# terms

id: PBO:0059720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 28","termid":"PBO:0059720"}


id: GO:0015973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"guanosine pentaphosphate metabolic process","termid":"GO:0015972"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine pentaphosphate biosynthetic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthetic process","type":"exact"},{"name":"guanosine pentaphosphate anabolism","type":"exact"},{"name":"guanosine pentaphosphate biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate formation","type":"exact"},{"name":"guanosine pentaphosphate synthesis","type":"exact"}],"termid":"GO:0015973"}


id: PBO:0052704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 5","termid":"PBO:0052704"}


id: PBO:0087116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome biogenesis factor; nucleolar protein associated with pre-rRNA components of the 90S preribosome, required for cleavage of pre-rRNA at A0, A1 and A2 sites; interacts with RNA helicase Dhr2p and RNA helicase-like protein Utp25p; required for incorporation of Utp25p into preribosomes","termid":"PBO:0087116"}


id: MONDO:0012071
data:
  {"annotated_genes":["SJAG_01957"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85355],"is_not":false,"summary":null,"term":"MONDO:0012071"}]},"cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the AGPAT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"},{"relation_name":"is_a","term_name":"Berardinelli-Seip congenital lipodystrophy","termid":"MONDO:0018883"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:84","DOID:0111135","OMIM:608594","UMLS:C1720862","MEDGEN:318592"],"synonyms":[{"name":"AGPAT2 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"AGPAT2 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"AGPAT2-related Brunzell syndrome","type":"related"},{"name":"BSCL1","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy type 1","type":"related"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 1","type":"exact"},{"name":"Brunzell syndrome AGPAT2-related","type":"exact"},{"name":"Brunzell syndrome, AGPAT2-related","type":"related"},{"name":"CGL1","type":"exact"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in AGPAT2","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in AGPAT2","type":"exact"},{"name":"congenital generalized lipodystrophy type 1","type":"exact"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 1","type":"related"},{"name":"lipodystrophy, congenital generalized, type 1","type":"related"}],"termid":"MONDO:0012071","terms_by_termid":{"MONDO:0012071":null},"xrefs":{"Monarch":{"xref_id":"0012071"}}}


id: GO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the Golgi apparatus, a compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi apparatus part (obsolete GO:0044431)","synonyms":[{"name":"Golgi component","type":"exact"},{"name":"Golgi subcomponent","type":"exact"}],"termid":"GO:0044431"}


id: PR:000044730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"The C-terminal portion of telomere maintenance protein SDE2 (Schizosaccharomyces pombe) that remains following proteolytic cleavage after the second glycine within the GGKGG motif. This portion contains a predicted helical domain.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:28947618"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sde2-C","pombase_gene_id":"SPAC31G5.18c","synonyms":[{"name":"PomBase_original_PRO_term_name: Sde2-C (Schizosaccharomyces pombe)","type":"exact"},{"name":"Sde2-C","type":"exact"},{"name":"Spom-sde2/Sde2-C","type":"exact"}],"termid":"PR:000044730"}


id: PBO:0067187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 248, pseudogene","termid":"PBO:0067187"}


id: GO:0007396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Closure of the dorsal hole. Filopodia extending from each leading edge interdigitate at the dorsal midline and appear to prime the formation of adherens junctions between the two rows of leading edge cells. Newly formed septate junctions are also used to seal the dorsal hole.","definition_xrefs":["GOC:bf","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suture of dorsal opening","termid":"GO:0007396"}


id: GO:0008712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-D-glycero-D-manno-heptose = ADP-L-glycero-D-manno-heptose.","definition_xrefs":["RHEA:17577","EC:5.1.3.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"ADP-glyceromanno-heptose 6-epimerase activity","secondary_identifiers":["KEGG_REACTION:R05176","MetaCyc:5.1.3.20-RXN"],"synonyms":[{"name":"ADP-L-glycero-D-manno-heptose 6-epimerase activity","type":"related"},{"name":"ADPglyceromanno-heptose 6-epimerase activity","type":"related"}],"termid":"GO:0008712"}


id: GO:0045325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-tryptophan, to form peptidyl-L-3-hydroxytryptophan.","definition_xrefs":["RESID:AA0322"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan hydroxylation (obsolete GO:0045325)","termid":"GO:0045325"}


id: MONDO:0009658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme N-acetylglucosamine-6-sulfatase. It is characterized by behavioral changes, sleep disturbances and mental developmental delays.","definition_xrefs":["NCIT:C84900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 3","termid":"MONDO:0018937"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"mucopolysaccharidosis type 3D","secondary_identifiers":["UMLS:C0086650","GARD:7074","SCTID:15892005","icd11.foundation:1780990193","NANDO:2201177","Orphanet:79272","DOID:0111402","MEDGEN:88602","OMIM:252940","NANDO:1200104"],"synonyms":[{"name":"GNS deficiency","type":"exact"},{"name":"MPS 3D","type":"related"},{"name":"MPS III D","type":"exact"},{"name":"MPS IIID","type":"related"},{"name":"MPS3D","type":"exact"},{"name":"MPSIIID","type":"exact"},{"name":"Mucopoly-saccharidosis type 3D","type":"related"},{"name":"N-acetylglucosamine-6-sulfatase deficiency","type":"related"},{"name":"N-acetylglucosamine-6-sulfate sulfatase deficiency","type":"related"},{"name":"Sanfilippo D","type":"exact"},{"name":"Sanfilippo syndrome D","type":"exact"},{"name":"Sanfilippo syndrome type D","type":"exact"},{"name":"glucosamine N-acetyl-6-sulfatase deficiency","type":"exact"},{"name":"mucopolysaccharidosis type 3D","type":"exact"},{"name":"mucopolysaccharidosis type IIID","type":"exact"},{"name":"mucopolysaccharidosis, type 3D","type":"related"},{"name":"mucopolysaccharidosis, type IIID","type":"related"}],"termid":"MONDO:0009658","xrefs":{"Monarch":{"xref_id":"0009658"}}}


id: PBO:0071665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 6","termid":"PBO:0071665"}


id: PBO:0078743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 5","termid":"PBO:0078743"}


id: GO:0120141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of any ecdysone receptor signaling pathway.","definition_xrefs":["PMID:23072462","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"is_a","term_name":"regulation of cellular response to alcohol","termid":"GO:1905957"},{"relation_name":"regulates","term_name":"ecdysone receptor signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ecdysone receptor signaling pathway","synonyms":[{"name":"regulation of ecdysone receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0120141"}


id: PBO:0041009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORCS8 pseudogene 1","termid":"PBO:0041009"}


id: MONDO:0001497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male genital organ vascular disease","secondary_identifiers":["ICD9:608.83","MEDGEN:508280","SCTID:198057005","UMLS:C0042374","DOID:12335"],"synonyms":[{"name":"vascular disorder of male genital organs","type":"exact"}],"termid":"MONDO:0001497","xrefs":{"Monarch":{"xref_id":"0001497"}}}


id: PBO:0080027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 13","termid":"PBO:0080027"}


id: PBO:0055787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loricrin cornified envelope precursor protein","termid":"PBO:0055787"}


id: FYPO:0005605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Ssb1 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Ssb1 foci","type":"related"},{"name":"increased duration of RPA focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad11 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rpa1 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Ssb1 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Ssb1 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005605"}


id: PBO:0043739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 18","termid":"PBO:0043739"}


id: PBO:0072676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotatin","termid":"PBO:0072676"}


id: GO:0086097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating G protein-coupled receptor signaling pathway initiated by angiotensin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating angiotensin-activated signaling pathway","synonyms":[{"name":"Gq-coupled angiotensin receptor signaling pathway","type":"exact"},{"name":"PLC-activating angiotensin receptor signaling pathway","type":"exact"},{"name":"angiotensin-mediated signaling pathway via activation of phospholipase C","type":"exact"},{"name":"phospholipase C-activating angiotensin receptor signaling pathway","type":"exact"},{"name":"phospholipase C-activating angiotensin-mediated signaling pathway","type":"related"}],"termid":"GO:0086097"}


id: PBO:0080262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 25 pseudogene","termid":"PBO:0080262"}


id: GO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response","synonyms":[{"name":"activation of defense response","type":"narrow"},{"name":"stimulation of defense response","type":"narrow"},{"name":"up regulation of defense response","type":"exact"},{"name":"up-regulation of defense response","type":"exact"},{"name":"upregulation of defense response","type":"exact"}],"termid":"GO:0031349"}


id: FYPO:0001114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which the cellular response to M-factor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to pheromone","termid":"FYPO:0001113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to M-factor","termid":"FYPO:0001114"}


id: GO:0099042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The first step in clathrin-dependent endocytosis: invagination of the plasma membrane to form a pit.","definition_xrefs":["PMID:21779028","GOC:dos","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleation of clathrin-coated pit (obsolete GO:0099042)","termid":"GO:0099042"}


id: GO:0036420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of mycolate outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:md"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of cell outer membrane","termid":"GO:0031244"},{"relation_name":"part_of","term_name":"mycolate outer membrane","termid":"GO:0036407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of mycolate outer membrane","synonyms":[{"name":"extrinsic to MOM","type":"exact"},{"name":"extrinsic to mycolate outer membrane","type":"narrow"},{"name":"extrinsic to mycomembrane","type":"exact"}],"termid":"GO:0036420"}


id: GO:0061835
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The surface of a migrating cell that is in contact with the substratum or cell layer.","definition_xrefs":["PMID:11598004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"ventral surface of cell","termid":"GO:0061835"}


id: GO:1900733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of polyketide biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"negatively_regulates","term_name":"polyketide biosynthetic process","termid":"GO:0030639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of polyketide biosynthetic process","synonyms":[{"name":"down regulation of polyketide anabolism","type":"exact"},{"name":"down regulation of polyketide biosynthesis","type":"exact"},{"name":"down regulation of polyketide biosynthetic process","type":"exact"},{"name":"down regulation of polyketide formation","type":"exact"},{"name":"down regulation of polyketide synthesis","type":"exact"},{"name":"down-regulation of polyketide anabolism","type":"exact"},{"name":"down-regulation of polyketide biosynthesis","type":"exact"},{"name":"down-regulation of polyketide biosynthetic process","type":"exact"},{"name":"down-regulation of polyketide formation","type":"exact"},{"name":"down-regulation of polyketide synthesis","type":"exact"},{"name":"downregulation of polyketide anabolism","type":"exact"},{"name":"downregulation of polyketide biosynthesis","type":"exact"},{"name":"downregulation of polyketide biosynthetic process","type":"exact"},{"name":"downregulation of polyketide formation","type":"exact"},{"name":"downregulation of polyketide synthesis","type":"exact"},{"name":"inhibition of polyketide anabolism","type":"exact"},{"name":"inhibition of polyketide biosynthesis","type":"exact"},{"name":"inhibition of polyketide biosynthetic process","type":"narrow"},{"name":"inhibition of polyketide formation","type":"exact"},{"name":"inhibition of polyketide synthesis","type":"exact"},{"name":"negative regulation of polyketide anabolism","type":"exact"},{"name":"negative regulation of polyketide biosynthesis","type":"exact"},{"name":"negative regulation of polyketide formation","type":"exact"},{"name":"negative regulation of polyketide synthesis","type":"exact"}],"termid":"GO:1900733"}


id: PBO:0029481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sterol_ester_level","termid":"PBO:0029481"}


id: PBO:0028021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_physical_quality_phenotype","termid":"PBO:0028021"}


id: PBO:0055840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and immunoglobulin like domains 1","termid":"PBO:0055840"}


id: PBO:0056536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1 pseudogene 1","termid":"PBO:0056536"}


id: PBO:0051706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase F","termid":"PBO:0051706"}


id: PBO:0038360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transports","termid":"PBO:0038360"}


id: GO:0031039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains polyploid copies of a portion of the cell's complete genome. Transcription of genes occurs in macronuclei. Some ciliate species may contain multiple macronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"macronucleus","secondary_identifiers":["Wikipedia:Macronucleus"],"termid":"GO:0031039"}


id: PBO:0041983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 27","termid":"PBO:0041983"}


id: PBO:0057979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3714","termid":"PBO:0057979"}


id: PBO:0086953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of filamentous growth; interacts with FLO11 promoter and regulates FLO11 expression; binds to transcription factors Flo8p and Mss11p; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YDL233W is not an essential gene","termid":"PBO:0086953"}


id: GO:0006873
data:
  {"annotated_genes":["SJAG_02474","SJAG_04096","SJAG_01913","SJAG_04867","SJAG_00668","SJAG_03631","SJAG_01803","SJAG_00923","SJAG_04616","SJAG_04743","SJAG_04955","SJAG_04032","SJAG_04028","SJAG_02457","SJAG_02834","SJAG_01078","SJAG_01694","SJAG_01353","SJAG_04892","SJAG_04675","SJAG_04698","SJAG_01004","SJAG_02716","SJAG_01435","SJAG_02847","SJAG_02735","SJAG_00792","SJAG_04760","SJAG_02578","SJAG_00822","SJAG_01400","SJAG_01007","SJAG_01541","SJAG_03667","SJAG_01990","SJAG_03962","SJAG_01129","SJAG_04258","SJAG_03862","SJAG_00222","SJAG_04031","SJAG_01669","SJAG_00136","SJAG_02019","SJAG_02240","SJAG_04185","SJAG_04677","SJAG_02080","SJAG_04403","SJAG_03528","SJAG_04584","SJAG_03879","SJAG_05294","SJAG_04167","SJAG_01817","SJAG_00301","SJAG_04607","SJAG_02470","SJAG_02023","SJAG_01397","SJAG_02399","SJAG_00532","SJAG_04757","SJAG_03793","SJAG_03850","SJAG_00802","SJAG_02883","SJAG_00328","SJAG_00516","SJAG_03866","SJAG_02532","SJAG_03516","SJAG_00212","SJAG_00916"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93862,93870,103573,77257,100271],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[70306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[72065,73344,70650,113164,78180,79768,73061,71204,108601,73150,99702,74876,118382,79912,69885,97888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[74688,92893,77799,99944,107653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[74689,58798,92062,77800,93816,70818,104046,74007,77741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[74170,69852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[73269,75332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[99703,77858,95196,72021,70223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[75583,114142,74319,76881,99945,103362,104101,103962,72556,73811,78034,94483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[92208,112595,77260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[100297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[72886,71144,70257,77605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[61661,61770,68830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[73701,95413,103698,95593,101426,72338,87783,70527,72689,78250,99802,79854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic ions within a cell. 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id: FYPO:0007702
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is longer than normal, and the mitotic cell cycle is arrested with nuclei at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"inviable elongated cell with mitotic cell cycle arrest in interphase","termid":"FYPO:0001497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"classical cdc phenotype","type":"related"},{"name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"related"},{"name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable elongated cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable elongated vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; elongated cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"}],"termid":"FYPO:0007702","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: FYPO:0009035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of formamide than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to formamide","synonyms":[{"name":"resistance to formamide during mitotic cell cycle","type":"related"},{"name":"resistance to formamide during vegetative growth","type":"exact"},{"name":"resistant to formamide","type":"exact"}],"termid":"FYPO:0009035"}


id: PBO:0062240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BD member 1 pseudogene","termid":"PBO:0062240"}


id: PR:Q9P5N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alr2 gene.","definition_xrefs":["UniProtKB:Q9P5N3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.02","synonyms":[{"name":"Spom972h-alr2","type":"exact"}],"termid":"PR:Q9P5N3"}


id: GO:0019822
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P4 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"P4 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019822"}


id: MONDO:0017570
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"}]},"cv_name":"mondo","definition":"Leukocyte adhesion deficiency (LAD) is a primary immunodeficiency characterized by defects in the leukocyte adhesion process, marked leukocytosis and recurrent infections.","definition_xrefs":["Orphanet:2968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"functional neutrophil defect","termid":"MONDO:0015978"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"leukocyte adhesion deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:124419","NANDO:1200355","NCIT:C27874","NANDO:2200755","SCTID:77358003","GARD:16616","UMLS:C0272187","DOID:6612","icd11.foundation:317341989"],"synonyms":[{"name":"LAD","type":"broad"},{"name":"congenital leukocyte adherence deficiency","type":"exact"}],"termid":"MONDO:0017570","terms_by_termid":{"MONDO:0009953":null},"xrefs":{"Monarch":{"xref_id":"0017570"}}}


id: PBO:0051797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing M","termid":"PBO:0051797"}


id: _global:acts_upstream_of,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_negative_effect","termid":"_global:acts_upstream_of_or_within,_negative_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_negative_effect","secondary_identifiers":["RO:0004035"],"termid":"_global:acts_upstream_of,_negative_effect"}


id: MONDO:0010015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any anterior segment dysgenesis in which the cause of the disease is a mutation in the PXDN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"},{"relation_name":"is_a","term_name":"sclerocornea","termid":"MONDO:0019629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 7","secondary_identifiers":["MEDGEN:462967","Orphanet:289499","UMLS:C3151617","OMIM:269400","GARD:17327","DOID:0080612"],"synonyms":[{"name":"ASGD7","type":"related"},{"name":"CCMCO","type":"exact"},{"name":"COPOA","type":"related"},{"name":"PXDN anterior segment dysgenesis","type":"exact"},{"name":"PXDN-related ocular dysgenesis","type":"exact"},{"name":"anterior segment dysgenesis 7","type":"exact"},{"name":"anterior segment dysgenesis 7, with sclerocornea","type":"exact"},{"name":"anterior segment dysgenesis caused by mutation in PXDN","type":"exact"},{"name":"congenital cataract microcornea with corneal opacity","type":"related"},{"name":"corneal opacification and other ocular anomalies","type":"related"},{"name":"corneal opacification with Other ocular anomalies","type":"related"},{"name":"corneal opacification with other ocular anomalies","type":"related"},{"name":"sclerocornea with Other ocular anomalies","type":"related"},{"name":"sclerocornea with other ocular anomalies","type":"exact"}],"termid":"MONDO:0010015","xrefs":{"Monarch":{"xref_id":"0010015"}}}


id: MONDO:0023575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharophimosis","termid":"MONDO:0001008"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Krauss Herman Holmes syndrome","secondary_identifiers":["UMLS:C2931549","MEDGEN:419832","MESH:C537618"],"synonyms":[{"name":"telecanthus, hypertelorism, strabismus, and pes cavus syndrome","type":"related"}],"termid":"MONDO:0023575","xrefs":{"Monarch":{"xref_id":"0023575"}}}


id: MONDO:0014829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the HELLS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 4","secondary_identifiers":["UMLS:C4310798","MEDGEN:934765","OMIM:616911","DOID:0090011","GARD:16169"],"synonyms":[{"name":"HELLS immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"ICF syndrome 4","type":"exact"},{"name":"ICF4","type":"related"},{"name":"immunodeficiency-centromeric instability-FACIAL anomalies syndrome 4","type":"related"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome 4","type":"exact"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 4","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in HELLS","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 4","type":"exact"}],"termid":"MONDO:0014829","xrefs":{"Monarch":{"xref_id":"0014829"}}}


id: SO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a small nucleolar RNA of the box H/ACA family.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_snoRNA_primary_transcript","synonyms":[{"name":"H ACA box snoRNA primary transcript","type":"exact"}],"termid":"SO:0000596"}


id: PBO:0039696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apurinic/apyrimidinic endodeoxyribonuclease 2","termid":"PBO:0039696"}


id: GO:0102455
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + an anthocyanidin-3-O-beta-D-glucoside = UDP + H+ + an anthocyanidin 3-O-sophoroside.","definition_xrefs":["RHEA:35419","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase activity","secondary_identifiers":["EC:2.4.1.297","MetaCyc:RXN-13965"],"termid":"GO:0102455"}


id: PBO:0011103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet dependent proline dimethyltransferase involved in translation Tae1 (predicted)","termid":"PBO:0011103"}


id: PBO:0077927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 antisense RNA 1","termid":"PBO:0077927"}


id: PBO:0036091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0036091"}


id: MONDO:1040038
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014372"}]},"cv_name":"mondo","definition":"Any retinopathy caused by variants in the TTLL5 gene.","definition_xrefs":["PMID:27162334","PMID:34203883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"TTLL5-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"TTLL5-related retinopathy","type":"exact"}],"termid":"MONDO:1040038","terms_by_termid":{"MONDO:0014372":null},"xrefs":{"Monarch":{"xref_id":"1040038"}}}


id: PBO:0056072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G5C","termid":"PBO:0056072"}


id: PBO:0053558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 566","termid":"PBO:0053558"}


id: GO:0010940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of necrotic cell death. Necrotic cell death is a cell death process that is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["PMID:16507998"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of necrotic cell death (obsolete GO:0010940)","termid":"GO:0010940"}


id: PATO:0001036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001036 relative life span (obsolete PATO:0001036)","termid":"PATO:0001036"}


id: MONDO:0014505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GRIN2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"West syndrome","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 27","secondary_identifiers":["UMLS:C4015316","MEDGEN:863753","OMIM:616139","DOID:0080444","GARD:16063"],"synonyms":[{"name":"DEE27","type":"exact"},{"name":"EIEE27","type":"exact"},{"name":"GRIN2B early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 27","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GRIN2B","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 27","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 27","type":"exact"}],"termid":"MONDO:0014505","xrefs":{"Monarch":{"xref_id":"0014505"}}}


id: GO:0036102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene B4 metabolic process","synonyms":[{"name":"LTB4 metabolism","type":"exact"}],"termid":"GO:0036102"}


id: PBO:0012611
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"No Message in Thiamine","termid":"PBO:0012611"}


id: PBO:0027287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027287"}


id: PBO:0085172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oligopeptide transporter; localized to peroxisomes and affects glutathione redox homeostasis; also localizes to the plasma membrane (PM) and to the late Golgi, and has a role in maintenance of lipid asymmetry between the inner and outer leaflets of the PM; member of the OPT family, with potential orthologs in S. pombe and C. albicans; also plays a role in formation of mature vacuoles and in polarized cell growth","termid":"PBO:0085172"}


id: GO:0033592
data:
  {"annotated_genes":["SJAG_01643"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107111],"is_not":false,"summary":null,"term":"GO:0033592"}]},"cv_name":"molecular_function","definition":"An activity that facilitates the formation of a complementary double-stranded RNA molecule.","definition_xrefs":["GOC:mah","PMID:7543843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded RNA binding","termid":"GO:0003727"},{"relation_name":"is_a","term_name":"annealing activity","termid":"GO:0140666"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01643":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"RNA strand annealing activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033592","terms_by_termid":{"GO:0033592":null}}


id: MOD:01957
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 2-hydroxyproline.","definition_xrefs":["PubMed:23385463","ChEBI:141809","RESID:AA0602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyproline","synonyms":[{"name":"(2R)-2-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2-hydroxyproline","type":"exact"},{"name":"2-oxidanylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES 2-hydroxyproline","type":"exact"},{"name":"alpha-hydroxyproline","type":"exact"}],"termid":"MOD:01957"}


id: GO:0110141
data:
  {"annotated_genes":["SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98009],"is_not":false,"summary":null,"term":"GO:0110141"}]},"cv_name":"biological_process","definition":"The process in which L-glutamate is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:30297026","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transport","termid":"GO:0015813"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-glutamate import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110141","terms_by_termid":{"GO:0110141":null}}


id: PBO:0066552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 16","termid":"PBO:0066552"}


id: MONDO:0001903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"calcific tendinitis","secondary_identifiers":["ICD9:726.11","DOID:14181","ICD10CM:M65.2","icd11.foundation:856383808","MEDGEN:636635","SCTID:95414005","UMLS:C0521515"],"termid":"MONDO:0001903","xrefs":{"Monarch":{"xref_id":"0001903"}}}


id: GO:0032826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell differentiation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"regulates","term_name":"natural killer cell differentiation involved in immune response","termid":"GO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell differentiation involved in immune response","synonyms":[{"name":"regulation of NK cell differentiation during immune response","type":"related"},{"name":"regulation of natural killer cell development involved in immune response","type":"related"},{"name":"regulation of natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0032826"}


id: GO:0031989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a bombesin binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"bombesin receptor signaling pathway","synonyms":[{"name":"bombesin receptor signalling pathway","type":"exact"}],"termid":"GO:0031989"}


id: MONDO:0017997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Telecanthus-hypertelorism-strabismus-pes cavus syndrome is characterized by telecanthus, hypertelorism, strabismus, pes cavus and other variable anomalies. It has been described in a father and his son. The son also had hypospadias, bilateral inguinal hernia, clinodactyly and camptodactyly of the fingers, and radiographic findings including flared metaphyses of the long bones and osteopenia.","definition_xrefs":["Orphanet:3293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telecanthus-hypertelorism-strabismus-pes cavus syndrome","secondary_identifiers":["GARD:18791"],"termid":"MONDO:0017997","xrefs":{"Monarch":{"xref_id":"0017997"}}}


id: MONDO:0100116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral respiratory infection that is caused by the MERS coronavirus (MERS-CoV), which most often manifests with moderate to severe respiratory symptoms, including productive cough and shortness of breath, which can progress to pneumonia and acute respiratory distress syndrome.","definition_xrefs":["NCIT:C128424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"Orthocoronavirinae infectious disease","termid":"MONDO:0020753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Middle East respiratory syndrome","secondary_identifiers":["GARD:22321","UMLS:C3694279","MEDGEN:811327","DOID:0080642","Orphanet:576074","icd11.foundation:1840423014"],"synonyms":[{"name":"MERS","type":"exact"},{"name":"camel flu","type":"exact"}],"termid":"MONDO:0100116","xrefs":{"Monarch":{"xref_id":"0100116"}}}


id: MONDO:0008165
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85397],"is_not":false,"summary":null,"term":"MONDO:0008165"}]},"cv_name":"mondo","definition":"Southeast Asian ovalocytosis (SAO) is a rare hereditary red cell membrane defect characterized by the presence of oval-shaped erythrocytes and with most patients being asymptomatic or occasionally manifesting with mild symptoms such as pallor, jaundice, anemia and gallstones.","definition_xrefs":["Orphanet:98868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary elliptocytosis","termid":"MONDO:0017319"},{"relation_name":"is_a","term_name":"hereditary stomatocytosis","termid":"MONDO:0020102"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"southeast Asian ovalocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16867","ICD9:282.1","SCTID:191169008","UMLS:C1862322","MEDGEN:350649","OMIM:166900","icd11.foundation:835618545"],"synonyms":[{"name":"Melanesian elliptocytosis","type":"exact"},{"name":"Melanesian ovalocytosis","type":"exact"},{"name":"SAO","type":"exact"},{"name":"elliptocytosis 4","type":"related"},{"name":"elliptocytosis, stomatocytic hereditary","type":"related"},{"name":"he, stomatocytic","type":"related"},{"name":"hereditary ovalocytosis","type":"broad"},{"name":"ovalocytosis, Malaysian-Melanesian-Filipino type","type":"related"},{"name":"ovalocytosis, SA type","type":"exact"},{"name":"ovalocytosis, hereditary hemolytic","type":"related"},{"name":"ovalocytosis, southeast Asian","type":"related"},{"name":"sao","type":"exact"},{"name":"stomatocytic elliptocytosis","type":"exact"}],"termid":"MONDO:0008165","terms_by_termid":{"MONDO:0008165":null},"xrefs":{"Monarch":{"xref_id":"0008165"}}}


id: PBO:0071877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 15","termid":"PBO:0071877"}


id: PBO:0089083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein","termid":"PBO:0089083"}


id: PBO:0011518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial trancriptional repressor protein BolA domain (predicted)","termid":"PBO:0011518"}


id: GO:0141176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A small RNA-based gene silencing process in which Piwi-associated RNAs (piRNAs) guide de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32674113","PMID:38359823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation-dependent constitutive heterochromatin formation","termid":"GO:0006346"},{"relation_name":"is_a","term_name":"piRNA-mediated heterochromatin formation","termid":"GO:0140966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"gene silencing by piRNA-directed DNA methylation","termid":"GO:0141176"}


id: GO:0044771
data:
  {"annotated_genes":["SJAG_04280","SJAG_01837","SJAG_04853","SJAG_01082","SJAG_00666","SJAG_01515","SJAG_00145","SJAG_00100","SJAG_03327","SJAG_04287","SJAG_04259","SJAG_02771","SJAG_04126","SJAG_00364","SJAG_04332","SJAG_03854","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114302,106115],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[98477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990946"},{"annotations":[115868,91186,106413],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[75000,116477],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[98478,99924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[102078,99925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[70243,78230],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[98479],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[73246],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[113589],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[94918],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[101124],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[108160],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901993"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell commits to entering the next meiotic cell cycle phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00145":null,"SJAG_00364":null,"SJAG_00666":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03327":null,"SJAG_03854":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell cycle transition","type":"broad"}],"termid":"GO:0044771","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0110031":null,"GO:0110032":null,"GO:1901993":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990946":null,"GO:1990949":null,"GO:1990950":null}}


id: GO:0061437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of vasculature of the renal system over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:11891195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature development","termid":"GO:0061437"}


id: GO:0034368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a protein-lipid complex.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"},{"relation_name":"is_a","term_name":"protein-lipid complex organization","termid":"GO:0071825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-lipid complex remodeling","synonyms":[{"name":"protein-lipid complex remodelling","type":"exact"}],"termid":"GO:0034368"}


id: PBO:0078934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 2-1","termid":"PBO:0078934"}


id: GO:0090127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent of synaptic maturation as a result of the communication from a pre-synaptic cell to a post-synaptic cell across a synapse.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"},{"relation_name":"is_a","term_name":"positive regulation of synapse maturation","termid":"GO:0090129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synapse maturation by synaptic transmission","termid":"GO:0090127"}


id: FYPO:0001118
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04280:allele-3":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-3"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119220,119114,119208],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[119023],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[119177,119176,119229,119180],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"},{"annotations":[119135,119124,119161,119129],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119185,119179,119178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[119184,119183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell morphology (i.e. the size, shape, or structure of the cell) is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative 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morphology","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02013","SJAG_04332","SJAG_00028","SJAG_04280","SJAG_01794","SJAG_04312","SJAG_03453","SJAG_02819","SJAG_04522","SJAG_02592","SJAG_03581","SJAG_03048","SJAG_00514","SJAG_00266"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","ras1delta","gef1delta","sty1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","atf1delta","rga6delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","pka1delta","scd1delta","efc25delta"],"synonyms":[{"name":"abnormal cell morphology during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001118","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0005096
data:
  {"annotated_genes":["SJAG_00991","SJAG_03153","SJAG_02390","SJAG_03021","SJAG_01011","SJAG_00092","SJAG_00551","SJAG_01526","SJAG_04938","SJAG_00467","SJAG_00289","SJAG_03085","SJAG_03748","SJAG_04733","SJAG_04724","SJAG_03268","SJAG_04498","SJAG_04074","SJAG_02765","SJAG_01048","SJAG_02012","SJAG_04013","SJAG_04943","SJAG_04462","SJAG_03338","SJAG_02520","SJAG_04522","SJAG_00028","SJAG_00824","SJAG_02666","SJAG_02231","SJAG_02278","SJAG_04548","SJAG_04776","SJAG_00990","SJAG_04910","SJAG_01184","SJAG_03655","SJAG_02539","SJAG_05346","SJAG_01386","SJAG_04765","SJAG_04080","SJAG_02277","SJAG_01600","SJAG_04400","SJAG_02379","SJAG_00864","SJAG_04391","SJAG_01114"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58532,59884,65139,65231,65599,65826,66163,67514,68146,68831,69614,69710,69745,70009,70212,70451,70642,70807,71234,71301,71526,71908,72353,72469,72825,73187,73299,74613,74716,75275,76486,76531,76787,77163,77223,77396,77924,78024,79019,79347,87285,93085,93093,93731,95631,95862,96323,105089,110755,114806],"is_not":false,"summary":null,"term":"GO:0005096"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00092":null,"SJAG_00289":null,"SJAG_00467":null,"SJAG_00551":null,"SJAG_00824":null,"SJAG_00864":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01011":null,"SJAG_01048":null,"SJAG_01114":null,"SJAG_01184":null,"SJAG_01386":null,"SJAG_01526":null,"SJAG_01600":null,"SJAG_02012":null,"SJAG_02231":null,"SJAG_02277":null,"SJAG_02278":null,"SJAG_02379":null,"SJAG_02390":null,"SJAG_02520":null,"SJAG_02539":null,"SJAG_02666":null,"SJAG_02765":null,"SJAG_03021":null,"SJAG_03085":null,"SJAG_03153":null,"SJAG_03268":null,"SJAG_03338":null,"SJAG_03655":null,"SJAG_03748":null,"SJAG_04013":null,"SJAG_04074":null,"SJAG_04080":null,"SJAG_04391":null,"SJAG_04400":null,"SJAG_04462":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04548":null,"SJAG_04724":null,"SJAG_04733":null,"SJAG_04765":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_04938":null,"SJAG_04943":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"GTPase activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9018806","Reactome:R-HSA-9013111","Reactome:R-HSA-8985594","Reactome:R-HSA-4093339","Reactome:R-HSA-9014434","Reactome:R-HSA-9018745","Reactome:R-HSA-428533","GO:0005099","GO:0017123","Reactome:R-HSA-428522","Reactome:R-HSA-5638007","Reactome:R-HSA-399935","Reactome:R-HSA-9013437","Reactome:R-HSA-9624893","GO:0005101","GO:0005097","GO:0005098","Reactome:R-HSA-9013161","GO:0008060","GO:0030675","Reactome:R-HSA-9013022","Reactome:R-HSA-9014295","Reactome:R-HSA-9013144","Reactome:R-HSA-416559","Reactome:R-HSA-8981637","GO:0005100","Reactome:R-HSA-392513","Reactome:R-HSA-9017488","Reactome:R-HSA-9693282","GO:0046582","Reactome:R-HSA-416546"],"synonyms":[{"name":"ARF GAP activity","type":"narrow"},{"name":"ARF GTPase activator activity","type":"narrow"},{"name":"GAP activity","type":"exact"},{"name":"Rab GAP activity","type":"narrow"},{"name":"Rab GTPase activator activity","type":"narrow"},{"name":"Rac GAP activity","type":"narrow"},{"name":"Rac GTPase activator activity","type":"narrow"},{"name":"Ral GAP activity","type":"narrow"},{"name":"Ral GTPase activator activity","type":"narrow"},{"name":"Ran GAP activity","type":"narrow"},{"name":"Ran GTPase activator activity","type":"narrow"},{"name":"RanGAP","type":"narrow"},{"name":"Rap GAP activity","type":"narrow"},{"name":"Rap GTPase activator activity","type":"narrow"},{"name":"Ras GAP activity","type":"narrow"},{"name":"Ras GTPase activator activity","type":"narrow"},{"name":"Rho GAP activity","type":"narrow"},{"name":"Rho GTPase activator activity","type":"narrow"},{"name":"Sar GAP activity","type":"narrow"},{"name":"Sar GTPase activator activity","type":"narrow"}],"termid":"GO:0005096","terms_by_termid":{"GO:0005096":null}}


id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: MONDO:0001054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pterygium","termid":"MONDO:0005085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"double pterygium","secondary_identifiers":["DOID:10525","UMLS:C0155157","ICD9:372.44","MEDGEN:509817","SCTID:41564009"],"termid":"MONDO:0001054","xrefs":{"Monarch":{"xref_id":"0001054"}}}


id: GO:0071057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to the transmembrane metallopeptidase ADAM15.","definition_xrefs":["PMID:10944520","PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphav-beta3 integrin-ADAM15 complex","synonyms":[{"name":"ITGAV-ITGB3-ADAM15 complex","type":"narrow"}],"termid":"GO:0071057"}


id: GO:0060616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland cord forms by elongation of the mammary bud. The cord is formed once the elongating bud breaks through the mesenchyme and reaches the fat pad.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord formation","synonyms":[{"name":"mammary gland sprout formation","type":"exact"}],"termid":"GO:0060616"}


id: PBO:0003249
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.12","termid":"PBO:0003249"}


id: PATO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture that is uniformly covered in short, oblong, or trench-like depressions.","definition_xrefs":["Book:Book"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scrobiculate","termid":"PATO:0002294"}


id: PR:Q9HGL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4301 gene.","definition_xrefs":["UniProtKB:Q9HGL8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L43-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.04c","synonyms":[{"name":"L37A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl4301","type":"exact"}],"termid":"PR:Q9HGL8"}


id: MONDO:0009949
data:
  {"annotated_genes":["SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85520],"is_not":false,"summary":null,"term":"MONDO:0009949"}]},"cv_name":"mondo","definition":"Pyruvate carboxylase (PC) deficiency is a rare neurometabolic disorder characterized by metabolic acidosis, failure to thrive, developmental delay, and recurrent seizures at an early age in severely affected patients.","definition_xrefs":["Orphanet:3008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"pyruvate carboxylase deficiency disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C85040","DOID:3651","GARD:7512","icd11.foundation:2047948460","SCTID:87694001","MEDGEN:18801","ICD9:277.89","NANDO:2200519","UMLS:C0034341","OMIM:266150","EFO:1001142","MESH:D015324"],"synonyms":[{"name":"Leigh necrotizing encephalopathy due to pyruvate carboxylase deficiency","type":"exact"},{"name":"Leigh syndrome due to PC deficiency","type":"exact"},{"name":"Leigh syndrome due to pyruvate carboxylase deficiency","type":"exact"},{"name":"Pc deficiency","type":"related"},{"name":"ataxia with lactic acidosis 2","type":"related"},{"name":"ataxia with lactic acidosis type 2","type":"exact"},{"name":"ataxia with lactic acidosis type II","type":"exact"},{"name":"deficiency of pyruvic carboxylase","type":"exact"},{"name":"pyruvate carboxylase deficiency","type":"related"},{"name":"pyruvate carboxylase deficiency disease","type":"exact"}],"termid":"MONDO:0009949","terms_by_termid":{"MONDO:0009949":null},"xrefs":{"Monarch":{"xref_id":"0009949"}}}


id: PBO:0056557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 5","termid":"PBO:0056557"}


id: GO:2000786
data:
  {"annotated_genes":["SJAG_05289","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108367,108457],"is_not":false,"summary":null,"term":"GO:2000786"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of autophagic vacuole assembly.","definition_xrefs":["GOC:BHF","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"positive regulation of vacuole organization","termid":"GO:0044090"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of autophagosome assembly","termid":"GO:2000785"},{"relation_name":"positively_regulates","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03851":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of autophagosome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of PAS formation","type":"related"},{"name":"positive regulation of autophagic vacuole assembly","type":"exact"},{"name":"positive regulation of autophagic vacuole formation","type":"related"},{"name":"positive regulation of autophagosome biosynthesis","type":"exact"},{"name":"positive regulation of autophagosome formation","type":"exact"}],"termid":"GO:2000786","terms_by_termid":{"GO:2000786":null}}


id: GO:0097019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of neurotransmitter receptors.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor catabolic process (obsolete GO:0097019)","synonyms":[{"name":"neurotransmitter receptor breakdown","type":"exact"},{"name":"neurotransmitter receptor catabolism","type":"exact"},{"name":"neurotransmitter receptor degradation","type":"exact"}],"termid":"GO:0097019"}


id: GO:0019048
data:
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id: GO:0051654
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id: GO:1904625
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id: PBO:0005342
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id: PBO:0002872
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id: MONDO:0021102
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id: PBO:0064257
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id: GO:0016990
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id: PATO:0000710
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id: GO:0018541
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id: GO:0031363
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id: GO:0016773
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acceptor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-2161193"],"termid":"GO:0016773","terms_by_termid":{"GO:0000155":null,"GO:0000215":null,"GO:0000285":null,"GO:0000823":null,"GO:0000824":null,"GO:0000825":null,"GO:0003872":null,"GO:0003873":null,"GO:0003951":null,"GO:0004001":null,"GO:0004020":null,"GO:0004103":null,"GO:0004140":null,"GO:0004143":null,"GO:0004168":null,"GO:0004305":null,"GO:0004335":null,"GO:0004340":null,"GO:0004371":null,"GO:0004413":null,"GO:0004417":null,"GO:0004430":null,"GO:0004496":null,"GO:0004594":null,"GO:0004672":null,"GO:0004674":null,"GO:0004676":null,"GO:0004683":null,"GO:0004691":null,"GO:0004693":null,"GO:0004694":null,"GO:0004697":null,"GO:0004699":null,"GO:0004707":null,"GO:0004708":null,"GO:0004709":null,"GO:0004711":null,"GO:0004712":null,"GO:0004713":null,"GO:0004740":null,"GO:0004743":null,"GO:0004747":null,"GO:0004765":null,"GO:0004856":null,"GO:0008349":null,"GO:0008353":null,"GO:0008440":null,"GO:0008478":null,"GO:0008531":null,"GO:0008865":null,"GO:0008902":null,"GO:0009927":null,"GO:0016303":null,"GO:0016308":null,"GO:0016773":null,"GO:0017050":null,"GO:0019158":null,"GO:0019912":null,"GO:0035175":null,"GO:0035299":null,"GO:0042736":null,"GO:0043771":null,"GO:0046316":null,"GO:0046404":null,"GO:0047326":null,"GO:0050225":null,"GO:0050262":null,"GO:0050354":null,"GO:0051730":null,"GO:0051731":null,"GO:0051736":null,"GO:0052811":null,"GO:0072354":null,"GO:0072371":null,"GO:0140834":null,"GO:0140836":null,"GO:0140995":null,"GO:0141035":null}}


id: GO:0061475
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  {"annotated_genes":["SJAG_00443"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104461],"is_not":false,"summary":null,"term":"GO:0061475"}]},"cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA in the cytosol, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valyl-tRNA aminoacylation","termid":"GO:0006438"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00443":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"cytosolic valyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061475","terms_by_termid":{"GO:0061475":null}}


id: GO:0000393
data:
  {"annotated_genes":["SJAG_01152","SJAG_01504","SJAG_04497","SJAG_01214","SJAG_02295","SJAG_01200","SJAG_01315","SJAG_00859","SJAG_02455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97792],"is_not":false,"summary":null,"term":"GO:0000393"},{"annotations":[105577,57891,77653],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000349"},{"annotations":[72799,109349,104645,77065],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000350"},{"annotations":[100422],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000388"}]},"cv_name":"biological_process","definition":"Structural rearrangements of the spliceosome complex, containing RNA to be spliced, to generate a catalytic conformation.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00859":null,"SJAG_01152":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_01315":null,"SJAG_01504":null,"SJAG_02295":null,"SJAG_02455":null,"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0065003","GO:0016071","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"spliceosomal conformational changes to generate catalytic conformation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"}],"termid":"GO:0000393","terms_by_termid":{"GO:0000349":null,"GO:0000350":null,"GO:0000388":null,"GO:0000393":null}}


id: PBO:0076011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 2","termid":"PBO:0076011"}


id: GO:0098768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The meiotic cell cycle phase in eukaryotes between meiotic prophase I and meiotic metaphase I. During meiotic prometaphase I, the nuclear envelope breaks down and one kinetochore forms per chromosome. Chromosomes attach to spindle microtubules and begin to move towards the metaphase plate.","definition_xrefs":["PMID:16012859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051327"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051327","GO:0008150"],"is_obsolete":false,"name":"meiotic prometaphase I","termid":"GO:0098768"}


id: GO:0036275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluorouracil stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 5-fluorouracil","synonyms":[{"name":"response to 5-fluoropyrimidine-2,4(1H,3H)-dione","type":"exact"},{"name":"response to fluorouracil","type":"exact"}],"termid":"GO:0036275"}


id: PBO:0028617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2_snRNP_binding","termid":"PBO:0028617"}


id: GO:0072295
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric distal tubule morphogenesis","termid":"GO:0072287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric distal tubule identity","termid":"GO:0072295"}


id: PBO:0056162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 1 like 1","termid":"PBO:0056162"}


id: PBO:0034375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-does_not_overlap_sequence_of","termid":"PBO:0034375"}


id: GO:0036501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric protein complex that contains the co-factors for the ATPase VCP/p97 (Cdc48p in budding yeast). In mammals, this complex consists of UFD1L (UFD1) and NPLOC4 (NPL4). In budding yeast, the complex is a dimer of Ufd1p and Npl4p.","definition_xrefs":["GOC:bf","PMID:10811609","GOC:PARL","PMID:17289586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"UFD1-NPL4 complex","synonyms":[{"name":"Npl4p-Ufd1p complex","type":"exact"},{"name":"UFD1L-NPLOC4 complex","type":"exact"},{"name":"Ufd1-Npl4 binary complex","type":"exact"},{"name":"Ufd1-Npl4 cofactor complex","type":"exact"},{"name":"Ufd1/Npl4 complex","type":"exact"}],"termid":"GO:0036501"}


id: MOD:00501
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of a residue with two iodine atoms.","definition_xrefs":["Unimod:130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated residue","termid":"MOD:00755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diiodinated residue","synonyms":[{"name":"Diiodo","type":"related"},{"name":"I2Res","type":"exact"},{"name":"di-Iodination","type":"related"}],"termid":"MOD:00501"}


id: PBO:0068532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 133, pseudogene","termid":"PBO:0068532"}


id: PBO:0085356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphomevalonate kinase; an essential cytosolic enzyme that acts in the biosynthesis of isoprenoids and sterols, including ergosterol, from mevalonate","termid":"PBO:0085356"}


id: PBO:0059041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 28","termid":"PBO:0059041"}


id: GO:0010140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which adenine, hypoxanthine and their nucleosides from purine nucleotides breakdown are converted back to purine nucleotides. The salvage pathway is important where there is no de-novo purine nucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine, hypoxanthine and their nucleoside salvage (obsolete GO:0010140)","synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010140"}


id: GO:0032441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophorbide a + reduced ferredoxin + 2 O2 = red chlorophyll catabolite + oxidized ferredoxin + H2O.","definition_xrefs":["PMID:14657372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors","termid":"GO:0016730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pheophorbide a oxygenase activity","secondary_identifiers":["EC:1.14.15.17","MetaCyc:RXN-7740","RHEA:48140"],"termid":"GO:0032441"}


id: PBO:0066871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 171","termid":"PBO:0066871"}


id: GO:0062151
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that is capable of catalase activity.","definition_xrefs":["GOC:bhm","PMID:10656833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"catalase complex","termid":"GO:0062151"}


id: PBO:0109840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_allele_systematic_id","termid":"PBO:0109840"}


id: PBO:0060963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFU1 iron-sulfur cluster scaffold","termid":"PBO:0060963"}


id: MONDO:0015732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intermediate anorectal malformation is a rare, genetic, non-syndromic subtype of anorectal malformation, resulting from a developmental defect during embryogenesis, characterized by a wide spectrum of anorectal anomalies lying between the pubococcygeal line and the ischial tuberosity (e.g., rectovestibular and rectovaginal fistulas in the female, rectobulbar fistula in the male, and anal agenesis). Patients may present with failure to pass meconium, failure to thrive, and recurrent urinary tract infections.","definition_xrefs":["Orphanet:171208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate anorectal malformation","secondary_identifiers":["UMLS:C4518340","icd11.foundation:1224425167","MEDGEN:1371993","SCTID:734024009"],"termid":"MONDO:0015732","xrefs":{"Monarch":{"xref_id":"0015732"}}}


id: PBO:0029287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_Mmi1_focus","termid":"PBO:0029287"}


id: GO:1990957
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located at the ciliary transition zone and consists of the NPHP4 and NPHP1 proteins. It acts as an organiser of the transition zone inner structure, specifically the Y-shaped links, in conjunction with the MKS complex. It is involved in ciliary protein trafficking and is required for correct functioning of the WNT and Hippo signaling pathways.","definition_xrefs":["PMID:21498478","PMID:25150219","PMID:21555462","PMID:18337471","PMID:21422230","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NPHP complex","synonyms":[{"name":"NPHP module","type":"exact"}],"termid":"GO:1990957"}


id: PBO:0073764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 3 member 2","termid":"PBO:0073764"}


id: GO:1903865
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of sigma factor antagonist activity.","definition_xrefs":["GOC:TermGenie","PMID:23687042","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sigma factor antagonist complex","termid":"GO:1903865"}


id: MONDO:1011792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute progressive myopathy, non-human animal","secondary_identifiers":["OMIA:000696"],"termid":"MONDO:1011792","xrefs":{"Monarch":{"xref_id":"1011792"}}}


id: PBO:0056951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 17","termid":"PBO:0056951"}


id: MONDO:0030077
data:
  {"annotated_genes":["SJAG_02618"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85273],"is_not":false,"summary":null,"term":"MONDO:0030077"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertebral-cardiac-renal anomalies syndrome","termid":"MONDO:0020831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02618":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005267"],"is_obsolete":false,"name":"vertebral, cardiac, renal, and limb defects syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18510","MEDGEN:1709064","OMIM:618845","UMLS:C5394250"],"synonyms":[{"name":"Congenital Nad Deficiency Disorder 3","type":"exact"},{"name":"VCRL3","type":"exact"},{"name":"VERTEBRAL, CARDIAC, RENAL, AND LIMB DEFECTS SYNDROME 3","type":"exact"},{"name":"vertebral, cardiac, renal, and limb defects syndrome 3","type":"exact"}],"termid":"MONDO:0030077","terms_by_termid":{"MONDO:0030077":null},"xrefs":{"Monarch":{"xref_id":"0030077"}}}


id: FYPO:0003084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished replication fork arrest at mating-type locus","synonyms":[{"name":"abolished replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"replication fork arrest at mating-type locus abolished","type":"exact"},{"name":"replication fork arrest at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003084"}


id: PBO:0052340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 1A","termid":"PBO:0052340"}


id: GO:1901271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipooligosaccharide.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide biosynthetic process","synonyms":[{"name":"lipooligosaccharide anabolism","type":"exact"},{"name":"lipooligosaccharide biosynthesis","type":"exact"},{"name":"lipooligosaccharide formation","type":"exact"},{"name":"lipooligosaccharide synthesis","type":"exact"}],"termid":"GO:1901271"}


id: PBO:0110858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-directed RNA polymerase (RDRC) Rdp1","termid":"PBO:0110858"}


id: PBO:0041799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARD8 antisense RNA 1","termid":"PBO:0041799"}


id: SO:0000570
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal of an immunoglobulin/T-cell receptor gene, including the 3' D-heptamer (SO:0000493), 3' D-spacer, and 3' D-nonamer (SO:0000494) in 3' of the D-region of a D-gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"D_gene_recombination_feature","termid":"SO:0000492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_recombination_signal_sequence","synonyms":[{"name":"3'D-RS","type":"exact"},{"name":"three prime D recombination signal sequence","type":"exact"},{"name":"three_prime_D-recombination_signal_sequence","type":"exact"}],"termid":"SO:0000570"}


id: FYPO:0004193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during S phase of the mitotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during mitotic S phase","synonyms":[{"name":"decreased protein accumulation during mitotic S phase","type":"related"},{"name":"decreased protein level during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced protein level during mitotic S phase","type":"exact"}],"termid":"FYPO:0004193"}


id: PBO:0081967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RANBP2-type containing 1","termid":"PBO:0081967"}


id: GO:0018909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dodecyl sulfate, commonly found as sodium dodecyl sulfate (SDS), a component of a variety of synthetic surfactants.","definition_xrefs":["UM-BBD_pathwayID:dds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dodecyl sulfate metabolic process","synonyms":[{"name":"dodecyl sulfate metabolism","type":"exact"},{"name":"dodecyl sulphate metabolic process","type":"exact"},{"name":"dodecyl sulphate metabolism","type":"exact"}],"termid":"GO:0018909"}


id: GO:0018366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a mixture of the two possible enantiomers from the D- or L-enantiomer of a chiral amino acid.","definition_xrefs":["ISBN:0198506732","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"chiral amino acid racemization","termid":"GO:0018366"}


id: PBO:0044551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein kinase 2","termid":"PBO:0044551"}


id: PBO:0113003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease involved in regulation of pseudohyphal growth; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes human Rh factors; expression is under nitrogen catabolite repression regulation; activity is controlled by phospho-silencing; phosphorylation of Mep2 mediated by Npr1; dephosphorylation involves Psr1p and Psr2p; Twin-His motif ensures transport specificity","termid":"PBO:0113003"}


id: PBO:0072930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 10","termid":"PBO:0072930"}


id: GO:0100028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates conjugation with cellular fusion.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of conjugation with cellular fusion by transcription from RNA polymerase II promoter (obsolete GO:0100028)","termid":"GO:0100028"}


id: PBO:0013013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu23","termid":"PBO:0013013"}


id: MONDO:0004430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the penis and is characterized by a mixture of morphologic patterns (e.g., high grade squamous cell carcinoma and verrucous carcinoma or warty-basaloid carcinoma).","definition_xrefs":["NCIT:C39959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"penis mixed squamous cell carcinoma","secondary_identifiers":["DOID:8009","MEDGEN:268711","UMLS:C1513369"],"synonyms":[{"name":"mixed squamous cell carcinoma of the penis","type":"exact"}],"termid":"MONDO:0004430","xrefs":{"Monarch":{"xref_id":"0004430"}}}


id: GO:1990577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a methyl group from the C-terminal amino acid of a protein.","definition_xrefs":["PMID:11060018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demethylation","termid":"GO:0006482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein demethylation","termid":"GO:1990577"}


id: PBO:0076168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 4","termid":"PBO:0076168"}


id: GO:0080163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein serine/threonine phosphatase activity: catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate.","definition_xrefs":["PMID:19407142"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein serine/threonine phosphatase activity (obsolete GO:0080163)","synonyms":[{"name":"regulation of protein phosphatase type 2c activity","type":"narrow"}],"termid":"GO:0080163"}


id: PBO:0071453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 59","termid":"PBO:0071453"}


id: PBO:0057601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 938","termid":"PBO:0057601"}


id: PBO:0027031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_envelope","termid":"PBO:0027031"}


id: GO:0033076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["GOC:mah","PMID:26503307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isoquinoline alkaloid metabolic process","synonyms":[{"name":"ipecac alkaloid metabolism","type":"related"},{"name":"isoquinoline alkaloid metabolism","type":"exact"}],"termid":"GO:0033076"}


id: MONDO:0850110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"melanoma in congenital melanocytic nevus","secondary_identifiers":["UMLS:C1711221","DOID:0070327","MEDGEN:313976"],"termid":"MONDO:0850110","xrefs":{"Monarch":{"xref_id":"0850110"}}}


id: PBO:0058352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4725","termid":"PBO:0058352"}


id: MONDO:0600003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemorrhagic fever caused by bacteria. Bacterial hemorrhagic disease is rare. One example of a bacterial hemorrhagic disease is scrub typhus.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"hemorrhagic fever","termid":"MONDO:0600002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial hemorrhagic fever","synonyms":[{"name":"bacterial haemorrhagic fever","type":"exact"},{"name":"haemorrhagic fever, bacterial","type":"exact"}],"termid":"MONDO:0600003","xrefs":{"Monarch":{"xref_id":"0600003"}}}


id: GO:0047052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-cheilanthifoline + [reduced NADPH--hemoprotein reductase] + O2 -> (S)-stylopine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:13773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(S)-stylopine synthase activity","secondary_identifiers":["KEGG_REACTION:R04690","EC:1.14.19.64","MetaCyc:1.1.3.32-RXN"],"synonyms":[{"name":"(S)-cheilanthifoline oxidase (methylenedioxy-bridge-forming) activity","type":"related"},{"name":"(S)-cheilanthifoline,NADPH:oxygen oxidoreductase (methylenedioxy-bridge-forming)","type":"related"}],"termid":"GO:0047052"}


id: GO:0140515
data:
  {"annotated_genes":["SJAG_03073","SJAG_00680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93595,101224],"is_not":false,"summary":null,"term":"GO:0140515"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the mitotic nuclear bridge during closed mitosis.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic nuclear membrane organization","termid":"GO:0101024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear bridge organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140515","terms_by_termid":{"GO:0140515":null}}


id: MONDO:0851100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant cranial nerve neoplasm","termid":"MONDO:0002433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant olfactory nerve neoplasm","secondary_identifiers":["DOID:370","UMLS:C0496838","MEDGEN:105419"],"termid":"MONDO:0851100","xrefs":{"Monarch":{"xref_id":"0851100"}}}


id: GO:0046053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dAMP, deoxyadenosine monophosphate (2'-deoxyadenosine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dAMP metabolic process","synonyms":[{"name":"dAMP metabolism","type":"exact"}],"termid":"GO:0046053"}


id: GO:0036511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the first alpha-1,2-linked mannose from the A-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:bf","PMID:12829701","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete trimming of first mannose on A branch (obsolete GO:0036511)","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8A(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8A","type":"related"},{"name":"glycoprotein mannose trimming on A branch","type":"broad"}],"termid":"GO:0036511"}


id: GO:0140889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of nucleosomes during DNA replication to allow the replication machinery to access the DNA.","definition_xrefs":["PMID:34471130","PMID:35308047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"DNA replication-dependent chromatin disassembly","termid":"GO:0140889"}


id: GO:0035330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hippo signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"hippo signaling","termid":"GO:0035329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of hippo signaling","synonyms":[{"name":"regulation of hippo signaling cascade","type":"related"},{"name":"regulation of hippo signaling pathway","type":"exact"},{"name":"regulation of hippo signalling cascade","type":"related"}],"termid":"GO:0035330"}


id: FYPO:0000467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased invasive growth (obsolete FYPO:0000467)","synonyms":[{"name":"invasive growth: increased","type":"related"}],"termid":"FYPO:0000467"}


id: PBO:0051125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-3 (pseudogene)","termid":"PBO:0051125"}


id: GO:0102410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin 4'-O-glucoside + UDP-alpha-D-glucose(2-) = quercetin 3,4'-O-diglucoside + UDP(3-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin-4',3-O-glucosyltransferase activity (obsolete GO:0102410)","termid":"GO:0102410"}


id: GO:0016078
data:
  {"annotated_genes":["SJAG_04006","SJAG_04818","SJAG_01191","SJAG_04824","SJAG_03276","SJAG_00854","SJAG_03179","SJAG_01818","SJAG_04321","SJAG_03984","SJAG_04153","SJAG_03745","SJAG_02275","SJAG_01702","SJAG_04084","SJAG_16455","SJAG_01521","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115348,90063,94721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180037"},{"annotations":[106269,70908,99404,70351,74800,115698,71275,72085,107264,77272,88124,115256,69893,97026,101877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA metabolic process","termid":"GO:0006399"},{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01702":null,"SJAG_01818":null,"SJAG_02275":null,"SJAG_03179":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9708296"],"synonyms":[{"name":"tRNA breakdown","type":"exact"},{"name":"tRNA catabolic process","type":"exact"},{"name":"tRNA catabolism","type":"exact"},{"name":"tRNA degradation","type":"exact"}],"termid":"GO:0016078","terms_by_termid":{"GO:0071038":null,"GO:0180037":null}}


id: PATO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluid flow that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fluid flow rate","termid":"PATO:0002243"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fluid flow","synonyms":[{"name":"high flow","type":"exact"}],"termid":"PATO:0001839"}


id: GO:0006188
data:
  {"annotated_genes":["SJAG_03355","SJAG_01661","SJAG_02850","SJAG_01081","SJAG_04681","SJAG_01814","SJAG_06634","SJAG_02364","SJAG_04123","SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65029,71166,69446,76514,56912,57781,59768,64065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[75169,64394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"IMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"IMP anabolism","type":"exact"},{"name":"IMP biosynthesis","type":"exact"},{"name":"IMP formation","type":"exact"},{"name":"IMP synthesis","type":"exact"}],"termid":"GO:0006188","terms_by_termid":{"GO:0006189":null,"GO:0032264":null}}


id: PBO:0038522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 1","termid":"PBO:0038522"}


id: GO:0019554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including oxaloacetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate metabolic process","termid":"GO:0006107"},{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"glutamate catabolic process to oxaloacetate","synonyms":[{"name":"glutamate breakdown to oxaloacetate","type":"exact"},{"name":"glutamate degradation to oxaloacetate","type":"exact"}],"termid":"GO:0019554"}


id: GO:0007345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of an embryo and its organized structures.","definition_xrefs":["ISBN:0070524300","ISBN:0140512888","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete embryogenesis and morphogenesis (obsolete GO:0007345)","synonyms":[{"name":"embryogenesis and morphogenesis","type":"exact"}],"termid":"GO:0007345"}


id: PBO:0029871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_methylation","termid":"PBO:0029871"}


id: GO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of tyramine to form octopamine.","definition_xrefs":["PMID:10745161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tyramine-beta hydroxylase activity","termid":"GO:0004836"}


id: MONDO:0013834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any UV-sensitive syndrome in which the cause of the disease is a mutation in the UVSSA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UV-sensitive syndrome","termid":"MONDO:0015797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"UV-sensitive syndrome 3","secondary_identifiers":["OMIM:614640","UMLS:C3553328","GARD:15828","NCIT:C173107","MEDGEN:766242"],"synonyms":[{"name":"UV-sensitive syndrome 3","type":"exact"},{"name":"UV-sensitive syndrome caused by mutation in UVSSA","type":"exact"},{"name":"UV-sensitive syndrome type 3","type":"exact"},{"name":"UVSS3","type":"related"},{"name":"UVSSA UV-sensitive syndrome","type":"exact"}],"termid":"MONDO:0013834","xrefs":{"Monarch":{"xref_id":"0013834"}}}


id: PBO:0084901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial tRNA:pseudouridine synthase; acts at positions 27 and 28, but not at position 72; efficiently and rapidly targeted to mitochondria, specifically dedicated to mitochondrial tRNA modification; mutation also affects pseudouridylation of some nuclear-encoded mRNAs; PUS2 has a paralog, PUS1, that arose from the whole genome duplication","termid":"PBO:0084901"}


id: PBO:0065465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 7 pseudogene 1","termid":"PBO:0065465"}


id: MONDO:0011843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TCAP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of telethonin","termid":"MONDO:0016192"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 25","secondary_identifiers":["DOID:0110328","MESH:C564388","MEDGEN:895360","UMLS:C4225408","OMIM:607487"],"synonyms":[{"name":"CMH25","type":"exact"},{"name":"TCAP hypertrophic cardiomyopathy","type":"exact"},{"name":"Tcap hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 25","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 25","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 25","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 25","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TCAP","type":"exact"},{"name":"hypertrophic cardiomyopathy type 25","type":"exact"}],"termid":"MONDO:0011843","xrefs":{"Monarch":{"xref_id":"0011843"}}}


id: PBO:0075944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG2 antisense RNA 1","termid":"PBO:0075944"}


id: MONDO:1010677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtia, non-human animal","termid":"MONDO:1010091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia, sheep","secondary_identifiers":["OMIA:001952-9940"],"termid":"MONDO:1010677","xrefs":{"Monarch":{"xref_id":"1010677"}}}


id: PBO:0068951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 195, pseudogene","termid":"PBO:0068951"}


id: PBO:0052747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 39","termid":"PBO:0052747"}


id: PBO:0038439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase pseudogene 1","termid":"PBO:0038439"}


id: PBO:0005716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase Fmn1","termid":"PBO:0005716"}


id: GO:0031511
data:
  {"annotated_genes":["SJAG_03619","SJAG_04581","SJAG_04696","SJAG_04040","SJAG_00350","SJAG_00684","SJAG_01928","SJAG_04255","SJAG_01278","SJAG_04177","SJAG_02664"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61517,89433,89786,94059,94454,97679,105344,106159,112916,113353,113937],"is_not":false,"summary":null,"term":"GO:0031511"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of the inner kinetochore, which is involved in the loading of the centromeric histone h3 variant CENP-A onto centromeres and in centromere specific heterochromatin formation. The complex contains about 12 proteins, of which two are known as Mis6 and Sim4 in S. pombe and CENP-I and CENP-H in human.","definition_xrefs":["PMID:12719471","GOC:vw","PMID:15897182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"inner kinetochore","termid":"GO:0000939"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00350":null,"SJAG_00684":null,"SJAG_01278":null,"SJAG_01928":null,"SJAG_02664":null,"SJAG_03619":null,"SJAG_04040":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04581":null,"SJAG_04696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0000776","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Mis6-Sim4 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"Mcm21","type":"related"},{"name":"Mis6 centromere subcomplex","type":"narrow"},{"name":"Mis6-Mal2-Sim4 centromere complex","type":"exact"},{"name":"Sim4 complex","type":"exact"}],"termid":"GO:0031511","terms_by_termid":{"GO:0031511":null}}


id: MONDO:0018969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniorachischisis is the most severe form of neural tube defect in which both the brain and spinal cord remain open to varying degrees. It is a very rare congenital malformation of the central nervous system.","definition_xrefs":["Orphanet:63260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"craniorachischisis","secondary_identifiers":["NCIT:C98907","GARD:10504","MedDRA:10011321","UMLS:C0152426","HP:0030770","ICD9:740.1","MEDGEN:56290","SCTID:32219008","icd11.foundation:675690362"],"synonyms":[{"name":"cranial rachischisis","type":"exact"},{"name":"craniorachischisis","type":"exact"},{"name":"craniorachischisis (disease)","type":"exact"}],"termid":"MONDO:0018969","xrefs":{"Monarch":{"xref_id":"0018969"}}}


id: GO:0006279
data:
  {"annotated_genes":["SJAG_01762","SJAG_00857","SJAG_01354","SJAG_00884","SJAG_04210","SJAG_02348"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[56974,58109,60783,61022,62394,65735],"is_not":false,"summary":null,"term":"GO:0006279"}]},"cv_name":"biological_process","definition":"The replication of DNA that precedes meiotic cell division.","definition_xrefs":["GO_REF:0000060","GOC:ai","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication","termid":"GO:0033260"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"premeiotic DNA replication","references_by_uniquename":{"GO_REF:0000117":null},"secondary_identifiers":["GO:1902968"],"synonyms":[{"name":"DNA replication during S phase involved in meiotic cell cycle","type":"related"},{"name":"DNA replication involved in S phase involved in meiotic cell cycle","type":"exact"},{"name":"DNA replication involved in S-phase involved in meiotic cell cycle","type":"exact"},{"name":"meiotic DNA replication","type":"related"},{"name":"meiotic DNA synthesis","type":"related"},{"name":"meiotic cell cycle DNA replication","type":"exact"},{"name":"meiotic nuclear cell cycle DNA replication","type":"exact"},{"name":"nuclear cell cycle DNA replication involved in meiotic cell cycle","type":"exact"},{"name":"premeiotic DNA synthesis","type":"related"}],"termid":"GO:0006279","terms_by_termid":{"GO:0006279":null}}


id: PR:P36589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.07","synonyms":[{"name":"Spom972h-cdc14","type":"exact"}],"termid":"PR:P36589"}


id: FYPO:0003525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the addition of actin monomers to a filament occurs to a greater extent than normal at one or both cell tips.","definition_xrefs":["PMID:24954052","GO:0030041","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization at cell tip","termid":"FYPO:0003524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"increased actin filament polymerization at cell tip","synonyms":[{"name":"increased actin filament polymerisation at cell tip","type":"exact"},{"name":"increased actin filament polymerization at cell end","type":"exact"},{"name":"increased actin filament polymerization at cell tip during mitotic cell cycle","type":"related"},{"name":"increased actin filament polymerization at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003525"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lecithin:11-cis retinol acyltransferase activity (obsolete GO:0102279)","termid":"GO:0102279"}


id: PBO:0113053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Compartment-specific sequestrase chaperone; small hsp that sequesters proteins at intranuclear quality control sites (INQs); sumoylated form promotes protein clearance from INQs during recovery from genotoxic stress; v-SNARE binding protein that mediates late endosome-Golgi protein sorting; modulates arginine uptake and pH homeostasis between the vacuole and plasma membrane H(+)-ATPase; role in prion curing; expression after severe ethanol stress is involved in clearance of denatured proteins","termid":"PBO:0113053"}


id: FYECO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiolutin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiolutin","termid":"FYECO:0000373"}


id: GO:0072133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric mesenchymal tissue are generated and organized. Metanephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"metanephric mesenchyme development","termid":"GO:0072075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesenchyme morphogenesis","termid":"GO:0072133"}


id: GO:0061296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesonephros development","termid":"GO:0061218"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:0061295"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072040"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"negative regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"negative regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061296"}


id: MONDO:0006003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the body of uterus.","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus cancer","secondary_identifiers":["MEDGEN:364875","SCTID:371972005","DOID:9460","EFO:0007532","ICD9:182","NCIT:C61574","UMLS:C1883486"],"synonyms":[{"name":"body of uterus cancer","type":"exact"},{"name":"cancer of body of uterus","type":"exact"},{"name":"cancer of the corpus uteri","type":"exact"},{"name":"corpus uteri cancer","type":"exact"},{"name":"endometrial cancer","type":"related"},{"name":"malignant body of uterus neoplasm","type":"exact"},{"name":"malignant neoplasm of body of uterus","type":"exact"},{"name":"uterine (including endometrial) cancer","type":"exact"},{"name":"uterine corpus cancer","type":"exact"}],"termid":"MONDO:0006003","xrefs":{"Monarch":{"xref_id":"0006003"}}}


id: MONDO:0006294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the pleura. A representative example of primary malignant pleural neoplasm is the malignant pleural mesothelioma. A representative example of metastatic malignant neoplasm to the pleura is metastatic carcinoma that has spread to the pleura from another anatomic site.","definition_xrefs":["NCIT:C3547"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","termid":"MONDO:0002176"},{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"pleural neoplasm","termid":"MONDO:0021065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleural cancer","secondary_identifiers":["UMLS:C0153494","DOID:5158","ICD9:163","EFO:1000362","ICD9:163.9","MEDGEN:56307","SCTID:363433009","ICD9:163.8","ICD10CM:C38.4"],"synonyms":[{"name":"cancer of pleura","type":"exact"},{"name":"cancer of the pleura","type":"exact"},{"name":"malignant neoplasm of pleura","type":"exact"},{"name":"malignant neoplasm of the pleura","type":"exact"},{"name":"malignant pleura neoplasm","type":"exact"},{"name":"malignant pleural neoplasm","type":"exact"},{"name":"malignant pleural tumor","type":"exact"},{"name":"malignant pleural tumour","type":"exact"},{"name":"malignant tumor of pleura","type":"exact"},{"name":"malignant tumor of the pleura","type":"exact"},{"name":"malignant tumour of pleura","type":"exact"},{"name":"malignant tumour of the pleura","type":"exact"},{"name":"neoplasm of pleura","type":"broad"},{"name":"pleura cancer","type":"exact"},{"name":"pleural cancer","type":"exact"},{"name":"pleural tumor","type":"broad"},{"name":"pleural tumour","type":"broad"}],"termid":"MONDO:0006294","xrefs":{"Monarch":{"xref_id":"0006294"}}}


id: GO:0044172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex system of membrane-bounded compartments located between host cell endoplasmic reticulum (ER) and the host Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum-Golgi intermediate compartment","synonyms":[{"name":"host ER-Golgi intermediate compartment","type":"exact"},{"name":"host cell ER-Golgi intermediate compartment","type":"exact"}],"termid":"GO:0044172"}


id: GO:0004815
data:
  {"annotated_genes":["SJAG_01197","SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76351,76474],"is_not":false,"summary":null,"term":"GO:0004815"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp).","definition_xrefs":["EC:6.1.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01197":null,"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"aspartate-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ASPARTATE--TRNA-LIGASE-RXN","Reactome:R-HSA-379867","RHEA:19649","Reactome:R-HSA-380229"],"synonyms":[{"name":"L-aspartate:tRNAAsp ligase (AMP-forming)","type":"related"},{"name":"aspartic acid translase activity","type":"related"},{"name":"aspartyl ribonucleate synthetase activity","type":"related"},{"name":"aspartyl ribonucleic synthetase activity","type":"related"},{"name":"aspartyl-tRNA synthetase activity","type":"exact"},{"name":"aspartyl-transfer RNA synthetase activity","type":"related"},{"name":"aspartyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004815","terms_by_termid":{"GO:0004815":null}}


id: FYPO:0002890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the horsetail nucleus is abnormal. The horsetail nucleus forms during the rapid oscillatory movement at meiotic prophase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during meiosis I","termid":"FYPO:0005651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"abnormal horsetail nucleus morphology","synonyms":[{"name":"abnormal horsetail nuclear morphology","type":"exact"}],"termid":"FYPO:0002890"}


id: PBO:0003422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit Cut3","termid":"PBO:0003422"}


id: PBO:0050156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 12","termid":"PBO:0050156"}


id: GO:0033799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + myricetin = S-adenosyl-L-homocysteine + laricitrin.","definition_xrefs":["RHEA:25629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"myricetin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8451","GO:0102437","KEGG_REACTION:R06815"],"synonyms":[{"name":"CrCOMT2","type":"related"},{"name":"S-adenosyl-L-methionine:myricetin O-methyltransferase activity","type":"related"},{"name":"flavonoid 3',5'-O-dimethyltransferase activity","type":"related"},{"name":"myricetin 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0033799"}


id: GO:1901679
data:
  {"annotated_genes":["SJAG_03503","SJAG_00154","SJAG_00760","SJAG_03334","SJAG_04328","SJAG_02050","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[101144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[101145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[58733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[102643,58732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[107362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[92661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[78974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of nucleotide across a membrane.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03503":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"nucleotide transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide membrane transport","type":"exact"}],"termid":"GO:1901679","terms_by_termid":{"GO:0140021":null,"GO:1903790":null,"GO:1990519":null,"GO:1990544":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null}}


id: FYPO:0002930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal poly(A) tail length","termid":"FYPO:0002929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002929"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002929"],"is_obsolete":false,"name":"decreased poly(A) tail length","synonyms":[{"name":"decreased polyA sequence length","type":"exact"},{"name":"decreased polyA tail length","type":"exact"},{"name":"reduced poly(A) tail length","type":"exact"},{"name":"short poly(a) tails","type":"exact"}],"termid":"FYPO:0002930"}


id: FYPO:0000898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fusion, the merging of two or more separate mitochondria into a single compartment, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0008053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial fusion","synonyms":[{"name":"normal mitochondrial fusion during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial fusion during vegetative growth","type":"exact"}],"termid":"FYPO:0000898"}


id: GO:0006982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid hydroperoxide stimulus. Lipid hydroperoxide is the highly reactive primary oxygenated products of polyunsaturated fatty acids.","definition_xrefs":["GOC:jl","PMID:10944149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hydroperoxide","termid":"GO:0033194"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipid hydroperoxide","synonyms":[{"name":"response to LHPO","type":"exact"}],"termid":"GO:0006982"}


id: GO:0071142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a single type of SMAD family proteins. In the absence of Smad4, phosphorylation of R-SMADs results in their homotrimerization. However, these complexes do not appear to import into the nucleus and are assumed to be transcriptionally inactive.","definition_xrefs":["PMID:11779505","PMID:16322555","PMID:9670020","GOC:mah","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD protein complex","termid":"GO:0071141"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"homomeric SMAD protein complex","secondary_identifiers":["GO:0071143"],"synonyms":[{"name":"SMAD1 homotrimer complex","type":"narrow"},{"name":"SMAD1 protein complex","type":"narrow"},{"name":"SMAD2 homotrimer complex","type":"narrow"},{"name":"SMAD2 protein complex","type":"narrow"},{"name":"SMAD3 homotrimer complex","type":"narrow"},{"name":"SMAD3 protein complex","type":"narrow"}],"termid":"GO:0071142"}


id: PBO:0047520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZ family zinc finger 2","termid":"PBO:0047520"}


id: MONDO:1010535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megacolon that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megacolon, non-human animal","termid":"MONDO:1010039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megacolon, domestic cat","secondary_identifiers":["OMIA:000629-9685"],"termid":"MONDO:1010535","xrefs":{"Monarch":{"xref_id":"1010535"}}}


id: GO:1904307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desipramine stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:20549303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to desipramine","termid":"GO:1904307"}


id: MONDO:0008347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Idiopathic and/or familial pulmonary arterial hypertension (IFPAH) is a form or pulmonary arterial hypertension (PAH, see his term) characterized by elevated pulmonary arterial resistance leading to right heart failure; it is progressive and potentially fatal. About 75% of heritable pulmonary arterial hypertension (HPAH) have an identified mutation. HPAH has been linked to mutations in BMPR2 in 75% of cases; other genes implicated in HPAH include ACVR1, BMPR1, CAV1, ENG and SMAD9 and CBLN2. (However, the majority of patients carrying an HPAH mutation do not develop PAH). Idiopathic pulmonary arterial hypertension (IFPAH) refers to those cases of pulmonary arterial hypertension in which etiology remains unknown.","definition_xrefs":["Orphanet:422"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic respiratory disease (obsolete MONDO:0015510)","termid":"MONDO:0015510"}],"gene_count":0,"genotype_count":0,"name":"obsolete idiopathic and/or familial pulmonary arterial hypertension (obsolete MONDO:0008347)","synonyms":[{"name":"IFPAH","type":"exact"},{"name":"PPH1","type":"related"},{"name":"idiopathic and/or familial pulmonary arterial hypertension","type":"exact"},{"name":"pulmonary hypertension, primary, 1","type":"related"},{"name":"pulmonary hypertension, primary, type 1","type":"exact"}],"termid":"MONDO:0008347","xrefs":{"Monarch":{"xref_id":"0008347"}}}


id: GO:0052857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-NADPHX = (S)-NADPHX.","definition_xrefs":["PMID:21994945"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPHX epimerase activity (obsolete GO:0052857)","secondary_identifiers":["Reactome:R-HSA-6806966"],"termid":"GO:0052857"}


id: PBO:0026712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_in_stationary_phase_upon_glucose_starvation","termid":"PBO:0026712"}


id: PBO:0031695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_import","termid":"PBO:0031695"}


id: PBO:0085372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pH sensor molecule, component of the RIM101 pathway; has a role in cell wall construction and alkaline pH response; is glycosylated and phosphorylated; interacts with Dfg16p and Rim9p to form a pH-sensing complex; localization to the plasma membrane is dependent on Dfg16p and Rim9p; has similarity to A. nidulans PalH","termid":"PBO:0085372"}


id: GO:2001014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"}


id: GO:0048687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of sprouting of an injured axon.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:lm","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"positively_regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting of injured axon","synonyms":[{"name":"activation of sprouting of injured axon","type":"narrow"},{"name":"stimulation of sprouting of injured axon","type":"narrow"},{"name":"up regulation of sprouting of injured axon","type":"exact"},{"name":"up-regulation of sprouting of injured axon","type":"exact"},{"name":"upregulation of sprouting of injured axon","type":"exact"}],"termid":"GO:0048687"}


id: PBO:0055430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2860","termid":"PBO:0055430"}


id: PBO:0084073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase with similarity to translation release factors; together with binding partner Dom34p, facilitates ribosomal subunit dissociation and peptidyl-tRNA release when translation is stalled, particularly in 3' UTRs; genetically implicated in mRNA no-go decay; HBS1 has a paralog, SKI7, that arose from the whole genome duplication","termid":"PBO:0084073"}


id: MONDO:0009038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis-fibular aplasia is an extremely rare genetic disease, reported in only 2 brothers to date, characterized by the combination of craniosynostosis (involving both coronal sutures), congenital absence of the fibula, cryptorchidism, and bilateral simian creases. Intelligence is normal and an autosomal recessive mode of inheritance has been proposed. There have been no further reports in the literature since 1972.","definition_xrefs":["Orphanet:1533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis-fibular aplasia syndrome","secondary_identifiers":["SCTID:732250002","MESH:C565665","UMLS:C1857492","MEDGEN:347468","OMIM:218550"],"synonyms":[{"name":"Lowry syndrome","type":"exact"},{"name":"craniosynostosis with fibular aplasia","type":"related"}],"termid":"MONDO:0009038","xrefs":{"Monarch":{"xref_id":"0009038"}}}


id: FYPO:0002665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"}


id: PBO:0071530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 33","termid":"PBO:0071530"}


id: MONDO:0032876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with absent language and variable seizures","secondary_identifiers":["MEDGEN:1684803","UMLS:C5231469","OMIM:618707"],"synonyms":[{"name":"Ito-Raymond Syndrome","type":"related"},{"name":"NEDALVS","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH ABSENT LANGUAGE AND VARIABLE SEIZURES","type":"related"}],"termid":"MONDO:0032876","xrefs":{"Monarch":{"xref_id":"0032876"}}}


id: GO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"regulation of APP biosynthesis","type":"exact"},{"name":"regulation of APP biosynthetic process","type":"exact"},{"name":"regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"regulation of amyloid precursor protein formation","type":"exact"},{"name":"regulation of amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042984"}


id: PBO:0054519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1919","termid":"PBO:0054519"}


id: PBO:0088192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0088192"}


id: PBO:0050119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 29","termid":"PBO:0050119"}


id: GO:0071351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-18","termid":"GO:0070673"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-18","synonyms":[{"name":"cellular response to IL-18","type":"exact"}],"termid":"GO:0071351"}


id: PBO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitochondrial_transport","termid":"PBO:0031713"}


id: MONDO:0012144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome type 2 in which the cause of the disease is a mutation in the SNAI2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2D","secondary_identifiers":["DOID:0110952","OMIM:608890","UMLS:C1837203","MEDGEN:323102","MESH:C563839"],"synonyms":[{"name":"SNAI2 Waardenburg syndrome type 2","type":"exact"},{"name":"WS2D","type":"exact"},{"name":"Waardenburg syndrome type 2 caused by mutation in SNAI2","type":"exact"},{"name":"Waardenburg syndrome type IID","type":"exact"},{"name":"Waardenburg syndrome, type 2D","type":"related"}],"termid":"MONDO:0012144","xrefs":{"Monarch":{"xref_id":"0012144"}}}


id: PBO:0070346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 19","termid":"PBO:0070346"}


id: GO:0048759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vessel member cell. A vessel member cell is one of the components of a vessel in the xylem. It is a dead cell with the wall between adjacent members being variously perforated and the walls that persist variously thickened.","definition_xrefs":["GOC:jid","PO:0002003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheary element differentiation","termid":"GO:1905177"},{"relation_name":"part_of","term_name":"xylem development","termid":"GO:0010089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylem vessel member cell differentiation","synonyms":[{"name":"vessel element cell differentiation","type":"broad"},{"name":"vessel member cell differentiation","type":"broad"}],"termid":"GO:0048759"}


id: MONDO:0008487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder that manifests as multiple cysts on the ovaries. It results in hormonal imbalances and leads to irregular and abnormal menstrual periods, excess growth of hair, acne eruptions and obesity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic ovary syndrome","secondary_identifiers":["NANDO:2200409","MEDGEN:10836","icd11.foundation:1213633323","NANDO:2100149","SCTID:69878008","UMLS:C0032460","ICD9:256.4","EFO:0000660","DOID:11612","MESH:D011085","OMIM:184700","Orphanet:3185","NCIT:C26862"],"synonyms":[{"name":"PCO1","type":"related"},{"name":"PCOS","type":"exact"},{"name":"PCOS1","type":"narrow"},{"name":"Stein-Leventhal synd.","type":"exact"},{"name":"Stein-Leventhal syndrome","type":"exact"},{"name":"hyperandrogenemia","type":"related"},{"name":"multicystic ovaries","type":"exact"},{"name":"polycystic ovarian disease","type":"exact"},{"name":"polycystic ovaries","type":"exact"},{"name":"polycystic ovary","type":"exact"},{"name":"polycystic ovary syndrome","type":"exact"},{"name":"polycystic ovary syndrome 1","type":"narrow"}],"termid":"MONDO:0008487","xrefs":{"Monarch":{"xref_id":"0008487"}}}


id: PATO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000457 deviation(from_normal) value (obsolete PATO:0000457)","termid":"PATO:0000457"}


id: GO:0050390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + H+ = 2-methylpropanamine + CO2.","definition_xrefs":["EC:4.1.1.14","RHEA:18989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"valine decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r1052","MetaCyc:VALINE-DECARBOXYLASE-RXN","KEGG_REACTION:R01437"],"synonyms":[{"name":"L-valine carboxy-lyase (2-methylpropanamine-forming)","type":"related"},{"name":"L-valine carboxy-lyase activity","type":"related"},{"name":"leucine decarboxylase activity","type":"related"}],"termid":"GO:0050390"}


id: PBO:0056343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 2","termid":"PBO:0056343"}


id: FYPO:0008113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which introns are retained at some, but not all introns at a higher level with increased frequency. Weak donor sequences are more affected.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased intron retention","termid":"FYPO:0008113"}


id: PBO:0030919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subcellular_component_during_vegetative_growth","termid":"PBO:0030919"}


id: PBO:0061922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 2 pseudogene","termid":"PBO:0061922"}


id: SO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute to describe a feature that is independently known - not predicted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"independently_known","synonyms":[{"name":"independently known","type":"exact"}],"termid":"SO:0000906"}


id: GO:0060894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a limb spinous cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell fate specification","termid":"GO:0009957"},{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"limb epidermis stratification","termid":"GO:0060888"},{"relation_name":"part_of","term_name":"limb spinous cell differentiation","termid":"GO:0060890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb spinous cell fate specification","termid":"GO:0060894"}


id: RO:HOM0000025
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"1:many orthology that involves a gene in species A and one of its ortholog in species B, when duplications more recent than the species split have occurred in species B but not in species A.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_many_orthology_relationship_with","termid":"RO:HOM0000034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_pro-orthology_relationship_with","synonyms":[{"name":"pro-orthologous to","type":"exact"}],"termid":"RO:HOM0000025"}


id: GO:1905863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an invadopodium.","definition_xrefs":["GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium organization (obsolete GO:1905863)","termid":"GO:1905863"}


id: GO:0034827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene + O2 = 4-(2-oxocyclohexyl)-2-hydroxy-buta-2,4-dienoate + H+.","definition_xrefs":["UM-BBD_reactionID:r1171"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene extradiol dioxygenase activity (obsolete GO:0034827)","termid":"GO:0034827"}


id: GO:0007058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle during meiosis II of a meiotic cell cycle in females. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in female meiosis","termid":"GO:0007056"},{"relation_name":"part_of","term_name":"female meiosis II","termid":"GO:0007147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044085","GO:0140013","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"spindle assembly involved in female meiosis II","synonyms":[{"name":"female meiosis II spindle assembly","type":"related"}],"termid":"GO:0007058"}


id: PBO:0082944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic heavy chain dynein; microtubule motor protein; member of the AAA+ protein family, required for anaphase spindle elongation; involved in spindle assembly, chromosome movement, and spindle orientation during cell division, targeted to microtubule tips by Pac1p; motility along microtubules inhibited by She1p","termid":"PBO:0082944"}


id: GO:0060341
data:
  {"annotated_genes":["SJAG_03602","SJAG_02392","SJAG_03970","SJAG_01084","SJAG_01166","SJAG_02645","SJAG_04312","SJAG_02074","SJAG_00883","SJAG_04597","SJAG_02592","SJAG_03048","SJAG_03453","SJAG_04464","SJAG_01373","SJAG_04509","SJAG_01805","SJAG_04343","SJAG_01245","SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[105613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[90718,95614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[94168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[107033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[114276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[95615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[94173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[101640,100227,93565,110807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[90604,102173,94131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[98215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[87644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[76347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[91777,87648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[107755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"},{"annotations":[103113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905634"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process in which a cell, a substance, or a cellular entity is transported to, or maintained in a specific location within or in the membrane of a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01084":null,"SJAG_01166":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01805":null,"SJAG_02074":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02645":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03602":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cellular localisation","type":"exact"}],"termid":"GO:0060341","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0060628":null,"GO:0120047":null,"GO:0140325":null,"GO:1900181":null,"GO:1902543":null,"GO:1902854":null,"GO:1903067":null,"GO:1903077":null,"GO:1905391":null,"GO:1905634":null,"GO:2001135":null}}


id: PR:000027596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:20929775","PMID:11242054","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3","termid":"PR:000027595"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3","type":"exact"}],"termid":"PR:000027596"}


id: PBO:0030855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tacrolimus","termid":"PBO:0030855"}


id: PBO:0042770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP72 divergent transcript","termid":"PBO:0042770"}


id: PBO:0029857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spheroid_vegetative_cell","termid":"PBO:0029857"}


id: MONDO:0004832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the lower part of the esophagus. It is the most common mesenchymal neoplasm of the esophagus. Dysphagia is a frequent clinical symptom.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of esophagus","termid":"MONDO:0021459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagus leiomyoma","secondary_identifiers":["MEDGEN:65947","SCTID:276805005","UMLS:C0238114","NCIT:C3866","DOID:960"],"synonyms":[{"name":"esophageal leiomyoma","type":"exact"},{"name":"esophagus leiomyoma","type":"exact"},{"name":"leiomyoma of esophagus","type":"exact"},{"name":"leiomyoma of oesophagus","type":"exact"},{"name":"leiomyoma of the esophagus","type":"exact"},{"name":"leiomyoma of the oesophagus","type":"exact"}],"termid":"MONDO:0004832","xrefs":{"Monarch":{"xref_id":"0004832"}}}


id: PBO:0050745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 7","termid":"PBO:0050745"}


id: PBO:0069724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1005, pseudogene","termid":"PBO:0069724"}


id: GO:0046713
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"}]},"cv_name":"biological_process","definition":"The directed movement of borate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["PMID:21710975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"borate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"boron transport","type":"related"}],"termid":"GO:0046713","terms_by_termid":{"GO:0140159":null}}


id: PBO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0003116"}


id: MONDO:0003619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of the fallopian tube. It is most often caused by Neisseria gonorrhoeae and Chlamydia trachomatis infections. The infections usually originate in the vagina and ascend to the fallopian tube. Symptoms include abdominal, pelvic, and lower back pain, pain during ovulation and sexual intercourse, fever, nausea, and vomiting. Complications include infertility and ectopic pregnancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"fallopian tube disorder","termid":"MONDO:0002156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salpingitis","secondary_identifiers":["SCTID:88157006","MEDGEN:20646","DOID:5733","UMLS:C0036130","MESH:D012488","NCIT:C26880"],"synonyms":[{"name":"fallopian tube inflammation","type":"exact"},{"name":"inflammation of fallopian tube","type":"exact"}],"termid":"MONDO:0003619","xrefs":{"Monarch":{"xref_id":"0003619"}}}


id: GO:0035607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor-type receptor binding to one of its physiological ligands, which contributes to the progression of the orbitofrontal cortex over time from its initial formation until its mature state.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"orbitofrontal cortex development","termid":"GO:0021769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development","synonyms":[{"name":"FGF receptor signaling pathway involved in orbitofrontal cortex development","type":"exact"},{"name":"FGFR signaling pathway involved in orbitofrontal cortex development","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in orbitofrontal cortex development","type":"exact"}],"termid":"GO:0035607"}


id: PBO:0058065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4284","termid":"PBO:0058065"}


id: MONDO:0054836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete parkinsonism-dystonia, infantile, 2 (obsolete MONDO:0054836)","termid":"MONDO:0054836","xrefs":{"Monarch":{"xref_id":"0054836"}}}


id: PBO:0004105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit D (predicted)","termid":"PBO:0004105"}


id: PBO:0011182
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"approved_timestamp","termid":"PBO:0011182"}


id: MONDO:0014959
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86942],"is_not":false,"summary":null,"term":"MONDO:0014959"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 12A (cardiomyopathic type), autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080130","OMIM:617184","MEDGEN:934643","UMLS:C4310676"],"synonyms":[{"name":"MTDPS12A","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12A (cardiomyopathic type) AD","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12a (cardiomyopathic type), autosomal dominant","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12a (cardiomyopathic type), autosomal dominant; MTDPS12A","type":"exact"}],"termid":"MONDO:0014959","terms_by_termid":{"MONDO:0014959":null},"xrefs":{"Monarch":{"xref_id":"0014959"}}}


id: GO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in).","definition_xrefs":["TC:2.A.28.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"},{"relation_name":"is_a","term_name":"monocarboxylate:sodium symporter activity","termid":"GO:0140161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"bile acid:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-194121","Reactome:R-HSA-194187","Reactome:R-HSA-433089"],"synonyms":[{"name":"sodium/bile acid symporter activity","type":"exact"}],"termid":"GO:0008508"}


id: GO:0007072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis (obsolete GO:0007072)","synonyms":[{"name":"activation of transcription on exit from mitosis","type":"narrow"}],"termid":"GO:0007072"}


id: PBO:0071615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 33","termid":"PBO:0071615"}


id: PBO:0075945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3","termid":"PBO:0075945"}


id: GO:0051040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules","termid":"GO:0016338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium-independent cell-cell adhesion","termid":"GO:0051040"}


id: SO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeating dinucleotide sequence (two bases).","direct_ancestors":[{"relation_name":"is_a","term_name":"microsatellite","termid":"SO:0000289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dinucleotide_repeat_microsatellite_feature","synonyms":[{"name":"dinucleotide repeat microsatellite","type":"exact"},{"name":"dinucleotide repeat microsatellite feature","type":"exact"},{"name":"dinucleotide repeat microsatellite locus","type":"exact"},{"name":"dinucleotide repeat microsatellite marker","type":"exact"}],"termid":"SO:0000290"}


id: GO:0071246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chlorate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chlorate","termid":"GO:0010157"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chlorate","termid":"GO:0071246"}


id: MONDO:0005632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vaso-occlusive crisis of the pulmonary vasculature occurring in patients with sickle cell disease. It is characterized by the presence of a new radiodensity on a chest radiograph accompanied by fever, cough, sputum production, dyspnea, or hypoxia.","definition_xrefs":["NCIT:C138179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute chest syndrome","secondary_identifiers":["SCTID:372146004","ICD9:517.3","MESH:D056586","UMLS:C0742343","MEDGEN:196643","DOID:1584","EFO:0007129"],"synonyms":[{"name":"ACS","type":"exact"},{"name":"acute chest syndrome in sickle cell disease","type":"exact"}],"termid":"MONDO:0005632","xrefs":{"Monarch":{"xref_id":"0005632"}}}


id: PBO:0053625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 668","termid":"PBO:0053625"}


id: PBO:0079533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear RNA auxiliary factor 2","termid":"PBO:0079533"}


id: PR:Q9P7V3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10741:SF2","OMA:SCHPO01818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.03c","secondary_identifiers":["UniProtKB:Q9P7V3"],"synonyms":[{"name":"Spom972h-TSN","type":"exact"},{"name":"meiotically up-regulated gene 90 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translin homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7V3"}


id: GO:1905530
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87837],"is_not":false,"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of uracil import across plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:26536126","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of uracil import across plasma membrane","termid":"GO:1905529"},{"relation_name":"negatively_regulates","term_name":"uracil import across plasma membrane","termid":"GO:0098721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905530","terms_by_termid":{"GO:1905530":null}}


id: PBO:0082410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bHLH protein with similarity to myc-family transcription factors; overexpression confers hyperfilamentous growth and suppresses the pseudohyphal filamentation defect of a diploid mep1 mep2 homozygous null mutant","termid":"PBO:0082410"}


id: GO:0014043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron maturation","synonyms":[{"name":"down regulation of neuron maturation","type":"exact"},{"name":"down-regulation of neuron maturation","type":"exact"},{"name":"downregulation of neuron maturation","type":"exact"},{"name":"inhibition of neuron maturation","type":"narrow"}],"termid":"GO:0014043"}


id: PBO:0051786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F4, pseudogene","termid":"PBO:0051786"}


id: PBO:0058732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6859-2","termid":"PBO:0058732"}


id: GO:0009767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring as part of photosynthesis, in which light provides the energy for a series of electron carriers to operate together to transfer electrons and generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:mtg_electron_transport","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transport chain","termid":"GO:0022900"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthetic electron transport chain","secondary_identifiers":["GO:0009775","GO:0009774","GO:0009776"],"synonyms":[{"name":"electron carrier, chlorophyll electron transport system","type":"exact"},{"name":"photosynthetic electron transport in cytochrome b6/f","type":"narrow"},{"name":"photosynthetic electron transport in plastocyanin","type":"narrow"},{"name":"photosynthetic electron transport in plastoquinone","type":"narrow"}],"termid":"GO:0009767"}


id: PBO:0090098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Rst2","termid":"PBO:0090098"}


id: GO:0010942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cell death (obsolete GO:0010942)","termid":"GO:0010942"}


id: PBO:0077433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM167B divergent transcript","termid":"PBO:0077433"}


id: PBO:0110421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIAL1 pseudogene","termid":"PBO:0110421"}


id: GO:0015946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of methanol to methyl-Coenzyme M.","definition_xrefs":["MetaCyc:CO2FORM-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methanol oxidation","termid":"GO:0015946"}


id: PBO:0070082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 39, pseudogene","termid":"PBO:0070082"}


id: PBO:0042584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDPF1 pseudogene 1","termid":"PBO:0042584"}


id: GO:0008910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + kanamycin = ADP + 2 H+ + kanamycin 3'-phosphate.","definition_xrefs":["EC:2.7.1.95","RHEA:24256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"kanamycin kinase activity","secondary_identifiers":["MetaCyc:KANAMYCIN-KINASE-RXN","KEGG_REACTION:R01888"],"synonyms":[{"name":"APH(3') activity","type":"broad"},{"name":"ATP:kanamycin 3'-O-phosphotransferase activity","type":"related"},{"name":"aminoglycoside 3'-phosphotransferase activity","type":"broad"},{"name":"kanamycin kinase (phosphorylating)","type":"related"},{"name":"neomycin phosphotransferase activity","type":"related"},{"name":"neomycin-kanamycin phosphotransferase activity","type":"related"}],"termid":"GO:0008910"}


id: PBO:0066641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal modification protein rimK like family member B pseudogene 2","termid":"PBO:0066641"}


id: MONDO:0013562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspergillosis, susceptibility to","secondary_identifiers":["OMIM:614079","UMLS:C3279774","MEDGEN:481404"],"synonyms":[{"name":"aspergillosis, susceptibility to","type":"exact"},{"name":"susceptibility to aspergillosis","type":"related"}],"termid":"MONDO:0013562","xrefs":{"Monarch":{"xref_id":"0013562"}}}


id: PBO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 9","termid":"PBO:0071677"}


id: MONDO:0003120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that arises from the testis and is characterized by the presence of more than one histologic component. Representative examples include mixed choriocarcinoma and embryonal carcinoma, mixed embryonal carcinoma and seminoma, and mixed yolk sac tumor and teratoma.","definition_xrefs":["NCIT:C6347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant testicular germ cell tumor","termid":"MONDO:0003510"},{"relation_name":"is_a","term_name":"mixed germ cell tumor","termid":"MONDO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed testicular germ cell cancer","secondary_identifiers":["UMLS:C1336720","MEDGEN:237005","DOID:4743","ONCOTREE:MGCT"],"synonyms":[{"name":"mixed germ cell neoplasm of testis","type":"related"},{"name":"mixed germ cell neoplasm of the testis","type":"related"},{"name":"mixed germ cell tumor","type":"related"},{"name":"mixed germ cell tumor of testis","type":"related"},{"name":"mixed germ cell tumor of the testis","type":"related"},{"name":"mixed germ cell tumour","type":"related"},{"name":"mixed germ cell tumour of testis","type":"related"},{"name":"mixed germ cell tumour of the testis","type":"related"},{"name":"mixed testicular germ cell tumor","type":"related"},{"name":"mixed testicular germ cell tumour","type":"related"},{"name":"testicular germ cell tumor (mixed)","type":"related"},{"name":"testicular germ cell tumour (mixed)","type":"related"},{"name":"testicular mixed germ cell neoplasm","type":"related"},{"name":"testicular mixed germ cell tumor","type":"related"},{"name":"testicular mixed germ cell tumour","type":"related"},{"name":"testis mixed germ cell tumor","type":"related"},{"name":"testis mixed germ cell tumour","type":"related"}],"termid":"MONDO:0003120","xrefs":{"Monarch":{"xref_id":"0003120"}}}


id: PR:O74840
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cue2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smr domain-containing protein C1235.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.03","synonyms":[{"name":"Spom972h-cue2","type":"exact"}],"termid":"PR:O74840"}


id: PBO:0053855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1124","termid":"PBO:0053855"}


id: MONDO:0019481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete follicular dendritic cell sarcoma (obsolete MONDO:0019481)","termid":"MONDO:0019481","xrefs":{"Monarch":{"xref_id":"0019481"}}}


id: GO:0080164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.","definition_xrefs":["GOC:DHL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"}


id: MONDO:0100176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder associated with variation(s) in the AP4 genes: AP4B1, AP4E1, AP4M1, and AP4S1. The phenotypes observed in individuals with genetic variants in these genes are often complex and include intellectual disability, spastic paraplegia, microcephaly, brain abnormalities, and seizures.","definition_xrefs":["PMID:29430868","PMID:30543385","PMID:32171285","PMID:29193663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-4 deficiency syndrome","synonyms":[{"name":"AP-4 deficiency syndrome","type":"exact"}],"termid":"MONDO:0100176","xrefs":{"Monarch":{"xref_id":"0100176"}}}


id: GO:0019267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine from other compounds, including cysteine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine biosynthetic process","termid":"GO:0006529"},{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"asparagine biosynthetic process from cysteine","secondary_identifiers":["MetaCyc:ASPSYNII-PWY"],"synonyms":[{"name":"asparagine anabolism from cysteine","type":"exact"},{"name":"asparagine formation from cysteine","type":"exact"},{"name":"asparagine synthesis from cysteine","type":"exact"}],"termid":"GO:0019267"}


id: GO:0039659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of the host TBK1-IKBKE-DDX3 complex.","definition_xrefs":["VZ:719"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host TBK1-IKBKE-DDX3 complex activity (obsolete GO:0039659)","synonyms":[{"name":"inhibition of host TBK1-IKBKE-DDX3 complex by virus","type":"exact"},{"name":"suppression by virus of host TBK1-IKKE-DDX3 complex activity","type":"exact"}],"termid":"GO:0039659"}


id: PBO:0089266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MutS protein Msh1","termid":"PBO:0089266"}


id: GO:0009740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of gibberellic acid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin mediated signaling pathway","termid":"GO:0010476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gibberellic acid mediated signaling pathway","synonyms":[{"name":"GA-signaling","type":"exact"},{"name":"gibberellic acid mediated signalling","type":"exact"},{"name":"gibberellic acid signaling","type":"exact"}],"termid":"GO:0009740"}


id: GO:0004045
data:
  {"annotated_genes":["SJAG_00936","SJAG_00308","SJAG_05221","SJAG_05008"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75758,77571,98437,101861],"is_not":false,"summary":null,"term":"GO:0004045"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA.","definition_xrefs":["EC:3.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00936":null,"SJAG_05008":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016787","GO:0003674","GO:0016788","GO:0140101"],"is_obsolete":false,"name":"aminoacyl-tRNA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019851","RHEA:54448","MetaCyc:AMINOCYL-TRNA-HYDROLASE-RXN","GO:0019850"],"synonyms":[{"name":"D-tyrosyl-tRNA hydrolase activity","type":"narrow"},{"name":"N-substituted aminoacyl transfer RNA hydrolase activity","type":"related"},{"name":"aminoacyl-tRNA aminoacylhydrolase activity","type":"related"},{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"},{"name":"aminoacyl-transfer ribonucleate hydrolase activity","type":"related"},{"name":"peptidyl-tRNA hydrolase activity","type":"related"}],"termid":"GO:0004045","terms_by_termid":{"GO:0004045":null}}


id: GO:0036051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the trailing edge. The trailing edge is the area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pf","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to trailing edge","synonyms":[{"name":"protein localisation to trailing edge","type":"exact"}],"termid":"GO:0036051"}


id: PBO:0016053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, Prp19 complex subunit Cdc5","termid":"PBO:0016053"}


id: PBO:0091914
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING Finger Protein","termid":"PBO:0091914"}


id: MONDO:0005915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yeast infection usually manifested as a superficial skin infection. It may also present as a systemic infection in patients who are receiving total parenteral nutrition.","definition_xrefs":["NCIT:C82981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"},{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"},{"relation_name":"is_a","term_name":"superficial mycosis","termid":"MONDO:0024268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis versicolor","secondary_identifiers":["EFO:0007439","DOID:9060","ICD10CM:B36.0","ICD9:111.0","MESH:D014010","SCTID:56454009","UMLS:C0040262","icd11.foundation:67108853","MEDGEN:11826"],"synonyms":[{"name":"Malassezia furfur infection","type":"exact"},{"name":"infection by Pityrosporum furfur","type":"exact"},{"name":"infections, Malassezia furfur","type":"related"},{"name":"tinea flava","type":"related"},{"name":"tinea versicolor","type":"related"}],"termid":"MONDO:0005915","xrefs":{"Monarch":{"xref_id":"0005915"}}}


id: PBO:0082861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm B; part of heteroheptameric complex (with Smd1p, Smd2p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm B and Sm B'","termid":"PBO:0082861"}


id: GO:0061971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of another structural tissue into bone.","definition_xrefs":["PMID:29852585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"replacement bone morphogenesis","termid":"GO:0061971"}


id: MONDO:0011390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the TRPC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 2","secondary_identifiers":["DOID:0111129","GARD:15362","MEDGEN:349053","OMIM:603965","UMLS:C1858915","MESH:C565831"],"synonyms":[{"name":"FSGS2","type":"exact"},{"name":"TRPC6 focal segmental glomerulosclerosis","type":"exact"},{"name":"focal segmental glomerulosclerosis 2","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in TRPC6","type":"exact"},{"name":"focal segmental glomerulosclerosis type 2","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 2","type":"related"}],"termid":"MONDO:0011390","xrefs":{"Monarch":{"xref_id":"0011390"}}}


id: PBO:0043792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylation element binding protein 3","termid":"PBO:0043792"}


id: PBO:0085514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15 and bacterial S19","termid":"PBO:0085514"}


id: GO:0010159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which information that determines the correct position at which animal organ primordia are formed is generated and perceived resulting in correct positioning of the new animal organ.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ position","termid":"GO:0010159"}


id: PBO:0088321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor subunit Rrn6","termid":"PBO:0088321"}


id: PBO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase A","termid":"PBO:0048774"}


id: GO:1901703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization that is involved in auxin polar transport.","definition_xrefs":["PMID:23163883","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization involved in auxin polar transport","synonyms":[{"name":"establishment and maintenance of protein localization involved in auxin polar transport","type":"exact"},{"name":"protein localisation involved in auxin polar transport","type":"exact"}],"termid":"GO:1901703"}


id: MONDO:1012829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in cattle due to a mutation in the DSP gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, cattle","termid":"MONDO:1011541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, DSP-related, cattle","secondary_identifiers":["OMIA:002243-9913"],"termid":"MONDO:1012829","xrefs":{"Monarch":{"xref_id":"1012829"}}}


id: PBO:0028794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Argonaute-associated_RNA_length","termid":"PBO:0028794"}


id: GO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem development, the biological process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem development","termid":"GO:0048509"}


id: PBO:0050789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3C","termid":"PBO:0050789"}


id: GO:0035999
data:
  {"annotated_genes":["SJAG_03914","SJAG_01126","SJAG_03712","SJAG_01766","SJAG_01616","SJAG_01466","SJAG_04156","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59272,60909,70466,71536,72219,75562,76281,104582],"is_not":false,"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways by which one-carbon (C1) units are transferred between tetrahydrofolate molecules, to synthesize other tetrahydrofolate molecules.","definition_xrefs":["PMID:1825999","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon metabolic process","termid":"GO:0006730"},{"relation_name":"is_a","term_name":"tetrahydrofolate metabolic process","termid":"GO:0046653"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01126":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolate interconversion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-2201"],"termid":"GO:0035999","terms_by_termid":{"GO:0035999":null}}


id: MONDO:0014596
data:
  {"annotated_genes":["SJAG_01825"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85018],"is_not":false,"summary":null,"term":"MONDO:0014596"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 7 with cerebellar hypoplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616342","UMLS:C4225359","DOID:0112231","MEDGEN:895680"],"synonyms":[{"name":"LIS7","type":"related"},{"name":"lissencephaly 7 with cerebellar hypoplasia","type":"exact"}],"termid":"MONDO:0014596","terms_by_termid":{"MONDO:0014596":null},"xrefs":{"Monarch":{"xref_id":"0014596"}}}


id: GO:0008643
data:
  {"annotated_genes":["SJAG_04905","SJAG_03606","SJAG_03820","SJAG_03960","SJAG_03608","SJAG_02958","SJAG_00057","SJAG_04068"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60603,58245,60654,64400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034219"},{"annotations":[110442,113978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[117020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[110443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[102770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008645"},{"annotations":[95528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[95530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"carbohydrate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0008644","GO:0006861"],"synonyms":[{"name":"sugar transport","type":"narrow"}],"termid":"GO:0008643","terms_by_termid":{"GO:0008645":null,"GO:0034219":null,"GO:0046323":null,"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: GO:0005161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a platelet-derived growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"platelet-derived growth factor receptor binding","synonyms":[{"name":"PDGF","type":"narrow"},{"name":"PDGF receptor binding","type":"exact"},{"name":"PDGFR binding","type":"exact"},{"name":"platelet-derived growth factor","type":"narrow"},{"name":"platelet-derived growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005161"}


id: MONDO:0001697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A learning disability involving difficulty reading resulting primarily from neurological factors which affect any part of the reading process.","definition_xrefs":["DOID:13365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning disability","termid":"MONDO:0004681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reading disorder","secondary_identifiers":["SCTID:52824009","ICD9:315.09","ICD9:315.00"],"termid":"MONDO:0001697","xrefs":{"Monarch":{"xref_id":"0001697"}}}


id: GO:1900885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane biosynthetic process","termid":"GO:1900884"},{"relation_name":"is_a","term_name":"negative regulation of tridecane metabolic process","termid":"GO:1900894"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"negatively_regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tridecane biosynthetic process","synonyms":[{"name":"down regulation of tridecane anabolism","type":"exact"},{"name":"down regulation of tridecane biosynthesis","type":"exact"},{"name":"down regulation of tridecane biosynthetic process","type":"exact"},{"name":"down regulation of tridecane formation","type":"exact"},{"name":"down regulation of tridecane synthesis","type":"exact"},{"name":"down-regulation of tridecane anabolism","type":"exact"},{"name":"down-regulation of tridecane biosynthesis","type":"exact"},{"name":"down-regulation of tridecane biosynthetic process","type":"exact"},{"name":"down-regulation of tridecane formation","type":"exact"},{"name":"down-regulation of tridecane synthesis","type":"exact"},{"name":"downregulation of tridecane anabolism","type":"exact"},{"name":"downregulation of tridecane biosynthesis","type":"exact"},{"name":"downregulation of tridecane biosynthetic process","type":"exact"},{"name":"downregulation of tridecane formation","type":"exact"},{"name":"downregulation of tridecane synthesis","type":"exact"},{"name":"inhibition of tridecane anabolism","type":"narrow"},{"name":"inhibition of tridecane biosynthesis","type":"narrow"},{"name":"inhibition of tridecane biosynthetic process","type":"narrow"},{"name":"inhibition of tridecane formation","type":"narrow"},{"name":"inhibition of tridecane synthesis","type":"narrow"},{"name":"negative regulation of tridecane anabolism","type":"exact"},{"name":"negative regulation of tridecane biosynthesis","type":"exact"},{"name":"negative regulation of tridecane formation","type":"exact"},{"name":"negative regulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900885"}


id: PBO:0077600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPRSS11B N-terminal like, pseudogene","termid":"PBO:0077600"}


id: PBO:0039242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDH1A2 antisense RNA 1","termid":"PBO:0039242"}


id: FYPO:0004174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur in cells of the h+ mating type.","definition_xrefs":["PMID:9003326","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"FYPO:0000280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"h+ specific sterility","synonyms":[{"name":"h+-specific sterility","type":"exact"},{"name":"h-plus-specific mating defect","type":"related"},{"name":"h-plus-specific sterility","type":"exact"}],"termid":"FYPO:0004174"}


id: MONDO:0004330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma arising from the leptomeninges.","definition_xrefs":["NCIT:C8312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant leptomeningeal tumor","termid":"MONDO:0003762"},{"relation_name":"is_a","term_name":"meningeal sarcoma","termid":"MONDO:0004308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"leptomeningeal sarcoma","secondary_identifiers":["DOID:7689","UMLS:C1384416","MEDGEN:235139"],"synonyms":[{"name":"leptomeningeal sarcoma","type":"exact"},{"name":"leptomeninges sarcoma","type":"related"},{"name":"leptomeninx sarcoma","type":"exact"},{"name":"sarcoma of leptomeninges","type":"exact"},{"name":"sarcoma of leptomeninx","type":"exact"},{"name":"sarcoma of the leptomeninges","type":"exact"},{"name":"sarcoma, leptomeningeal, malignant","type":"exact"},{"name":"sarcoma, meningeal","type":"exact"}],"termid":"MONDO:0004330","xrefs":{"Monarch":{"xref_id":"0004330"}}}


id: GO:0047976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-hamamelose + ATP = D-hamamelose 2'-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:22796","EC:2.7.1.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"hamamelose kinase activity","secondary_identifiers":["KEGG_REACTION:R03766","MetaCyc:HAMAMELOSE-KINASE-RXN"],"synonyms":[{"name":"ATP/hamamelose 2'-phosphotransferase activity","type":"related"},{"name":"ATP:D-hamamelose 2'-phosphotransferase activity","type":"related"},{"name":"hamamelose kinase (phosphorylating)","type":"related"},{"name":"hamamelosekinase (ATP: hamamelose 2'-phosphotransferase)","type":"related"}],"termid":"GO:0047976"}


id: PBO:0029979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_nucleus","termid":"PBO:0029979"}


id: PBO:0109136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHOX homeobox 2","termid":"PBO:0109136"}


id: GO:1905899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle tissue development.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:14709716","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"smooth muscle tissue development","termid":"GO:0048745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle tissue development","termid":"GO:1905899"}


id: PBO:0051927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB8 antisense RNA 1","termid":"PBO:0051927"}


id: PBO:0004813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase subunit Arg5 (predicted)","termid":"PBO:0004813"}


id: GO:0035167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of blood cells from the larval lymph gland. The lymph gland consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages.","definition_xrefs":["PMID:12445385","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic hemopoiesis","termid":"GO:0035166"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"},{"relation_name":"part_of","term_name":"lymph gland development","termid":"GO:0048542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval lymph gland hemopoiesis","synonyms":[{"name":"larval lymph gland haematopoiesis","type":"exact"},{"name":"larval lymph gland haemopoiesis","type":"exact"},{"name":"larval lymph gland hematopoiesis","type":"exact"}],"termid":"GO:0035167"}


id: SO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the alteration of codon meaning.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon_redefined","synonyms":[{"name":"codon redefined","type":"exact"}],"termid":"SO:0000882"}


id: PBO:0079857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B6 (pseudogene)","termid":"PBO:0079857"}


id: MONDO:8000002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discitis caused by infection with Escherichia coli.","definition_xrefs":["PMID:27070599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"},{"relation_name":"is_a","term_name":"escherichia coli infection","termid":"MONDO:0020920"},{"relation_name":"is_a","term_name":"infectious discitis","termid":"MONDO:8000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"escherichia coli discitis","termid":"MONDO:8000002","xrefs":{"Monarch":{"xref_id":"8000002"}}}


id: PBO:0028562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_meiotic_sister_chromatid_segregation","termid":"PBO:0028562"}


id: PBO:0087511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa2p; required for import of long-chain fatty acids into peroxisomes; similar to human adrenoleukodystrophy transporters ABCD1and ABCD2, and ALD-related proteins; mutations in ABCD1 cause X-linked adrenoleukodystrophy (X-ALD), a peroxisomal disorder; human ABCD1 and ABCD2 can each partially complement yeast pxa1 pxa2 double null mutant","termid":"PBO:0087511"}


id: PBO:0042754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein W","termid":"PBO:0042754"}


id: MONDO:0015400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontonasal arteriovenous malformation is a rare vascular anomaly characterized by abnormal communication between arteries and veins, bypassing the capillary bed, located in the frontonasal area. It may present with intermittent nasal bleeding, blurred vision, pustule formation and/or disfigurement. Overlying skin may be of normal appearance or may manifest a red, pulsatile mass with local rise of temperature. Other features may include pain, ulceration, excessive growth and/or congestive heart failure.","definition_xrefs":["Orphanet:141168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial arteriovenous malformation","termid":"MONDO:0015500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontonasal arteriovenous malformation","secondary_identifiers":["MEDGEN:824839","icd11.foundation:1779519580","UMLS:C3838993","GARD:19955"],"termid":"MONDO:0015400","xrefs":{"Monarch":{"xref_id":"0015400"}}}


id: PBO:0045054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 2","termid":"PBO:0045054"}


id: MONDO:0017178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bone disease characterized by an acquired idiopathic necrotic lesion of subchondral bone with the formation of a sequestrum, which may detach to form loose bodies in joints. OCD mainly affects the knee, ankle and elbow joints and can lead to pain, functional limitations and secondary osteoarthritis.","definition_xrefs":["Orphanet:2764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondritis dissecans","secondary_identifiers":["UMLS:C0029421","icd11.foundation:467851106","NCIT:C34878","ICD9:732.7","GARD:12703","MEDGEN:10494","MESH:D010008","HP:0010886","SCTID:82562007","MedDRA:10031231","DOID:84","NORD:111730"],"synonyms":[{"name":"Koenig disease","type":"exact"},{"name":"Konig disease","type":"exact"},{"name":"König disease","type":"exact"},{"name":"OCD","type":"exact"},{"name":"OD","type":"exact"},{"name":"SSOAOD","type":"related"},{"name":"familial osteochondritis dissecans","type":"narrow"},{"name":"osteochondritis dissecans","type":"exact"},{"name":"osteochondritis dissecans (disease)","type":"exact"},{"name":"osteochondritis dissecans and short stature","type":"related"},{"name":"osteochondritis dissecans, short stature, and early-onset osteoarthritis","type":"related"},{"name":"short stature and advanced bone Age, with or without early-onset osteoarthritis and/Or osteochondritis Dissecans","type":"related"}],"termid":"MONDO:0017178","xrefs":{"Monarch":{"xref_id":"0017178"}}}


id: MONDO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tolosa-hunt syndrome (obsolete MONDO:0001581)","termid":"MONDO:0001581","xrefs":{"Monarch":{"xref_id":"0001581"}}}


id: PBO:0064472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 3, accessory subunit","termid":"PBO:0064472"}


id: GO:0030727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation, in a germarium, of a group of interconnected cells derived from a single female gonial founder cell (a cystoblast). The germarium is the most anterior portion of an insect ovariole. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:9442902","GOC:mtg_sensu","PMID:10370240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female germ-line cyst formation","termid":"GO:0048135"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived female germ-line cyst formation","synonyms":[{"name":"germarium-derived female germline cyst formation","type":"exact"}],"termid":"GO:0030727"}


id: PBO:0027485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_decreased_numbers_during_G0","termid":"PBO:0027485"}


id: MOD:00471
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-maleimide-PEO-biotin","synonyms":[{"name":"EDT-maleimide-PEO-biotin","type":"related"}],"termid":"MOD:00471"}


id: PR:Q9UTI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11549:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.04","secondary_identifiers":["UniProtKB:Q9UTI7"],"synonyms":[{"name":"Spom972h-TYMS","type":"exact"},{"name":"TS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TSase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI7"}


id: PBO:0015699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3101","termid":"PBO:0015699"}


id: GO:0046057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009184"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dADP catabolic process","synonyms":[{"name":"dADP breakdown","type":"exact"},{"name":"dADP catabolism","type":"exact"},{"name":"dADP degradation","type":"exact"}],"termid":"GO:0046057"}


id: PBO:0064431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 8","termid":"PBO:0064431"}


id: GO:0004823
data:
  {"annotated_genes":["SJAG_02015","SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75554,77721],"is_not":false,"summary":null,"term":"GO:0004823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H+ + Leu-tRNA(Leu).","definition_xrefs":["RHEA:11688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02015":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0140098","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"leucine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03657","Reactome:R-HSA-379974","Reactome:R-HSA-380200","EC:6.1.1.4","MetaCyc:LEUCINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"leucine translase activity","type":"related"},{"name":"leucine-tRNA synthetase activity","type":"related"},{"name":"leucine:tRNALeu ligase (AMP-forming)","type":"related"},{"name":"leucyl-tRNA synthetase activity","type":"exact"},{"name":"leucyl-transfer RNA synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004823","terms_by_termid":{"GO:0004823":null}}


id: PBO:0049505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 12","termid":"PBO:0049505"}


id: RO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between an arterial structure and another structure, where the arterial structure acts as a conduit channeling fluid, substance or energy.","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supplies","termid":"RO:0002178"}


id: PBO:0081338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 137, pseudogene","termid":"PBO:0081338"}


id: MONDO:0008096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nevus flammeus of nape of neck","secondary_identifiers":["UMLS:C2697447","OMIM:163100","MESH:C567524","MEDGEN:437278"],"synonyms":[{"name":"Unna Nevus","type":"related"},{"name":"erythema nuchae","type":"related"},{"name":"nevus flammeus of nape of neck","type":"exact"}],"termid":"MONDO:0008096","xrefs":{"Monarch":{"xref_id":"0008096"}}}


id: MONDO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete homocarnosinosis (obsolete MONDO:0000699)","termid":"MONDO:0000699","xrefs":{"Monarch":{"xref_id":"0000699"}}}


id: PBO:0067087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 123, pseudogene","termid":"PBO:0067087"}


id: GO:1901326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetracycline stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tetracycline","termid":"GO:1901326"}


id: GO:1903705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of siRNA processing.","definition_xrefs":["PMID:19701182","GO_REF:0000058","GOC:BHF","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of siRNA processing","termid":"GO:0070921"},{"relation_name":"positively_regulates","term_name":"siRNA processing","termid":"GO:0030422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of siRNA processing","synonyms":[{"name":"activation of RNA interference, production of guide RNAs","type":"narrow"},{"name":"activation of RNA interference, production of siRNA","type":"narrow"},{"name":"activation of production of guide RNAs involved in RNA interference","type":"narrow"},{"name":"activation of production of siRNA involved in RNA interference","type":"narrow"},{"name":"positive regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"positive regulation of RNA interference, production of siRNA","type":"exact"},{"name":"positive regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"positive regulation of production of siRNA involved in PTGS","type":"exact"},{"name":"positive regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"positive regulation of production of siRNA involved in post-transcriptional gene silencing by RNA","type":"related"},{"name":"positive regulation of siRNA production","type":"related"},{"name":"up regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"up regulation of RNA interference, production of siRNA","type":"exact"},{"name":"up regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"up regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"up-regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"up-regulation of RNA interference, production of siRNA","type":"exact"},{"name":"up-regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"up-regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"upregulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"upregulation of RNA interference, production of siRNA","type":"exact"},{"name":"upregulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"upregulation of production of siRNA involved in RNA interference","type":"exact"}],"termid":"GO:1903705"}


id: PBO:0042466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 3","termid":"PBO:0042466"}


id: SO:0100014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The amino-terminal positively-charged region of a signal peptide (approx 1-5 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"n_terminal_region","synonyms":[{"name":"N-region","type":"related"}],"termid":"SO:0100014"}


id: PATO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000267 relative visual_acuity (obsolete PATO:0000267)","termid":"PATO:0000267"}


id: PBO:0059799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 25","termid":"PBO:0059799"}


id: GO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of mucus by the mucosa. Mucus is a viscous slimy secretion consisting of mucins and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes. The mucosa, or mucous membrane, is the membrane covered with epithelium that lines the tubular organs of the body. Mucins are carbohydrate-rich glycoproteins that have a lubricating and protective function.","definition_xrefs":["GOC:add","ISBN:068340007X","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mucus secretion","synonyms":[{"name":"mucus production","type":"exact"}],"termid":"GO:0070254"}


id: PBO:0066182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 6","termid":"PBO:0066182"}


id: PBO:0044957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 4","termid":"PBO:0044957"}


id: GO:1902430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amyloid-beta formation.","definition_xrefs":["GOC:TermGenie","PMID:22992957","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"regulation of amyloid-beta formation","termid":"GO:1902003"},{"relation_name":"is_a","term_name":"negative regulation of amyloid precursor protein catabolic process","termid":"GO:1902992"},{"relation_name":"negatively_regulates","term_name":"amyloid-beta formation","termid":"GO:0034205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid-beta formation","synonyms":[{"name":"down regulation of beta-amyloid formation","type":"exact"},{"name":"down-regulation of beta-amyloid formation","type":"exact"},{"name":"downregulation of beta-amyloid formation","type":"exact"},{"name":"inhibition of beta-amyloid formation","type":"narrow"},{"name":"negative regulation of beta-amyloid formation","type":"exact"}],"termid":"GO:1902430"}


id: GO:0033876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + glycochenodeoxycholate = adenosine 3',5'-diphosphate + glycochenodeoxycholate 7-sulfate + H+.","definition_xrefs":["EC:2.8.2.34","RHEA:17689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycochenodeoxycholate sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R07289","MetaCyc:2.8.2.34-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:glycochenodeoxycholate 7-sulfotransferase activity","type":"related"},{"name":"BAST","type":"related"},{"name":"bile acid:3'-phosphoadenosine-5'-phosphosulfate sulfotransferase activity","type":"broad"},{"name":"bile acid:PAPS:sulfotransferase activity","type":"related"}],"termid":"GO:0033876"}


id: PBO:0057296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513a-1","termid":"PBO:0057296"}


id: PBO:0058589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6722","termid":"PBO:0058589"}


id: GO:0036353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of a single ubiquitin group to lysine-119 (H2A- K119) in metazoans, and at the equivalent residue in other organisms.","definition_xrefs":["PMID:15386022","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K119 monoubiquitination (obsolete GO:0036353)","synonyms":[{"name":"histone H2A monoubiquitination (H2A-K119)","type":"exact"}],"termid":"GO:0036353"}


id: MONDO:0010936
data:
  {"annotated_genes":["SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85079],"is_not":false,"summary":null,"term":"MONDO:0010936"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the CHMP2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"behavioral variant of frontotemporal dementia","termid":"MONDO:0017160"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04489":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1833296","OMIM:600795","GARD:15322","DOID:0111227","ICD9:331.19","DOID:0060208","MESH:C579991","OMIM:614696","SCTID:702393003","MEDGEN:318833","MESH:C563708"],"synonyms":[{"name":"CHMP2B amyotrophic lateral sclerosis","type":"exact"},{"name":"CHMP2B-related amyotrophic lateral sclerosis","type":"exact"},{"name":"Dmt1","type":"related"},{"name":"FTD3","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in CHMP2B","type":"exact"},{"name":"amyotrophic lateral sclerosis, Chmp2B-related","type":"exact"},{"name":"dementia, familial nonspecific","type":"related"},{"name":"frontotemporal dementia, chromosome 3-linked","type":"exact"}],"termid":"MONDO:0010936","terms_by_termid":{"MONDO:0010936":null},"xrefs":{"Monarch":{"xref_id":"0010936"}}}


id: PBO:0059182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin","termid":"PBO:0059182"}


id: GO:1990645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of phosphorylases by removal of phosphate groups.","definition_xrefs":["PMID:8602837"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylase dephosphorylation (obsolete GO:1990645)","synonyms":[{"name":"phosphorylase dephosphorylation","type":"exact"}],"termid":"GO:1990645"}


id: PBO:0067135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 183, pseudogene","termid":"PBO:0067135"}


id: PBO:0041881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATR tumorigenicity conversion 1","termid":"PBO:0041881"}


id: GO:0014843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.","definition_xrefs":["GOC:mtg_muscle","PMID:16607119","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth factor dependent regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014843"}


id: GO:0072118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the pronephros. This process pertains to the physical shaping of a rudimentary structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros structural organization","synonyms":[{"name":"pronephric kidney structural organization","type":"exact"},{"name":"pronephros structural organisation","type":"exact"}],"termid":"GO:0072118"}


id: MONDO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infection caused by the hepatitis C virus.","definition_xrefs":["NCIT:C3098"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatitis C virus infection","secondary_identifiers":["ICD9:070.41","EFO:0003047","ICD9:070.54","MEDGEN:42425","ICD9:070.7","MESH:D006526","UMLS:C0019196","SCTID:128302006","DOID:1883"],"synonyms":[{"name":"Hepatitis C virus caused hepatitis","type":"exact"},{"name":"Hepatitis C virus hepatitis","type":"exact"},{"name":"NANBH","type":"exact"},{"name":"chronic hepatitis C","type":"narrow"},{"name":"hepatitis C infection","type":"exact"},{"name":"hepatitis Nona nonB","type":"exact"},{"name":"hepatitis type C","type":"exact"},{"name":"non-A, non-B Hepatitis","type":"exact"},{"name":"viral hepatitis C","type":"exact"}],"termid":"MONDO:0005231","xrefs":{"Monarch":{"xref_id":"0005231"}}}


id: PBO:0046019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 4","termid":"PBO:0046019"}


id: MONDO:0022535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carotid artery disorder","termid":"MONDO:0005269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autonomic facial cephalgia","secondary_identifiers":["UMLS:C0238902","ICD9:337.09","MEDGEN:536866","SCTID:230482003"],"synonyms":[{"name":"Autonomic facial cephalgia","type":"related"},{"name":"Carotidynia","type":"related"},{"name":"Carotodynia","type":"related"},{"name":"carotidynia","type":"exact"}],"termid":"MONDO:0022535","xrefs":{"Monarch":{"xref_id":"0022535"}}}


id: GO:0005297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + H+(out) = proline(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"proline:proton symporter activity","synonyms":[{"name":"hydrogen/proline transporter","type":"broad"}],"termid":"GO:0005297"}


id: PBO:0082814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved ER protein translocation channel; essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p); forms channel for SRP-dependent protein import; with Sec63 complex is required for SRP-independent protein translocation into the ER; involved in posttranslational soluble protein import into the ER, ERAD of soluble substrates, and misfolded soluble protein export from the ER","termid":"PBO:0082814"}


id: GO:0045880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway","secondary_identifiers":["GO:0045878"],"synonyms":[{"name":"activation of smoothened signaling pathway","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway","type":"exact"},{"name":"positive regulation of hh signaling pathway","type":"exact"},{"name":"positive regulation of smoothened by patched","type":"related"},{"name":"positive regulation of smoothened receptor activity by patched","type":"related"},{"name":"positive regulation of smoothened signalling pathway","type":"exact"},{"name":"stimulation of smoothened signaling pathway","type":"narrow"},{"name":"up regulation of smoothened signaling pathway","type":"exact"},{"name":"up-regulation of smoothened signaling pathway","type":"exact"},{"name":"upregulation of smoothened signaling pathway","type":"exact"}],"termid":"GO:0045880"}


id: PBO:0018073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase Cyc3 (predicted)","termid":"PBO:0018073"}


id: PBO:0068147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 454","termid":"PBO:0068147"}


id: GO:1901430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of syringal lignin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of syringal lignin biosynthetic process","termid":"GO:1901428"},{"relation_name":"positively_regulates","term_name":"syringal lignin biosynthetic process","termid":"GO:1901066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of syringal lignin biosynthetic process","synonyms":[{"name":"activation of S-lignin biosynthetic process","type":"exact"},{"name":"activation of syringal lignin anabolism","type":"exact"},{"name":"activation of syringal lignin biosynthesis","type":"exact"},{"name":"activation of syringal lignin biosynthetic process","type":"narrow"},{"name":"activation of syringal lignin formation","type":"exact"},{"name":"activation of syringal lignin synthesis","type":"exact"},{"name":"positive regulation of S-lignin biosynthetic process","type":"exact"},{"name":"positive regulation of syringal lignin anabolism","type":"exact"},{"name":"positive regulation of syringal lignin biosynthesis","type":"exact"},{"name":"positive regulation of syringal lignin formation","type":"exact"},{"name":"positive regulation of syringal lignin synthesis","type":"exact"},{"name":"up regulation of S-lignin biosynthetic process","type":"exact"},{"name":"up regulation of syringal lignin anabolism","type":"exact"},{"name":"up regulation of syringal lignin biosynthesis","type":"exact"},{"name":"up regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"up regulation of syringal lignin formation","type":"exact"},{"name":"up regulation of syringal lignin synthesis","type":"exact"},{"name":"up-regulation of S-lignin biosynthetic process","type":"exact"},{"name":"up-regulation of syringal lignin anabolism","type":"exact"},{"name":"up-regulation of syringal lignin biosynthesis","type":"exact"},{"name":"up-regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"up-regulation of syringal lignin formation","type":"exact"},{"name":"up-regulation of syringal lignin synthesis","type":"exact"},{"name":"upregulation of S-lignin biosynthetic process","type":"exact"},{"name":"upregulation of syringal lignin anabolism","type":"exact"},{"name":"upregulation of syringal lignin biosynthesis","type":"exact"},{"name":"upregulation of syringal lignin biosynthetic process","type":"exact"},{"name":"upregulation of syringal lignin formation","type":"exact"},{"name":"upregulation of syringal lignin synthesis","type":"exact"}],"termid":"GO:1901430"}


id: MONDO:0019582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Self-healing papular mucinosis is a rare form of localized lichen myxedematosus occurring primarily in children and characterized by the development of mucinous papules on various parts of the body (face, neck, trunk, and limbs) that resolve spontaneously within some weeks to months. Systemic symptoms can be observed such as fever, arthralgias and weakness.","definition_xrefs":["Orphanet:90397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"self-healing papular mucinosis","secondary_identifiers":["MEDGEN:590583","GARD:19141","UMLS:C0406657"],"termid":"MONDO:0019582","xrefs":{"Monarch":{"xref_id":"0019582"}}}


id: GO:0046174
data:
  {"annotated_genes":["SJAG_04048","SJAG_00244","SJAG_04870","SJAG_04192","SJAG_04320","SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[78405,71674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[88353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[114853,88460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[72363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"polyol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyhydric alcohol catabolic process","type":"exact"},{"name":"polyol breakdown","type":"exact"},{"name":"polyol catabolism","type":"exact"},{"name":"polyol degradation","type":"exact"}],"termid":"GO:0046174","terms_by_termid":{"GO:0006062":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null}}


id: MONDO:0035008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated splenic vein thrombosis","secondary_identifiers":["Orphanet:583856","MEDGEN:544034","UMLS:C0272416","GARD:22338","icd11.foundation:121618859"],"termid":"MONDO:0035008","xrefs":{"Monarch":{"xref_id":"0035008"}}}


id: GO:0072037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephron. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"}


id: PBO:0029257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029257"}


id: PBO:0082822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved nuclear protein that interacts with GTP-Gsp1p; stimulates nucleotide release from Gsp1p; involved in nuclear protein import; nucleotide release is inhibited by Yrb1p","termid":"PBO:0082822"}


id: PBO:0013805
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HUT1","termid":"PBO:0013805"}


id: GO:0016963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interaction with the alpha-2 macroglobulin receptor and glycoprotein gp330 forming a complex with the alpha-2 macroglobulin receptor light and heavy chains.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-2 macroglobulin receptor-associated protein activity (obsolete GO:0016963)","synonyms":[{"name":"alpha-2 macroglobulin receptor-associated protein activity","type":"exact"}],"termid":"GO:0016963"}


id: PR:Q9UT11
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zrt2 gene.","definition_xrefs":["UniProtKB:Q9UT11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized zinc transporter P8A3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.03","synonyms":[{"name":"Spom972h-zrt2","type":"exact"}],"termid":"PR:Q9UT11"}


id: MONDO:0000826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic X-linked intellectual disability Cabezas type (obsolete MONDO:0000826)","termid":"MONDO:0000826","xrefs":{"Monarch":{"xref_id":"0000826"}}}


id: GO:1902108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of mitochondrial membrane permeability that is involved in apoptotic process.","definition_xrefs":["PMID:19168129","GOC:mtg_apoptosis","GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic mitochondrial changes","termid":"GO:0008637"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0007005","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability involved in apoptotic process","synonyms":[{"name":"regulation of mitochondrial membrane permeability involved in apoptosis","type":"narrow"},{"name":"regulation of mitochondrial membrane permeability involved in apoptotic cell death","type":"exact"},{"name":"regulation of mitochondrial membrane permeability involved in apoptotic program","type":"narrow"},{"name":"regulation of mitochondrial membrane permeability involved in apoptotic programmed cell death","type":"exact"},{"name":"regulation of mitochondrial membrane permeability involved in programmed cell death by apoptosis","type":"exact"},{"name":"regulation of mitochondrial membrane permeability involved in signaling (initiator) caspase activity","type":"related"},{"name":"regulation of mitochondrial membrane permeability involved in type I programmed cell death","type":"narrow"},{"name":"regulation of transport across mitochondrial membrane involved in apoptosis","type":"narrow"},{"name":"regulation of transport across mitochondrial membrane involved in apoptotic cell death","type":"exact"},{"name":"regulation of transport across mitochondrial membrane involved in apoptotic process","type":"exact"},{"name":"regulation of transport across mitochondrial membrane involved in apoptotic program","type":"narrow"},{"name":"regulation of transport across mitochondrial membrane involved in apoptotic programmed cell death","type":"exact"},{"name":"regulation of transport across mitochondrial membrane involved in programmed cell death by apoptosis","type":"exact"},{"name":"regulation of transport across mitochondrial membrane involved in signaling (initiator) caspase activity","type":"related"},{"name":"regulation of transport across mitochondrial membrane involved in type I programmed cell death","type":"narrow"}],"termid":"GO:1902108"}


id: MONDO:0007937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant primary hypomagnesemia with hypocalciuria (ADPHH) is a mild form of familial primary hypomagnesemia (FPH), characterized by extreme weakness, tetany and convulsions. Secondary disturbances in calcium excretion are observed.","definition_xrefs":["Orphanet:34528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with hypocalcuria","termid":"MONDO:0017625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal hypomagnesemia 2","secondary_identifiers":["MEDGEN:320542","SCTID:725393000","UMLS:C1835171","MESH:C537152","OMIM:154020","GARD:3350","DOID:0060885"],"synonyms":[{"name":"FXYD2 familial primary hypomagnesemia","type":"exact"},{"name":"FXYD2 primary hypomagnesemia","type":"exact"},{"name":"HOMG2","type":"exact"},{"name":"autosomal dominant primary hypomagnesemia with hypocalciuria","type":"related"},{"name":"familial primary hypomagnesemia caused by mutation in FXYD2","type":"exact"},{"name":"hypomagnesemia 2, renal","type":"related"},{"name":"isolated autosomal dominant hypomagnesemia","type":"exact"},{"name":"isolated renal magnesium wasting","type":"exact"},{"name":"magnesium loss, isolated renal","type":"related"},{"name":"magnesium wasting, renal","type":"related"},{"name":"primary hypomagnesemia caused by mutation in FXYD2","type":"exact"},{"name":"renal hypomagnesemia type 2","type":"exact"}],"termid":"MONDO:0007937","xrefs":{"Monarch":{"xref_id":"0007937"}}}


id: PBO:0068395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 214","termid":"PBO:0068395"}


id: PBO:0017005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu25","termid":"PBO:0017005"}


id: GO:0044323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a retinoic acid-responsive element, a variable direct repeat of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind.","definition_xrefs":["GOC:yaf","PMID:11327309","PMID:19917671","GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0000976","GO:0005488"],"is_obsolete":false,"name":"retinoic acid-responsive element binding","synonyms":[{"name":"RARE binding","type":"exact"}],"termid":"GO:0044323"}


id: PBO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 5","termid":"PBO:0052491"}


id: PR:O59827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A disulfide-bond oxidoreductase YfcG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05017","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.07c","secondary_identifiers":["UniProtKB:O59827"],"synonyms":[{"name":"GST-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-yfcG","type":"exact"}],"termid":"PR:O59827"}


id: PBO:0109364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 2B","termid":"PBO:0109364"}


id: PBO:0070252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 195 pseudogene","termid":"PBO:0070252"}


id: GO:0050819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of coagulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of coagulation","termid":"GO:0050818"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of coagulation","synonyms":[{"name":"anticoagulant activity","type":"related"},{"name":"down regulation of coagulation","type":"exact"},{"name":"down-regulation of coagulation","type":"exact"},{"name":"downregulation of coagulation","type":"exact"},{"name":"inhibition of coagulation","type":"narrow"},{"name":"negative regulation of clotting","type":"exact"}],"termid":"GO:0050819"}


id: FYPO:0000345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus is abnormal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein export from nucleus during vegetative growth","synonyms":[{"name":"abnormal protein export from nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000345"}


id: MONDO:0014219
data:
  {"annotated_genes":["SJAG_00890"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85551],"is_not":false,"summary":null,"term":"MONDO:0014219"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"alacrima, achalasia, and intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615510","DOID:0112321","GARD:12404","UMLS:C4706563","MEDGEN:1640947"],"synonyms":[{"name":"AAMR","type":"related"},{"name":"GMPPA-CDG","type":"related"},{"name":"alacrima, achalasia, and intellectual disability syndrome","type":"exact"},{"name":"alacrima, achalasia, and mental retardation syndrome","type":"exact"}],"termid":"MONDO:0014219","terms_by_termid":{"MONDO:0014219":null},"xrefs":{"Monarch":{"xref_id":"0014219"}}}


id: PBO:0053371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 294","termid":"PBO:0053371"}


id: MONDO:0006590
data:
  {"annotated_genes":["SJAG_01938","SJAG_00104","SJAG_03158","SJAG_05011","SJAG_04565","SJAG_02698","SJAG_01878","SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[85773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[85486,85487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[84785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[86487,86488,86486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"}]},"cv_name":"mondo","definition":"A group of autosomal dominant, autosomal recessive, X-linked inherited or acquired disorders characterized by the thickening of the palms and soles due to hyperkeratosis.","definition_xrefs":["NCIT:C34748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_04565":null,"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0022596","SCTID:706885006","DOID:3390","ICD9:757.39","EFO:1000745","MEDGEN:44017"],"synonyms":[{"name":"keratoderma, palmoplantar","type":"related"},{"name":"keratosis palmaris et plantaris","type":"exact"},{"name":"palmoplantar keratoderma","type":"exact"}],"termid":"MONDO:0006590","terms_by_termid":{"MONDO:0007858":null,"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0014131":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0006590"}}}


id: PBO:0081182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type and G-patch domain containing","termid":"PBO:0081182"}


id: MONDO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 9","secondary_identifiers":["OMIM:619319","MEDGEN:1779656","UMLS:C5543365"],"synonyms":[{"name":"LMPHM9","type":"exact"},{"name":"lymphatic malformation 9","type":"exact"}],"termid":"MONDO:0030270","xrefs":{"Monarch":{"xref_id":"0030270"}}}


id: GO:0052681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,R)-alpha-bisabolene + diphosphate.","definition_xrefs":["RHEA:25436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-bisabolene synthase activity","secondary_identifiers":["MetaCyc:RXN-8550","KEGG_REACTION:R08370","EC:4.2.3.38"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(E)-alpha-bisabolene-forming] activity","type":"exact"},{"name":"bisabolene synthase activity","type":"broad"}],"termid":"GO:0052681"}


id: PBO:0063219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 8 pseudogene 1","termid":"PBO:0063219"}


id: GO:0140384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphological, biochemical and genetic changes that induce the differentiation of non-pathogenic parasites into pathogenic metacyclic parasites in the Trypanosomatidae species. The pathogenic parasites are known as metacyclic trypomastigotes in Trypanosoma and metacyclic promastigotes in Leishmania.","definition_xrefs":["PMID:2659372","PMID:21514274","PMID:29091711","PMID:29409544","PMID:12152483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metacyclogenesis","termid":"GO:0140384"}


id: MONDO:0012823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 7","secondary_identifiers":["UMLS:C2677120","MEDGEN:394209","OMIM:612232"],"synonyms":[{"name":"CRCS7","type":"exact"},{"name":"colorectal cancer, susceptibility to, 7","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 11","type":"related"}],"termid":"MONDO:0012823","xrefs":{"Monarch":{"xref_id":"0012823"}}}


id: GO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an immune cell in response to an external stimulus a part of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration involved in immune response","termid":"GO:0002522"},{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte chemotaxis involved in immune response","synonyms":[{"name":"immune cell chemotaxis during immune response","type":"exact"},{"name":"leucocyte chemotaxis during immune response","type":"exact"}],"termid":"GO:0002233"}


id: PBO:0072971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 1","termid":"PBO:0072971"}


id: PBO:0036135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_acetylation_during_vegetative_growth","termid":"PBO:0036135"}


id: GO:0140090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Preferential binding of proteins on curved membranes. The binding to curved membranes by insertion (aka wedging) to curved membranes is mediated by both the hydrophobic and hydrophilic faces of the helix of membrane curvature sensing (MCS) proteins.","definition_xrefs":["PMID:25898166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"membrane curvature sensor activity","termid":"GO:0140090"}


id: PBO:0049018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6B pseudogene 3","termid":"PBO:0049018"}


id: FYPO:0001037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth during cellular response to salt stress","synonyms":[{"name":"normal cell population growth during cellular response to ionic osmotic stress","type":"exact"},{"name":"normal cell population growth during cellular response to salt stress","type":"exact"},{"name":"normal cellular response to salt stress","type":"related"},{"name":"normal cellular salinity response","type":"related"},{"name":"normal vegetative cell population growth during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001037"}


id: PBO:0004638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron sulfur cluster assembly protein Isd11 (predicted)","termid":"PBO:0004638"}


id: PBO:0027332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_menadione","termid":"PBO:0027332"}


id: PATO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical quality of a process","termid":"PATO:0002062"}


id: GO:0036072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance, that does not require the replacement of preexisting tissues.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"direct ossification","termid":"GO:0036072"}


id: PBO:0049074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 89 pseudogene","termid":"PBO:0049074"}


id: PBO:0071669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 1","termid":"PBO:0071669"}


id: PBO:0049183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine rich extracellular protein 1","termid":"PBO:0049183"}


id: MOD:01384
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an aminomalonic acid.","definition_xrefs":["PubMed:7457858","PubMed:5415959","PubMed:6366787","RESID:AA0458","PubMed:1621954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomalonic acid (Ser)","synonyms":[{"name":"2-carboxyglycine","type":"exact"},{"name":"Ama","type":"exact"},{"name":"MOD_RES Aminomalonic acid (Ser)","type":"exact"},{"name":"aminomalonic acid","type":"exact"},{"name":"aminopropanedioic acid","type":"exact"}],"termid":"MOD:01384"}


id: FYPO:0005717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal protein kinase activity during mitosis","synonyms":[{"name":"normal protein kinase activity during mitotic M phase","type":"related"},{"name":"normal protein kinase activity during mitotic M-phase","type":"related"}],"termid":"FYPO:0005717"}


id: GO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic anion by a volume-sensitive channel. A volume-sensitive channel is a channel that responds to changes in the volume of a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"volume-sensitive anion channel activity","secondary_identifiers":["Reactome:R-HSA-8941543"],"synonyms":[{"name":"volume-regulated channel","type":"broad"}],"termid":"GO:0005225"}


id: GO:0097241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hematopoietic stem cell into the bone marrow, and its subsequent positioning within defined functional compartments in that microenvironment. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.","definition_xrefs":["GOC:yaf","PMID:17368745","CL:0000037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell migration to bone marrow","synonyms":[{"name":"hematopoietic stem cell homing","type":"broad"},{"name":"hemopoietic stem cell migration to bone marrow","type":"exact"},{"name":"progenitor cell homing","type":"broad"}],"termid":"GO:0097241"}


id: MONDO:0003139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesangial proliferative glomerulonephritis (MPGN) is a condition that affects the kidneys. Many experts consider it a variant of minimal change disease, but some experts believe it is a separate condition. It may present with nephrotic syndrome, which is a group of symptoms that include protein in the urine (proteinuria), low blood protein levels, high cholesterol levels, high triglyceride levels, and swelling. It can also present with blood in the urine (hematuria). MPGN is characterized by an increased number of mesangial cells in the glomeruli in the kidneys and damage to the glomeruli. Glomeruli are the structures that help filter wastes and fluids. MPGN may occur in several renal diseases such as IgA nephropathy (commonly), IgM nephropathy, lupus nephritis, and C1q nephropathy.However, in some cases, the underlying cause of MPGN remains unclear. Treatment may depend on the cause (if known) and may include steroids, mycophenolate mofetil, and/or cyclophosphamide, and other therapies to treat specific symptoms. Most people with MPGN have a good prognosis, but some may develop chronic kidney disease, which can progress to end stage renal failure.","direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"mesangial proliferative glomerulonephritis","secondary_identifiers":["UMLS:C0221238","SCTID:35546006","DOID:4783","GARD:9580","NANDO:1201029","MEDGEN:66364","NANDO:2200122","NCIT:C35445"],"synonyms":[{"name":"Mesangioproliferative glomerulonephritis","type":"related"},{"name":"glomerulonephritis - mesangial proliferative","type":"related"},{"name":"mesangial proliferative GN","type":"related"}],"termid":"MONDO:0003139","xrefs":{"Monarch":{"xref_id":"0003139"}}}


id: PR:Q9C0Y5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette transporter pdr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.09c","synonyms":[{"name":"ABC transporter pdr1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pdr1","type":"exact"}],"termid":"PR:Q9C0Y5"}


id: SO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The leftmost segment of homology in the HML and MAT mating loci, but not present in HMR.","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"W_region","secondary_identifiers":["SO:0002000"],"synonyms":[{"name":"W-region","type":"exact"}],"termid":"SO:0002024"}


id: GO:0097295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.","definition_xrefs":["PMID:19567876","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"},{"relation_name":"is_a","term_name":"morphine metabolic process","termid":"GO:0071272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"morphine biosynthetic process","synonyms":[{"name":"morphine anabolism","type":"exact"},{"name":"morphine biosynthesis","type":"exact"},{"name":"morphine formation","type":"exact"},{"name":"morphine synthesis","type":"exact"}],"termid":"GO:0097295"}


id: PATO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000260 visual_acuity (obsolete PATO:0000260)","termid":"PATO:0000260"}


id: PBO:0074674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 59A","termid":"PBO:0074674"}


id: MONDO:0018328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"homozygous familial hypercholesterolemia","secondary_identifiers":["UMLS:C0342881","GARD:10416","MESH:D000090542","NANDO:1200394","MEDGEN:575266","Orphanet:391665","NANDO:2201255","SCTID:238078005"],"synonyms":[{"name":"HoFH","type":"exact"},{"name":"homozygous familial hypercholesterolemia","type":"exact"}],"termid":"MONDO:0018328","xrefs":{"Monarch":{"xref_id":"0018328"}}}


id: PBO:0091946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glutamate dehydrogenase Gdh2","termid":"PBO:0091946"}


id: GO:0018164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-threonine residue by the formation of O-(phospho-5'-DNA)-L-threonine.","definition_xrefs":["RESID:AA0255"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via peptidyl-threonine (obsolete GO:0018164)","synonyms":[{"name":"DNA-protein covalent cross-linking via peptidyl-threonine","type":"exact"}],"termid":"GO:0018164"}


id: PBO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 5, endonuclease","termid":"PBO:0046480"}


id: PBO:0076901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 55","termid":"PBO:0076901"}


id: GO:0071995
data:
  {"annotated_genes":["SJAG_03497","SJAG_01344","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95833,96824,118015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"}]},"cv_name":"biological_process","definition":"The directed movement of phytochelatins into the vacuole. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"phytochelatin transmembrane transport","termid":"GO:0071994"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phytochelatin import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin import into vacuole","type":"related"},{"name":"phytochelatin transport into vacuole","type":"exact"}],"termid":"GO:0071995","terms_by_termid":{"GO:0036246":null}}


id: MONDO:0024560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus arteriosus","termid":"MONDO:0011827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"PDA1","secondary_identifiers":["MEDGEN:924232","OMIM:607411","UMLS:C4282128","GARD:7342"],"synonyms":[{"name":"PDA","type":"related"},{"name":"PDA1","type":"exact"},{"name":"patent ductus arteriosus 1","type":"related"},{"name":"patent ductus arteriosus, susceptibility to","type":"exact"}],"termid":"MONDO:0024560","xrefs":{"Monarch":{"xref_id":"0024560"}}}


id: GO:1902965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to early endosome.","definition_xrefs":["GO_REF:0000058","GOC:sjp","PMID:22621900","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to endosome","termid":"GO:1905666"},{"relation_name":"regulates","term_name":"protein localization to early endosome","termid":"GO:1902946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to early endosome","synonyms":[{"name":"regulation of protein localisation in early endosome","type":"exact"},{"name":"regulation of protein localisation to early endosome","type":"exact"},{"name":"regulation of protein localization in early endosome","type":"exact"}],"termid":"GO:1902965"}


id: GO:1905824
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116486],"is_not":false,"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid arm separation.","definition_xrefs":["GOC:TermGenie","PMID:18765790","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid separation","termid":"GO:1901970"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid arm separation","termid":"GO:1905822"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid arm separation","termid":"GO:1990891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic sister chromatid arm separation","type":"narrow"},{"name":"up regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"up-regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"upregulation of mitotic sister chromatid arm separation","type":"exact"}],"termid":"GO:1905824","terms_by_termid":{"GO:1905824":null}}


id: PBO:0068421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding region (RNP1, RRM) containing 3 pseudogene 1","termid":"PBO:0068421"}


id: MONDO:0020443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Absence of innominate vein is a rare congenital anomaly of the great veins characterized by absence of the left brachiocephalic vein (or innominate vein), resulting in an anomalous venous vasculature. Patients are usually asymptomatic and the anomaly is typically discovered intraoperatively. An association with persistence of left superior vena cava, permanent levoatrial cardinal vein or anomaly of the inferior vena cava has been reported in some cases.","definition_xrefs":["Orphanet:99112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absence of innominate vein","secondary_identifiers":["UMLS:C4707656","MEDGEN:1640707","GARD:19655"],"synonyms":[{"name":"absence of brachiocephalic vein","type":"exact"}],"termid":"MONDO:0020443","xrefs":{"Monarch":{"xref_id":"0020443"}}}


id: PBO:0063272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 18 pseudogene","termid":"PBO:0063272"}


id: MONDO:0005853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm composed of a carcinomatous epithelial component and a sarcomatous mesenchymal component. Representative examples include malignant mixed mesodermal (Mullerian) tumor of the female reproductive system and carcinosarcoma of the salivary gland and the lung.","definition_xrefs":["NCIT:C3729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mixed neoplasm","secondary_identifiers":["MESH:D018198","UMLS:C0206625","EFO:1000356","MEDGEN:64618","DOID:154","ICDO:8940/3"],"synonyms":[{"name":"malignant mixed cancer","type":"exact"},{"name":"malignant mixed neoplasm","type":"exact"},{"name":"malignant mixed tumor","type":"exact"},{"name":"malignant mixed tumors","type":"related"},{"name":"malignant mixed tumour","type":"exact"},{"name":"malignant mixed tumours","type":"related"},{"name":"mixed cell type cancer","type":"broad"},{"name":"mixed neoplasm","type":"broad"},{"name":"mixed neoplasm, malignant","type":"exact"},{"name":"mixed tumor","type":"broad"},{"name":"mixed tumor, malignant","type":"exact"},{"name":"mixed tumor, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed tumor, malignant, NOS (morphologic abnormality)","type":"exact"},{"name":"mixed tumors, malignant","type":"related"},{"name":"mixed tumour","type":"broad"},{"name":"tumor, malignant mixed","type":"related"},{"name":"tumor, mixed, malignant","type":"exact"},{"name":"tumors, malignant mixed","type":"related"}],"termid":"MONDO:0005853","xrefs":{"Monarch":{"xref_id":"0005853"}}}


id: PBO:0053124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand dependent nuclear receptor corepressor","termid":"PBO:0053124"}


id: PBO:0064822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3D","termid":"PBO:0064822"}


id: GO:0003388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron over time, that contributes to the development of the amphid sensory organ.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"neuron differentiation involved in amphid sensory organ development","termid":"GO:0003387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron development involved in amphid sensory organ development","termid":"GO:0003388"}


id: PBO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase NADPH flavoprotein subunit (predicted)","termid":"PBO:0005531"}


id: MONDO:1012258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysplasia, non-human animal","termid":"MONDO:1011953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, domestic cat","secondary_identifiers":["OMIA:000937-9685"],"termid":"MONDO:1012258","xrefs":{"Monarch":{"xref_id":"1012258"}}}


id: GO:0031228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi membrane (obsolete GO:0031228)","synonyms":[{"name":"intrinsic to Golgi membrane","type":"narrow"}],"termid":"GO:0031228"}


id: PBO:0038563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding transcription modulator","termid":"PBO:0038563"}


id: GO:0042762
data:
  {"annotated_genes":["SJAG_01187","SJAG_03538","SJAG_01402","SJAG_02406","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111170,115287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[113487,88784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[74830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving sulfur, the nonmetallic element sulfur or compounds that contain sulfur.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01402":null,"SJAG_02380":null,"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of sulfur metabolism","type":"exact"},{"name":"regulation of sulphur metabolic process","type":"exact"},{"name":"regulation of sulphur metabolism","type":"exact"}],"termid":"GO:0042762","terms_by_termid":{"GO:0010510":null,"GO:0090180":null,"GO:2001211":null}}


id: PBO:0083655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceII; encoded by a mobile group I intron within the mitochondrial COX1 gene; intron is normally spliced by the BI4p maturase but AI4p can mutate to acquire the same maturase activity","termid":"PBO:0083655"}


id: MONDO:0019960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"VIPoma is an extremely rare type of pancreatic neuroendocrine tumor that secretes vasoactive intestinal polypeptide (VIP) leading to the manifestations of watery diarrhea, hypokalemia and achlorhydia or hypochhlorhydia (known as WDHA syndrome).","definition_xrefs":["Orphanet:97282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"VIPoma","secondary_identifiers":["MEDGEN:41532","ICDO:8155/1","MESH:D003969","NANDO:2200394","DOID:5574","SCTID:253005002","MedDRA:10047430","GARD:3787","NCIT:C26749","UMLS:C0011993","icd11.foundation:20634476","ICD9:239.7"],"synonyms":[{"name":"Diarrheogenic islet cell tumor","type":"exact"},{"name":"Diarrheogenic islet cell tumour","type":"exact"},{"name":"VIP producing neoplasm","type":"exact"},{"name":"VIP- secreting neoplasm","type":"exact"},{"name":"VIP- secreting tumor","type":"exact"},{"name":"VIP- secreting tumour","type":"exact"},{"name":"VIP-producing NET","type":"exact"},{"name":"VIP-producing neuroendocrine tumor","type":"exact"},{"name":"VIP-producing neuroendocrine tumour","type":"exact"},{"name":"VIP-secreting tumor","type":"exact"},{"name":"VIP-secreting tumour","type":"exact"},{"name":"VIPoma","type":"exact"},{"name":"VIPoma, malignant","type":"exact"},{"name":"Verner-Morrison syndrome","type":"exact"},{"name":"WDHA syndrome","type":"related"},{"name":"malignant vasoactive intestinal peptide-secreting tumor","type":"exact"},{"name":"malignant vasoactive intestinal peptide-secreting tumour","type":"exact"},{"name":"pancreatic cholera","type":"related"},{"name":"pancreatic vipoma","type":"related"},{"name":"vasoactive intestinal peptide (VIP) tumor","type":"related"},{"name":"vasoactive intestinal peptide (VIP) tumour","type":"related"},{"name":"vasoactive intestinal peptide producing neoplasm","type":"exact"},{"name":"vasoactive intestinal peptide producing tumor","type":"exact"},{"name":"vasoactive intestinal peptide producing tumour","type":"exact"},{"name":"vasoactive intestinal peptide secreting neoplasm","type":"exact"},{"name":"vasoactive intestinal peptide-producing tumor","type":"related"},{"name":"vasoactive intestinal peptide-producing tumour","type":"related"},{"name":"vasoactive intestinal peptide-secreting tumor","type":"exact"},{"name":"vasoactive intestinal peptide-secreting tumour","type":"exact"},{"name":"watery diarrhea, hypokalemia, and achlorhydria syndrome","type":"related"},{"name":"watery diarrhea-hypokalemia-achlorhydria syndrome","type":"related"}],"termid":"MONDO:0019960","xrefs":{"Monarch":{"xref_id":"0019960"}}}


id: GO:0033836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol = UDP + a flavonol 7-O-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"flavonol 7-O-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.237-RXN","RHEA:23164"],"synonyms":[{"name":"UDP-glucose:flavonol 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:flavonol 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0033836"}


id: PBO:0002854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Rrn5","termid":"PBO:0002854"}


id: RO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which the partners are related via a feeding relationship.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophically_interacts_with","termid":"RO:0002438"}


id: PBO:0056617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDS1 and EVI1 complex locus","termid":"PBO:0056617"}


id: GO:0030971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor that possesses protein tyrosine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"protein tyrosine kinase binding","termid":"GO:1990782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"receptor tyrosine kinase binding","synonyms":[{"name":"transmembrane receptor protein tyrosine kinase ligand binding","type":"related"}],"termid":"GO:0030971"}


id: GO:0031802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 5 metabotropic glutamate receptor binding","synonyms":[{"name":"type 5 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031802"}


id: PBO:0050722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 8","termid":"PBO:0050722"}


id: PBO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 3","termid":"PBO:0070446"}


id: PBO:0043806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic mesoderm regulator","termid":"PBO:0043806"}


id: MONDO:0009414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen synthetase deficiency, or glycogen storage disease (GSD) type 0, is a genetically inherited anomaly of glycogen metabolism and a form of GSD characterized by fasting hypoglycemia. This is not a glycogenosis, strictly speaking, as the enzyme deficiency decreases glycogen reserves.","definition_xrefs":["Orphanet:2089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disorder due to hepatic glycogen synthase deficiency","secondary_identifiers":["UMLS:C1855861","MESH:C565485","MEDGEN:343430","NANDO:1200838","NANDO:2201151","NANDO:1200824","SCTID:237964009","GARD:2513","NANDO:2200537","OMIM:240600"],"synonyms":[{"name":"GSD 0A","type":"related"},{"name":"GSD due to hepatic glycogen synthase deficiency","type":"exact"},{"name":"GSD type 0a","type":"exact"},{"name":"GSD0A","type":"related"},{"name":"glycogen storage disease 0, liver","type":"related"},{"name":"glycogen storage disease due to glycogen synthase deficiency of liver","type":"exact"},{"name":"glycogen storage disease due to hepatic glycogen synthase deficiency","type":"exact"},{"name":"glycogen storage disease due to liver glycogen synthase deficiency","type":"exact"},{"name":"glycogen storage disease type 0","type":"related"},{"name":"glycogen storage disease type 0, liver","type":"related"},{"name":"glycogen storage disease type 0a","type":"exact"},{"name":"glycogen synthase deficiency","type":"exact"},{"name":"glycogenosis type 0a","type":"exact"},{"name":"hepatic glycogen synthase deficiency","type":"related"},{"name":"hypoglycemia with deficiency of glycogen synthetase in the liver","type":"related"},{"name":"liver GSD 0","type":"related"},{"name":"liver glycogen storage disease 0","type":"related"},{"name":"liver glycogen storage disease due to glycogen synthase deficiency","type":"exact"},{"name":"liver glycogen synthase deficiency","type":"related"}],"termid":"MONDO:0009414","xrefs":{"Monarch":{"xref_id":"0009414"}}}


id: GO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA in a mitochondrion, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl-tRNA aminoacylation","termid":"GO:0006423"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0006520","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"mitochondrial cysteinyl-tRNA aminoacylation","termid":"GO:0070147"}


id: GO:0047497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion along a microtubule, mediated by motor proteins.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitochondrion localization, microtubule-mediated","termid":"GO:0034643"},{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mitochondrion transport along microtubule","synonyms":[{"name":"mitochondrial migration along microtubule","type":"exact"},{"name":"mitochondrial transport along microtubule","type":"exact"}],"termid":"GO:0047497"}


id: GO:0055072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of iron ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete iron ion homeostasis (obsolete GO:0055072)","synonyms":[{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0055072"}


id: GO:0030799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclic nucleotide metabolic process (obsolete GO:0030799)","synonyms":[{"name":"regulation of cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0030799"}


id: PBO:0087972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trifunctional enzyme of thiamine biosynthesis, degradation and salvage; has hydroxymethylpyrimidine (HMP) kinase, HMP-phosphate (HMP-P) kinase and thiaminase activities; member of a gene family with THI21 and THI22; HMP and HMP-P kinase activity redundant with Thi21p","termid":"PBO:0087972"}


id: PBO:0057573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 769","termid":"PBO:0057573"}


id: FYPO:0007597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which CLRC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:23613586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"abolished CLRC complex binding","synonyms":[{"name":"CLRC binding complex abolished","type":"exact"},{"name":"abolished CLRC ubiquitin ligase complex binding","type":"exact"}],"termid":"FYPO:0007597"}


id: FYPO:0006805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}


id: PBO:0066562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 1","termid":"PBO:0066562"}


id: PBO:0068436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 6, pseudogene","termid":"PBO:0068436"}


id: GO:0043648
data:
  {"annotated_genes":["SJAG_04145","SJAG_02176","SJAG_00714","SJAG_04156","SJAG_00359","SJAG_03434","SJAG_01198","SJAG_02225","SJAG_00695","SJAG_00529","SJAG_02276","SJAG_04054","SJAG_01903","SJAG_03457","SJAG_03306","SJAG_03275","SJAG_04843","SJAG_02235","SJAG_01592","SJAG_00937","SJAG_00493","SJAG_00106","SJAG_00815","SJAG_03224","SJAG_00495","SJAG_02408","SJAG_00203","SJAG_01126","SJAG_01753","SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108146,112210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[94032,117547,71751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[78043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[111609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[111610,77350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[70554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[67993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[70710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046452"},{"annotations":[56915,68600,60426,105882,108147,112211,104581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[70712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[78954,89920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006106"},{"annotations":[91464,79433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[90637,104544,92695,87588,102412,111612,111703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006536"},{"annotations":[111031,117548,59380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[61645,78955,72967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006108"},{"annotations":[72110,106577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006107"},{"annotations":[77758,69879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing two carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00203":null,"SJAG_00359":null,"SJAG_00493":null,"SJAG_00495":null,"SJAG_00529":null,"SJAG_00695":null,"SJAG_00714":null,"SJAG_00815":null,"SJAG_00937":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01592":null,"SJAG_01753":null,"SJAG_01903":null,"SJAG_02176":null,"SJAG_02225":null,"SJAG_02235":null,"SJAG_02276":null,"SJAG_02408":null,"SJAG_03224":null,"SJAG_03266":null,"SJAG_03275":null,"SJAG_03306":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_04054":null,"SJAG_04145":null,"SJAG_04156":null,"SJAG_04843":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dicarboxylic acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"dicarboxylate metabolic process","type":"exact"},{"name":"dicarboxylate metabolism","type":"exact"},{"name":"dicarboxylic acid metabolism","type":"exact"}],"termid":"GO:0043648","terms_by_termid":{"GO:0006106":null,"GO:0006107":null,"GO:0006108":null,"GO:0006532":null,"GO:0006533":null,"GO:0006536":null,"GO:0006538":null,"GO:0006761":null,"GO:0009257":null,"GO:0010133":null,"GO:0019266":null,"GO:0019544":null,"GO:0019676":null,"GO:0046452":null,"GO:0046655":null,"GO:0046656":null,"GO:0097054":null}}


id: GO:0061312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart development (obsolete GO:0061312)","synonyms":[{"name":"BMP signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061312"}


id: GO:0089710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a endocytic signal sequence, a specific peptide sequence, of 4-6 amino acids with an essential tyrosine (Y), found on cytoplasmic tails of some cell surface membrane proteins, which directs internalization by clathrin-coated pits.","definition_xrefs":["PMID:8918456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"endocytic targeting sequence binding","termid":"GO:0089710"}


id: GO:0080089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a sinapoyl group to a nitrogen atom on a sinapoyl spermidine molecule resulting in the formation of a disinapoyl spermidine derivative.","definition_xrefs":["PMID:19168716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity","termid":"GO:0080089"}


id: PBO:0039168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 1","termid":"PBO:0039168"}


id: GO:0044737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of an acid-sensing ion channel (ASIC) in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of ion channel activity in another organism","termid":"GO:0044561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of acid-sensing ion channel in another organism","synonyms":[{"name":"modulation of acid-sensing ion channel in other organism","type":"exact"},{"name":"regulation of ASIC channel in other organism","type":"exact"},{"name":"regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044737"}


id: PBO:0063439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6B","termid":"PBO:0063439"}


id: PBO:0079178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 7, pseudogene","termid":"PBO:0079178"}


id: PBO:0072544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 74","termid":"PBO:0072544"}


id: MONDO:0007669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal cysts and diabetes syndrome (RCAD) is a rare form of maturity-onset diabetes of the young (MODY) characterized clinically by heterogeneous cystic renal disease and early-onset familial non-autoimmune diabetes. Pancreatic atrophy, liver dysfunction and genital tract anomalies are also features of the syndrome.","definition_xrefs":["Orphanet:93111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0019254","MONDO:0037792","MONDO:0005015"],"is_obsolete":false,"name":"renal cysts and diabetes syndrome","secondary_identifiers":["DOID:0111101","MEDGEN:96569","MESH:C535520","NANDO:2201073","NCIT:C123018","DECIPHER:47","GARD:10221","SCTID:446641003","OMIM:137920","UMLS:C0431693"],"synonyms":[{"name":"CAKUT with diabetes","type":"exact"},{"name":"FJHN atypical","type":"related"},{"name":"FJHN, atypical","type":"related"},{"name":"HNF1B-MODY","type":"exact"},{"name":"HNF1B-related renal cysts and diabetes syndrome","type":"exact"},{"name":"MODY type 5","type":"related"},{"name":"MODY5","type":"exact"},{"name":"RCAD","type":"exact"},{"name":"RCAD syndrome","type":"exact"},{"name":"atypical FJHN","type":"exact"},{"name":"atypical familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"congenital anomalies of the kidney and urinary tract with diabetes","type":"exact"},{"name":"familial hypoplastic glomerulocystic kidney","type":"exact"},{"name":"glomerulocystic kidney disease, hypoplastic type","type":"related"},{"name":"glomerulocystic kidney, familial hypoplastic","type":"related"},{"name":"hepatocyte nuclear Factor 1-beta-associated monogenic diabetes","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, atypical","type":"related"},{"name":"hypoplastic type glomerulocystic kidney disease","type":"exact"},{"name":"maturity onset diabetes of the Young, type 5","type":"exact"},{"name":"maturity-onset diabetes of the Young, type 5","type":"related"},{"name":"maturity-onset diabetes of the young type 5","type":"related"},{"name":"renal cysts and diabetes syndrome","type":"exact"},{"name":"renal cysts-maturity-onset diabetes of the young syndrome","type":"exact"},{"name":"renal dysfunction-early-onset diabetes syndrome","type":"exact"}],"termid":"MONDO:0007669","xrefs":{"Monarch":{"xref_id":"0007669"}}}


id: PBO:0091378
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds with high affinity to mammalian-type 5'-TTAGGG-3' telomeric repeats, and with very low affinity to less stringently conserved S. pombe telomeric repeats","termid":"PBO:0091378"}


id: MONDO:0003084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuropathy resulting from uremia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"},{"relation_name":"is_a","term_name":"uremia","termid":"MONDO:0007008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005244"],"is_obsolete":false,"name":"uremic neuropathy","secondary_identifiers":["UMLS:C0268708","DOID:4675","MEDGEN:75707","NCIT:C27055","ICD9:357.4","SCTID:11659006"],"termid":"MONDO:0003084","xrefs":{"Monarch":{"xref_id":"0003084"}}}


