficiency with skin involvement (obsolete MONDO:0019305)","termid":"MONDO:0019305"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0000426","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgE recurrent infection syndrome 1, autosomal dominant","secondary_identifiers":["Orphanet:2314","OMIM:147060","OMIM:146840","MESH:C567925","GARD:6800","SCTID:50926003","MESH:C564135","DOID:3261"],"synonyms":[{"name":"AD hyperimmunoglobulin E syndrome","type":"exact"},{"name":"AD-HIES","type":"exact"},{"name":"Buckley syndrome","type":"exact"},{"name":"HIES autosomal dominant","type":"exact"},{"name":"HIES, autosomal dominant","type":"exact"},{"name":"JOB syndrome","type":"exact"},{"name":"Job syndrome autosomal dominant","type":"exact"},{"name":"Job's syndrome","type":"exact"},{"name":"STAT3 deficiency","type":"exact"},{"name":"autosomal dominant HIES","type":"exact"},{"name":"autosomal dominant hyper IgE syndrome","type":"exact"},{"name":"autosomal dominant hyper-IgE syndrome","type":"exact"},{"name":"autosomal dominant hyperimmunoglobulin E syndrome","type":"exact"},{"name":"hyper Ig E syndrome, autosomal dominant","type":"exact"},{"name":"hyper-IgE recurrent infection syndrome","type":"broad"},{"name":"hyper-IgE recurrent infection syndrome, autosomal dominant","type":"exact"},{"name":"hyper-IgE syndrome, autosomal dominant","type":"exact"},{"name":"hyperimmunoglobulin E recurrent infection syndrome, autosomal dominant","type":"exact"},{"name":"hyperimmunoglobulin E syndrome type 1","type":"exact"},{"name":"hyperimmunoglobulin E-recurrent infection syndrome","type":"broad"},{"name":"immunodeficiency with defective leukocyte and lymphocyte function and with response to histamine-1 antagonist","type":"exact"}],"termid":"MONDO:0007818","xrefs":{"Monarch":{"xref_id":"0007818"}}}


id: PBO:0068693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 74, pseudogene","termid":"PBO:0068693"}


id: GO:0045592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of antral ovarian follicle growth","termid":"GO:2000387"},{"relation_name":"regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cumulus cell differentiation","synonyms":[{"name":"regulation of ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0045592"}


id: MONDO:0016584
data:
  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012074"}]},"cv_name":"mondo","definition":"Mandibuloacral dysplasia (MAD) is a rare genetic bone disorder characterized by growth delay, postnatal development of craniofacial anomalies including mandibular hypoplasia, progressive acral osteolysis, mottled or patchy pigmentation, skin atrophy, and partial or generalized lipodystrophy.","definition_xrefs":["Orphanet:2457"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"mandibuloacral dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1398","OMIMPS:248370","icd11.foundation:1687046570","UMLS:C0432291","DOID:0081127","GARD:11893","MEDGEN:98485"],"synonyms":[{"name":"MAD","type":"exact"},{"name":"mandibuloacral dysplasia with lipodystrophy","type":"exact"}],"termid":"MONDO:0016584","terms_by_termid":{"MONDO:0012074":null},"xrefs":{"Monarch":{"xref_id":"0016584"}}}


id: PBO:0113517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein; centrally regulates metabolic homeostasis and carbon utilization during nutrient limitation by managing Snf1p activity; subunit of TORC1 rapamycin-sensitive complex involved in growth control; central scaffold that holds the different components of TORC1 together; contains four HEAT repeats and seven WD-40 repeats","termid":"PBO:0113517"}


id: MONDO:0958232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 90","secondary_identifiers":["OMIM:620722","UMLS:C5935579","MEDGEN:1855139"],"synonyms":[{"name":"deafness, autosomal dominant 90","type":"narrow"}],"termid":"MONDO:0958232","xrefs":{"Monarch":{"xref_id":"0958232"}}}


id: PBO:0048996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC5 antisense RNA 2","termid":"PBO:0048996"}


id: PBO:0075248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18","termid":"PBO:0075248"}


id: PBO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.9","termid":"PBO:0001611"}


id: GO:1905112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of centromere clustering at the nuclear envelope.","definition_xrefs":["GO_REF:0000058","PMID:22375062","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of centromere clustering at the mitotic nuclear envelope (obsolete GO:1905112)","synonyms":[{"name":"regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"regulation of centromere-SPB clustering","type":"related"},{"name":"regulation of kinetochore clustering at SPB","type":"related"},{"name":"regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"regulation of rabl configuration","type":"related"}],"termid":"GO:1905112"}


id: GO:0019796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of any amino acid not found, or rarely found, in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nonprotein amino acid catabolic process (obsolete GO:0019796)","synonyms":[{"name":"nonprotein amino acid breakdown","type":"exact"},{"name":"nonprotein amino acid catabolic process","type":"exact"},{"name":"nonprotein amino acid catabolism","type":"exact"},{"name":"nonprotein amino acid degradation","type":"exact"}],"termid":"GO:0019796"}


id: MONDO:0022401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cortical malformations characterized by no gyri, broad gyri and/or an excessive number of abnormally small gyri that result in an irregular cortical surface with lumpy aspect.","definition_xrefs":["PMID:22333901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agyria pachygyria polymicrogyria","termid":"MONDO:0022401","xrefs":{"Monarch":{"xref_id":"0022401"}}}


id: PBO:0077208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 2","termid":"PBO:0077208"}


id: GO:2000939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant-type cell wall cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan metabolic process","termid":"GO:0032950"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"regulates","term_name":"plant-type cell wall cellulose catabolic process","termid":"GO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of plant-type cell wall cellulose catabolic process","synonyms":[{"name":"regulation of plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000939"}


id: PBO:0050988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 74","termid":"PBO:0050988"}


id: GO:2001104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a heptasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"heptasaccharide transport","termid":"GO:2001104"}


id: GO:1900454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of long term synaptic depression.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic depression","termid":"GO:1900452"},{"relation_name":"positively_regulates","term_name":"long-term synaptic depression","termid":"GO:0060292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-term synaptic depression","synonyms":[{"name":"activation of LTD","type":"related"},{"name":"activation of long term depression","type":"broad"},{"name":"activation of long term synaptic depression","type":"narrow"},{"name":"positive regulation of LTD","type":"related"},{"name":"positive regulation of long term depression","type":"broad"},{"name":"positive regulation of long term synaptic depression","type":"exact"},{"name":"up regulation of LTD","type":"related"},{"name":"up regulation of long term depression","type":"broad"},{"name":"up regulation of long term synaptic depression","type":"exact"},{"name":"up-regulation of LTD","type":"related"},{"name":"up-regulation of long term depression","type":"broad"},{"name":"up-regulation of long term synaptic depression","type":"exact"},{"name":"upregulation of LTD","type":"related"},{"name":"upregulation of long term depression","type":"broad"},{"name":"upregulation of long term synaptic depression","type":"exact"}],"termid":"GO:1900454"}


id: GO:0017119
data:
  {"annotated_genes":["SJAG_01071","SJAG_00578","SJAG_01459","SJAG_02211","SJAG_03158","SJAG_00041","SJAG_03054"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69178,69951,74965,77086,88708,109294,116640],"is_not":false,"summary":null,"term":"GO:0017119"}]},"cv_name":"cellular_component","definition":"A multisubunit tethering complex of the CATCHR family (complexes associated with tethering containing helical rods) that has a role in tethering vesicles to the Golgi prior to fusion. Composed of 8 subunits COG1-8.","definition_xrefs":["PMID:11980916","GOC:krc","PMID:20972446","PMID:9792665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00578":null,"SJAG_01071":null,"SJAG_01459":null,"SJAG_02211":null,"SJAG_03054":null,"SJAG_03158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005794","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi transport complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COG complex","type":"exact"},{"name":"Sec34/35 complex","type":"narrow"},{"name":"conserved oligomeric Golgi complex","type":"exact"}],"termid":"GO:0017119","terms_by_termid":{"GO:0017119":null}}


id: PBO:0076437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 13","termid":"PBO:0076437"}


id: GO:0005213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an egg chorion. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of egg chorion","synonyms":[{"name":"structural constituent of chorion","type":"broad"},{"name":"structural protein of chorion","type":"narrow"}],"termid":"GO:0005213"}


id: PBO:0091638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase, implicated in cellular detoxification","termid":"PBO:0091638"}


id: PBO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c'' (predicted)","termid":"PBO:0002451"}


id: GO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a leukocyte to vascular endothelial cell via adhesion molecules.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:23897866","GOC:add","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}


id: GO:1901989
data:
  {"annotated_genes":["SJAG_04259","SJAG_03592","SJAG_02404","SJAG_02498","SJAG_01401","SJAG_01679","SJAG_02342","SJAG_00256","SJAG_03309","SJAG_03591","SJAG_00145","SJAG_03602","SJAG_04968","SJAG_02169","SJAG_04597","SJAG_03048","SJAG_02451","SJAG_03681","SJAG_04332","SJAG_01837","SJAG_00666","SJAG_04573","SJAG_00883","SJAG_02336","SJAG_00117","SJAG_02810","SJAG_02592","SJAG_00214","SJAG_01825","SJAG_00216","SJAG_01210","SJAG_03126","SJAG_01297","SJAG_00082","SJAG_01901","SJAG_01000","SJAG_04140","SJAG_03067","SJAG_01311","SJAG_02380","SJAG_03699","SJAG_04486","SJAG_03486","SJAG_02723","SJAG_03353","SJAG_01801","SJAG_01456","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107032,114072,115709,90477,99376,103681,111757,113584,108054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[93959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[89745,93509,111759,102161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"},{"annotations":[106454,116880,102162,105615,108987,105770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[70563,101546,91491,91895,87803,94169,93560,73241,98785,87794,107035,110998,116294,116482,94130,98214,103280,110142,108377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[101173,87595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[73246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[94918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[99926,93563,97472,101897,102169,111173,114576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[76469,115713,74559,91503,115148,108697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell cycle phase transition.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:22841721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"positively_regulates","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00145":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01210":null,"SJAG_01297":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01456":null,"SJAG_01679":null,"SJAG_01801":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02380":null,"SJAG_02404":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03126":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03486":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell cycle phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle phase transition","type":"narrow"},{"name":"activation of cell cycle transition","type":"exact"},{"name":"positive regulation of cell cycle transition","type":"exact"},{"name":"up regulation of cell cycle phase transition","type":"exact"},{"name":"up regulation of cell cycle transition","type":"exact"},{"name":"up-regulation of cell cycle phase transition","type":"exact"},{"name":"up-regulation of cell cycle transition","type":"exact"},{"name":"upregulation of cell cycle phase transition","type":"exact"},{"name":"upregulation of cell cycle transition","type":"exact"}],"termid":"GO:1901989","terms_by_termid":{"GO:0007089":null,"GO:0010971":null,"GO:0031536":null,"GO:0045842":null,"GO:0110032":null,"GO:0140499":null,"GO:1900087":null,"GO:1902426":null,"GO:1905191":null,"GO:1905287":null}}


id: GO:0046419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving octopine, (N-(1-carboxy-4-guanidinobutyl)-L-alanine), an amino acid derived opine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete octopine metabolic process (obsolete GO:0046419)","synonyms":[{"name":"octopine metabolism","type":"exact"}],"termid":"GO:0046419"}


id: GO:0072248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a metanephric glomerular visceral epithelial cell. A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"podocyte differentiation","termid":"GO:0072112"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric podocyte differentiation","synonyms":[{"name":"metanephric glomerular visceral epithelial cell differentiation","type":"exact"}],"termid":"GO:0072248"}


id: GO:0140563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-3-O-(beta-D-glucosyl)-L-serine = UDP + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine.","definition_xrefs":["PMID:30127001","EC:2.4.2.42","RHEA:56064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-D-xylose:beta-D-glucoside alpha-1,3-D-xylosyltransferase activity","termid":"GO:0140563"}


id: PBO:0034043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-allelopath_of","termid":"PBO:0034043"}


id: GO:1990368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to hydrolysate (product of hydrolysis).","definition_xrefs":["PMID:23356676","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to hydrolysate (obsolete GO:1990368)","synonyms":[{"name":"process resulting in tolerance to hydrolysate","type":"exact"}],"termid":"GO:1990368"}


id: PBO:0076341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 9","termid":"PBO:0076341"}


id: PBO:0045795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like repeats and discoidin domains 3","termid":"PBO:0045795"}


id: GO:0021502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the lateral borders of the neural plate begin to migrate upwards to form the neural folds, caused by the proliferation of the underlying mesoderm.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","PMID:15806586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural fold formation","termid":"GO:0001842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold elevation formation","termid":"GO:0021502"}


id: PBO:0075254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 7","termid":"PBO:0075254"}


id: PBO:0070194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 116 pseudogene","termid":"PBO:0070194"}


id: GO:0032775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to N-6 of adenine in a DNA molecule.","definition_xrefs":["GOC:pf"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on adenine (obsolete GO:0032775)","synonyms":[{"name":"adenine methylation","type":"related"}],"termid":"GO:0032775"}


id: PBO:0049389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 2","termid":"PBO:0049389"}


id: PBO:0086077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to F-box proteins; interacts with the core SCF ubiquitin ligase complex subunits Skp1p and Cdc53p; LUG1 deletion prevents cells containing the [URE3] prion or lacking Ure2p from growing on glycerol","termid":"PBO:0086077"}


id: GO:0106426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the kainate selective glutamate receptor signaling pathway.","definition_xrefs":["PMID:12597860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"regulates","term_name":"kainate selective glutamate receptor signaling pathway","termid":"GO:0098991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"}


id: PBO:0077384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 125","termid":"PBO:0077384"}


id: MONDO:0003665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical adenocarcinoma with the histologic characteristics of the endometrioid adenocarcinoma of the endometrium.","definition_xrefs":["NCIT:C6343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrioid adenocarcinoma","termid":"MONDO:0005026"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical endometrioid adenocarcinoma","secondary_identifiers":["DOID:5830","EFO:1000164","MEDGEN:272450","ONCOTREE:CEEN","UMLS:C1332913"],"synonyms":[{"name":"cervical endometrioid adenocarcinoma","type":"exact"},{"name":"cervical endometrioid carcinoma","type":"exact"},{"name":"cervix endometrioid adenocarcinoma","type":"exact"},{"name":"cervix endometrioid carcinoma","type":"exact"},{"name":"cervix uteri endometrioid adenocarcinoma","type":"exact"},{"name":"cervix uteri endometrioid carcinoma","type":"exact"},{"name":"endometrioid adenocarcinoma of cervix","type":"exact"},{"name":"endometrioid adenocarcinoma of cervix uteri","type":"exact"},{"name":"endometrioid adenocarcinoma of the cervix","type":"exact"},{"name":"endometrioid adenocarcinoma of the cervix uteri","type":"exact"},{"name":"endometrioid adenocarcinoma of the uterine cervix","type":"exact"},{"name":"endometrioid adenocarcinoma of uterine cervix","type":"exact"},{"name":"endometrioid carcinoma of cervix","type":"exact"},{"name":"endometrioid carcinoma of cervix uteri","type":"exact"},{"name":"endometrioid carcinoma of the cervix","type":"exact"},{"name":"endometrioid carcinoma of the cervix uteri","type":"exact"},{"name":"endometrioid carcinoma of the uterine cervix","type":"exact"},{"name":"endometrioid carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix endometrioid adenocarcinoma","type":"exact"},{"name":"uterine cervix endometrioid carcinoma","type":"exact"}],"termid":"MONDO:0003665","xrefs":{"Monarch":{"xref_id":"0003665"}}}


id: PBO:0068199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 506","termid":"PBO:0068199"}


id: MONDO:0100329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The initial viral infectious disase that causes illness.","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary viral infectious disease","termid":"MONDO:0100329","xrefs":{"Monarch":{"xref_id":"0100329"}}}


id: GO:0035752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:bf","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysosomal lumen pH","termid":"GO:0035751"},{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosomal lumen pH elevation","synonyms":[{"name":"lysosome pH elevation","type":"exact"}],"termid":"GO:0035752"}


id: FYPO:0006778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the septin ring does not associate with the prospore membrane during prospore membrane formation and closure. Normally, the septin ring forms in close association with the assembling prospore membrane.","definition_xrefs":["PMID:20123972","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"prospore formation with septin ring dissociated from prospore membrane","synonyms":[{"name":"forespore formation with septin ring dissociated from FSM","type":"exact"},{"name":"forespore formation with septin ring dissociated from forespore membrane","type":"exact"},{"name":"prospore septin ring dissociated from prospore membrane","type":"exact"},{"name":"septin ring separated from FSM","type":"exact"}],"termid":"FYPO:0006778"}


id: GO:0019844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of any microbial toxin that cannot be easily separated from the structure of the cell.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete endotoxin activity (obsolete GO:0019844)","synonyms":[{"name":"endotoxin activity","type":"exact"}],"termid":"GO:0019844"}


id: FYPO:0003006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to caffeine","synonyms":[{"name":"decreased protein phosphorylation during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to caffeine","type":"exact"}],"termid":"FYPO:0003006"}


id: GO:0046259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of trinitrotoluene, a methylated benzene molecule with three NO2 groups attached to it.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete trinitrotoluene biosynthetic process (obsolete GO:0046259)","synonyms":[{"name":"trinitrotoluene anabolism","type":"exact"},{"name":"trinitrotoluene biosynthesis","type":"exact"},{"name":"trinitrotoluene biosynthetic process","type":"exact"},{"name":"trinitrotoluene formation","type":"exact"},{"name":"trinitrotoluene synthesis","type":"exact"}],"termid":"GO:0046259"}


id: PBO:0047959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(22)(q12.2)","termid":"PBO:0047959"}


id: PBO:0017425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_part_of","termid":"PBO:0017425"}


id: GO:0080131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroxyjasmonate + 3'-phosphoadenosine-5'-phosphosulfate = a hydroxyjasmonate sulfate + adenosine-3',5'-diphosphate.","definition_xrefs":["PMID:12637544","EC:2.8.2.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyjasmonate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-10451"],"synonyms":[{"name":"11-OHJA sulfotransferase activity","type":"narrow"},{"name":"11-hydroxyjasmonate sulfotransferase activity","type":"narrow"},{"name":"11-hydroxyjasmonic acid sulfotransferase activity","type":"narrow"},{"name":"12-OHJA sulfotransferase activity","type":"narrow"},{"name":"12-hydroxyjasmonate sulfotransferase activity","type":"narrow"},{"name":"12-hydroxyjasmonic acid sulfotransferase activity","type":"narrow"},{"name":"OHJA sulfotransferase activity","type":"exact"},{"name":"hydroxyjasmonic acid sulfotransferase activity","type":"exact"}],"termid":"GO:0080131"}


id: FYPO:0004382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a single kinetochore becomes attached to both spindle poles, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"merotelic kinetochore attachment during mitosis","termid":"FYPO:0004381"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0000641"],"is_obsolete":false,"name":"meroterically attached lagging mitotic chromosomes","synonyms":[{"name":"abnormal mitotic sister chromatid segregation, with merotelic kinetochore attachment and lagging mitotic chromosomes","type":"exact"},{"name":"lagging mitotic chromosomes with merotelic kinetochore attachment","type":"exact"},{"name":"lagging mitotic sister chromatids, with merotelic kinetochore attachment","type":"exact"},{"name":"merotelic kinetochore attachment with lagging mitotic chromosomes","type":"exact"},{"name":"meroterically attached lagging mitotic chromosomes during mitotic cell cycle","type":"related"},{"name":"meroterically attached lagging mitotic chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0004382"}


id: PBO:0054870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2284","termid":"PBO:0054870"}


id: SO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U6_snRNA"],"synonyms":[{"name":"U6 small nuclear RNA","type":"exact"},{"name":"U6 snRNA","type":"exact"},{"name":"small nuclear RNA U6","type":"exact"},{"name":"snRNA U6","type":"exact"}],"termid":"SO:0000396"}


id: GO:0043545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"exact"},{"name":"Moco metabolism","type":"exact"},{"name":"molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0043545"}


id: MONDO:1012511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized myoclonic epilepsy with photosensitivity, non-human animal","termid":"MONDO:1011639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized myoclonic epilepsy with photosensitivity, dog","secondary_identifiers":["OMIA:002095-9615"],"termid":"MONDO:1012511","xrefs":{"Monarch":{"xref_id":"1012511"}}}


id: PBO:0072483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 12","termid":"PBO:0072483"}


id: MONDO:0008241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycoprotein 1","secondary_identifiers":["OMIM:172290","UMLS:C1868352","MEDGEN:401424"],"synonyms":[{"name":"PGP1","type":"related"},{"name":"phosphoglycoprotein 1","type":"exact"},{"name":"phosphoglycoprotein type 1","type":"exact"}],"termid":"MONDO:0008241","xrefs":{"Monarch":{"xref_id":"0008241"}}}


id: PBO:0071100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 102","termid":"PBO:0071100"}


id: MONDO:0005947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia caused by infection with bacteria of the family rickettsiaceae.","definition_xrefs":["MESH:D011022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsiaceae infectious disease","termid":"MONDO:0006927"},{"relation_name":"is_a","term_name":"pneumonia caused by gram negative bacteria","termid":"MONDO:0041850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickettsial pneumonia","secondary_identifiers":["MEDGEN:45973","ICD9:484.8","SCTID:233621003","UMLS:C0032307"],"synonyms":[{"name":"Rickettsiaceae caused pneumonia","type":"exact"},{"name":"Rickettsiaceae pneumonia","type":"exact"}],"termid":"MONDO:0005947","xrefs":{"Monarch":{"xref_id":"0005947"}}}


id: GO:0032067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA in a site specific manner. Cleavage is dependent on the presence of a specific recognition site in the DNA which must be modified (e.g. methylated, hydroxymethylated, glucosyl-hydroxymethylated).","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"type IV site-specific deoxyribonuclease activity","synonyms":[{"name":"type IV restriction enzyme activity","type":"exact"}],"termid":"GO:0032067"}


id: PBO:0071096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 98","termid":"PBO:0071096"}


id: PBO:0066364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 5","termid":"PBO:0066364"}


id: FYPO:0003125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translational initiation in the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cytoplasmic translational initiation","synonyms":[{"name":"decreased cytoplasmic translation initiation","type":"exact"},{"name":"decreased cytoplasmic translational initiation during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic translational initiation during vegetative growth","type":"exact"},{"name":"reduced cytoplasmic translational initiation","type":"exact"}],"termid":"FYPO:0003125"}


id: PBO:0088017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments","termid":"PBO:0088017"}


id: PBO:0070758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 14","termid":"PBO:0070758"}


id: GO:0051357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a 2-keto-5-iminopiperazine protein chromophore cross-link from the alpha-amino nitrogen of residue n, a methionine, to the alpha-carboxyl carbon of residue n+1, a tyrosine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+2. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["PMID:15491166","RESID:AA0377","PMID:10852900","PMID:11259412"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one (obsolete GO:0051357)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"}],"termid":"GO:0051357"}


id: MONDO:0005039
data:
  {"annotated_genes":["SJAG_00637","SJAG_01419","SJAG_02696","SJAG_03854","SJAG_04337","SJAG_04703","SJAG_03720","SJAG_03418","SJAG_05196","SJAG_02035","SJAG_02148","SJAG_00103","SJAG_03077","SJAG_02237","SJAG_04114","SJAG_02463","SJAG_04398","SJAG_02829","SJAG_04270","SJAG_04148","SJAG_00377","SJAG_00786","SJAG_01837","SJAG_00301","SJAG_00663","SJAG_03051","SJAG_04950","SJAG_04885","SJAG_00997","SJAG_04280","SJAG_02294","SJAG_02339","SJAG_00630","SJAG_02690","SJAG_04110","SJAG_02748","SJAG_03698","SJAG_04738","SJAG_03286","SJAG_01680","SJAG_03635","SJAG_01941","SJAG_00666","SJAG_07002","SJAG_02500","SJAG_02006","SJAG_04663","SJAG_01465","SJAG_01156","SJAG_04003","SJAG_04176","SJAG_02223","SJAG_04682","SJAG_04324","SJAG_03429","SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009916"},{"annotations":[85578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[86077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[85160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[86619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[85965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010814"},{"annotations":[85718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[85323,85322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"},{"annotations":[86485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[84799,87016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[86877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[85282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013722"},{"annotations":[85252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[84961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[85350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030925"},{"annotations":[85345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859330"},{"annotations":[86332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859521"},{"annotations":[85689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021573"},{"annotations":[85780,85779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020837"},{"annotations":[85800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957961"},{"annotations":[86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[86953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[85763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[86452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"},{"annotations":[85379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86169,86170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[85464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[85866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[86761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86354,86355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"},{"annotations":[87068,87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"},{"annotations":[84858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014686"},{"annotations":[86964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013901"},{"annotations":[86939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014961"},{"annotations":[85141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054725"},{"annotations":[84970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054726"},{"annotations":[86161,86162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054732"},{"annotations":[86563,86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011720"},{"annotations":[84921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"},{"annotations":[85831,85832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030507"},{"annotations":[85849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030515"},{"annotations":[86841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030733"},{"annotations":[86704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030787"},{"annotations":[85723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024773"},{"annotations":[85741,85744,85743,85742,85738,85740,85739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[85469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030869"}]},"cv_name":"mondo","definition":"A disease involving the reproductive system.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00301":null,"SJAG_00377":null,"SJAG_00630":null,"SJAG_00637":null,"SJAG_00663":null,"SJAG_00666":null,"SJAG_00786":null,"SJAG_00997":null,"SJAG_01156":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_01941":null,"SJAG_02006":null,"SJAG_02035":null,"SJAG_02148":null,"SJAG_02223":null,"SJAG_02237":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02463":null,"SJAG_02500":null,"SJAG_02690":null,"SJAG_02696":null,"SJAG_02748":null,"SJAG_02829":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03077":null,"SJAG_03286":null,"SJAG_03418":null,"SJAG_03429":null,"SJAG_03635":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_03854":null,"SJAG_04003":null,"SJAG_04110":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04176":null,"SJAG_04270":null,"SJAG_04280":null,"SJAG_04324":null,"SJAG_04337":null,"SJAG_04398":null,"SJAG_04663":null,"SJAG_04682":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04885":null,"SJAG_04950":null,"SJAG_05196":null,"SJAG_07002":null},"genotype_count":0,"is_obsolete":false,"name":"reproductive system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0178829","NCIT:C4875","MEDGEN:61253","SCTID:362968007","DOID:15","Wikipedia:Reproductive_system_disease","EFO:0000512"],"synonyms":[{"name":"disease of reproductive system","type":"exact"},{"name":"disease or disorder of reproductive system","type":"exact"},{"name":"disorder of reproductive system","type":"exact"},{"name":"genital disorders","type":"exact"},{"name":"genital system disease","type":"exact"},{"name":"reproductive disease","type":"exact"},{"name":"reproductive system disease","type":"exact"},{"name":"reproductive system disease or disorder","type":"exact"},{"name":"reproductive system disorder","type":"exact"}],"termid":"MONDO:0005039","terms_by_termid":{"MONDO:0008840":null,"MONDO:0008980":null,"MONDO:0009050":null,"MONDO:0009258":null,"MONDO:0009461":null,"MONDO:0009514":null,"MONDO:0009916":null,"MONDO:0010350":null,"MONDO:0010767":null,"MONDO:0010814":null,"MONDO:0010961":null,"MONDO:0011503":null,"MONDO:0011720":null,"MONDO:0011962":null,"MONDO:0012794":null,"MONDO:0013310":null,"MONDO:0013689":null,"MONDO:0013722":null,"MONDO:0013872":null,"MONDO:0013901":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014497":null,"MONDO:0014686":null,"MONDO:0014843":null,"MONDO:0014961":null,"MONDO:0020837":null,"MONDO:0021573":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030736":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0030870":null,"MONDO:0030925":null,"MONDO:0032747":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0859330":null,"MONDO:0859521":null,"MONDO:0957961":null,"MONDO:0958035":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0005039"}}}


id: FYPO:0000714
data:
  {"alleles_by_uniquename":{"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119279],"is_not":false,"summary":null,"term":"FYPO:0000714"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to leptomycin B. Cells stop growing (and may die) at a concentration of leptomycin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05207":null},"genotype_count":1,"genotypes_by_uniquename":{"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to leptomycin B","references_by_uniquename":{"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_05207"],"single_locus_genotype_uniquenames":["cmp7delta"],"synonyms":[{"name":"hypersensitive to leptomycin B","type":"exact"},{"name":"sensitive to LMB","type":"exact"},{"name":"sensitive to leptomycin B during mitotic cell cycle","type":"related"},{"name":"sensitive to leptomycin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000714","terms_by_termid":{"FYPO:0000714":null}}


id: GO:0015358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete amino acid/choline transmembrane transporter activity (obsolete GO:0015358)","synonyms":[{"name":"amino acid/choline transmembrane transporter activity","type":"exact"}],"termid":"GO:0015358"}


id: MONDO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic respiratory disease caused by the visna-maedi virus. It was formerly believed to be identical with jaagsiekte (pulmonary adenomatosis, ovine) but is now recognized as a separate entity.","definition_xrefs":["MESH:D011021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, progressive interstitial, of sheep","synonyms":[{"name":"Maedi","type":"related"},{"name":"progressive interstitial pneumonia of sheep","type":"related"}],"termid":"MONDO:0025453","xrefs":{"Monarch":{"xref_id":"0025453"}}}


id: PBO:0082095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase; catalyzes the second step of the pentose phosphate pathway; weak multicopy suppressor of los1-1 mutation; homologous to Sol2p and Sol1p; SOL3 has a paralog, SOL4, that arose from the whole genome duplication","termid":"PBO:0082095"}


id: PBO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDR kinase Sid2","termid":"PBO:0000216"}


id: PBO:0072596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"round spermatid basic protein 1","termid":"PBO:0072596"}


id: GO:0070042
data:
  {"annotated_genes":["SJAG_03008"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79252],"is_not":false,"summary":null,"term":"GO:0070042"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N3-methyluridine.","definition_xrefs":["GOC:mah","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (uridine) methyltransferase activity","termid":"GO:0016436"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"rRNA (uridine-N3-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070042","terms_by_termid":{"GO:0070042":null}}


id: MOD:01514
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.01 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.1 Da","termid":"MOD:01513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}


id: PBO:0029941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cone-shaped_colony_morphology","termid":"PBO:0029941"}


id: MONDO:0002928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor composed of a mixture of carcinomatous and sarcomatous elements.","definition_xrefs":["NCIT:C34448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinosarcoma","secondary_identifiers":["DOID:4236","UMLS:C0007140","MESH:D002296","ICDO:8980/3","MEDGEN:2876"],"synonyms":[{"name":"MMMT","type":"exact"},{"name":"carcinosarcoma","type":"exact"},{"name":"carcinosarcoma, malignant","type":"exact"},{"name":"malignant mixed Mullerian tumor","type":"exact"},{"name":"malignant mixed Mullerian tumour","type":"exact"},{"name":"malignant mixed mesodermal (mullerian) tumor","type":"exact"},{"name":"malignant mixed mesodermal (mullerian) tumour","type":"exact"},{"name":"mesodermal mixed tumor","type":"exact"},{"name":"mesodermal mixed tumor (morphologic abnormality)","type":"exact"},{"name":"mesodermal mixed tumour","type":"exact"},{"name":"mesodermal mixed tumour (morphologic abnormality)","type":"exact"},{"name":"mixed Mullerian tumor","type":"related"},{"name":"mixed Mullerian tumour","type":"related"},{"name":"mixed mesodermal (mullerian) tumor","type":"exact"},{"name":"mixed mesodermal (mullerian) tumour","type":"exact"},{"name":"mixed tumor, Mullerian","type":"related"},{"name":"mullerian mixed tumor","type":"exact"},{"name":"mullerian mixed tumor (morphologic abnormality)","type":"exact"},{"name":"mullerian mixed tumour","type":"exact"},{"name":"mullerian mixed tumour (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002928","xrefs":{"Monarch":{"xref_id":"0002928"}}}


id: PBO:0005252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cinnamoyl-CoA reductase pseudogene","termid":"PBO:0005252"}


id: GO:0039664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The viral-induced lysis of an organelle (endosome, lysosome, or caveosome) that is involved in the uptake of a virus into a host cell. Occurs once the virus is within the organelle, and results in transfer of the viral contents from the organelle compartment into the cytoplasm.","definition_xrefs":["GOC:bf","GOC:jl","VZ:984","UniProtKB-KW:KW-1174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysis of host organelle involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via endosome membrane lysis","type":"narrow"},{"name":"viral entry into host cell via lysis of host organelle membrane","type":"related"},{"name":"viral membrane-lytic protein","type":"related"},{"name":"viral penetration via lysis of host organellar membrane","type":"exact"}],"termid":"GO:0039664"}


id: GO:0062235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal basal plate.","definition_xrefs":["PMID:23352055","PMID:30810527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"axonemal basal plate assembly","synonyms":[{"name":"axonemal basal plate formation","type":"narrow"},{"name":"axoneme basal plate assembly","type":"exact"},{"name":"basal plate assembly","type":"broad"}],"termid":"GO:0062235"}


id: PBO:0066800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 99","termid":"PBO:0066800"}


id: PBO:0041725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II alpha","termid":"PBO:0041725"}


id: PBO:0053666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 844","termid":"PBO:0053666"}


id: PR:000050218
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been ubiquitinated on Lys-15. Example: UniProtKB:P09988, 2-136, Lys-15, MOD:01148.","definition_xrefs":["PMID:31468675","PomBase:MAH","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Ubiq(K14)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"H3K14ub","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K14-ubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"hht2/InitMet-/Ubiq:(K15)","type":"exact"},{"name":"hht2/Ubiq(K14)","type":"exact"}],"termid":"PR:000050218"}


id: GO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-glutamine + H2O = protein L-glutamate + NH3.","definition_xrefs":["EC:3.5.1.44","MetaCyc:CHEBDEAMID-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"protein-glutamine glutaminase activity","secondary_identifiers":["RHEA:16441"],"synonyms":[{"name":"destabilase activity","type":"related"},{"name":"glutaminyl-peptide glutaminase activity","type":"related"},{"name":"glutaminylpeptide glutaminase activity","type":"related"},{"name":"peptidoglutaminase II activity","type":"related"},{"name":"peptidylglutaminase II","type":"related"},{"name":"protein-L-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050568"}


id: GO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of molybdenum into a protein via L-cysteinyl molybdopterin.","definition_xrefs":["RESID:AA0142"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum incorporation via L-cysteinyl molybdopterin (obsolete GO:0018292)","termid":"GO:0018292"}


id: GO:1900790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pseurotin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"},{"relation_name":"is_a","term_name":"pseurotin A metabolic process","termid":"GO:1900788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pseurotin A biosynthetic process","synonyms":[{"name":"Pseurotin anabolism","type":"related"},{"name":"Pseurotin biosynthesis","type":"related"},{"name":"Pseurotin biosynthetic process","type":"related"},{"name":"Pseurotin formation","type":"related"},{"name":"Pseurotin synthesis","type":"related"},{"name":"pseurotin A anabolism","type":"exact"},{"name":"pseurotin A biosynthesis","type":"exact"},{"name":"pseurotin A formation","type":"exact"},{"name":"pseurotin A synthesis","type":"exact"}],"termid":"GO:1900790"}


id: GO:0004235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Ala14-Leu15 and Tyr16-Leu17 in B chain of insulin. No action on collagen types I, II, IV and V. Cleaves gelatin chain alpha-2(I) > alpha-1(I).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete matrilysin activity (obsolete GO:0004235)","synonyms":[{"name":"MMP","type":"related"},{"name":"MMP 7","type":"related"},{"name":"MMP-7","type":"exact"},{"name":"PUMP","type":"related"},{"name":"PUMP-1 activity","type":"narrow"},{"name":"PUMP-1 proteinase activity","type":"related"},{"name":"matrilysin activity","type":"exact"},{"name":"matrin activity","type":"related"},{"name":"matrix metalloproteinase 7 activity","type":"related"},{"name":"matrix metalloproteinase pump 1","type":"related"},{"name":"metalloproteinase pump-1","type":"related"},{"name":"putative (or punctuated) metalloproteinase-1 activity","type":"narrow"},{"name":"putative metalloproteinase activity","type":"related"},{"name":"uterine metalloendopeptidase activity","type":"narrow"}],"termid":"GO:0004235"}


id: PBO:0072845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2","termid":"PBO:0072845"}


id: PBO:0043397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"c-Maf inducing protein","termid":"PBO:0043397"}


id: PBO:0061338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein pseudogene 1","termid":"PBO:0061338"}


id: PBO:0047328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid hydroxylase domain containing 2","termid":"PBO:0047328"}


id: PBO:0004500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1","termid":"PBO:0004500"}


id: MONDO:0015029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"extraneural perineurioma","termid":"MONDO:0015031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticular perineurioma","secondary_identifiers":["MEDGEN:1842718","icd11.foundation:9105270","Orphanet:100000","UMLS:C5681810","GARD:19728"],"termid":"MONDO:0015029","xrefs":{"Monarch":{"xref_id":"0015029"}}}


id: PATO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer being divided into multiple parts.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multipartite","termid":"PATO:0002510"}


id: MONDO:0017812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare PIK3CA-related overgrowth syndrome disease characterized by segmental and progressive overgrowth, predominantly involving the adipose tissue, or a mixture of adipose and fibrous tissue, with variable involvement of subcutaneous and muscular tissue, as well as skeletal overgrowth. Overgrowth severity and range is highly variable, although frequently it is asymmetric and disproportionate, it affects lower extremities more than the upper ones, and progresses in a distal to proximal patten. Congenital overgrowth is typically associated.","definition_xrefs":["Orphanet:314662"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"PIK3CA-related overgrowth spectrum","termid":"MONDO:1040002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmental progressive overgrowth syndrome with fibroadipose hyperplasia","secondary_identifiers":["MEDGEN:1673986","UMLS:C5192432","GARD:21384"],"termid":"MONDO:0017812","xrefs":{"Monarch":{"xref_id":"0017812"}}}


id: PBO:0051487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF3 pseudogene 2","termid":"PBO:0051487"}


id: GO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a pattern recognition receptor (PRR), and ending with the regulation of a downstream cellular process, e.g. transcription. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species, or damage-associated molecular pattern (DAMPs), endogenous molecules released from damaged cells.","definition_xrefs":["PMID:15199967","ISBN:0781735149","GOC:add","GOC:ar"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response-activating signaling pathway","termid":"GO:0002758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"pattern recognition receptor signaling pathway","synonyms":[{"name":"PRR signaling pathway","type":"exact"},{"name":"pathogen receptor signaling pathway","type":"exact"},{"name":"pathogen receptor signalling pathway","type":"exact"}],"termid":"GO:0002221"}


id: PBO:0046276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMG1 N1-specific pseudouridine methyltransferase","termid":"PBO:0046276"}


id: GO:1901212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"is_a","term_name":"positive regulation of cardiac chamber morphogenesis","termid":"GO:1901221"},{"relation_name":"positively_regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber formation","synonyms":[{"name":"activation of cardiac chamber formation","type":"narrow"},{"name":"activation of heart chamber formation","type":"exact"},{"name":"positive regulation of heart chamber formation","type":"exact"},{"name":"up regulation of cardiac chamber formation","type":"exact"},{"name":"up regulation of heart chamber formation","type":"exact"},{"name":"up-regulation of cardiac chamber formation","type":"exact"},{"name":"up-regulation of heart chamber formation","type":"exact"},{"name":"upregulation of cardiac chamber formation","type":"exact"},{"name":"upregulation of heart chamber formation","type":"exact"}],"termid":"GO:1901212"}


id: PBO:0073182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein M","termid":"PBO:0073182"}


id: GO:0017181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthine, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthine catabolic process (obsolete GO:0017181)","synonyms":[{"name":"peptidyl-diphthine breakdown","type":"exact"},{"name":"peptidyl-diphthine catabolism","type":"exact"},{"name":"peptidyl-diphthine degradation","type":"exact"}],"termid":"GO:0017181"}


id: GO:0090426
data:
  {"annotated_genes":["SJAG_00938","SJAG_04498","SJAG_04621","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97806,107932,98072,89074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that results in the compaction of actin filaments.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle distribution","termid":"GO:0070650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"actin filament bundle convergence","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090426","terms_by_termid":{"GO:0071520":null}}


id: PBO:0039748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O","termid":"PBO:0039748"}


id: SO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uridine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_uridine","synonyms":[{"name":"modified uridine","type":"exact"}],"termid":"SO:0001277"}


id: GO:0031718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 cannabinoid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid receptor binding","termid":"GO:0031717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 cannabinoid receptor binding","synonyms":[{"name":"type 1 cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031718"}


id: PBO:0064926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit pseudogene","termid":"PBO:0064926"}


id: FYPO:0001106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione-disulfide reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000002","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal glutathione-disulfide reductase activity","synonyms":[{"name":"abnormal glutathione-disulphide reductase activity","type":"exact"}],"termid":"FYPO:0001106"}


id: FYPO:0002304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to salt stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to osmotic stress","termid":"FYPO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to salt stress","synonyms":[{"name":"decreased RNA level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to salt stress","type":"narrow"},{"name":"decreased transcript level during cellular response to salt stress","type":"exact"},{"name":"reduced RNA level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0002304"}


id: FYPO:0007767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of thiabendazole binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:33925026","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased thiabendazole binding","synonyms":[{"name":"decreased TBZ binding","type":"exact"},{"name":"reduced TBZ binding","type":"exact"},{"name":"reduced thiabendazole binding","type":"exact"}],"termid":"FYPO:0007767"}


id: PBO:0044057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin C","termid":"PBO:0044057"}


id: PBO:0038465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 4","termid":"PBO:0038465"}


id: FYPO:0004490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Transport RNAs are transcribed from genes whose products are involved in one or more transport processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0004490"}


id: PBO:0017405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, uncharacterized","termid":"PBO:0017405"}


id: MONDO:0003548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast carcinoma characterized by the presence of tubular and glandular neoplastic cell structures, admixed with islands of neoplastic cells showing squamous differentiation.","definition_xrefs":["NCIT:C40361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell breast carcinoma","termid":"MONDO:0006056"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous breast carcinoma","secondary_identifiers":["MEDGEN:267645","ONCOTREE:MASC","UMLS:C1510796","DOID:5623"],"synonyms":[{"name":"adenosquamous breast carcinoma","type":"exact"},{"name":"breast adenosquamous carcinoma","type":"exact"},{"name":"metaplastic adenosquamous carcinoma","type":"related"}],"termid":"MONDO:0003548","xrefs":{"Monarch":{"xref_id":"0003548"}}}


id: MONDO:0859046
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86693],"is_not":false,"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rhabdomyosarcoma, embryonal, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1867234","OMIM:180295","MEDGEN:357232"],"termid":"MONDO:0859046","terms_by_termid":{"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0859046"}}}


id: GO:0043116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular permeability","synonyms":[{"name":"down regulation of vascular permeability","type":"exact"},{"name":"down-regulation of vascular permeability","type":"exact"},{"name":"downregulation of vascular permeability","type":"exact"},{"name":"inhibition of vascular permeability","type":"narrow"}],"termid":"GO:0043116"}


id: GO:0006203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dGTP, guanosine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009217"},{"relation_name":"is_a","term_name":"dGTP metabolic process","termid":"GO:0046070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dGTP catabolic process","synonyms":[{"name":"dGTP breakdown","type":"exact"},{"name":"dGTP catabolism","type":"exact"},{"name":"dGTP degradation","type":"exact"}],"termid":"GO:0006203"}


id: GO:0018698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + chloroethene = A + chloride + ethene + H+.","definition_xrefs":["PMID:9171062","PMID:15294827","RHEA:68004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"chloroethene reductive dehalogenase activity","secondary_identifiers":["MetaCyc:VCREDCHLOR-RXN","UM-BBD_reactionID:r0352"],"synonyms":[{"name":"vinyl chloride reductive dehalogenase activity","type":"exact"}],"termid":"GO:0018698"}


id: PBO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 (predicted)","termid":"PBO:0001157"}


id: SO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["PMID:23241926","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_splicing_silencer","synonyms":[{"name":"ISS","type":"exact"},{"name":"intronic splicing silencer","type":"exact"}],"termid":"SO:0002056"}


id: FYPO:0003854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to an oligomycin antibiotic. Cells stop growing (and may die) at a concentration of oligomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to oligomycin","synonyms":[{"name":"hypersensitive to oligomycin","type":"exact"},{"name":"sensitive to oligomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to oligomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0003854"}


id: PBO:0045453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAQ-box RNA dependent ATPase 1","termid":"PBO:0045453"}


id: MONDO:0013072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the SYNE2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","secondary_identifiers":["OMIM:612999","GARD:18207","DOID:0070250","UMLS:C2751805","MEDGEN:414111"],"synonyms":[{"name":"EDMD5","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 5, autosomal dominant","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","type":"exact"},{"name":"SYNE2 autosomal dominant Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal dominant Emery-Dreifuss muscular dystrophy caused by mutation in SYNE2","type":"exact"}],"termid":"MONDO:0013072","xrefs":{"Monarch":{"xref_id":"0013072"}}}


id: MONDO:0004108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the diaphragma sellae.","definition_xrefs":["NCIT:C5283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sella turcica neoplasm","termid":"MONDO:0002720"},{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragma sellae meningioma","secondary_identifiers":["DOID:7103","UMLS:C1333283","MEDGEN:234200"],"synonyms":[{"name":"diaphragm sellae meningioma","type":"exact"},{"name":"diaphragma sellae meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of diaphragma sellae","type":"exact"},{"name":"meningioma of Diaphragma sellae","type":"exact"},{"name":"meningioma of diaphragm sellae","type":"exact"},{"name":"meningioma of the Diaphragma sellae","type":"exact"},{"name":"meningioma of the diaphragm sellae","type":"exact"}],"termid":"MONDO:0004108","xrefs":{"Monarch":{"xref_id":"0004108"}}}


id: FYPO:0004976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending in front of a moving spindle pole body occurs at a greater rate, or speed, than normal.","definition_xrefs":["PMID:16611238","GO:0036078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0003194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body","synonyms":[{"name":"decreased microtubule stability ahead of moving spindle pole body","type":"related"},{"name":"decreased stability of forwards-extending microtubules","type":"related"},{"name":"increased microtubule shrinkage ahead of moving spindle pole body","type":"related"},{"name":"increased rate of forward-extending microtubule depolymerization","type":"exact"},{"name":"increased rate of microtubule catastrophe ahead of moving spindle pole body","type":"related"},{"name":"increased rate of microtubule depolymerisation ahead of moving spindle pole body","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving SPB","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0004976"}


id: PBO:0004764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago-nashi homolog (predicted)","termid":"PBO:0004764"}


id: GO:1990138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["PMID:22790009","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection extension","synonyms":[{"name":"neurite extension","type":"narrow"},{"name":"neuron process extension","type":"exact"},{"name":"neuron protrusion extension","type":"exact"},{"name":"neuronal cell projection extension","type":"exact"}],"termid":"GO:1990138"}


id: PBO:0027986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_normal_septum_morphology","termid":"PBO:0027986"}


id: PBO:0042389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member b","termid":"PBO:0042389"}


id: PBO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium channel regulatory subunit Yam8","termid":"PBO:0000253"}


id: GO:0019714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an ester group to a glutamine residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamine esterification (obsolete GO:0019714)","termid":"GO:0019714"}


id: PBO:0089527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase Zwf1","termid":"PBO:0089527"}


id: PBO:0089820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A (predicted)tt","termid":"PBO:0089820"}


id: GO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the inositol 1,4,5-trisphosphate-sensitive calcium-release channel.","definition_xrefs":["GOC:signaling","GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity (obsolete GO:0031586)","synonyms":[{"name":"down regulation of IP3 receptor activity","type":"exact"},{"name":"down-regulation of IP3 receptor activity","type":"exact"},{"name":"downregulation of IP3 receptor activity","type":"exact"},{"name":"inhibition of IP3 receptor activity","type":"narrow"},{"name":"negative regulation of IP3 receptor activity","type":"related"},{"name":"negative regulation of inositol 1,4,5-trisphosphate receptor activity","type":"exact"}],"termid":"GO:0031586"}


id: GO:0006979
data:
  {"annotated_genes":["SJAG_00365","SJAG_03924","SJAG_03303","SJAG_02433","SJAG_02135","SJAG_04953","SJAG_00141","SJAG_03828","SJAG_01162","SJAG_01734","SJAG_03166","SJAG_03653","SJAG_04632","SJAG_04403","SJAG_00996","SJAG_03330","SJAG_02858","SJAG_02945","SJAG_06622","SJAG_01292","SJAG_01084","SJAG_06611","SJAG_04036","SJAG_02592","SJAG_05014","SJAG_02485","SJAG_02249","SJAG_02495","SJAG_04823","SJAG_04125","SJAG_00668","SJAG_05181","SJAG_01216","SJAG_04399","SJAG_01199","SJAG_00027","SJAG_04788","SJAG_02515","SJAG_04311","SJAG_03414","SJAG_03896","SJAG_03886","SJAG_00984","SJAG_06621","SJAG_00419","SJAG_02044","SJAG_03903","SJAG_02573","SJAG_01855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99787,94954,118100,108636,117178,104841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[108735,89943,76643,67860,93322,108740,66778,74896,108738,108736,91916,77339,101646,108734,73032,108737,75345,90643,89844,97397,63742,76560,69921,88308,78806,95749,73386,74739,114272,108739,107603,95323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[89548,91281,89945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:2000815"},{"annotations":[60664,74019,88728,99061,68274,92894,57879,89150,64774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["PMID:12115731","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03886":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05014":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006979","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0061692":null,"GO:2000815":null}}


id: GO:0030755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3,5,7,3',4'-pentahydroxyflavone = S-adenosyl-L-homocysteine + 3-methoxy-5,7,3',4'-tetrahydroxy-flavone.","definition_xrefs":["EC:2.1.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"quercetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:QUERCETIN-3-O-METHYLTRANSFERASE-RXN","RHEA:17673"],"synonyms":[{"name":"S-adenosyl-L-methionine:3,5,7,3',4'-pentahydroxyflavone 3-O-methyltransferase activity","type":"related"},{"name":"flavonoid 3-methyltransferase activity","type":"related"},{"name":"flavonol 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0030755"}


id: PBO:0065788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1 pseudogene 1","termid":"PBO:0065788"}


id: PBO:0077718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 2","termid":"PBO:0077718"}


id: PBO:0038565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABL proto-oncogene 1, non-receptor tyrosine kinase","termid":"PBO:0038565"}


id: MONDO:0013352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-severe speech delay-mild dysmorphism syndrome, also known as intellectual disability with language impairment and with or without autistic features, is adisorder characterized by global developmental delay with moderate to severe speech delay thataffects expressive speech. Most patients have difficulty articulating words. Common signs and symptoms include broad forehead, downslanting palpebral fissures, short nose with broad tip, head appearing too large for the body, frontal hair upsweep, and bulging digit pads anddelatyed gross motor skills. Some patients have autistic features and/or behavioral problems. Congenital malformations may be associated. All reported cases have occurred de novo (without any cases in the family). It is caused by alterations (mutations) in the caused by heterozygous mutation in the FOXP1 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-severe speech delay-mild dysmorphism syndrome","secondary_identifiers":["MEDGEN:862201","DOID:0111331","UMLS:C4013764","OMIM:613670","GARD:12501","Orphanet:391372"],"synonyms":[{"name":"FOXP1 related global developmental delay, intellectual disability and speech defects","type":"related"},{"name":"intellectual disability with language impairment and with or without autistic features","type":"related"},{"name":"intellectual disability-severe speech delay-mild dysmorphism syndrome","type":"exact"},{"name":"mental retardation with language impairment and with or without autistic features","type":"related"}],"termid":"MONDO:0013352","xrefs":{"Monarch":{"xref_id":"0013352"}}}


id: PBO:0083199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene MMS4","termid":"PBO:0083199"}


id: GO:0098593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cup shaped specialization of the cytoskeleton that forms a thin layer located just below the apical mass of mature mucin secretory granules in the cytoplasm of goblet cells of the intestinal epithelium. It consists of an orderly network of intermediate filaments and microtubules. Microtubules are arranged vertically, like barrel staves, along the inner aspect of the theta. Intermediate filaments form two networks: an inner, basketlike network and an outer series of circumferential bundles resembling the hoops of a barrel.","definition_xrefs":["PMID:6541604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"goblet cell theca","termid":"GO:0098593"}


id: FYPO:0002827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"decreased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"decreased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0002827"}


id: PBO:0082225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin involved in ubiquitin-dependent endocytosis; contributes to desensitization of agonist-occupied alpha-factor receptor Ste2p by Rsp5p-independent internalization; PPXY motif-mediated binding of the ubiquitin ligase Rsp5p is not required for adaptation; mutation suppresses the temperature sensitivity of an mck1 rim11 double mutant; SWAT-GFP and mCherry fusion proteins localize to the cytosol; ROG3 has a paralog, ROD1, that arose from the whole genome duplication","termid":"PBO:0082225"}


id: PBO:0003960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, involved in translation (predicted)","termid":"PBO:0003960"}


id: MONDO:0032705
data:
  {"annotated_genes":["SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85858],"is_not":false,"summary":null,"term":"MONDO:0032705"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, epilepsy, and hypomyelination","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618367","GARD:18018","Orphanet:597874","UMLS:C5193057","MEDGEN:1684142"],"synonyms":[{"name":"5,10-methenyltetrahydrofolate synthetase deficiency","type":"exact"},{"name":"MTHFS-related developmental delay-microcephaly-short stature-epilepsy syndrome","type":"exact"},{"name":"NEDMEHM","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, EPILEPSY, AND HYPOMYELINATION","type":"exact"}],"termid":"MONDO:0032705","terms_by_termid":{"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0032705"}}}


id: PBO:0041596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 7","termid":"PBO:0041596"}


id: PR:Q9UTR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- red1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein red1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.03c","synonyms":[{"name":"RNA elimination defective protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-red1","type":"exact"}],"termid":"PR:Q9UTR8"}


id: PBO:0087476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both the ERMES and the SAM complex; component of ERMES complex which acts as a molecular tether between the mitochondria and the ER, necessary for efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex component that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex is often co-localized with peroxisomes and concentrated areas of pyruvate dehydrogenase","termid":"PBO:0087476"}


id: PBO:0081611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 536","termid":"PBO:0081611"}


id: MONDO:0005032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, encapsulated tumor, arising from the follicular cells of the thyroid gland. It may be associated with thyroid hormone secretion but it does not have malignant characteristics.","definition_xrefs":["NCIT:C3502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign thyroid gland neoplasm","termid":"MONDO:0006107"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular thyroid adenoma","secondary_identifiers":["ICDO:8330/0","DOID:6204","SCTID:255033000","SCTID:255034006","DOID:2891","EFO:0000499","HP:0000854"],"synonyms":[{"name":"adenoma of the thyroid","type":"exact"},{"name":"adenoma of the thyroid gland","type":"exact"},{"name":"adenoma of thyroid","type":"exact"},{"name":"adenoma of thyroid gland","type":"exact"},{"name":"adenoma, follicular cell, benign","type":"exact"},{"name":"follicular adenoma","type":"exact"},{"name":"follicular adenoma (morphologic abnormality)","type":"exact"},{"name":"follicular adenoma of the thyroid","type":"exact"},{"name":"follicular adenoma of the thyroid gland","type":"exact"},{"name":"follicular adenoma of thyroid","type":"exact"},{"name":"follicular adenoma of thyroid gland","type":"exact"},{"name":"follicular thyroid adenoma","type":"exact"},{"name":"thyroid adenoma","type":"exact"},{"name":"thyroid adenoma (disease)","type":"exact"},{"name":"thyroid follicle adenoma","type":"exact"},{"name":"thyroid follicular adenoma","type":"exact"},{"name":"thyroid gland adenoma","type":"exact"},{"name":"thyroid gland follicular adenoma","type":"exact"}],"termid":"MONDO:0005032","xrefs":{"Monarch":{"xref_id":"0005032"}}}


id: GO:1904646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["GO_REF:0000071","PMID:23555824","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to amyloid-beta","termid":"GO:1904645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amyloid-beta","synonyms":[{"name":"cellular response to beta-amyloid","type":"exact"},{"name":"cellular response to beta-amyloids","type":"related"}],"termid":"GO:1904646"}


id: PBO:0027882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_dimethylation","termid":"PBO:0027882"}


id: PBO:0068782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 19, pseudogene","termid":"PBO:0068782"}


id: PBO:0029435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_abnormal_germ_tube_morphology","termid":"PBO:0029435"}


id: GO:0043773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) GTP + F420-0 + L-glutamate = GDP + phosphate + F420-1, and (2) GTP + F420-1 + L-glutamate = GDP + phosphate + gamma-F420-2. This is the GTP-dependent successive addition of two L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form F420-0-glutamyl-glutamate (F420-2), with a gamma-linkage between the two glutamates.","definition_xrefs":["PMID:17669425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"coenzyme F420-0 gamma-glutamyl ligase activity","synonyms":[{"name":"F420-0 gamma-glutamyl ligase activity","type":"exact"}],"termid":"GO:0043773"}


id: PBO:0046305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENAH pseudogene 1","termid":"PBO:0046305"}


id: GO:1901809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of capsanthin.","definition_xrefs":["GOC:yaf","MetaCyc:PWY-5174","PMID:10995282","UniPathway:UPA00806","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"capsanthin metabolic process","termid":"GO:1901807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"capsanthin biosynthetic process","synonyms":[{"name":"capsanthin anabolism","type":"exact"},{"name":"capsanthin biosynthesis","type":"exact"},{"name":"capsanthin formation","type":"exact"},{"name":"capsanthin synthesis","type":"exact"}],"termid":"GO:1901809"}


id: MONDO:0859085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked","secondary_identifiers":["MEDGEN:1823953","UMLS:C5774179","OMIM:301094"],"termid":"MONDO:0859085","xrefs":{"Monarch":{"xref_id":"0859085"}}}


id: GO:0009257
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108146,112210],"is_not":false,"summary":null,"term":"GO:0009257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"10-formyltetrahydrofolate metabolic process","termid":"GO:0009256"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"tetrahydrofolate biosynthetic process","termid":"GO:0046654"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"10-formyltetrahydrofolate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"10-formyl-THF biosynthesis","type":"exact"},{"name":"10-formyl-THF biosynthetic process","type":"exact"},{"name":"10-formyltetrahydrofolate anabolism","type":"exact"},{"name":"10-formyltetrahydrofolate biosynthesis","type":"exact"},{"name":"10-formyltetrahydrofolate formation","type":"exact"},{"name":"10-formyltetrahydrofolate synthesis","type":"exact"}],"termid":"GO:0009257","terms_by_termid":{"GO:0009257":null}}


id: PR:Q10410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOM1-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C1F3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.05","secondary_identifiers":["UniProtKB:Q10410"],"synonyms":[{"name":"Spom972h-TOM1L2","type":"exact"}],"termid":"PR:Q10410"}


id: FYPO:0004356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleolus","termid":"FYPO:0003687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to nucleolus","synonyms":[{"name":"increased protein localisation to nucleolus","type":"exact"},{"name":"increased protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0004356"}


id: GO:0070648
data:
  {"annotated_genes":["SJAG_00938","SJAG_04887","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98069,107924,118904],"is_not":false,"summary":null,"term":"GO:0070648"}]},"cv_name":"cellular_component","definition":"An actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins. In fungal cells, myosin motors transport cargo along actin cables toward sites of polarized cell growth; actin cables may play a similar role in pollen tube growth.","definition_xrefs":["PMID:14671023","PMID:16959963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallel actin filament bundle","termid":"GO:0097518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"formin-nucleated actin cable","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"termid":"GO:0070648","terms_by_termid":{"GO:0070648":null}}


id: GO:0034973
data:
  {"annotated_genes":["SJAG_04597","SJAG_03936"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94166,110319],"is_not":false,"summary":null,"term":"GO:0034973"}]},"cv_name":"cellular_component","definition":"A protein complex that contains a protein kinase (Sid2 in S. pombe) and its regulatory subunit (Mob1). The Sid2p-Mob1p kinase complex is a component of the septation initiation network in fission yeast (called the mitotic exit network in S. cerevisiae) and is required for cytokinesis. The analogous complex in S. cerevisiae is called Dbf2p-Mob1p complex.","definition_xrefs":["GOC:vw","PMID:10837231","PMID:15060149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03936":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Sid2-Mob1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dbf2p-Mob1p complex","type":"exact"},{"name":"Sid2-Mob1 kinase complex","type":"exact"},{"name":"Sid2p-Mob1p complex","type":"exact"}],"termid":"GO:0034973","terms_by_termid":{"GO:0034973":null}}


id: PBO:0050334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 36","termid":"PBO:0050334"}


id: PBO:0053061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA associated with SART3 regulation of splicing","termid":"PBO:0053061"}


id: GO:1904886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a beta-catenin destruction complex into its constituent components.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:23169527","GOC:bf","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"beta-catenin destruction complex disassembly","synonyms":[{"name":"23S APC complex disassembly","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex disassembly","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex disassembly","type":"exact"},{"name":"BDC disassembly","type":"exact"},{"name":"beta-catenin degradation complex disassembly","type":"exact"},{"name":"dissociation of beta-catenin degradation complex","type":"exact"}],"termid":"GO:1904886"}


id: PBO:0017968
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YER025W","termid":"PBO:0017968"}


id: PBO:0065276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 1","termid":"PBO:0065276"}


id: MONDO:0958161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is associated with PAX5 P80R mutation.","definition_xrefs":["DOID:0081411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B acute lymphoblastic leukemia with PAX5 P80R mutation","secondary_identifiers":["UMLS:C5855498","MEDGEN:1846082"],"termid":"MONDO:0958161","xrefs":{"Monarch":{"xref_id":"0958161"}}}


id: PBO:0086961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of septin dynamics; involved in the regulation of septin dynamics at bud neck after mitotic entry, likely by stabilizing septin structure; regulated at post-translational level by cell cycle dependent phosphorylation; likely phosphorylated by Cdc28p and dephosphorylated by Cdc14p before cytokinesis; high-copy suppressor of synthetic lethality of sis2 sit4 double mutant; VHS2 has a paralog, MLF3, that arose from the whole genome duplication","termid":"PBO:0086961"}


id: MONDO:0020449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the inferior vena cava","termid":"MONDO:0019830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent eustachian valve","secondary_identifiers":["UMLS:C5190784","MEDGEN:1678657","GARD:19661","Orphanet:99120"],"termid":"MONDO:0020449","xrefs":{"Monarch":{"xref_id":"0020449"}}}


id: PBO:0002834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA Elimiation Defective","termid":"PBO:0002834"}


id: PBO:0064859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R15B and PIK3C2B antisense RNA 1","termid":"PBO:0064859"}


id: MONDO:0024607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital muscular dystrophy characterized by onset of progressive muscle weakness in early childhood with autosomal recessive inheritance that has material basis in homozygous or compound heterozygous mutation in the INPP5K gene (607875) on chromosome 17p13.","definition_xrefs":["DOID:0080197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy with cataracts and intellectual disability","secondary_identifiers":["MEDGEN:1382291","UMLS:C4479410","OMIM:617404","Orphanet:662184"],"synonyms":[{"name":"MDCCAID","type":"related"},{"name":"muscular dystrophy, congenital, with cataracts and intellectual disability","type":"related"}],"termid":"MONDO:0024607","xrefs":{"Monarch":{"xref_id":"0024607"}}}


id: MONDO:0800026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disease due to a severely impaired central autonomic control of breathing and dysfunction of the autonomous nervous system. The incidence is estimated to be at 1 of 200 000 livebirths. A heterozygous mutation of PHOX-2B gene is found in 90% of the patients. Association with a Hirschsprung's disease is observed in 16% of the cases. Despite a high mortality rate and a lifelong dependence to mechanical ventilation, the long-term outcome of CCHS should be ultimately improved by multidisciplinary and coordinated follow-up of the patients.","definition_xrefs":["Orphanet:661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"central hypoventilation syndrome, congenital","termid":"MONDO:0800031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"central hypoventilation syndrome, congenital, 1, with or without Hirschsprung disease","secondary_identifiers":["GARD:8535","MEDGEN:1794285","icd11.foundation:1750742010","MedDRA:10066131","ICD10CM:G47.3","SCTID:230499002","NCIT:C98889","DOID:0060731","MedDRA:10007982","UMLS:C5562075","OMIM:209880"],"synonyms":[{"name":"CCHS","type":"exact"},{"name":"CCHS with Hirschsprung disease","type":"related"},{"name":"Haddad syndrome","type":"related"},{"name":"Ondine curse","type":"exact"},{"name":"Ondine curse (formerly)","type":"related"},{"name":"Ondine curse, congenital","type":"exact"},{"name":"Ondine syndrome","type":"exact"},{"name":"Ondine's curse (formerly)","type":"related"},{"name":"Ondine-Hirschsprung disease","type":"related"},{"name":"autonomic control, congenital failure of","type":"exact"},{"name":"central congenital hypoventilation syndrome","type":"exact"},{"name":"central hypoventilation syndrome, congenital","type":"related"},{"name":"congenital Ondine curse","type":"exact"},{"name":"congenital central alveolar hypoventilation syndrome","type":"exact"},{"name":"congenital central hypoventilation","type":"exact"},{"name":"congenital central hypoventilation syndrome","type":"exact"},{"name":"congenital failure of autonomic control","type":"related"},{"name":"idiopathic congenital central alveolar hypoventilation","type":"related"},{"name":"primary alveolar hypoventilation","type":"related"}],"termid":"MONDO:0800026","xrefs":{"Monarch":{"xref_id":"0800026"}}}


id: PBO:0039965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 8","termid":"PBO:0039965"}


id: PBO:0056182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFG antisense RNA 1","termid":"PBO:0056182"}


id: PBO:0076958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 1","termid":"PBO:0076958"}


id: GO:0045321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte activation","secondary_identifiers":["Wikipedia:Immunologic_activation"],"synonyms":[{"name":"immune cell activation","type":"exact"},{"name":"leucocyte activation","type":"exact"}],"termid":"GO:0045321"}


id: PBO:0072519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 48","termid":"PBO:0072519"}


id: MONDO:0009277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of congenital glaucoma caused by mutation(s) in the CYP1B1 gene, encoding cytochrome P450 1B1.","definition_xrefs":["NCIT:C148260"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hydrophthalmos (obsolete MONDO:0006788)","termid":"MONDO:0006788"},{"relation_name":"is_a","term_name":"CYP1B1-related glaucoma with or without anterior segment dysgenesis","termid":"MONDO:0800472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3A","secondary_identifiers":["GARD:18224","ICD9:743.21","MEDGEN:383912","DOID:11211","OMIM:231300","Orphanet:98976","UMLS:C1856439"],"synonyms":[{"name":"GLC3A","type":"related"},{"name":"Primary Congenital glaucoma 3A","type":"exact"},{"name":"buphthalmos","type":"broad"},{"name":"glaucoma 3, primary congenital, A","type":"related"},{"name":"glaucoma 3, primary congenital, type a","type":"exact"},{"name":"glaucoma 3A, primary open angle, congenital, juvenile, or adult onset","type":"exact"},{"name":"glaucoma, congenital","type":"related"},{"name":"glaucoma, primary open angle, adult-onset","type":"related"},{"name":"glaucoma, primary open angle, juvenile-onset","type":"related"},{"name":"simple buphthalmos","type":"exact"}],"termid":"MONDO:0009277","xrefs":{"Monarch":{"xref_id":"0009277"}}}


id: MONDO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia resulting from dehydration.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"dehydration polycythemia","secondary_identifiers":["MEDGEN:163544","UMLS:C0856815","NCIT:C27310","DOID:2833"],"termid":"MONDO:0002437","xrefs":{"Monarch":{"xref_id":"0002437"}}}


id: PBO:0059274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 3","termid":"PBO:0059274"}


id: PBO:0087819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (40 kDa); involved in RNA polymerase II transcription initiation, similar to histone H3 with atypical histone fold motif of Spt3-like transcription factors","termid":"PBO:0087819"}


id: GO:0042330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to an external stimulus.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taxis","secondary_identifiers":["Wikipedia:Taxis"],"synonyms":[{"name":"directed movement in response to stimulus","type":"exact"}],"termid":"GO:0042330"}


id: PBO:0058902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12120","termid":"PBO:0058902"}


id: MONDO:0010643
data:
  {"annotated_genes":["SJAG_01748","SJAG_05979","SJAG_01013","SJAG_03905","SJAG_03453","SJAG_01349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87115,86961,86962,86959,86960,87114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"A clonal (malignant) hematopoietic disorder with an acute onset, affecting the bone marrow and the peripheral blood. The malignant cells show minimal differentiation and are called blasts, either myeloid blasts (myeloblasts) or lymphoid blasts (lymphoblasts).","definition_xrefs":["NCIT:C9300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acute leukemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:43225","DOID:12603","NCIT:C9298","UMLS:C0085669","ICD9:208.0","SCTID:91855006","EFO:1000068","HP:0002488","MESH:C564112","ICD9:208.00","ICDO:9801/3"],"synonyms":[{"name":"acute leukaemia (disease)","type":"exact"},{"name":"acute leukemia","type":"exact"},{"name":"acute leukemia (disease)","type":"exact"},{"name":"leukemia, acute, X-linked","type":"related"},{"name":"stem cell leukaemia","type":"related"},{"name":"stem cell leukaemia (disease)","type":"related"},{"name":"stem cell leukemia","type":"related"},{"name":"stem cell leukemia (disease)","type":"related"}],"termid":"MONDO:0010643","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0010643"}}}


id: PBO:0051045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-14 (non-functional)","termid":"PBO:0051045"}


id: PBO:0086635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YGL036W is not an essential gene","termid":"PBO:0086635"}


id: FYPO:0008206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during hypoxic stress.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during hypoxia","termid":"FYPO:0008206"}


id: GO:0075330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of formation of structure involved in a symbiotic process","termid":"GO:0044149"},{"relation_name":"is_a","term_name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"},{"relation_name":"positively_regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075330"}


id: PBO:0030127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_molybdenum_level","termid":"PBO:0030127"}


id: PBO:0079145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 7","termid":"PBO:0079145"}


id: GO:0160156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process that results in the fusion of secretory granules with lysosomes to form crinosomes.","definition_xrefs":["PMID:35452619","PMID:29066608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"crinophagy","termid":"GO:0160155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"secretory granule-lysosome fusion","termid":"GO:0160156"}


id: GO:1904593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to prostaglandin.","definition_xrefs":["GOC:TermGenie","PMID:21445266","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"prostaglandin binding","termid":"GO:1904593"}


id: GO:1990137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RH + ROOH = ROH + ROH.","definition_xrefs":["EC:1.11.2.3","PMID:19467604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"plant seed peroxygenase activity","secondary_identifiers":["MetaCyc:RXN-11819"],"synonyms":[{"name":"peroxygenase activity","type":"broad"},{"name":"plant seed peroxidase activity","type":"related"}],"termid":"GO:1990137"}


id: GO:1905246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:21745575","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic-type peptidase activity (obsolete GO:1905246)","synonyms":[{"name":"down regulation of aspartic-type peptidase activity","type":"exact"},{"name":"down-regulation of aspartic-type peptidase activity","type":"exact"},{"name":"downregulation of aspartic-type peptidase activity","type":"exact"},{"name":"inhibition of aspartic-type peptidase activity","type":"narrow"},{"name":"pepsin inhibitor","type":"related"}],"termid":"GO:1905246"}


id: MONDO:1012325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"premature senesence, non-human animal","termid":"MONDO:1011784"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature senesence, pig","secondary_identifiers":["OMIA:001213-9823"],"termid":"MONDO:1012325","xrefs":{"Monarch":{"xref_id":"1012325"}}}


id: GO:0071173
data:
  {"annotated_genes":["SJAG_04999","SJAG_01837","SJAG_04699","SJAG_02451","SJAG_04259","SJAG_04884","SJAG_04126","SJAG_01330","SJAG_01082","SJAG_03353","SJAG_00883","SJAG_02169","SJAG_02336","SJAG_03126","SJAG_01297","SJAG_01679","SJAG_03327","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107032,114072,115709,113584,90477,111757,99376,108054,103681],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[106115,114302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[75000,116477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[99220,101586,109708,106117,115363,114305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[93959],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[113589],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[116484],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101124],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that delays the metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072486"],"synonyms":[{"name":"SAC","type":"broad"},{"name":"signal transduction involved in spindle assembly checkpoint","type":"exact"},{"name":"spindle assembly checkpoint","type":"exact"}],"termid":"GO:0071173","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0027267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_pheromone","termid":"PBO:0027267"}


id: GO:0043803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: demethylspheroidene + S-adenosyl-L-methionine = H+ + S-adenosyl-L-homocysteine + spheroidene.","definition_xrefs":["PMID:7358679","RHEA:30903","PMID:12664193","PMID:12770713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxyneurosporene-O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.210"],"synonyms":[{"name":"1-HO-carotenoid methylase","type":"related"},{"name":"1-hydroxycarotenoid O-methylase","type":"related"},{"name":"1-hydroxycarotenoid methylase","type":"related"},{"name":"demethylspheroidene O-methyltransferase","type":"related"}],"termid":"GO:0043803"}


id: GO:0016468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out). Found in eukaryotic mitochondria and chloroplasts and in bacteria.","definition_xrefs":["TC:3.A.2.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-translocating F-type ATPase activity (obsolete GO:0016468)","synonyms":[{"name":"ATP synthase","type":"broad"},{"name":"sodium-translocating F-type ATPase activity","type":"exact"}],"termid":"GO:0016468"}


id: PBO:0074402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 1","termid":"PBO:0074402"}


id: PBO:0090495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA branch migration helicase Irc3","termid":"PBO:0090495"}


id: PBO:0030396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus:cytoplasm_ratio","termid":"PBO:0030396"}


id: PBO:0077891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein","termid":"PBO:0077891"}


id: MONDO:0800433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cancer, familial, susceptibility to, 1","secondary_identifiers":["MEDGEN:393561","UMLS:C2676678"],"termid":"MONDO:0800433","xrefs":{"Monarch":{"xref_id":"0800433"}}}


id: PBO:0072365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 51","termid":"PBO:0072365"}


id: PBO:0027601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_morphology","termid":"PBO:0027601"}


id: PBO:0077310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 47","termid":"PBO:0077310"}


id: PBO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 2","termid":"PBO:0060780"}


id: CHEBI:16761
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP","termid":"CHEBI:16761"}


id: PBO:0054311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1703","termid":"PBO:0054311"}


id: FYECO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dethiobiotin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ dethiobiotin","synonyms":[{"name":"desthiobiotin added","type":"exact"}],"termid":"FYECO:0000193"}


id: MOD:00293
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-serine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-serinyl tetrairon tetrasulfide","synonyms":[{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(O3-serinyliron)","type":"exact"},{"name":"tris-L-cysteinyl L-serinyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00293"}


id: GO:0032289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by an oligodendrocyte in the central nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin assembly","termid":"GO:0032288"},{"relation_name":"part_of","term_name":"central nervous system myelination","termid":"GO:0022010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"central nervous system myelin formation","synonyms":[{"name":"central nervous system myelin sheath formation","type":"exact"},{"name":"myelin formation in central nervous system","type":"exact"}],"termid":"GO:0032289"}


id: MONDO:0022749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A abnormal, congenital formation or mark on the skin or neighboring mucosa that does not show neoplastic growth.","definition_xrefs":["NCIT:C3937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"non-neoplastic nevus","secondary_identifiers":["MEDGEN:78119","ICD9:448.1","SCTID:195381005","UMLS:C0265027"],"synonyms":[{"name":"Non-Neoplastic Nevus","type":"related"},{"name":"Non-neoplastic nevus","type":"related"},{"name":"non-neoplastic nevus","type":"exact"}],"termid":"MONDO:0022749","xrefs":{"Monarch":{"xref_id":"0022749"}}}


id: SO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase II.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_II_TATA_box","synonyms":[{"name":"RNA polymerase II TATA box","type":"exact"}],"termid":"SO:0001661"}


id: PBO:0060263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenic factor 6","termid":"PBO:0060263"}


id: GO:0071087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha11-beta1 integrin complex bound to a type I collagen.","definition_xrefs":["PMID:10464311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha11-beta1 integrin-collagen type I complex","synonyms":[{"name":"ITGA11-ITGB1-COL1A1 complex","type":"narrow"}],"termid":"GO:0071087"}


id: MONDO:0022998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"distal arthrogryposis Moore weaver type","secondary_identifiers":["MESH:C536814","UMLS:C2931342","MEDGEN:419054","GARD:1884"],"synonyms":[{"name":"Moore Weaver syndrome","type":"related"}],"termid":"MONDO:0022998","xrefs":{"Monarch":{"xref_id":"0022998"}}}


id: GO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell fate commitment","termid":"GO:0061230"}


id: PBO:0017065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA 12/snR99","termid":"PBO:0017065"}


id: GO:0006560
data:
  {"annotated_genes":["SJAG_01903","SJAG_00660","SJAG_03505","SJAG_00495","SJAG_02235","SJAG_03398","SJAG_00120","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78046,113009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[90638,66913,64167,77568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[77758,69879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[107352],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000214"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00495":null,"SJAG_00660":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03398":null,"SJAG_03457":null,"SJAG_03505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"proline metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"proline metabolism","type":"exact"}],"termid":"GO:0006560","terms_by_termid":{"GO:0010121":null,"GO:0010133":null,"GO:0055129":null,"GO:2000214":null}}


id: PATO:0001983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's two basal lobes being united together.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perfoliate","termid":"PATO:0001983"}


id: FYPO:0006104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of retrotransposon integration is decreased.","definition_xrefs":["PMID:26358720","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased retrotransposon integration","synonyms":[{"name":"decreased retrotransposon integration during mitotic cell cycle","type":"related"},{"name":"decreased retrotransposon integration during vegetative growth","type":"exact"},{"name":"decreased transposon integration involved in RNA-mediated transposition","type":"exact"},{"name":"reduced retrotransposon integration","type":"exact"}],"termid":"FYPO:0006104"}


id: PBO:0018248
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SPO13","termid":"PBO:0018248"}


id: MONDO:0003726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast adenosis characterized by the presence of extensive apocrine metaplasia.","definition_xrefs":["NCIT:C5198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proliferative fibrocystic change of the breast","termid":"MONDO:0003724"},{"relation_name":"is_a","term_name":"breast adenosis","termid":"MONDO:0003725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apocrine adenosis of breast","secondary_identifiers":["UMLS:C1332314","DOID:5999","MEDGEN:231072"],"synonyms":[{"name":"apocrine adenosis of breast","type":"exact"},{"name":"apocrine adenosis of the breast","type":"exact"},{"name":"breast apocrine adenosis","type":"exact"}],"termid":"MONDO:0003726","xrefs":{"Monarch":{"xref_id":"0003726"}}}


id: PBO:0087132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein involved in asymmetric localization of ASH1 mRNA; represses translation of ASH1 mRNA, an effect reversed by Yck1p-dependent phosphoryation; regulates telomere position effect and length; similarity to hnRNP-K","termid":"PBO:0087132"}


id: GO:1900944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of isoprene metabolic process","synonyms":[{"name":"regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"regulation of hemiterpene metabolic process","type":"exact"},{"name":"regulation of hemiterpene metabolism","type":"exact"},{"name":"regulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900944"}


id: PBO:0062176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily M member 1","termid":"PBO:0062176"}


id: PBO:0040454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 11B (putative)","termid":"PBO:0040454"}


id: MONDO:1012095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia, non-human animal","termid":"MONDO:1011689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia, dog","secondary_identifiers":["OMIA:000430-9615"],"termid":"MONDO:1012095","xrefs":{"Monarch":{"xref_id":"1012095"}}}


id: PBO:0074156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E4","termid":"PBO:0074156"}


id: GO:0052506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont ethylene-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway (obsolete GO:0052506)","synonyms":[{"name":"activation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052506"}


id: PBO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in the current viewer tco1 gene is hidden behind SPNCRNA.600","termid":"PBO:0002126"}


id: PBO:0065363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 4","termid":"PBO:0065363"}


id: MONDO:1010902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disorders characterized by characterized by the accumulation of unesterified cholesterol and glycolipids in cellular lysosomes and late endosomes that occurs in cats due to a mutation in the NPC2 gene.","definition_xrefs":["PMID:37458497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, domestic cat","termid":"MONDO:1010861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease, NPC2-related, domestic cat","secondary_identifiers":["OMIA:002065-9685"],"synonyms":[{"name":"Niemann-Pick disease, type C2, domestic cat","type":"related"}],"termid":"MONDO:1010902","xrefs":{"Monarch":{"xref_id":"1010902"}}}


id: MOD:00026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-threonine.","definition_xrefs":["DeltaMass:0","RESID:AA0017","PubMed:6692818","ChEBI:30013","PubMed:2989287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine residue","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanoic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"L-threo-threonine","type":"exact"},{"name":"L-threonine","type":"exact"},{"name":"Thr","type":"exact"},{"name":"alpha-amino-beta-hydroxybutyric acid","type":"exact"},{"name":"beta-methylserine","type":"exact"}],"termid":"MOD:00026"}


id: PBO:0039514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 2","termid":"PBO:0039514"}


id: PR:P87136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.05","synonyms":[{"name":"Spom972h-SPAC57A7.05","type":"exact"}],"termid":"PR:P87136"}


id: GO:0030010
data:
  {"annotated_genes":["SJAG_03126","SJAG_01901","SJAG_02651","SJAG_04522","SJAG_00845","SJAG_04322","SJAG_00514","SJAG_04653","SJAG_00594","SJAG_04724","SJAG_00317","SJAG_03596","SJAG_00030","SJAG_03581","SJAG_02737","SJAG_03705","SJAG_03453","SJAG_04509","SJAG_03486","SJAG_01456","SJAG_02536","SJAG_02838","SJAG_04624","SJAG_01373","SJAG_03625","SJAG_02695","SJAG_00140","SJAG_01794","SJAG_00216","SJAG_03754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70565,78086,79819,90599,92028,93236,96974,114609],"is_not":false,"summary":null,"term":"GO:0030010"},{"annotations":[116289,117716,99527,110557,106652,103278,87801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[92346,119198,104441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061171"},{"annotations":[116752,76122,104663,104332,96747],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000132"},{"annotations":[90717],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[112270,103487,107412],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061173"},{"annotations":[107413,116393],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[94342,111762],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000114"}]},"cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00140":null,"SJAG_00216":null,"SJAG_00317":null,"SJAG_00514":null,"SJAG_00594":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_01456":null,"SJAG_01794":null,"SJAG_01901":null,"SJAG_02536":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02838":null,"SJAG_03126":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03705":null,"SJAG_03754":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04624":null,"SJAG_04653":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0000283","GO:0030468"],"synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"narrow"},{"name":"cell polarization","type":"exact"}],"termid":"GO:0030010","terms_by_termid":{"GO:0000132":null,"GO:0030010":null,"GO:0051523":null,"GO:0061171":null,"GO:0061173":null,"GO:1904846":null,"GO:2000114":null,"GO:2000784":null}}


id: PBO:0052442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 2","termid":"PBO:0052442"}


id: PBO:0012257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteiasome complex subunit Ecm29","termid":"PBO:0012257"}


id: PBO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 2","termid":"PBO:0043052"}


id: GO:0033640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to osmotic stress (obsolete GO:0033640)","termid":"GO:0033640"}


id: PBO:0017956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing (predicted)","termid":"PBO:0017956"}


id: GO:1903092
data:
  {"annotated_genes":["SJAG_02962","SJAG_03652","SJAG_02152","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89892,89893,117283,118561],"is_not":false,"summary":null,"term":"GO:1903092"}]},"cv_name":"biological_process","definition":"The process in which pyridoxine is transported across a membrane.","definition_xrefs":["GO_REF:0000069","PMID:15701794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine transport","termid":"GO:0031923"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"pyridoxine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903092","terms_by_termid":{"GO:1903092":null}}


id: GO:0003953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + H2O = ADP-D-ribose + nicotinamide + H+.","definition_xrefs":["PMID:11866528","RHEA:16301","PMID:7805847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"NAD+ nucleosidase activity","secondary_identifiers":["EC:3.2.2.5","MetaCyc:RXN-13859"],"synonyms":[{"name":"DPNase activity","type":"exact"},{"name":"NAD glycohydrolase activity","type":"exact"},{"name":"NAD nucleosidase activity","type":"exact"},{"name":"NAD(+) glycohydrolase activity","type":"exact"},{"name":"NADase activity","type":"exact"},{"name":"beta-NAD(+) glycohydrolase activity","type":"exact"},{"name":"diphosphopyridine nucleosidase activity","type":"exact"},{"name":"nicotinamide adenine dinucleotide glycohydrolase activity","type":"exact"},{"name":"nicotinamide adenine dinucleotide nucleosidase activity","type":"exact"}],"termid":"GO:0003953"}


id: GO:1900957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 17-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900956"},{"relation_name":"is_a","term_name":"negative regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900960"},{"relation_name":"negatively_regulates","term_name":"17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900957"}


id: FYPO:0004311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to CENP-A containing chromatin","synonyms":[{"name":"abnormal protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"abnormal protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to centromeric core region chromatin","type":"exact"}],"termid":"FYPO:0004311"}


id: PBO:0056329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 10","termid":"PBO:0056329"}


id: PBO:0052830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 223, pseudogene","termid":"PBO:0052830"}


id: MONDO:0005736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eastern equine encephalitis (EEE) is an acute arboviral infection caused by an alphavirus of the Togaviridae family transmitted by an infected mosquito, that is characterized by the onset of flulike symptoms including fever, chills, weakness, headache, vomiting, abdominal pain with diarrhea, myalgia, leucocytosis, and hematuria, rapidly progressing to diffuse central nervous system (CNS) involvement with confusion, somnolence, or even coma. Seizures, which may progress to status epilepticus and neurologic sequelae, cranial nerve palsies, and photophobia may occur. EEE is associated with a high rate of morbidity and mortality.","definition_xrefs":["Orphanet:83594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eastern equine encephalitis","secondary_identifiers":["EFO:0007242","MEDGEN:102258","ICD10CM:A83.2","DOID:10841","MedDRA:10014587","UMLS:C0153065","icd11.foundation:682536148","ICD9:062.2","GARD:10821","MESH:D020242"],"synonyms":[{"name":"EEE","type":"related"},{"name":"Eastern equine encephalomyelitis","type":"exact"},{"name":"Neuroinvasive Eastern equine encephalitis virus infection","type":"exact"}],"termid":"MONDO:0005736","xrefs":{"Monarch":{"xref_id":"0005736"}}}


id: PBO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase (predicted)","termid":"PBO:0002519"}


id: GO:0000723
data:
  {"annotated_genes":["SJAG_03685","SJAG_06597","SJAG_05105","SJAG_01377","SJAG_01677","SJAG_05353","SJAG_01832","SJAG_05173","SJAG_05979","SJAG_03843","SJAG_02212","SJAG_01605","SJAG_04586","SJAG_04372","SJAG_00939","SJAG_00429","SJAG_03780","SJAG_00640","SJAG_01410","SJAG_04245","SJAG_04863","SJAG_02079","SJAG_01068","SJAG_04266","SJAG_03855","SJAG_06642","SJAG_04183","SJAG_03092","SJAG_02362","SJAG_02194","SJAG_03624","SJAG_00559","SJAG_05372","SJAG_02563","SJAG_02771","SJAG_00364","SJAG_05373","SJAG_04150","SJAG_03720","SJAG_01777","SJAG_03026","SJAG_01263","SJAG_01864","SJAG_03722","SJAG_02116","SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58511,69949,70659,71177,71389,78104,78590,79040,88869,91190,98852,98980,100646,103946,105756,107557,107835,109182,109360,111328,112630,116065,116659],"is_not":false,"summary":null,"term":"GO:0000723"},{"annotations":[96959],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"},{"annotations":[79538,89513],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031848"},{"annotations":[76665],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[110170,62991,91593,76661,99509,115754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016233"},{"annotations":[112749,112746,111531,112747,79940,95944,112750,112748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"},{"annotations":[80006,113627,70228,79938,115756,69327,90393,107917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[79535,73741,91595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010833"}]},"cv_name":"biological_process","definition":"Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins, the length of telomeric DNA and the replication and repair of the DNA. These processes includes those that shorten, lengthen, replicate and repair the telomeric DNA sequences.","definition_xrefs":["GOC:elh","GOC:BHF","GOC:rl","GOC:BHF_telomere","PMID:11092831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00559":null,"SJAG_00640":null,"SJAG_00939":null,"SJAG_01068":null,"SJAG_01263":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01777":null,"SJAG_01832":null,"SJAG_01864":null,"SJAG_02079":null,"SJAG_02116":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03092":null,"SJAG_03624":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03855":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04245":null,"SJAG_04266":null,"SJAG_04372":null,"SJAG_04586":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"telomere maintenance","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-157579"],"synonyms":[{"name":"regulation of telomere length","type":"related"}],"termid":"GO:0000723","terms_by_termid":{"GO:0000722":null,"GO:0000723":null,"GO:0007004":null,"GO:0010833":null,"GO:0016233":null,"GO:0031848":null,"GO:0032210":null,"GO:0032215":null}}


id: PBO:0018146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome assembly protein eis1","termid":"PBO:0018146"}


id: PBO:0078537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 29","termid":"PBO:0078537"}


id: GO:0042318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"penicillin metabolic process","termid":"GO:0042316"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"penicillin biosynthetic process","synonyms":[{"name":"penicillin anabolism","type":"exact"},{"name":"penicillin biosynthesis","type":"exact"},{"name":"penicillin formation","type":"exact"},{"name":"penicillin synthesis","type":"exact"}],"termid":"GO:0042318"}


id: MONDO:1010691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"},{"relation_name":"is_a","term_name":"cardiomyopathy, cattle","termid":"MONDO:1010443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, cattle","secondary_identifiers":["OMIA:000038-9913"],"termid":"MONDO:1010691","xrefs":{"Monarch":{"xref_id":"1010691"}}}


id: GO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its periplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of external side of plasma membrane","termid":"GO:0031232"},{"relation_name":"part_of","term_name":"periplasmic side of plasma membrane","termid":"GO:0098567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005886","GO:0009986","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of periplasmic side of plasma membrane","secondary_identifiers":["GO:0031238"],"synonyms":[{"name":"extrinsic to external leaflet of plasma membrane, in periplasmic space","type":"narrow"},{"name":"extrinsic to external side of plasma membrane, in periplasmic space","type":"narrow"}],"termid":"GO:0031236"}


id: PBO:0046386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EOLA2 divergent transcript","termid":"PBO:0046386"}


id: FYPO:0009096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing xylose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0001985","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on xylose carbon source","synonyms":[{"name":"increased growth on xylose carbon source","type":"broad"},{"name":"increased vegetative cell growth on xylose carbon source","type":"exact"}],"termid":"FYPO:0009096"}


id: SO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' five prime splice site region of the donor RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_site","termid":"SO:0001420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_donor_site","synonyms":[{"name":"5 prime trans splice site","type":"related"},{"name":"trans splice donor site","type":"exact"},{"name":"trans-splice donor site","type":"exact"}],"termid":"SO:0000707"}


id: PBO:0062559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 6 (gene/pseudogene)","termid":"PBO:0062559"}


id: GO:1904989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell activation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:bc","GOC:BHF_miRNA","PMID:24255059","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"is_a","term_name":"regulation of endothelial cell activation","termid":"GO:1904987"},{"relation_name":"positively_regulates","term_name":"endothelial cell activation","termid":"GO:0042118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell activation","synonyms":[{"name":"activation of endothelial cell activation","type":"narrow"},{"name":"up regulation of endothelial cell activation","type":"exact"},{"name":"up-regulation of endothelial cell activation","type":"exact"},{"name":"upregulation of endothelial cell activation","type":"exact"}],"termid":"GO:1904989"}


id: MONDO:0014606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome is a rare, genetic, syndromic intellectual disability disorder characterized by craniofacial dysmorphism (microcephaly, hypotonic facies, strabismus, long and flat malar region, posteriorly rotated ears, flat nasal bridge with broad nasal tip, short philtrum, thin vermillion border, open mouth with down-turned corners, high arched palate, pointed chin), global developmental delay, intellectual disability and variable neurobehavioral abnormalities (autism spectrum disorder, aggressiveness, self injury). Additional features include vision abnormalities and variable sensorineural hearing loss, as well as short stature, hypotonia and gastrointestinal manifestations (e.g. poor feeding, gastroesophageal reflux, constipation).","definition_xrefs":["Orphanet:468678"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome","secondary_identifiers":["MEDGEN:897984","UMLS:C4225351","GARD:13774","DOID:0070067","OMIM:616364"],"synonyms":[{"name":"MRD37","type":"exact"},{"name":"WHITE-Sutton syndrome","type":"related"},{"name":"WHSUS","type":"exact"},{"name":"White-Sutton syndrome","type":"related"},{"name":"autosomal dominant intellectual disability 37","type":"exact"},{"name":"autosomal dominant mental retardation 37","type":"exact"},{"name":"intellectual disability, autosomal dominant 37","type":"related"},{"name":"intellectual disability, autosomal dominant type 37","type":"exact"},{"name":"intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome","type":"exact"},{"name":"mental retardation, autosomal dominant 37","type":"related"},{"name":"mental retardation, autosomal dominant type 37","type":"exact"}],"termid":"MONDO:0014606","xrefs":{"Monarch":{"xref_id":"0014606"}}}


id: PBO:0076304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2","termid":"PBO:0076304"}


id: PBO:0039157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 4","termid":"PBO:0039157"}


id: PBO:0041604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 1","termid":"PBO:0041604"}


id: PBO:0066925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 227","termid":"PBO:0066925"}


id: PBO:0081291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 74","termid":"PBO:0081291"}


id: PBO:0027583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_autophagy_during_nitrogen_starvation","termid":"PBO:0027583"}


id: GO:0045505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intermediate chain of the dynein complex.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dynein intermediate chain binding","termid":"GO:0045505"}


id: PBO:0109014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 15, pseudogene","termid":"PBO:0109014"}


id: GO:0033707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxymugineic acid + NAD(P)+ = 3''-deamino-3''-oxonicotianamine + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3''-deamino-3''-oxonicotianamine reductase activity","secondary_identifiers":["MetaCyc:1.1.1.285-RXN"],"synonyms":[{"name":"2'-deoxymugineic acid:NAD(P)+ 3''-oxidoreductase activity","type":"related"}],"termid":"GO:0033707"}


id: GO:0061599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction adenylyl-molybdopterin + molybdate = molybdenum cofactor + AMP.","definition_xrefs":["GOC:dph","EC:2.10.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"molybdopterin molybdotransferase activity","secondary_identifiers":["Reactome:R-HSA-947531","RHEA:35047"],"termid":"GO:0061599"}


id: MONDO:0032631
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86008],"is_not":false,"summary":null,"term":"MONDO:0032631"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 27","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112090","GARD:18375","MEDGEN:1648481","OMIM:618248","UMLS:C4748826"],"synonyms":[{"name":"MC1DN27","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 27","type":"related"}],"termid":"MONDO:0032631","terms_by_termid":{"MONDO:0032631":null},"xrefs":{"Monarch":{"xref_id":"0032631"}}}


id: MONDO:0012159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung cancer","termid":"MONDO:0008903"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer susceptibility 1","secondary_identifiers":["MEDGEN:373250","OMIM:608935","UMLS:C1837089"],"synonyms":[{"name":"LNCR1","type":"exact"},{"name":"lung cancer susceptibility","type":"exact"},{"name":"lung cancer susceptibility 1","type":"exact"}],"termid":"MONDO:0012159","xrefs":{"Monarch":{"xref_id":"0012159"}}}


id: PBO:0066555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 18","termid":"PBO:0066555"}


id: PR:Q10320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 165 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00979","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDT1-like protein C17G8.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.08c","secondary_identifiers":["UniProtKB:Q10320"],"synonyms":[{"name":"Spom972h-TMEM165","type":"exact"}],"termid":"PR:Q10320"}


id: PBO:0063259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 5","termid":"PBO:0063259"}


id: PBO:0003650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S28 (predicted)","termid":"PBO:0003650"}


id: PBO:0052295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 4, pre-mRNA splicing factor","termid":"PBO:0052295"}


id: PBO:0088680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi mannan polymerase I complex subunit Anp1","termid":"PBO:0088680"}


id: MONDO:0021394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the vagina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of vagina","secondary_identifiers":["ICD9:623.7","NCIT:C3664","MEDGEN:56378","icd11.foundation:1664143745","SCTID:29609001","UMLS:C0156390","ICD10CM:N84.2"],"synonyms":[{"name":"polyp of the vagina","type":"exact"},{"name":"polyp, vaginal, benign","type":"exact"},{"name":"vagina polyp","type":"exact"},{"name":"vaginal polyp","type":"exact"}],"termid":"MONDO:0021394","xrefs":{"Monarch":{"xref_id":"0021394"}}}


id: GO:0071718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of icosanoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Icosanoids are unsaturated C20 fatty acids and skeletally related compounds.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sodium-independent icosanoid transport","synonyms":[{"name":"sodium-independent eicosanoid transport","type":"exact"}],"termid":"GO:0071718"}


id: PBO:0081205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 7","termid":"PBO:0081205"}


id: PBO:0043479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 2","termid":"PBO:0043479"}


id: PBO:0116592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 166, pseudogene","termid":"PBO:0116592"}


id: PBO:0050712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPB1 associated protein 1","termid":"PBO:0050712"}


id: GO:0047554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-2H-pyran-4,6-dicarboxylate + H2O = 4-carboxy-2-hydroxyhexa-2,4-dienedioate + H+.","definition_xrefs":["EC:3.1.1.57","RHEA:10644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"2-pyrone-4,6-dicarboxylate lactonase activity","secondary_identifiers":["MetaCyc:RXN-2462","KEGG_REACTION:R04277"],"synonyms":[{"name":"2-pyrone-4,6-dicarboxylate lactonohydrolase activity","type":"related"}],"termid":"GO:0047554"}


id: PBO:0113083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic 5' exoribonuclease; transcriptomics wide distributive exonuclease; involved in cytoplasmic mRNA degradation, turnover of tRNA introns and processing of spliceosomal introns; required for the final 5'-end processing of 25S rRNA; minor contributor to No-Go Decay and the unfolded protein response; decapping protein involved in surveillance and removal of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear mRNAs (NAD-RNAs); sequence similarity to Rai1p","termid":"PBO:0113083"}


id: GO:0103071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA = formyl-CoA + a 2-methyl branched 2,3,4-saturated fatty aldehyde.","definition_xrefs":["GOC:pz","EC:4.1.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA lyase activity (obsolete GO:0103071)","termid":"GO:0103071"}


id: GO:0034746
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC), the small GTPase Cdc42, and CLIP-170; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"APC-IQGAP1-CLIP-170 complex","termid":"GO:0034746"}


id: MONDO:0004753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mechanical strabismus","secondary_identifiers":["icd11.foundation:230827382","DOID:9306","ICD9:378.6","ICD9:378.60","UMLS:C0152223","ICD10CM:H50.6","MEDGEN:101828","SCTID:5371001"],"termid":"MONDO:0004753","xrefs":{"Monarch":{"xref_id":"0004753"}}}


id: PBO:0042308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 2","termid":"PBO:0042308"}


id: PR:Q9UT97
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01621","PANTHER:PTHR11599:SF14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.02c","secondary_identifiers":["UniProtKB:Q9UT97"],"synonyms":[{"name":"Spom972h-PSMA5","type":"exact"}],"termid":"PR:Q9UT97"}


id: PBO:0077556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 263","termid":"PBO:0077556"}


id: MONDO:1011141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in ass.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, ass","secondary_identifiers":["OMIA:001764-9793"],"termid":"MONDO:1011141","xrefs":{"Monarch":{"xref_id":"1011141"}}}


id: MONDO:0003069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of lymphadenitis that is characterized by formation of pus; it is most often caused by staphylococcal or streptococcal bacteria.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"suppurative lymphadenitis","secondary_identifiers":["icd11.foundation:1183198544","NCIT:C27135","UMLS:C0392051","DOID:4639","ICD9:457.8","MEDGEN:140258","SCTID:48573006"],"synonyms":[{"name":"suppurative lymphadenopathy","type":"exact"}],"termid":"MONDO:0003069","xrefs":{"Monarch":{"xref_id":"0003069"}}}


id: MONDO:0016208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solitary rectal ulcer syndrome (SRUS) is a rare rectal disease characterized by rectal bleeding, abdominal pain, passage of mucus, sensation of incomplete evacuation, straining at defecation and rectal prolapsed, secondary to ischemic changes in the rectum.","definition_xrefs":["Orphanet:209964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"solitary rectal ulcer syndrome","secondary_identifiers":["ICD10CM:K62.6","icd11.foundation:1677843970","SCTID:716685003","UMLS:C4274343","GARD:20444","MEDGEN:906337"],"termid":"MONDO:0016208","xrefs":{"Monarch":{"xref_id":"0016208"}}}


id: PR:P78921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit theta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit theta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.05c","secondary_identifiers":["UniProtKB:P78921"],"synonyms":[{"name":"CCT-theta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT8","type":"exact"},{"name":"TCP-1-theta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78921"}


id: PBO:0034377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-innervated_by","termid":"PBO:0034377"}


id: FYPO:0001176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing sucrose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002060","FYPO:0002058","FYPO:0001985","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on sucrose carbon source","synonyms":[{"name":"decreased growth on sucrose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on sucrose carbon source","type":"exact"},{"name":"reduced cell growth on sucrose carbon source","type":"related"},{"name":"slow cell growth on sucrose carbon source","type":"narrow"}],"termid":"FYPO:0001176"}


id: GO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3).","definition_xrefs":["PMID:16648270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"caveola","termid":"GO:0005901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"caveolar macromolecular signaling complex","synonyms":[{"name":"caveolar macromolecular signalling complex","type":"exact"}],"termid":"GO:0002095"}


id: PBO:0005441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRP-like ion channel (predicted)","termid":"PBO:0005441"}


id: MONDO:0033947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary angioedema with normal C1Inh (obsolete MONDO:0033947)","termid":"MONDO:0033947","xrefs":{"Monarch":{"xref_id":"0033947"}}}


id: GO:0102196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cortisol + NADP+ = cortisone + NADPH + H+.","definition_xrefs":["PMID:16216911","RHEA:68616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"11-beta-hydroxysteroid dehydrogenase (NADP+) activity","termid":"GO:0070524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cortisol dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-12085"],"termid":"GO:0102196"}


id: PBO:0038313
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_name","termid":"PBO:0038313"}


id: MONDO:0007108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the anal canal","direct_ancestors":[{"relation_name":"is_a","term_name":"anal canal cancer","termid":"MONDO:0000405"},{"relation_name":"is_a","term_name":"anal carcinoma","termid":"MONDO:0003199"},{"relation_name":"is_a","term_name":"epithelial tumor of anal canal","termid":"MONDO:0018516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal canal carcinoma","secondary_identifiers":["DOID:6126","MESH:C563020","NCIT:C7489","GARD:21772","MEDGEN:107559","OMIM:105580","UMLS:C0563211","Orphanet:424013","SCTID:285310000"],"synonyms":[{"name":"anal canal and perianal gland cancer","type":"exact"},{"name":"anal canal and perianal gland carcinoma","type":"exact"},{"name":"anal canal cancer","type":"broad"},{"name":"anal canal carcinoma","type":"exact"},{"name":"carcinoma of anal canal","type":"exact"},{"name":"carcinoma of the anal canal","type":"exact"},{"name":"cloacogenic carcinoma","type":"related"}],"termid":"MONDO:0007108","xrefs":{"Monarch":{"xref_id":"0007108"}}}


id: GO:0046087
data:
  {"annotated_genes":["SJAG_03771","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69565,69404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside metabolic process","termid":"GO:0046131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"cytidine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"cytidine metabolism","type":"exact"}],"termid":"GO:0046087","terms_by_termid":{"GO:0009972":null}}


id: GO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 3-diphospho-1D-myo-inositol (1,2,4,5,6)pentakisphosphate.","definition_xrefs":["PMID:18981179","MetaCyc:RXN-10971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol hexakisphosphate 3-kinase activity","termid":"GO:0052724"}


id: PBO:0067408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 518, pseudogene","termid":"PBO:0067408"}


id: PBO:0031488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle","termid":"PBO:0031488"}


id: PBO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 33","termid":"PBO:0050331"}


id: FYPO:0002699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002699"}


id: PBO:0073556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 1","termid":"PBO:0073556"}


id: GO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuromedin B receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"neuromedin B receptor binding","synonyms":[{"name":"neuromedin B receptor ligand","type":"narrow"}],"termid":"GO:0031710"}


id: GO:0150110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cholesterol esterification.","definition_xrefs":["PMID:24201375","PMID:21810484","GOC:bc","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cholesterol esterification (obsolete GO:0150110)","termid":"GO:0150110"}


id: PBO:0063710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5","termid":"PBO:0063710"}


id: PBO:0090852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter Tna1","termid":"PBO:0090852"}


id: PBO:0031123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_ammonia_nitrogen_source","termid":"PBO:0031123"}


id: PBO:0067890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 192","termid":"PBO:0067890"}


id: PR:Q9UTA1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- loz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C25B8.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.19c","synonyms":[{"name":"Spom972h-loz1","type":"exact"}],"termid":"PR:Q9UTA1"}


id: PBO:0079588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2D3 antisense RNA 1","termid":"PBO:0079588"}


id: PR:Q10216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YghA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C4H3.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.08","secondary_identifiers":["UniProtKB:Q10216"],"synonyms":[{"name":"Spom972h-yghA","type":"exact"}],"termid":"PR:Q10216"}


id: MONDO:0010043
data:
  {"annotated_genes":["SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84932],"is_not":false,"summary":null,"term":"MONDO:0010043"}]},"cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the BSCL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"},{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"hereditary spastic paraplegia 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4219","Orphanet:100998","UMLS:C2931276","MESH:C536644","MEDGEN:419034","OMIM:270685","DOID:0110770"],"synonyms":[{"name":"BSCL2 hereditary spastic paraplegia","type":"exact"},{"name":"SPG17","type":"exact"},{"name":"Silver spastic paraplegia syndrome","type":"exact"},{"name":"Silver syndrome","type":"exact"},{"name":"autosomal dominant spastic paraplegia 17","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 17","type":"exact"},{"name":"dHMN5B","type":"exact"},{"name":"distal hereditary motor neuropathy type 5B","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in BSCL2","type":"exact"},{"name":"hereditary spastic paraplegia type 17","type":"exact"},{"name":"spastic paraplegia 17","type":"related"},{"name":"spastic paraplegia 17, autosomal dominant","type":"related"},{"name":"spastic paraplegia with amyotrophy of hands and feet","type":"exact"},{"name":"spastic paraplegia-amyotrophy of hands and feet","type":"exact"}],"termid":"MONDO:0010043","terms_by_termid":{"MONDO:0010043":null},"xrefs":{"Monarch":{"xref_id":"0010043"}}}


id: PBO:0078347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 13-1","termid":"PBO:0078347"}


id: PBO:0039497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A20, pseudogene","termid":"PBO:0039497"}


id: GO:0019208
data:
  {"annotated_genes":["SJAG_03793","SJAG_01901","SJAG_00095","SJAG_03353","SJAG_00534","SJAG_01142","SJAG_04968","SJAG_03940","SJAG_00369","SJAG_04638","SJAG_04627","SJAG_04999","SJAG_03272","SJAG_03309","SJAG_00078","SJAG_02380","SJAG_01270","SJAG_04871","SJAG_00526","SJAG_03681","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88475,72644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008597"},{"annotations":[118385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019211"},{"annotations":[114787,78757,92685,74314,97475,72367,76223,117762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[69912,89127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[92739,78062,96092,68225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019888"},{"annotations":[75715,87598,74340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[71413,75411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_01142":null,"SJAG_01270":null,"SJAG_01901":null,"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04627":null,"SJAG_04638":null,"SJAG_04871":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019208","terms_by_termid":{"GO:0004864":null,"GO:0004865":null,"GO:0008160":null,"GO:0008597":null,"GO:0019211":null,"GO:0019888":null,"GO:0072542":null}}


id: PR:Q9USP3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.04","synonyms":[{"name":"Spom972h-ppr6","type":"exact"}],"termid":"PR:Q9USP3"}


id: FYPO:0002181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores and spheroid vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores and spheroid cells (obsolete FYPO:0002181)","synonyms":[{"name":"inviable mixed population including germinated spores and rounded cells","type":"exact"}],"termid":"FYPO:0002181"}


id: GO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-27 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-27 receptor binding","synonyms":[{"name":"IL-27","type":"narrow"},{"name":"interleukin-27 receptor ligand","type":"narrow"}],"termid":"GO:0045523"}


id: PBO:0068844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 82, pseudogene","termid":"PBO:0068844"}


id: PBO:0013120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Dbl5","termid":"PBO:0013120"}


id: GO:0018814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (trans)-phenylacetaldoxime = H2O + phenylacetonitrile.","definition_xrefs":["PMID:25015725","RHEA:20069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylacetaldoxime dehydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0697","MetaCyc:4.99.1.7-RXN","EC:4.8.1.4","KEGG_REACTION:R07638"],"synonyms":[{"name":"(Z)-phenylacetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"PAOx dehydratase activity","type":"related"},{"name":"arylacetaldoxime dehydratase activity","type":"exact"}],"termid":"GO:0018814"}


id: MONDO:0017441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation in which the upper portion of a limb is either shortened or absent.","definition_xrefs":["NCIT:C34928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of upper arm and forearm with hand present","secondary_identifiers":["MEDGEN:539337","Orphanet:294975","SCTID:22841008","UMLS:C0265574","icd11.foundation:1157109358","GARD:12123","ICD10CM:Q71.1"],"synonyms":[{"name":"humero-radio-ulnar intercalary transverse meromelia","type":"exact"},{"name":"phocomelia","type":"exact"}],"termid":"MONDO:0017441","xrefs":{"Monarch":{"xref_id":"0017441"}}}


id: GO:0003045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by detection of forces within the circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by physical factors","synonyms":[{"name":"blood pressure regulation by physical factors","type":"exact"}],"termid":"GO:0003045"}


id: GO:0106040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of GABA-A receptor activity","termid":"GO:0106040"}


id: GO:0051369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The decanoylation of peptidyl-threonine to form peptidyl-O3-decanoyl-L-threonine, typical of the protein ghrelin.","definition_xrefs":["GOC:jsg","RESID:AA0387","PMID:11546772"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine decanoylation (obsolete GO:0051369)","termid":"GO:0051369"}


id: FYPO:0007998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic interphase in which the localization of a protein to interphase microtubule bundles is abnormal.","definition_xrefs":["PMID:15184402","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to interphase microtubule bundle","termid":"FYPO:0007998"}


id: MONDO:1010300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, non-human animal","secondary_identifiers":["OMIA:000755"],"termid":"MONDO:1010300","xrefs":{"Monarch":{"xref_id":"1010300"}}}


id: PBO:0069246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 501, pseudogene","termid":"PBO:0069246"}


id: PBO:0072474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 3","termid":"PBO:0072474"}


id: MONDO:0007532
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Electroencephalographic peculiarity: occipital slow beta waves (obsolete MONDO:0007532)","secondary_identifiers":["OMIM:130400"],"synonyms":[{"name":"Electroencephalographic peculiarity: occipital slow beta waves","type":"exact"}],"termid":"MONDO:0007532","xrefs":{"Monarch":{"xref_id":"0007532"}}}


id: PBO:0017821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain protein Man1, Sad1 interacting factor","termid":"PBO:0017821"}


id: PBO:0059153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 7","termid":"PBO:0059153"}


id: GO:0051494
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id: GO:0006071
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id: CHEBI:15713
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id: MOD:00393
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydroxyl group hydrogen with a methyl group to produce either an ether from an alcohol or an ester from an acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"O-methylated residue","synonyms":[{"name":"OMeRes","type":"exact"}],"termid":"MOD:00393"}


id: GO:0006325
data:
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id: PBO:0028816
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028816"}


id: FYPO:0005520
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nucleosome-dependent ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal nucleosome-dependent ATPase activity","termid":"FYPO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished nucleosome-dependent ATPase activity","synonyms":[{"name":"nucleosome-dependent ATPase activity abolished","type":"exact"}],"termid":"FYPO:0005520"}


id: GO:0032479
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon type I production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of type I interferon production","secondary_identifiers":["Reactome:R-HSA-3134975"],"synonyms":[{"name":"regulation of type I IFN production","type":"exact"}],"termid":"GO:0032479"}


id: PBO:0070694
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 3","termid":"PBO:0070694"}


id: GO:0080093
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of photorespiration. Photorespiration is a light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"photorespiration","termid":"GO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photorespiration","termid":"GO:0080093"}


id: FYPO:0006858
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 37 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K37 methylation","termid":"FYPO:0006855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K37 methylation","synonyms":[{"name":"abolished histone H3 K37 methylation","type":"exact"},{"name":"abolished histone H3K37me","type":"exact"},{"name":"abolished histone lysine H3 K37 methylation","type":"exact"},{"name":"histone H3-K37 methylation abolished","type":"exact"},{"name":"histone H3-K37 methylation absent","type":"exact"}],"termid":"FYPO:0006858"}


id: GO:1990377
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix consisting of a densely packed organomineral assembly in which the mineral phase represents the majority of the material by weight.","definition_xrefs":["PMID:15994301","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organomineral extracellular matrix","termid":"GO:1990377"}


id: GO:0061799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate.","definition_xrefs":["PMID:25896388","GOC:dph","GOC:ik"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclic pyranopterin monophosphate synthase activity","secondary_identifiers":["RHEA:49580","EC:4.6.1.17","MetaCyc:RXN-17809"],"termid":"GO:0061799"}


id: PR:Q10208
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate kinase I that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.10c","secondary_identifiers":["UniProtKB:Q10208"],"synonyms":[{"name":"PK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC4H3.10c","type":"related"},{"name":"Spom972h-pykF","type":"exact"}],"termid":"PR:Q10208"}


id: PBO:0043381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 11","termid":"PBO:0043381"}


id: GO:1901749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene D4.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006790","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"leukotriene D4 catabolic process","synonyms":[{"name":"leukotriene D4 breakdown","type":"exact"},{"name":"leukotriene D4 catabolism","type":"exact"},{"name":"leukotriene D4 degradation","type":"exact"}],"termid":"GO:1901749"}


id: GO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.","definition_xrefs":["EC:1.1.5.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}


id: MONDO:0009456
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reticular dysgenesis","termid":"MONDO:0009973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Immunoerythromyeloid hypoplasia","secondary_identifiers":["OMIM:242880"],"synonyms":[{"name":"Immunoerythromyeloid hypoplasia","type":"exact"}],"termid":"MONDO:0009456","xrefs":{"Monarch":{"xref_id":"0009456"}}}


id: GO:0071517
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in preserving the structure of a stable single-strand DNA lesion that triggers programmed gene conversion at the mating-type locus, thereby restricting mating-type interconversion to one of the two sister chromatids during DNA replication.","definition_xrefs":["PMID:14765111","PMID:18723894","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of imprinting at mating-type locus (obsolete GO:0071517)","synonyms":[{"name":"mating type determination, maintenance of imprinting","type":"exact"}],"termid":"GO:0071517"}


id: GO:0048775
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leucophore differentiation","termid":"GO:0048775"}


id: GO:0140481
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  {"annotated_genes":["SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89022],"is_not":false,"summary":null,"term":"GO:0140481"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + iron-sulfur cluster(in) = ADP + phosphate + iron-sulfur cluster(out).","definition_xrefs":["PMID:31040179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type iron-sulfur cluster transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3.A.1.210.1"],"synonyms":[{"name":"ATPase-coupled Fe-S cluster transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled iron-sulfur cluster transmembrane transporter activity","type":"related"}],"termid":"GO:0140481","terms_by_termid":{"GO:0140481":null}}


id: PBO:0050740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 2","termid":"PBO:0050740"}


id: GO:1900119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of execution phase of apoptosis","termid":"GO:1900117"},{"relation_name":"positively_regulates","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of execution phase of apoptosis","synonyms":[{"name":"activation of execution phase of apoptosis","type":"narrow"},{"name":"up regulation of execution phase of apoptosis","type":"exact"},{"name":"up-regulation of execution phase of apoptosis","type":"exact"},{"name":"upregulation of execution phase of apoptosis","type":"exact"}],"termid":"GO:1900119"}


id: MONDO:0015927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic pneumonia","termid":"MONDO:0005749"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic eosinophilic pneumonia","secondary_identifiers":["Orphanet:182101","MEDGEN:836928","SCTID:708031000","UMLS:C3872845","GARD:20246"],"termid":"MONDO:0015927","xrefs":{"Monarch":{"xref_id":"0015927"}}}


id: PBO:0047186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member B, pseudogene","termid":"PBO:0047186"}


id: MONDO:0001377
data:
  {"annotated_genes":["SJAG_02286","SJAG_02878","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[86207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[86903,86902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous disorder","termid":"MONDO:0004860"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02286":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"vitreous syneresis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:509938","UMLS:C0155366","DOID:11816","SCTID:60189009","ICD9:379.21"],"synonyms":[{"name":"vitreous degeneration","type":"exact"}],"termid":"MONDO:0001377","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0001377"}}}


id: FYPO:0006880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the center (as observed end-on) of the site of cell division is increased.","definition_xrefs":["PMID:30044717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to center of cell division site","synonyms":[{"name":"abnormal protein localization to cell division site, protein concentrated at division site center","type":"exact"},{"name":"increased protein localization at division center","type":"exact"},{"name":"increased protein recruitment to center of cell division site","type":"related"}],"termid":"FYPO:0006880"}


id: GO:0060227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the commitment of a precursor cell to a eye photoreceptor fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway involved in camera-type eye photoreceptor fate commitment","synonyms":[{"name":"Notch signalling pathway involved in camera-type eye photoreceptor fate commitment","type":"exact"}],"termid":"GO:0060227"}


id: MONDO:0006887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the parametrium, the connective tissue of the pelvic floor, extending from the subserous coat of the uterus laterally between the layers of the broad ligament.","definition_xrefs":["MESH:D010249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"serositis","termid":"MONDO:0043786"},{"relation_name":"is_a","term_name":"disorder of uterine broad ligament","termid":"MONDO:0045043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parametritis","secondary_identifiers":["SCTID:280483007","EFO:1001084","UMLS:C0030455","MEDGEN:18295","DOID:1260"],"synonyms":[{"name":"inflammation of parametrium","type":"exact"},{"name":"parametrium inflammation","type":"exact"},{"name":"pelvic cellulitis","type":"exact"}],"termid":"MONDO:0006887","xrefs":{"Monarch":{"xref_id":"0006887"}}}


id: PATO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased life span","synonyms":[{"name":"low life span","type":"exact"}],"termid":"PATO:0001604"}


id: PBO:0075375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 12","termid":"PBO:0075375"}


id: GO:0019528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-arabitol to form xylulose 5-phosphate. D-arabitol is converted into D-xylulose, which is then phosphorylated to form D-xylulose-5-phosphate.","definition_xrefs":["MetaCyc:DARABITOLUTIL-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-arabitol catabolic process","termid":"GO:0051159"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"D-arabitol catabolic process to xylulose 5-phosphate","synonyms":[{"name":"D-arabitol breakdown to xylulose 5-phosphate","type":"exact"},{"name":"D-arabitol degradation","type":"related"},{"name":"D-arabitol degradation to xylulose 5-phosphate","type":"exact"},{"name":"D-arabitol utilization","type":"related"}],"termid":"GO:0019528"}


id: GO:0047479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced glutathione + glutathionylspermidine + ATP = trypanothione + ADP + phosphate.","definition_xrefs":["MetaCyc:6.3.1.9-RXN","EC:6.3.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"trypanothione synthase activity","secondary_identifiers":["RHEA:21532"],"synonyms":[{"name":"TSR synthetase activity","type":"related"},{"name":"glutathionylspermidine:glutathione ligase (ADP-forming)","type":"related"}],"termid":"GO:0047479"}


id: GO:0006056
data:
  {"annotated_genes":["SJAG_01021","SJAG_01264","SJAG_00816","SJAG_04770","SJAG_00598","SJAG_01276","SJAG_04906","SJAG_02519","SJAG_03082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87249,76573,74503,77337,77884,80153,74278,71574,79167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannoprotein metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mannoprotein metabolism","type":"exact"}],"termid":"GO:0006056","terms_by_termid":{"GO:0000032":null}}


id: PBO:0055096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2514","termid":"PBO:0055096"}


id: MONDO:0011893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 5q31.1-q32.","definition_xrefs":["DOID:0110578","PMID:18312703"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant nonsyndromic hearing loss 52 (obsolete MONDO:0011893)","secondary_identifiers":["UMLS:C1843232","MEDGEN:334357","GARD:18119","OMIM:607683","MESH:C564348"],"synonyms":[{"name":"DFNA52","type":"narrow"},{"name":"autosomal dominant deafness 52","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 52","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 52","type":"narrow"},{"name":"deafness, autosomal dominant 42","type":"narrow"},{"name":"deafness, autosomal dominant 52","type":"narrow"}],"termid":"MONDO:0011893","xrefs":{"Monarch":{"xref_id":"0011893"}}}


id: MONDO:1011998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open angle glaucoma, non-human animal","secondary_identifiers":["OMIA:002046"],"termid":"MONDO:1011998","xrefs":{"Monarch":{"xref_id":"1011998"}}}


id: PBO:0057215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378d-2","termid":"PBO:0057215"}


id: PBO:0025511
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 oxidoreductase deficiency","termid":"PBO:0025511"}


id: GO:1990825
data:
  {"annotated_genes":["SJAG_00338"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73529],"is_not":false,"summary":null,"term":"GO:1990825"}]},"cv_name":"molecular_function","definition":"Binding to messenger RNA (mRNA) of a specific nucleotide composition or a specific sequence motif.","definition_xrefs":["PMID:11886857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sequence-specific mRNA binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990825","terms_by_termid":{"GO:1990825":null}}


id: MONDO:0020137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete frontotemporal degeneration with dementia (obsolete MONDO:0020137)","secondary_identifiers":["Orphanet:98535"],"termid":"MONDO:0020137","xrefs":{"Monarch":{"xref_id":"0020137"}}}


id: GO:0004604
data:
  {"annotated_genes":["SJAG_04060"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79700],"is_not":false,"summary":null,"term":"GO:0004604"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 3',5'-diphosphate + H+ + sulfite + thioredoxin disulfide = 3'-phospho-5'-adenylyl sulfate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin; 3'-phosphoadenosine 5'-phosphosulfate is also known as PAPS.","definition_xrefs":["RHEA:11724","EC:1.8.4.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04060":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoadenylyl-sulfate reductase (thioredoxin) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:1.8.4.8-RXN","KEGG_REACTION:R02021"],"synonyms":[{"name":"3'-phosphoadenylylsulfate reductase activity","type":"related"},{"name":"PAPS reductase activity","type":"related"},{"name":"PAPS reductase, thioredoxin-dependent activity","type":"related"},{"name":"PAPS sulfotransferase activity","type":"related"},{"name":"PAdoPS reductase activity","type":"related"},{"name":"adenosine 3',5'-bisphosphate,sulfite:oxidized-thioredoxin oxidoreductase (3'-phosphoadenosine-5'-phosphosulfate-forming)","type":"related"},{"name":"adenosine 3',5'-bisphosphate,sulfite:thioredoxin-disulfide oxidoreductase (3'-phosphoadenosine-5'-phosphosulfate-forming)","type":"related"},{"name":"phosphoadenosine-phosphosulfate reductase activity","type":"related"},{"name":"phosphoadenylyl-sulphate reductase (thioredoxin) activity","type":"exact"},{"name":"thioredoxin:3'-phospho-adenylylsulfate reductase activity","type":"related"},{"name":"thioredoxin:adenosine 3'-phosphate 5'-phosphosulfate reductase activity","type":"related"}],"termid":"GO:0004604","terms_by_termid":{"GO:0004604":null}}


id: PBO:0053554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 561","termid":"PBO:0053554"}


id: PBO:0077936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE pseudogene 2","termid":"PBO:0077936"}


id: MONDO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocardial infarction","termid":"MONDO:0004781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute inferoposterior infarction","secondary_identifiers":["ICD9:410.30","ICD9:410.31","DOID:10648","MEDGEN:573662","ICD9:410.32","SCTID:76593002","UMLS:C0340304"],"synonyms":[{"name":"acute inferoposterior infarction","type":"exact"},{"name":"acute inferoposterior myocardial infarction","type":"exact"},{"name":"acute myocardial infarction of inferoposterior wall","type":"exact"}],"termid":"MONDO:0001088","xrefs":{"Monarch":{"xref_id":"0001088"}}}


id: PBO:0027858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitotic_S_phase_during_cellular_response_to_DNA_damage","termid":"PBO:0027858"}


id: GO:0106276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin IXalpha + NAD+ = biliverdin IXalpha + NADH+ H+.","definition_xrefs":["RHEA:15797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliverdin reductase [NAD(P)+] activity","termid":"GO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"biliberdin reductase (NAD+) activity","termid":"GO:0106276"}


id: PBO:0049034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 21","termid":"PBO:0049034"}


id: GO:0097058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene) and cytokine receptor-like factor 1 (product of the CRLF gene) and is secreted into the extracellular space. The CRLF-CLCF1 complex is a ligand for the ciliary neurotrophic factor (CNTF) receptor complex.","definition_xrefs":["PMID:10966616","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CRLF-CLCF1 complex","synonyms":[{"name":"CLF-CLC complex","type":"narrow"}],"termid":"GO:0097058"}


id: PBO:0071401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 7","termid":"PBO:0071401"}


id: GO:0000820
data:
  {"annotated_genes":["SJAG_03505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000214"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of glutamine family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of glutamine family amino acid metabolism","type":"exact"}],"termid":"GO:0000820","terms_by_termid":{"GO:2000214":null}}


id: PBO:0030586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_isoleucine_level","termid":"PBO:0030586"}


id: MONDO:0020469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"48,XYYY syndrome is a rare Y chromosome number anomaly that affects only males and is characterized by mild-moderate developmental delay (especially speech), normal to mild intellectual disability, large, irregular teeth with poor enamel, tall stature and acne. Radioulnar stenosis and clinodactyly have also been associated. Boys generally present normal genitalia, while hypogonadism and infertility is frequently reported in adult males.","definition_xrefs":["Orphanet:99329"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"tetrasomy","termid":"MONDO:0030502"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"48,XYYY syndrome","secondary_identifiers":["GARD:11985","MEDGEN:1371767","UMLS:C4518082","SCTID:733625003"],"synonyms":[{"name":"48,XYYY","type":"related"}],"termid":"MONDO:0020469","xrefs":{"Monarch":{"xref_id":"0020469"}}}


id: FYPO:0007393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum with both ends at the cell tip(s). The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PMID:32101481","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized, misoriented septum","termid":"FYPO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000138","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"septum mislocalized to cell tip","synonyms":[{"name":"septum mislocalized to cell tip during mitotic cell cycle","type":"related"},{"name":"septum mislocalized to cell tip during vegetative growth","type":"exact"},{"name":"tip septation","type":"exact"}],"termid":"FYPO:0007393"}


id: PBO:0040681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain enriched myelin associated protein 1","termid":"PBO:0040681"}


id: GO:0051396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nerve growth factor receptor activity (obsolete GO:0051396)","synonyms":[{"name":"activation of nerve growth factor receptor activity","type":"narrow"},{"name":"positive regulation of NGF receptor activity","type":"exact"},{"name":"stimulation of nerve growth factor receptor activity","type":"narrow"},{"name":"up regulation of nerve growth factor receptor activity","type":"exact"},{"name":"up-regulation of nerve growth factor receptor activity","type":"exact"},{"name":"upregulation of nerve growth factor receptor activity","type":"exact"}],"termid":"GO:0051396"}


id: SO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The interbase position where something (eg an aberration) occurred.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000408 site (obsolete SO:0000408)","termid":"SO:0000408"}


id: PBO:0088357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase","termid":"PBO:0088357"}


id: PBO:0058275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4652","termid":"PBO:0058275"}


id: MONDO:0008425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Shprintzen-Goldberg omphalocele syndrome is a very rare inherited malformation syndrome characterized by omphalocele, scoliosis, mild dysmorphic features (downslanted palpebral fissures, s-shaped eyelids and thin upper lip), laryngeal and pharyngeal hypoplasia and learning disabilities.","definition_xrefs":["Orphanet:3164"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele syndrome, Shprintzen-Goldberg type","secondary_identifiers":["MESH:C537329","OMIM:182210","SCTID:716230005","UMLS:C1866958","MEDGEN:356653","GARD:9850"],"synonyms":[{"name":"Shprintzen omphalocele syndrome","type":"related"},{"name":"Shprintzen-Goldberg omphalocele syndrome","type":"related"},{"name":"laryngeal and pharyngeal hypoplasia with omphalocele","type":"related"},{"name":"omphalocele with hypoplasia of pharynx and larynx, learning disability, dysmorphic facies, and scoliosis","type":"related"},{"name":"omphalocele, laryngeal and pharyngeal hypoplasia, learning disabilities, dysmorphic facies and spinal anomalies","type":"related"},{"name":"pharynx and larynx hypoplasia with omphalocele","type":"related"}],"termid":"MONDO:0008425","xrefs":{"Monarch":{"xref_id":"0008425"}}}


id: MONDO:0020585
data:
  {"annotated_genes":["SJAG_05283","SJAG_02297","SJAG_04334","SJAG_00605","SJAG_00839","SJAG_04495","SJAG_02009","SJAG_02796","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[85216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[85435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[86823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[85939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86222,86221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[85356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[85548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Any form of anemia that results from the absence of, or the defective action of, any enzyme involved in erythropoiesis.","definition_xrefs":["NCIT:C131630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia due to enzyme disorder","termid":"MONDO:0020584"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia due to erythrocyte enzyme disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1383362","UMLS:C4329304"],"synonyms":[{"name":"anemia due to erythrocyte enzyme disorder","type":"exact"}],"termid":"MONDO:0020585","terms_by_termid":{"MONDO:0009113":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0014221":null},"xrefs":{"Monarch":{"xref_id":"0020585"}}}


id: PBO:0040599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 3","termid":"PBO:0040599"}


id: GO:1900497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of butyryl-CoA catabolic process to butanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"butyryl-CoA catabolic process to butanol","termid":"GO:0044582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0055086","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of butyryl-CoA catabolic process to butanol","synonyms":[{"name":"regulation of butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:1900497"}


id: MOD:00322
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to tele-methyl-L-histidine.","definition_xrefs":["RESID:AA0317","PubMed:6692818","PubMed:8076","PubMed:11474090","PubMed:11875433","PubMed:10601317","PubMed:8645219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated L-histidine","termid":"MOD:00724"},{"relation_name":"is_a","term_name":"monomethylated L-histidine","termid":"MOD:02038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"1'-methyl-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(1-methyl-1H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-methyl-L-histidine","type":"exact"},{"name":"3-methylhistidine","type":"related"},{"name":"4-methyl-histidine","type":"related"},{"name":"MOD_RES Tele-methylhistidine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(epsilon)-methylhistidine","type":"exact"},{"name":"N(tau)-methylhistidine","type":"exact"},{"name":"NteleMeHis","type":"exact"},{"name":"tele-methylated L-histidine","type":"exact"},{"name":"tele-methylhistidine","type":"exact"}],"termid":"MOD:00322"}


id: PBO:0080949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBED3 antisense RNA 1","termid":"PBO:0080949"}


id: PBO:0111862
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein","termid":"PBO:0111862"}


id: PATO:0000535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000535 salt sensitivity value (obsolete PATO:0000535)","termid":"PATO:0000535"}


id: MONDO:0013730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immune system disorder that occurs after allogeneic hematopoietic stem cell transplant and is a reaction of donor immune cells against host tissues. Activated donor T cells damage host epithelial cells after an inflammatory cascade that begins with the preparative regimen.","definition_xrefs":["Orphanet:39812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"disease related to hematopoietic stem cell transplant","termid":"MONDO:0700222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"graft versus host disease","secondary_identifiers":["DOID:0081267","SCTID:234646005","UMLS:C0018133","icd11.foundation:437372167","MedDRA:10018651","GARD:16642","NORD:1203","MESH:D006086","NCIT:C3063","ICD9:279.50","MEDGEN:9082"],"synonyms":[{"name":"GVH","type":"exact"},{"name":"GVHD","type":"exact"},{"name":"GvHD","type":"exact"},{"name":"disease, graft-versus-host","type":"exact"},{"name":"disease, graft-vs-host","type":"exact"},{"name":"disease, homologous wasting","type":"related"},{"name":"disease, runt","type":"related"},{"name":"diseases, graft-versus-host","type":"exact"},{"name":"diseases, graft-vs-host","type":"exact"},{"name":"graft versus host disease","type":"exact"},{"name":"graft vs host disease","type":"exact"},{"name":"graft vs. host disease","type":"exact"},{"name":"graft-VS-host diseases","type":"related"},{"name":"graft-versus-host disease","type":"exact"},{"name":"graft-versus-host disease, resistance to","type":"related"},{"name":"graft-versus-host disease, susceptibility to","type":"related"},{"name":"graft-versus-host diseases","type":"related"},{"name":"graft-versus-host-disease","type":"exact"},{"name":"graft-vs-host disease","type":"exact"},{"name":"homologous wasting disease","type":"related"},{"name":"runt disease","type":"exact"}],"termid":"MONDO:0013730","xrefs":{"Monarch":{"xref_id":"0013730"}}}


id: MONDO:0015119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bronchopulmonary tumor (obsolete MONDO:0015119)","secondary_identifiers":["Orphanet:101945"],"synonyms":[{"name":"rare bronchopulmonary tumor","type":"exact"}],"termid":"MONDO:0015119","xrefs":{"Monarch":{"xref_id":"0015119"}}}


id: PBO:0076911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 alpha","termid":"PBO:0076911"}


id: GO:1903436
data:
  {"annotated_genes":["SJAG_00082","SJAG_01188","SJAG_02838","SJAG_04776","SJAG_03936","SJAG_01114","SJAG_02592","SJAG_03581","SJAG_00845","SJAG_04597","SJAG_00514","SJAG_04468","SJAG_03704","SJAG_03631","SJAG_01787","SJAG_04666","SJAG_03309","SJAG_03048","SJAG_05290","SJAG_03342","SJAG_00256","SJAG_02380","SJAG_01805","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[103485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[102160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[89746,94170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[113166,94340,94171,87280,110320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[103490,110562,90523,119036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[104978,106846,77652,89616,115278,106182,113167,117704,92177,93562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[87281,92178,94174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[118958,93568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[101175,111174,87597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:1903436","terms_by_termid":{"GO:0120306":null,"GO:0140281":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


