# terms

id: MONDO:0030524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis, type 10","secondary_identifiers":["UMLS:C5562064","OMIM:619698","MEDGEN:1794274","Orphanet:662216"],"synonyms":[{"name":"MPS10","type":"exact"}],"termid":"MONDO:0030524","xrefs":{"Monarch":{"xref_id":"0030524"}}}


id: PBO:0086264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates ubiquitination of Rsp5p; has a WW domain consensus motif of PPPSY (residues 131-135) that mediates binding of Rsp5p to Ubp2p; contains an UBA domain; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086264"}


id: PBO:0047538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 4","termid":"PBO:0047538"}


id: GO:0046844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the micropyle, a single cone-shaped specialization of the chorion that allows sperm entry into the egg prior to fertilization.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"chorion micropyle formation","termid":"GO:0046844"}


id: GO:0072729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Gentian violet stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to Gentian violet","termid":"GO:0072728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Gentian violet","synonyms":[{"name":"cellular response to crystal violet","type":"exact"},{"name":"cellular response to {4-[Bis-(4-dimethylamino-phenyl)-methylene]-cyclohexa-2,5-dienylidene}-dimethyl-ammonium chloride","type":"exact"}],"termid":"GO:0072729"}


id: PBO:0076672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell activation inhibitor, mitochondrial","termid":"PBO:0076672"}


id: PR:O60120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16G5.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.06","synonyms":[{"name":"Spom972h-SPBC16G5.06","type":"exact"}],"termid":"PR:O60120"}


id: MONDO:0013028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adenosine monophosphate (AMP) deaminase deficiency is a metabolic disorder for which two forms have been described. Lack of activity of the erythrocyte isoform of AMP deaminase has been described in subjects with low plasma uric acid levels without obvious clinical relevance and will not be described further. Myoadenylate deaminase deficiency is an inherited disorder of muscular energy metabolism with a lack of AMP deaminase activity in skeletal muscle. It is characterized by exercise-induced muscle pain, cramps and/or early fatigue.","definition_xrefs":["Orphanet:45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0019254","MONDO:0004069"],"is_obsolete":false,"name":"adenosine monophosphate deaminase deficiency","secondary_identifiers":["GARD:547","icd11.foundation:550341491","ICD9:277.2","MEDGEN:444140","SCTID:9105005","UMLS:C2931781","MESH:C538234"],"synonyms":[{"name":"AMP deaminase deficiency","type":"exact"},{"name":"myoadenylate deaminase deficiency","type":"exact"}],"termid":"MONDO:0013028","xrefs":{"Monarch":{"xref_id":"0013028"}}}


id: GO:0030337
data:
  {"annotated_genes":["SJAG_01823","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70845,115218],"is_not":false,"summary":null,"term":"GO:0030337"}]},"cv_name":"molecular_function","definition":"An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.","definition_xrefs":["PMID:7903401","GOC:mah","PMID:8087839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01823":null,"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"DNA polymerase processivity factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"processivity clamp","type":"exact"},{"name":"sliding clamp","type":"narrow"}],"termid":"GO:0030337","terms_by_termid":{"GO:0030337":null}}


id: GO:0046839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from a phosphorylated lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phospholipid dephosphorylation","termid":"GO:0046839"}


id: PATO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs earlier than the natural start time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced phase","termid":"PATO:0000500"}


id: PBO:0075455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 6","termid":"PBO:0075455"}


id: GO:0072429
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103945],"is_not":false,"summary":null,"term":"GO:0072429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of intra-S DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to intra-S DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intra-S DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in intra-S DNA damage checkpoint","type":"exact"}],"termid":"GO:0072429","terms_by_termid":{"GO:0072429":null}}


id: PBO:0087225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Second largest subunit of DNA polymerase II (DNA polymerase epsilon); required for maintenance of fidelity of chromosomal replication; essential motif in C-terminus is required for formation of the four-subunit Pol epsilon; expression peaks at the G1/S phase boundary; Cdc28p substrate","termid":"PBO:0087225"}


id: GO:0000340
data:
  {"annotated_genes":["SJAG_01625","SJAG_03223","SJAG_01830","SJAG_04360","SJAG_00507"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65207,73835,74570,79465,99563],"is_not":false,"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"RNA 7-methylguanosine cap binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA m7G cap binding","type":"exact"}],"termid":"GO:0000340","terms_by_termid":{"GO:0000340":null}}


id: PBO:0062220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AP member 1 pseudogene","termid":"PBO:0062220"}


id: GO:0005997
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xylulose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xylulose metabolism","type":"exact"}],"termid":"GO:0005997","terms_by_termid":{"GO:0005998":null}}


id: GO:2000691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myoblast differentiation","termid":"GO:0045662"},{"relation_name":"is_a","term_name":"negative regulation of cardioblast differentiation","termid":"GO:0051892"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"negative regulation of cardiac myoblast differentiation","type":"related"},{"name":"negative regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000691"}


id: MONDO:0008664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant neovascular inflammatory vitreoretinopathy (obsolete MONDO:0008664)","termid":"MONDO:0008664","xrefs":{"Monarch":{"xref_id":"0008664"}}}


id: GO:0120531
data:
  {"annotated_genes":["SJAG_00554","SJAG_01865","SJAG_03352","SJAG_02163","SJAG_04568","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67316,57977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004337"},{"annotations":[119162,119163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097269"},{"annotations":[71645,74150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045547"},{"annotations":[109286,99386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004311"}]},"cv_name":"molecular_function","definition":"Catalysis of chain elongation of prenyl diphosphate substrates via one or more condensation reactions with isopentenyl diphosphate to generate linear polymers with defined chain lengths.","definition_xrefs":["PMID:26216239","PMID:12135472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_00580":null,"SJAG_01865":null,"SJAG_02163":null,"SJAG_03352":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"prenyl diphosphate synthase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:29191091":null},"synonyms":[{"name":"IPPS activity","type":"exact"},{"name":"isoprenyl pyrophosphate synthase activity","type":"exact"}],"termid":"GO:0120531","terms_by_termid":{"GO:0004311":null,"GO:0004337":null,"GO:0006743":null,"GO:0006744":null,"GO:0045547":null,"GO:0097269":null}}


id: GO:1901786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of p-cresol.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:10623531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"p-cresol metabolic process","termid":"GO:1901784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol biosynthetic process","synonyms":[{"name":"p-cresol anabolism","type":"exact"},{"name":"p-cresol biosynthesis","type":"exact"},{"name":"p-cresol formation","type":"exact"},{"name":"p-cresol synthesis","type":"exact"}],"termid":"GO:1901786"}


id: MONDO:0017432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with limb reduction defects (obsolete MONDO:0017432)","secondary_identifiers":["Orphanet:294955"],"termid":"MONDO:0017432","xrefs":{"Monarch":{"xref_id":"0017432"}}}


id: PR:O94664
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug166 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 166 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.06","synonyms":[{"name":"Spom972h-mug166","type":"exact"}],"termid":"PR:O94664"}


id: PBO:0028950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_eisosome","termid":"PBO:0028950"}


id: GO:0031089
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the platelet dense granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"platelet dense granule","termid":"GO:0042827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"platelet dense granule lumen","termid":"GO:0031089"}


id: GO:0072106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the developmental process pertaining to the initial formation of the ureteric bud from the Wolffian duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"regulation of epithelial tube formation","termid":"GO:1905276"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"ureteric bud formation","termid":"GO:0060676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ureteric bud formation","termid":"GO:0072106"}


id: PBO:0083001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-2-hydroxyglutarate dehydrogenase, and minor D-lactate dehydrogenase; mitochondrial matrix protein that oxidizes D-2-hydroxyglutarate (D-2HG), an oncometabolite, to alpha-ketoglutarate with a minor role in lactate catabolism; located in the mitochondrial matrix","termid":"PBO:0083001"}


id: MONDO:0017666
data:
  {"annotated_genes":["SJAG_00104","SJAG_03158","SJAG_04565","SJAG_02488","SJAG_01878","SJAG_02698","SJAG_01938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[85773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[85486,85487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[86488,86486,86487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"}]},"cv_name":"mondo","definition":"Palmoplantar keratoderma that diffusely involves most of the palm and sole and is caused by a genetic abnormality.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_04565":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"diffuse palmoplantar keratoderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1259583500","SCTID:400123002","Orphanet:307141","GARD:21289","ICD9:757.39","UMLS:C0022584","HP:0007435","MEDGEN:7201"],"synonyms":[{"name":"diffuse PPK","type":"exact"},{"name":"diffuse keratosis palmoplantaris","type":"exact"},{"name":"diffuse palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017666","terms_by_termid":{"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0014131":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0017666"}}}


id: PBO:0063529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 11","termid":"PBO:0063529"}


id: MONDO:0023246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Linear porokeratosis is a rare skin condition characterized by streaks of reddish-brown patches surrounded by a ridge-like border.The patches usually develop in infants or young children, but they sometimes develop in adults.","definition_xrefs":["GARD:0009515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis","termid":"MONDO:0006602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"linear porokeratosis","secondary_identifiers":["GARD:9515","MEDGEN:81293","SCTID:238631008","icd11.foundation:1622319802","UMLS:C0302319"],"synonyms":[{"name":"Congenital facial linear porokeratosis (type)","type":"related"},{"name":"Linear Porokeratosis","type":"related"},{"name":"Linear porokeratosis","type":"related"},{"name":"Porokeratosis, Linear","type":"related"},{"name":"Zosteriform porokeratosis","type":"related"}],"termid":"MONDO:0023246","xrefs":{"Monarch":{"xref_id":"0023246"}}}


id: PBO:0054032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1363","termid":"PBO:0054032"}


id: PBO:0087471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a two-component GTPase-activating protein, Bfa1p-Bub2p; contributes to GAP activity, inactivating Tem1 by stimulating GTP hydrolysis following damage or misalignment of the mitotic spindle; functions as a guanine-nucleotide exchange inhibitor (GDI) for Tem1p; involved in multiple cell cycle checkpoint pathways that control mitotic exit; required when telomeres are damaged, but not for all types of chromosomal DNA damage; phosphorylated by the Polo-like kinase Cdc5p","termid":"PBO:0087471"}


id: PBO:0031141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_mitotic_chromosome_segregation","termid":"PBO:0031141"}


id: PBO:0024873
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERO1","termid":"PBO:0024873"}


id: GO:0006557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of S-adenosylmethioninamine, (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt.","definition_xrefs":["GOC:mah","MetaCyc:S-ADENOSYLMETHIONINAMINE"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosylmethioninamine biosynthetic process (obsolete GO:0006557)","synonyms":[{"name":"S-adenosylmethioninamine anabolism","type":"exact"},{"name":"S-adenosylmethioninamine biosynthesis","type":"exact"},{"name":"S-adenosylmethioninamine formation","type":"exact"},{"name":"S-adenosylmethioninamine synthesis","type":"exact"}],"termid":"GO:0006557"}


id: MONDO:0009749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Giant axonal neuropathy (GAN) is a degenerative disorder that is characterized by a progressive motor and sensitive peripheral and central nervous system neuropathy.","definition_xrefs":["Orphanet:643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"giant axonal neuropathy","termid":"MONDO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"giant axonal neuropathy 1","secondary_identifiers":["DOID:0090068","OMIM:256850","UMLS:C1850386","MEDGEN:376775","GARD:6500"],"synonyms":[{"name":"GAN","type":"exact"},{"name":"GAN giant axonal neuropathy","type":"exact"},{"name":"GAN1","type":"related"},{"name":"gan","type":"exact"},{"name":"gan giant axonal neuropathy","type":"exact"},{"name":"giant axonal neuropathy 1","type":"exact"},{"name":"giant axonal neuropathy 1, autosomal recessive","type":"related"},{"name":"giant axonal neuropathy caused by mutation in GAN","type":"exact"},{"name":"giant axonal neuropathy caused by mutation in gan","type":"exact"},{"name":"giant axonal neuropathy type 1","type":"exact"},{"name":"giant axonal neuropathy-1","type":"exact"},{"name":"neuropathy, giant axonal","type":"related"}],"termid":"MONDO:0009749","xrefs":{"Monarch":{"xref_id":"0009749"}}}


id: GO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lipoprotein oxidation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein oxidation","termid":"GO:0034442"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein metabolic process","termid":"GO:0050748"},{"relation_name":"negatively_regulates","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein oxidation","synonyms":[{"name":"inhibition of lipoprotein oxidation","type":"narrow"}],"termid":"GO:0034443"}


id: PBO:0090825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor Sac32","termid":"PBO:0090825"}


id: FYPO:0001699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4,4',4''-(4-propylpyrazole-1,3,5-triyl)trisphenol (PPT). Cells stop growing (and may die) at a concentration of PPT that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to PPT","synonyms":[{"name":"hypersensitive to PPT","type":"exact"},{"name":"sensitive to 4,4',4''-(4-propylpyrazole-1,3,5-triyl)trisphenol","type":"exact"},{"name":"sensitive to PPT during mitotic cell cycle","type":"related"},{"name":"sensitive to PPT during vegetative growth","type":"exact"}],"termid":"FYPO:0001699"}


id: GO:0042820
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100658],"is_not":false,"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:jl","PMID:30671974","PMID:30037155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin B6 catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vitamin B6 breakdown","type":"exact"},{"name":"vitamin B6 catabolism","type":"exact"},{"name":"vitamin B6 degradation","type":"exact"}],"termid":"GO:0042820","terms_by_termid":{"GO:0042820":null}}


id: GO:0071898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of estrogen receptor binding, interacting selectively with a an estrogen receptor.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of estrogen receptor binding (obsolete GO:0071898)","termid":"GO:0071898"}


id: GO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of neutrophil degranulation","termid":"GO:0043313"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of neutrophil degranulation","synonyms":[{"name":"down regulation of neutrophil degranulation","type":"exact"},{"name":"down-regulation of neutrophil degranulation","type":"exact"},{"name":"downregulation of neutrophil degranulation","type":"exact"},{"name":"inhibition of neutrophil degranulation","type":"narrow"},{"name":"negative regulation of neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043314"}


id: MONDO:0002824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardiomyopathy that is not due to abnormalities in heart muscle cells.","definition_xrefs":["Wikipedia:Cardiomyopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"extrinsic cardiomyopathy","secondary_identifiers":["DOID:3978","MEDGEN:739084","UMLS:C1689817","ICD9:425.8","SCTID:195029002"],"synonyms":[{"name":"secondary cardiomyopathy","type":"exact"}],"termid":"MONDO:0002824","xrefs":{"Monarch":{"xref_id":"0002824"}}}


id: GO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proteins transported from mitochondria and targeted to cytoplasmic proteasomes for degradation as a response to oxidative stress conditions.","definition_xrefs":["GOC:mcc","PMID:21070972","PMID:21109188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mitochondria-associated ubiquitin-dependent protein catabolic process","synonyms":[{"name":"MAD","type":"exact"},{"name":"mitochondria-associated protein catabolic process","type":"exact"},{"name":"mitochondria-associated protein degradation","type":"exact"},{"name":"mitochondrion-associated protein catabolic process","type":"exact"}],"termid":"GO:0072671"}


id: GO:0050112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol + NAD+ = 2,4,6/3,5-pentahydroxycyclohexanone + H+ + NADH.","definition_xrefs":["RHEA:16949","EC:1.1.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol 2-dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R01183","MetaCyc:MYO-INOSITOL-2-DEHYDROGENASE-RXN"],"synonyms":[{"name":"inositol 2-dehydrogenase activity","type":"broad"},{"name":"inositol:NAD 2-dehydrogenase activity","type":"exact"},{"name":"myo-inositol 2-dehydrogenase activity","type":"exact"}],"termid":"GO:0050112"}


id: PBO:0038349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kleptoparasite_of","termid":"PBO:0038349"}


id: GO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus.","definition_xrefs":["PMID:9920659","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"is_a","term_name":"associative learning","termid":"GO:0008306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conditioned taste aversion","secondary_identifiers":["Wikipedia:Conditioned_taste_aversion","Wikipedia:Taste_aversion"],"termid":"GO:0001661"}


id: PBO:0077957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 13-1","termid":"PBO:0077957"}


id: PBO:0051903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 10","termid":"PBO:0051903"}


id: MONDO:0003323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0003323 (obsolete MONDO:0003323)","termid":"MONDO:0003323","xrefs":{"Monarch":{"xref_id":"0003323"}}}


id: GO:1904906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bc","GOC:BHF","PMID:19460962","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"},{"relation_name":"positively_regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell-matrix adhesion via fibronectin","synonyms":[{"name":"activation of endothelial cell-matrix adhesion via fibronectin","type":"narrow"},{"name":"up regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"up-regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"upregulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"}],"termid":"GO:1904906"}


id: PBO:0005315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L31 (predicted)","termid":"PBO:0005315"}


id: GO:0097559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the right ventral basal body and exits the cell body proximally and dorsal to the ventral disc.","definition_xrefs":["GOC:giardia","PMID:16607022","PMID:5961344","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right ventral flagellum","synonyms":[{"name":"right ventral cilium","type":"exact"}],"termid":"GO:0097559"}


id: PBO:0091196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys","termid":"PBO:0091196"}


id: PR:O94698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 74 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.15","secondary_identifiers":["UniProtKB:O94698"],"synonyms":[{"name":"Spom972h-WDR74","type":"exact"}],"termid":"PR:O94698"}


id: PBO:0088913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome C1D family subunit Cti1","termid":"PBO:0088913"}


id: GO:1903213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a subtelomeric heterochromatin.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:21300781","SO:0001997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"},{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to subtelomeric heterochromatin","secondary_identifiers":["GO:1990152"],"synonyms":[{"name":"protein localisation in subtelomeric heterochromatin","type":"exact"},{"name":"protein localisation to subtelomeric heterochromatin","type":"exact"},{"name":"protein localisation to telomeric heterochromatin","type":"related"},{"name":"protein localization in subtelomeric heterochromatin","type":"exact"},{"name":"protein localization to telomeric heterochromatin","type":"related"}],"termid":"GO:1903213"}


id: GO:0032071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endodeoxyribonuclease activity","synonyms":[{"name":"endodeoxyribonuclease regulator","type":"related"}],"termid":"GO:0032071"}


id: PBO:0046210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 3","termid":"PBO:0046210"}


id: PBO:0028693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_repeat_element_RNA_level","termid":"PBO:0028693"}


id: MONDO:0957476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tract malformation","termid":"MONDO:0019356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated persistent urogenital sinus","secondary_identifiers":["MEDGEN:1843424","Orphanet:647794","UMLS:C5816754"],"termid":"MONDO:0957476","xrefs":{"Monarch":{"xref_id":"0957476"}}}


id: MONDO:0020119
data:
  {"annotated_genes":["SJAG_00379","SJAG_00992","SJAG_03664","SJAG_03635","SJAG_00466","SJAG_01047","SJAG_04176","SJAG_03286","SJAG_00293","SJAG_05239","SJAG_04631","SJAG_04056","SJAG_01581","SJAG_03900","SJAG_01448","SJAG_01540","SJAG_04235","SJAG_00156","SJAG_02371","SJAG_01465"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010477"},{"annotations":[85636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010561"},{"annotations":[86024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010333"},{"annotations":[86886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010590"},{"annotations":[84837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010407"},{"annotations":[85067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010500"},{"annotations":[85055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030908"},{"annotations":[85677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030909"},{"annotations":[86230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010258"},{"annotations":[85712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[86643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010457"},{"annotations":[86974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010398"},{"annotations":[86633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010574"},{"annotations":[86809,86810,86811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010355"},{"annotations":[86647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010461"},{"annotations":[86426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010286"},{"annotations":[84831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010665"},{"annotations":[84807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010655"},{"annotations":[85899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010306"},{"annotations":[85672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015601"},{"annotations":[85061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010496"}]},"cv_name":"mondo","definition":"A syndromic intellectual disability with an X-linked mode of inheritance.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"X-linked intellectual disability","termid":"MONDO:0100284"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00293":null,"SJAG_00379":null,"SJAG_00466":null,"SJAG_00992":null,"SJAG_01047":null,"SJAG_01448":null,"SJAG_01465":null,"SJAG_01540":null,"SJAG_01581":null,"SJAG_02371":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03900":null,"SJAG_04056":null,"SJAG_04176":null,"SJAG_04235":null,"SJAG_04631":null,"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:309510","Orphanet:98464","DOID:0060309"],"synonyms":[{"name":"X-linked syndromic intellectual disability","type":"exact"},{"name":"intellectual disability, X-linked syndromic","type":"exact"},{"name":"mental retardation, X-linked syndromic","type":"exact"},{"name":"syndromic X-linked intellectual disability","type":"exact"},{"name":"syndromic X-linked mental retardation","type":"exact"},{"name":"syndromic intellectual disability, X-linked","type":"exact"}],"termid":"MONDO:0020119","terms_by_termid":{"MONDO:0010258":null,"MONDO:0010286":null,"MONDO:0010306":null,"MONDO:0010333":null,"MONDO:0010355":null,"MONDO:0010398":null,"MONDO:0010407":null,"MONDO:0010457":null,"MONDO:0010461":null,"MONDO:0010477":null,"MONDO:0010496":null,"MONDO:0010500":null,"MONDO:0010561":null,"MONDO:0010574":null,"MONDO:0010590":null,"MONDO:0010655":null,"MONDO:0010665":null,"MONDO:0010671":null,"MONDO:0015601":null,"MONDO:0030908":null,"MONDO:0030909":null},"xrefs":{"Monarch":{"xref_id":"0020119"}}}


id: PBO:0083317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF HSE1/YHL002W","termid":"PBO:0083317"}


id: PBO:0072185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 1","termid":"PBO:0072185"}


id: GO:0021607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the accessory nerve is generated and organized. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"accessory nerve development","termid":"GO:0021565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve morphogenesis","synonyms":[{"name":"CN XI morphogenesis","type":"related"}],"termid":"GO:0021607"}


id: GO:0003917
data:
  {"annotated_genes":["SJAG_04816","SJAG_05193"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70090,72507],"is_not":false,"summary":null,"term":"GO:0003917"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA topoisomerase type I (single strand cut, ATP-independent) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:5.99.1.2-RXN","EC:5.6.2.1","Reactome:R-HSA-9914922"],"synonyms":[{"name":"DNA topoisomerase I activity","type":"narrow"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"nicking-closing enzyme activity","type":"related"},{"name":"omega-protein activity","type":"related"},{"name":"relaxing enzyme activity","type":"related"},{"name":"swivelase activity","type":"related"},{"name":"topoisomerase","type":"broad"},{"name":"type I DNA topoisomerase activity","type":"exact"},{"name":"type I topoisomerase activity","type":"exact"},{"name":"untwisting enzyme activity","type":"related"}],"termid":"GO:0003917","terms_by_termid":{"GO:0003917":null}}


id: PBO:0065168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase 1","termid":"PBO:0065168"}


id: SO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by RNA interference.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_RNA_interference","synonyms":[{"name":"silenced by RNA interference","type":"exact"}],"termid":"SO:0001220"}


id: PBO:0077029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-histidine guanylyltransferase 1 like","termid":"PBO:0077029"}


id: MONDO:0004220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary endometrioid adenocarcinoma of the endometrium characterized by the presence of spindled malignant epithelial cells.","definition_xrefs":["NCIT:C27850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrium adenocarcinoma","termid":"MONDO:0005461"},{"relation_name":"is_a","term_name":"endometrial endometrioid adenocarcinoma","termid":"MONDO:0006192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial endometrioid adenocarcinoma with spindled epithelial cells","secondary_identifiers":["UMLS:C1336913","DOID:7436","MEDGEN:234979"],"synonyms":[{"name":"endometrial endometrioid adenocarcinoma with spindled epithelial cells","type":"exact"},{"name":"sarcomatoid uterine corpus endometrioid adenocarcinoma","type":"exact"}],"termid":"MONDO:0004220","xrefs":{"Monarch":{"xref_id":"0004220"}}}


id: PBO:0062709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily H member 1","termid":"PBO:0062709"}


id: GO:1901897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["PMID:19708671","GOC:BHF","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"}


id: PBO:0077968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 20-1","termid":"PBO:0077968"}


id: PBO:0054101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1460","termid":"PBO:0054101"}


id: PBO:0088880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anillin-related medial ring protein Mid1","termid":"PBO:0088880"}


id: GO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cGMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"intracellularly cGMP-activated cation channel activity","synonyms":[{"name":"intracellular cGMP activated cation channel activity","type":"exact"},{"name":"intracellular cGMP-activated cation channel activity","type":"exact"}],"termid":"GO:0005223"}


id: MONDO:0007668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"globulin anomaly involving beta (2A)-globulin","secondary_identifiers":["MEDGEN:330741","MESH:C564229","OMIM:137900","UMLS:C1842009"],"synonyms":[{"name":"globulin anomaly involving beta (2A)-globulin","type":"exact"}],"termid":"MONDO:0007668","xrefs":{"Monarch":{"xref_id":"0007668"}}}


id: PBO:0041214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 2","termid":"PBO:0041214"}


id: PR:O13886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC823.02 gene.","definition_xrefs":["UniProtKB:O13886","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C823.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.02","synonyms":[{"name":"Spom972h-SPAC823.02","type":"exact"}],"termid":"PR:O13886"}


id: FYPO:0007894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is increased at subtelomeric heterochromatin. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PMID:34731638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein ubiquitination during vegetative growth","termid":"FYPO:0002082"},{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H2B-K119 ubiquitination at subtelomeric heterochromatin","termid":"FYPO:0007894"}


id: PBO:0041004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC-1 related complex subunit 6","termid":"PBO:0041004"}


id: PBO:0035839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_prospore_membrane_formation","termid":"PBO:0035839"}


id: _global:has_quality
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_quality","secondary_identifiers":["RO:0000086"],"termid":"_global:has_quality"}


id: PBO:0038988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor beta 2","termid":"PBO:0038988"}


id: PBO:0001595
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe CAF-1 First subunit","termid":"PBO:0001595"}


id: GO:0008716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 D-alanine + ATP = D-alanyl-D-alanine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.4","RHEA:11224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"D-alanine-D-alanine ligase activity","secondary_identifiers":["KEGG_REACTION:R01150","MetaCyc:DALADALALIG-RXN"],"synonyms":[{"name":"D-Ala-D-Ala synthetase activity","type":"related"},{"name":"D-alanine:D-alanine ligase (ADP-forming)","type":"related"},{"name":"D-alanyl-D-alanine synthetase activity","type":"related"},{"name":"D-alanylalanine synthetase activity","type":"related"},{"name":"alanine:alanine ligase (ADP-forming) activity","type":"related"},{"name":"alanylalanine synthetase activity","type":"related"}],"termid":"GO:0008716"}


id: PBO:0084125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexameric DNA polymerase alpha-associated DNA helicase A; involved in lagging strand DNA synthesis; contains single-stranded DNA stimulated ATPase and dATPase activities; replication protein A stimulates helicase and ATPase activities","termid":"PBO:0084125"}


id: MOD:01275
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-lysine residue.","definition_xrefs":["Unimod:276#K","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-[4-(2-aminoethyl)benzenesulfonyl]lysine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01275"}


id: GO:1900075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuromuscular synaptic transmission.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of neuromuscular synaptic transmission","termid":"GO:1900073"},{"relation_name":"positively_regulates","term_name":"neuromuscular synaptic transmission","termid":"GO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of neuromuscular synaptic transmission","synonyms":[{"name":"activation of neuromuscular synaptic transmission","type":"related"},{"name":"up regulation of neuromuscular synaptic transmission","type":"related"},{"name":"up-regulation of neuromuscular synaptic transmission","type":"related"},{"name":"upregulation of neuromuscular synaptic transmission","type":"related"}],"termid":"GO:1900075"}


id: FYPO:0007059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to late endosomes is decreased.","definition_xrefs":["PomBase:mah","PMID:31341193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endosome","termid":"FYPO:0007587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to late endosome","synonyms":[{"name":"decreased protein localisation to late endosome","type":"exact"},{"name":"decreased protein localization to PVE","type":"exact"},{"name":"decreased protein localization to late endosome during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to late endosome during vegetative growth","type":"exact"},{"name":"decreased protein localization to prevacuolar compartment","type":"exact"},{"name":"decreased protein localization to prevacuolar endosome","type":"exact"},{"name":"reduced protein localization to late endosome","type":"exact"}],"termid":"FYPO:0007059"}


id: PBO:0091661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Cha4","termid":"PBO:0091661"}


id: PBO:0086221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap185p; SAP190 has a paralog, SAP185, that arose from the whole genome duplication","termid":"PBO:0086221"}


id: FYPO:0004669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ferrozine. Cells stop growing (and may die) at a concentration of ferrozine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to ferrozine","synonyms":[{"name":"hypersensitive to ferrozine","type":"exact"},{"name":"sensitive to ferrozine during mitotic cell cycle","type":"related"},{"name":"sensitive to ferrozine during vegetative growth","type":"exact"},{"name":"sensitive to ferrozine(2-)","type":"exact"}],"termid":"FYPO:0004669"}


id: PBO:0059840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR2 pseudogene 2","termid":"PBO:0059840"}


id: PATO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001147 absolute resistance value (obsolete PATO:0001147)","termid":"PATO:0001147"}


id: PBO:0005905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase 2 (predicted)","termid":"PBO:0005905"}


id: PBO:0080465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1 pseudogene 1","termid":"PBO:0080465"}


id: MONDO:0700106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immune system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune system disorder, non-human animal","termid":"MONDO:0700106","xrefs":{"Monarch":{"xref_id":"0700106"}}}


id: MONDO:0035075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary early-onset glaucoma of genetic origin (obsolete MONDO:0035075)","secondary_identifiers":["Orphanet:522580"],"termid":"MONDO:0035075","xrefs":{"Monarch":{"xref_id":"0035075"}}}


id: PBO:0066430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG antisense RNA 1","termid":"PBO:0066430"}


id: GO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"CXCL1 production","type":"exact"},{"name":"KC production","type":"exact"},{"name":"SCYB1 production","type":"exact"},{"name":"keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:0072566"}


id: PBO:0083448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BUD31","termid":"PBO:0083448"}


id: PR:O13798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid16 gene.","definition_xrefs":["UniProtKB:O13798","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.01","synonyms":[{"name":"Spom972h-cid16","type":"exact"}],"termid":"PR:O13798"}


id: PBO:0060857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 3","termid":"PBO:0060857"}


id: PBO:0043753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 1","termid":"PBO:0043753"}


id: PBO:0017422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-location_of","termid":"PBO:0017422"}


id: MONDO:0009596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaphyseal chondrodysplasia","termid":"MONDO:0000138"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal chondrodysplasia, Pena type","secondary_identifiers":["MESH:C565399","OMIM:250300","MEDGEN:343289","UMLS:C1855195"],"synonyms":[{"name":"metaphyseal chondrodysplasia, Pena type","type":"exact"}],"termid":"MONDO:0009596","xrefs":{"Monarch":{"xref_id":"0009596"}}}


id: FYPO:0006209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation","termid":"FYPO:0006208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation","type":"exact"},{"name":"decreased transcript level during cellular response to copper ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation","type":"exact"}],"termid":"FYPO:0006209"}


id: PBO:0052131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 3","termid":"PBO:0052131"}


id: GO:0044560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of an ion channel in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of ion channel activity in other organism","type":"exact"},{"name":"envenomation resulting in regulation of ion channel activity in other organism","type":"exact"}],"termid":"GO:0044560"}


id: PBO:0091807
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus rsv1","termid":"PBO:0091807"}


id: GO:0052628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + L-glutamate + ATP = N-(4-hydroxybenzoyl)-L-glutamate + AMP + diphosphate + H+.","definition_xrefs":["PMID:19189963","MetaCyc:RXN-10887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-(4-hydroxybenzoyl)-L-glutamate synthetase activity","synonyms":[{"name":"4-hydroxybenzoate amino acid synthetase activity","type":"broad"},{"name":"4-hydroxybenzoyl amino acid synthetase activity","type":"exact"},{"name":"4HBA amino acid synthetase activity","type":"exact"},{"name":"p-hydroxybenzoate amino acid synthetase activity","type":"exact"},{"name":"p-hydroxybenzoyl amino acid synthetase activity","type":"exact"}],"termid":"GO:0052628"}


id: GO:0110039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nematode male tail tip morphogenesis.","definition_xrefs":["PMID:28068334","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of nematode male tail tip morphogenesis","termid":"GO:0110037"},{"relation_name":"positively_regulates","term_name":"nematode male tail tip morphogenesis","termid":"GO:0045138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode male tail tip morphogenesis","termid":"GO:0110039"}


id: MONDO:0014728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the CARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 27","secondary_identifiers":["Orphanet:477774","MEDGEN:1799031","OMIM:616672","UMLS:C5567608","DOID:0111489","GARD:17856"],"synonyms":[{"name":"CARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"COXPD27","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 27","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in CARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 27","type":"exact"}],"termid":"MONDO:0014728","xrefs":{"Monarch":{"xref_id":"0014728"}}}


id: PBO:0073035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCTR antisense RNA 1","termid":"PBO:0073035"}


id: MONDO:0100161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal tubular acidosis (RTA) that is caused by a generalized transport abnormality of the distal tubule. The transport of electrolytes such as sodium, chloride, and potassium that normally occurs in the distal tubule is impaired. This form is distinguished from classical distal RTA and proximal RTA because it results in high levels of potassium in the blood instead of low levels.","direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular acidosis","termid":"MONDO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"hyperkalemic renal tubular acidosis","secondary_identifiers":["MEDGEN:87662","Orphanet:89939","UMLS:C0376185"],"synonyms":[{"name":"hyperkalemic RTA","type":"exact"},{"name":"renal tubular acidosis type 4","type":"exact"},{"name":"type 4 RTA","type":"exact"},{"name":"type 4 renal tubular acidosis","type":"exact"}],"termid":"MONDO:0100161","xrefs":{"Monarch":{"xref_id":"0100161"}}}


id: PBO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicrotuBule Organizer","termid":"PBO:0005596"}


id: PBO:0003924
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.15","termid":"PBO:0003924"}


id: GO:0048012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a hepatocyte growth factor receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hepatocyte growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-8852405"],"synonyms":[{"name":"HGF receptor signaling pathway","type":"exact"},{"name":"HGF receptor signalling pathway","type":"exact"},{"name":"Met signaling pathway","type":"narrow"}],"termid":"GO:0048012"}


id: PBO:0064193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 1","termid":"PBO:0064193"}


id: GO:0140530
data:
  {"annotated_genes":["SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103109],"is_not":false,"summary":null,"term":"GO:0140530"}]},"cv_name":"biological_process","definition":"The protein localization process in which two MCM complexes become associated with chromatin at replication origins. MCM loading begins when origin-bound ORC and Cdc6 (Cdc18 in fission yeast) recruit one MCM2-7/Cdt1 complex to the origin, includes formation of a succession of intermediate complexes and ATP hydrolysis-dependent Mcm2-7 ring closure, and ends when two MCM hexamers fully encircle DNA, and are oriented head-to-head. The double hexamer is inactive for DNA unwinding. MCM loading takes place during G1 phase, and precedes CMG complex assembly.","definition_xrefs":["PMID:28191894","PMID:28191893","PMID:28501329","PMID:23603117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"nuclear cell cycle DNA replication initiation","termid":"GO:1902315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0065003","GO:0006259","GO:0044085","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"MCM complex loading","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MCM complex loading at replication origin","type":"exact"},{"name":"MCM double hexamer formation at replication origin","type":"exact"}],"termid":"GO:0140530","terms_by_termid":{"GO:0140530":null}}


id: PBO:0052166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 14","termid":"PBO:0052166"}


id: PBO:0034239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-target_participant_in","termid":"PBO:0034239"}


id: PBO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4 (predicted)","termid":"PBO:0001758"}


id: PBO:0003202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U4","termid":"PBO:0003202"}


id: GO:0060513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a region of the fetal urogenital sinus epithelium is specified to become the prostate, resulting in prostate bud outgrowth.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial bud","termid":"GO:0060572"},{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostatic bud formation","synonyms":[{"name":"primary prostate bud formation","type":"exact"},{"name":"prostate ductal budding","type":"exact"},{"name":"prostate gland formation","type":"exact"}],"termid":"GO:0060513"}


id: PBO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug123","termid":"PBO:0017067"}


id: PBO:0088306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus1","termid":"PBO:0088306"}


id: PBO:0060404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 15, NatA auxiliary subunit","termid":"PBO:0060404"}


id: GO:0009533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Unstacked thylakoids that connect the grana stacks through the stroma.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid","termid":"GO:0009534"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast stromal thylakoid","termid":"GO:0009533"}


id: GO:0003789
data:
  {"annotated_genes":["SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92300],"is_not":false,"summary":null,"term":"GO:0003789"}]},"cv_name":"molecular_function","definition":"Binding to an actin subunit and promoting its dissociation from an actin filament by a local change in actin subunit conformation and orientation, and severing of filaments.","definition_xrefs":["PMID:23395798","PMID:23727096","PMID:11812157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"actin filament severing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin depolymerizing activity","type":"exact"}],"termid":"GO:0003789","terms_by_termid":{"GO:0003789":null}}


id: GO:0097066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.","definition_xrefs":["PMID:9916872","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thyroid hormone","synonyms":[{"name":"response to thyroid hormone stimulus","type":"exact"}],"termid":"GO:0097066"}


id: MONDO:0005097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from squamous bronchial epithelial cells. It may be keratinizing or non-keratinizing. Keratinizing squamous cell carcinoma is characterized by the presence of keratinization, pearl formation, and/or intercellular bridges. Non-keratinizing squamous cell carcinoma is characterized by the absence of keratinization, pearl formation, and intercellular bridges. Cigarette smoking and arsenic exposure are strongly associated with squamous cell lung carcinoma.","definition_xrefs":["NCIT:C3493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"squamous cell lung carcinoma","secondary_identifiers":["DOID:3907","ONCOTREE:LUSC","MEDGEN:56202","ICD9:162.9","SCTID:254634000","EFO:0000708","UMLS:C0149782"],"synonyms":[{"name":"epidermoid cell carcinoma of lung","type":"exact"},{"name":"epidermoid cell carcinoma of the lung","type":"exact"},{"name":"epidermoid cell lung carcinoma","type":"exact"},{"name":"lung squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of lung","type":"exact"},{"name":"squamous cell carcinoma of the lung","type":"exact"},{"name":"squamous cell lung cancer","type":"exact"},{"name":"squamous cell lung carcinoma","type":"exact"}],"termid":"MONDO:0005097","xrefs":{"Monarch":{"xref_id":"0005097"}}}


id: GO:1905669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TORC1 complex.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","GOC:kmv","PMID:21952218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"TORC1 complex assembly","synonyms":[{"name":"TOR complex 1 assembly","type":"exact"},{"name":"TOR complex 1 formation","type":"exact"},{"name":"TORC 1 complex assembly","type":"exact"},{"name":"TORC 1 complex formation","type":"exact"},{"name":"TORC1 assembly","type":"exact"},{"name":"TORC1 complex formation","type":"exact"},{"name":"TORC1 formation","type":"exact"},{"name":"dTOR/dRaptor complex assembly","type":"narrow"},{"name":"dTOR/dRaptor complex formation","type":"narrow"},{"name":"dTORC1 assembly","type":"narrow"},{"name":"dTORC1 formation","type":"narrow"},{"name":"mTORC1 assembly","type":"narrow"},{"name":"mTORC1 formation","type":"narrow"},{"name":"nutrient sensitive complex assembly","type":"exact"},{"name":"nutrient sensitive complex formation","type":"exact"},{"name":"rapamycin and nutrient-sensitive TOR complex assembly","type":"exact"},{"name":"rapamycin and nutrient-sensitive TOR complex formation","type":"exact"}],"termid":"GO:1905669"}


id: MONDO:0015603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare odontal or periodontal disorder (obsolete MONDO:0015603)","secondary_identifiers":["Orphanet:164001"],"termid":"MONDO:0015603","xrefs":{"Monarch":{"xref_id":"0015603"}}}


id: FYPO:0003382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular acetate level","synonyms":[{"name":"increased acetate accumulation","type":"related"},{"name":"increased cellular acetate level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetate level during vegetative growth","type":"exact"}],"termid":"FYPO:0003382"}


id: PBO:0085388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane H+-pantothenate symporter; confers sensitivity to the antifungal agent fenpropimorph; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085388"}


id: PBO:0083422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YPL034W; YPL035C is not an essential gene","termid":"PBO:0083422"}


id: GO:1990842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis in the embryo or fetus during pregnancy.","definition_xrefs":["PMID:22738222"],"gene_count":0,"genotype_count":0,"name":"obsolete response to prenatal stress (obsolete GO:1990842)","synonyms":[{"name":"response to PNS","type":"exact"}],"termid":"GO:1990842"}


id: GO:1901295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:1901295)","synonyms":[{"name":"regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901295"}


id: GO:0033977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (S)-2-haloacid + H2O = (S)-2-hydroxyacid + halide, and (R)-2-haloacid + H2O = (R)-2-hydroxyacid + halide.","definition_xrefs":["RHEA:12072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-haloacid dehalogenase (configuration-retaining) activity","secondary_identifiers":["MetaCyc:3.8.1.11-RXN","EC:3.8.1.11"],"synonyms":[{"name":"2-haloalkanoic acid dehalogenase activity","type":"broad"},{"name":"2-haloalkanoid acid halidohydrolase activity","type":"broad"},{"name":"DL-2-haloacid dehalogenase activity","type":"broad"},{"name":"DL-DEXr","type":"related"}],"termid":"GO:0033977"}


id: PBO:0075402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17 pseudogene 1","termid":"PBO:0075402"}


id: PBO:0060741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 6","termid":"PBO:0060741"}


id: GO:0071861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tachykinin receptor.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"tachykinin receptor binding","termid":"GO:0071861"}


id: PBO:0034733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit SUMO ligase subunit Nse2","termid":"PBO:0034733"}


id: PBO:0031705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_necrotic_cell_death_(obsolete_FYPO:0000505)","termid":"PBO:0031705"}


id: MONDO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of spindle to ovoid cells which show phenotypic features similar to those of interdigitating dendritic cells. The clinical course is generally aggressive. (WHO, 2008)","definition_xrefs":["NCIT:C9282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"interdigitating dendritic cell sarcoma","secondary_identifiers":["DOID:7848","icd11.foundation:2024362257","MEDGEN:266040","EFO:0007329","MESH:D054739","NANDO:2200035","SCTID:715664005","ICDO:9757/1","UMLS:C1260326","ICDO:9757/3","icd11.foundation:214592620","ONCOTREE:IDCS"],"synonyms":[{"name":"interdigitating Dendritic cell sarcoma","type":"exact"},{"name":"interdigitating Dendritic cell sarcoma/tumor","type":"exact"},{"name":"interdigitating cell sarcoma","type":"broad"},{"name":"interdigitating cell sarcoma/tumor","type":"exact"}],"termid":"MONDO:0005813","xrefs":{"Monarch":{"xref_id":"0005813"}}}


id: PBO:0111759
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain","termid":"PBO:0111759"}


id: GO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of the DSCAM-based immune receptors of insects.","definition_xrefs":["GOC:add","PMID:16261174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of DSCAM-based immune receptors","termid":"GO:0002201"}


id: PBO:0028135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_pseudouridine_synthesis_abolished_at_specific_site","termid":"PBO:0028135"}


id: PBO:0091114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4","termid":"PBO:0091114"}


id: PBO:0058889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10526","termid":"PBO:0058889"}


id: MONDO:0020576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the blood vessel wall characterized by palpable purpura.","definition_xrefs":["NCIT:C112210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous vasculitis","secondary_identifiers":["MEDGEN:488809","UMLS:C0262988"],"synonyms":[{"name":"cutaneous vasculitis","type":"exact"}],"termid":"MONDO:0020576","xrefs":{"Monarch":{"xref_id":"0020576"}}}


id: GO:0042941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-alanine, the D-enantiomer of 2-aminopropanoic acid,  is transported across a lipid bilayer, from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GO:ew","GOC:mah","GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"alanine transport","termid":"GO:0032328"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"D-alanine transmembrane transport","termid":"GO:0042941"}


id: PBO:0046149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elaC ribonuclease Z 2","termid":"PBO:0046149"}


id: MOD:00640
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-N-biotinylaminohexyl isopropyl phosphorofluoridate","synonyms":[{"name":"6-N-biotinylaminohexyl isopropyl phosphate","type":"related"},{"name":"Can-FP-biotin","type":"related"}],"termid":"MOD:00640"}


id: PBO:0054554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1955","termid":"PBO:0054554"}


id: GO:1905373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ceramide phosphoethanolamine.","definition_xrefs":["GO_REF:0000068","PMID:25667419","GOC:TermGenie","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"ceramide phosphoethanolamine metabolic process","termid":"GO:1905371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ceramide phosphoethanolamine biosynthetic process","synonyms":[{"name":"ceramide phosphoethanolamine anabolism","type":"exact"},{"name":"ceramide phosphoethanolamine biosynthesis","type":"exact"},{"name":"ceramide phosphoethanolamine formation","type":"exact"},{"name":"ceramide phosphoethanolamine synthesis","type":"exact"}],"termid":"GO:1905373"}


id: PATO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fragility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fragile","termid":"PATO:0001362"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fragility","termid":"PATO:0002055"}


id: GO:1905047
data:
  {"annotated_genes":["SJAG_04745","SJAG_00794","SJAG_02795","SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98060],"is_not":false,"summary":null,"term":"GO:1905047"},{"annotations":[75401,95069,77442],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitotic spindle pole body.","definition_xrefs":["PMID:24963130","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_02795":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"mitotic spindle pole body organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1905047","terms_by_termid":{"GO:0000073":null,"GO:1905047":null}}


id: GO:0141147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when calcium ions bind on the intracellular side of the channel complex or one of its constituent parts.","definition_xrefs":["PMID:20929730","PMID:23021213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intracellularly calcium-gated channel activity","termid":"GO:0141147"}


id: PBO:0045464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D1","termid":"PBO:0045464"}


id: MONDO:0007010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uveitis (obsolete MONDO:0007010)","termid":"MONDO:0007010","xrefs":{"Monarch":{"xref_id":"0007010"}}}


id: GO:0018974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid. It is prepared from toluene treated with concentrated sulfuric and nitric acids and is used in shells, bombs, and blasting explosives.","definition_xrefs":["ISBN:0333781767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trinitrotoluene metabolic process","termid":"GO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,4,6-trinitrotoluene metabolic process","synonyms":[{"name":"2,4,6-trinitrotoluene metabolism","type":"exact"},{"name":"TNT metabolic process","type":"exact"},{"name":"TNT metabolism","type":"exact"}],"termid":"GO:0018974"}


id: PBO:0045679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 light intermediate chain 1","termid":"PBO:0045679"}


id: FYPO:0003315
data:
  {"alleles_by_uniquename":{"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119425],"is_not":false,"summary":null,"term":"FYPO:0003315"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable actin cables.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":1,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"actin cables absent from cell","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta"],"synonyms":[{"name":"absent actin cables","type":"exact"},{"name":"actin cables absent from cell during mitotic cell cycle","type":"related"},{"name":"actin cables absent from cell during vegetative growth","type":"exact"},{"name":"formin-nucleated actin cables absent from cell","type":"exact"}],"termid":"FYPO:0003315","terms_by_termid":{"FYPO:0003315":null}}


id: PBO:0082066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase; catalyzes the last of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants are sterol auxotrophs; mutation is functionally complemented by human HSD17B7","termid":"PBO:0082066"}


id: PBO:0045995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2B","termid":"PBO:0045995"}


id: PBO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal defects","termid":"PBO:0001159"}


id: GO:0030728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:bf","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation","secondary_identifiers":["Wikipedia:Ovulation"],"termid":"GO:0030728"}


id: PBO:0084986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent glutamate dehydrogenase; synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh1p; expression regulated by nitrogen and carbon sources; GDH3 has a paralog, GDH1, that arose from the whole genome duplication","termid":"PBO:0084986"}


id: PBO:0073755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A9 antisense RNA 1","termid":"PBO:0073755"}


id: GO:1901886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-hydroxybenzoyl-CoA.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"},{"relation_name":"is_a","term_name":"2-hydroxybenzoyl-CoA metabolic process","termid":"GO:1901885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA catabolic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA breakdown","type":"exact"},{"name":"2-hydroxybenzoyl-CoA catabolism","type":"exact"},{"name":"2-hydroxybenzoyl-CoA degradation","type":"exact"}],"termid":"GO:1901886"}


id: FYPO:0001262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which the cell diameter is larger than normal and the cell length is shorter than normal, during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete stubby cell during cellular hyperosmotic response (obsolete FYPO:0001262)","synonyms":[{"name":"stubby cell during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"stubby cell during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"watermelon-shaped cell during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001262"}


id: PBO:0042413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25C","termid":"PBO:0042413"}


id: PBO:0082929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial alanyl-tRNA synthetase; required for protein synthesis; point mutation (cdc64-1 allele) causes cell cycle arrest at G1; lethality of null mutation is functionally complemented by human homolog AARS; mutations in human homolog AARS are associated with autoimmune disease polymyositis/dermatomyositis and with hereditary peripheral neuropathy, Charcot-Marie-Tooth (CMT) disease","termid":"PBO:0082929"}


id: GO:0002667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"is_a","term_name":"regulation of lymphocyte anergy","termid":"GO:0002911"},{"relation_name":"regulates","term_name":"T cell anergy","termid":"GO:0002870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell anergy","synonyms":[{"name":"regulation of T lymphocyte anergy","type":"exact"},{"name":"regulation of T-cell anergy","type":"exact"},{"name":"regulation of T-lymphocyte anergy","type":"exact"}],"termid":"GO:0002667"}


id: GO:0140974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a sulfide. These may include chemical modification or transport of sulfide away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["PMID:20077566","PMID:25747485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of sulfide","termid":"GO:0140974"}


id: PBO:0056678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2C","termid":"PBO:0056678"}


id: PBO:0063444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6H","termid":"PBO:0063444"}


id: PBO:0088140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; VPS62 has a paralog, TDA6, that arose from the whole genome duplication","termid":"PBO:0088140"}


id: PR:P87122
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A12.06c gene.","definition_xrefs":["UniProtKB:P87122","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation exchanger C3A12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.06c","synonyms":[{"name":"Spom972h-SPAC3A12.06c","type":"exact"}],"termid":"PR:P87122"}


id: PBO:0116468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHE domain cation binding protein, implicated in the repair of iron-sulfur clusters damaged by oxidative and nitrosative stress","termid":"PBO:0116468"}


id: GO:0045723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of fatty acid biosynthetic process","synonyms":[{"name":"activation of fatty acid biosynthetic process","type":"narrow"},{"name":"positive regulation of fatty acid anabolism","type":"exact"},{"name":"positive regulation of fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of fatty acid formation","type":"exact"},{"name":"positive regulation of fatty acid synthesis","type":"exact"},{"name":"stimulation of fatty acid biosynthetic process","type":"narrow"},{"name":"up regulation of fatty acid biosynthetic process","type":"exact"},{"name":"up-regulation of fatty acid biosynthetic process","type":"exact"},{"name":"upregulation of fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0045723"}


id: PBO:0082492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; contains a RING-H2 domain that is required for activity","termid":"PBO:0082492"}


id: PBO:0085877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0085877"}


id: PBO:0080300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 64 pseudogene","termid":"PBO:0080300"}


id: GO:0004176
data:
  {"annotated_genes":["SJAG_01816","SJAG_00984","SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63876,72025,77963],"is_not":false,"summary":null,"term":"GO:0004176"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00984":null,"SJAG_01179":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0008233","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9838004","Reactome:R-HSA-9838289","Reactome:R-HSA-9839059","Reactome:R-HSA-9839146","Reactome:R-HSA-9839751","Reactome:R-HSA-9839105","Reactome:R-HSA-9839113","Reactome:R-HSA-9838081","GO:0004280","Reactome:R-HSA-9698929"],"synonyms":[{"name":"ATP-dependent proteolysis","type":"related"}],"termid":"GO:0004176","terms_by_termid":{"GO:0004176":null}}


id: PBO:0047283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group G","termid":"PBO:0047283"}


id: PBO:0088372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein bridging factor Mbf1","termid":"PBO:0088372"}


id: GO:0038189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a neuropilin protein on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","PMID:12852851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuropilin signaling pathway","synonyms":[{"name":"Npn signaling","type":"exact"}],"termid":"GO:0038189"}


id: GO:1905572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ganglioside GM1 to membrane.","definition_xrefs":["GO_REF:0000078","GOC:TermGenie","PMID:1454804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"},{"relation_name":"is_a","term_name":"glycolipid transport","termid":"GO:0046836"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ganglioside GM1 transport to membrane","termid":"GO:1905572"}


id: GO:0003424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization that results in the directional division of a growth plate cartilage chondrocyte.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte division","termid":"GO:0003423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of cell polarity involved in growth plate cartilage chondrocyte division","synonyms":[{"name":"growth plate cartilage chondrocyte polarization","type":"related"}],"termid":"GO:0003424"}


id: PATO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A waxiness which is relatively low.","direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased waxiness","termid":"PATO:0002383"}


id: PBO:0072569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal pigment epithelium-derived rhodopsin homolog","termid":"PBO:0072569"}


id: PBO:0069832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1118, pseudogene","termid":"PBO:0069832"}


id: PBO:0109145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRUNE1 pseudogene 1","termid":"PBO:0109145"}


id: PBO:0055768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark, ER junction formation factor","termid":"PBO:0055768"}


id: MONDO:0017937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"autosomal dominant intermediate Charcot-Marie-Tooth disease with neuropathic pain","secondary_identifiers":["GARD:21446","Orphanet:324585","UMLS:C4755257","MEDGEN:1650625"],"termid":"MONDO:0017937","xrefs":{"Monarch":{"xref_id":"0017937"}}}


id: MONDO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of breast fibroadenoma without clinical significance. It is characterized by circumferential proliferation of stromal cells around the ducts. This results in the formation of rounded ductal-epithelial structures.","definition_xrefs":["NCIT:C4272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibroadenoma","termid":"MONDO:0002056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast pericanalicular fibroadenoma","secondary_identifiers":["DOID:2639","MEDGEN:90794","ICDO:9012/0","UMLS:C0334497"],"synonyms":[{"name":"breast pericanalicular fibroadenoma","type":"exact"},{"name":"pericanalicular breast fibroadenoma","type":"exact"},{"name":"pericanalicular fibroadenoma","type":"exact"},{"name":"pericanalicular fibroadenoma (morphologic abnormality)","type":"exact"},{"name":"pericanalicular fibroadenoma of breast","type":"exact"},{"name":"pericanalicular fibroadenoma of the breast","type":"exact"}],"termid":"MONDO:0002371","xrefs":{"Monarch":{"xref_id":"0002371"}}}


id: GO:0030131
data:
  {"annotated_genes":["SJAG_04931","SJAG_02805","SJAG_01167","SJAG_00800","SJAG_00379","SJAG_04565","SJAG_00104","SJAG_04609","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63200],"is_not":false,"summary":null,"term":"GO:0030131"},{"annotations":[112797,77525,61895,112581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[74074,108131,58188,77844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane coat adaptor complex that links clathrin to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"},{"relation_name":"part_of","term_name":"clathrin coat","termid":"GO:0030118"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02805":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"clathrin adaptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030131","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030131":null}}


id: GO:0042649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Underdeveloped thylakoids found in etioplasts, lacking competent photosynthetic membranes. Rapidly develop into mature thylakoids in the presence of light.","definition_xrefs":["PMID:11532175","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid","termid":"GO:0031976"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"prothylakoid","termid":"GO:0042649"}


id: PBO:0057850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3161","termid":"PBO:0057850"}


id: PBO:0078180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-4","termid":"PBO:0078180"}


id: FYPO:0006610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex for periods of longer duration than normal.","definition_xrefs":["PMID:29514920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"increased duration of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"increased protein dwell time during transient localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006610"}


id: PBO:0058932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12 kinetochore complex component","termid":"PBO:0058932"}


id: PBO:0073816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A17 antisense RNA 1","termid":"PBO:0073816"}


id: PBO:0081277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 44","termid":"PBO:0081277"}


id: PBO:0044198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin G","termid":"PBO:0044198"}


id: MONDO:0018432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mucinosis","termid":"MONDO:0002523"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen myxedematosus","secondary_identifiers":["SCTID:111197009","MEDGEN:1848864","UMLS:C5848049","ICD9:701.8","GARD:21709","Orphanet:402007"],"synonyms":[{"name":"lichen myxoedematosus","type":"exact"},{"name":"lichenoid myxedema","type":"related"},{"name":"papular mucinosis","type":"related"}],"termid":"MONDO:0018432","xrefs":{"Monarch":{"xref_id":"0018432"}}}


id: GO:0016709
data:
  {"annotated_genes":["SJAG_00370","SJAG_04608","SJAG_00459","SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160224"},{"annotations":[57454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004499"},{"annotations":[76865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004506"},{"annotations":[88223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00459":null,"SJAG_03750":null,"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-211951","Reactome:R-HSA-2162194","Reactome:R-HSA-2162187","Reactome:R-HSA-6786239"],"synonyms":[{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen","type":"related"}],"termid":"GO:0016709","terms_by_termid":{"GO:0004499":null,"GO:0004506":null,"GO:0008398":null,"GO:0160224":null}}


id: PBO:0017692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1 (predicted)","termid":"PBO:0017692"}


id: MONDO:0020365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hereditary endothelial dystrophy I (CHED I) is a rare subtype of posterior corneal dystrophy characterized by a diffuse ground-glass appearance of the corneas and marked corneal thickening from birth or infancy without nystagmus, with blurred vision.","definition_xrefs":["Orphanet:98975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior corneal dystrophy","termid":"MONDO:0020214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital hereditary endothelial dystrophy type I","secondary_identifiers":["SCTID:416633008","MEDGEN:736888","GARD:19610","OMIM:121700","UMLS:C1562945"],"synonyms":[{"name":"CHED1","type":"exact"},{"name":"CHEDI","type":"exact"},{"name":"autosomal dominant CHED","type":"exact"},{"name":"autosomal dominant congenital hereditary endothelial dystrophy","type":"exact"},{"name":"congenital hereditary endothelial dystrophy type 1","type":"exact"}],"termid":"MONDO:0020365","xrefs":{"Monarch":{"xref_id":"0020365"}}}


id: GO:0015413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ni2+(out) = ADP + phosphate + Ni2+(in).","definition_xrefs":["RHEA:15557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type nickel transporter activity","secondary_identifiers":["GO:0102016","EC:7.2.2.11","MetaCyc:ABC-20-RXN"],"synonyms":[{"name":"ATP-dependent nickel transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled nickel transmembrane transporter activity","type":"related"},{"name":"nickel ABC transporter","type":"exact"},{"name":"nickel ABC transporter activity","type":"exact"},{"name":"nickel porter activity","type":"related"},{"name":"nickel transporting ATPase activity","type":"related"},{"name":"nickel-transporting ATPase activity","type":"related"}],"termid":"GO:0015413"}


id: PBO:0040118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 5","termid":"PBO:0040118"}


id: PBO:0049511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 18","termid":"PBO:0049511"}


id: MONDO:0859528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 89","secondary_identifiers":["OMIM:620284","UMLS:C5830357","MEDGEN:1840993"],"termid":"MONDO:0859528","xrefs":{"Monarch":{"xref_id":"0859528"}}}


id: MONDO:0015583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The 2p21 microdeletion syndrome consists of cystinuria, neonatal seizures, hypotonia, severe growth and developmental delay, facial dysmorphism, and lactic acidemia.","definition_xrefs":["Orphanet:163693"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypotonia-cystinuria syndrome","termid":"MONDO:0011669"},{"relation_name":"excluded_subClassOf","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 2","termid":"MONDO:0016884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2p21 microdeletion syndrome","secondary_identifiers":["MEDGEN:930206","SCTID:719652007","GARD:16999","UMLS:C4304537","DECIPHER:87"],"synonyms":[{"name":"2p21 deletion syndrome","type":"exact"},{"name":"2p21 microdeletion syndrome","type":"exact"},{"name":"Del(2)(p21)","type":"exact"},{"name":"monosomy 2p21","type":"exact"}],"termid":"MONDO:0015583","xrefs":{"Monarch":{"xref_id":"0015583"}}}


id: MONDO:0859329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 4","secondary_identifiers":["OMIM:620153","DOID:0060981","UMLS:C5774267","MEDGEN:1824040"],"termid":"MONDO:0859329","xrefs":{"Monarch":{"xref_id":"0859329"}}}


id: MONDO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysfunction of the pulmonary valve characterized by incomplete valve closure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary valve disorder","termid":"MONDO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary valve insufficiency","secondary_identifiers":["icd11.foundation:1093888988","MEDGEN:11031","MESH:D011665","UMLS:C0034088","DOID:14265","SCTID:194995005","NCIT:C50848","NANDO:2200305"],"synonyms":[{"name":"pulmonary incompetence","type":"exact"},{"name":"pulmonary incompetence, non-rheumatic","type":"exact"},{"name":"pulmonary insufficiency following trauma and surgery","type":"exact"},{"name":"pulmonary regurg.","type":"exact"},{"name":"pulmonary regurgitation","type":"exact"},{"name":"pulmonary valve regurgitation","type":"exact"},{"name":"pulmonary valvular regurgitation","type":"exact"},{"name":"pulmonic insufficiency","type":"exact"},{"name":"pulmonic valve regurgitation","type":"exact"},{"name":"regurgitation, pulmonary","type":"exact"}],"termid":"MONDO:0001927","xrefs":{"Monarch":{"xref_id":"0001927"}}}


id: MONDO:0016162
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"}]},"cv_name":"mondo","definition":"Bilateral frontal polymicrogyria is one of the rarest subtypes of polymicrogyria. It is a symmetric and bilateral form (in both brain hemispheres) that only involves the frontal lobes without including the area located behind the Sylvius fissure or the area located behind the Rolando sulcus. Some researchers classify the condition into two different forms: bilateral frontal polymicrogyriaand the bilateral frontoparietal. Signs and symptoms included delayed motor and language milestones; spastic (stiffness) hemiparesis (weakness in one side of the body) or quadriparesis (weakness in all four limbs of the body); and mild to moderate intellectual disability. Seizures mayalsobe present. The frontoparietal form is caused by changes (mutations) in the GPR56 gene but the cause for the frontal form of polymicrogyira is still not known. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral frontal polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:688947844","Orphanet:208444","DOID:0080921","UMLS:C5437679","GARD:10783","MEDGEN:1754014"],"termid":"MONDO:0016162","terms_by_termid":{"MONDO:0012399":null},"xrefs":{"Monarch":{"xref_id":"0016162"}}}


id: SO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect which changes the regulatory region of a gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000053 sequence_variant_affecting_regulatory_region (obsolete SO:0000053)","synonyms":[{"name":"mutation affecting regulatory region","type":"related"},{"name":"sequence variant affecting regulatory region","type":"exact"}],"termid":"SO:0000053"}


id: MONDO:0034965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare ophthalmic disorder with cranial nerve involvement (obsolete MONDO:0034965)","secondary_identifiers":["Orphanet:519349"],"termid":"MONDO:0034965","xrefs":{"Monarch":{"xref_id":"0034965"}}}


id: PATO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000831 absolute visual acuity value (obsolete PATO:0000831)","termid":"PATO:0000831"}


id: PBO:0029792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_actin_cortical_patch","termid":"PBO:0029792"}


id: MONDO:0035295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital primary megaureter","termid":"MONDO:0018960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital primary megaureter, refluxing and obstructed form","secondary_identifiers":["Orphanet:544578","MEDGEN:1843335","GARD:22236","ICD10CM:Q62.2","UMLS:C5681326"],"termid":"MONDO:0035295","xrefs":{"Monarch":{"xref_id":"0035295"}}}


id: PBO:0065479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD14 pseudogene 1","termid":"PBO:0065479"}


id: PBO:0068252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N4","termid":"PBO:0068252"}


id: SO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of one or more sequences of an individual.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_collection","synonyms":[{"name":"variant collection","type":"related"}],"termid":"SO:0001507"}


id: PBO:0068045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 350","termid":"PBO:0068045"}


id: PBO:0074856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 44","termid":"PBO:0074856"}


id: MONDO:0010907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hypertryptophanemia is characterized by intellectual deficit associated with behavioral problems: periodic mood swings, exaggerated affective responses and abnormal sexual behavior. Twelve cases have been reported so far. Congenital abnormalities in tryptophan metabolism appear to be responsible for the tryptophanemia and tryptophanuria.","definition_xrefs":["Orphanet:2224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of tryptophan metabolism","termid":"MONDO:0017350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"familial hypertryptophanemia","secondary_identifiers":["SCTID:721838005","MEDGEN:419177","OMIM:600627","DOID:0111703","GARD:2871","UMLS:C2931837","MESH:C538393"],"synonyms":[{"name":"HYPTRP","type":"related"},{"name":"familial hypertryptophanemia","type":"exact"},{"name":"hypertryptophanemia","type":"broad"},{"name":"hypertryptophanemia, familial","type":"related"}],"termid":"MONDO:0010907","xrefs":{"Monarch":{"xref_id":"0010907"}}}


id: GO:0044330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in positive regulation of wound healing.","definition_xrefs":["GOC:jl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of wound healing (obsolete GO:0044330)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of wound healing","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of wound healing","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of wound healing","type":"exact"}],"termid":"GO:0044330"}


id: PATO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering a bearer by virtue of the bearer's containing or resembling serum.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous","termid":"PATO:0002128"}


id: PBO:0074307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 1","termid":"PBO:0074307"}


id: PBO:0041979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 22","termid":"PBO:0041979"}


id: PBO:0039900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF3 antisense RNA 1","termid":"PBO:0039900"}


id: GO:0021567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 1 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:curators","GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 development","termid":"GO:0021567"}


id: PBO:0067459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 584, pseudogene","termid":"PBO:0067459"}


id: GO:0035313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of an epidermal cell along or through a wound gap that contributes to the reestablishment of a continuous epidermis.","definition_xrefs":["PMID:15269788","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wound healing, spreading of cells","termid":"GO:0044319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}


id: MONDO:0015143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare movement disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare movement disorder (obsolete MONDO:0015143)","secondary_identifiers":["Orphanet:102003"],"synonyms":[{"name":"rare movement disorder","type":"exact"}],"termid":"MONDO:0015143","xrefs":{"Monarch":{"xref_id":"0015143"}}}


id: GO:0031908
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a glyoxysome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal matrix","termid":"GO:0005782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005777"],"is_obsolete":false,"name":"glyoxysomal lumen","termid":"GO:0031908"}


id: GO:0072690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of population growth during which single celled organisms reproduce by budding, fission, or other asexual methods.","definition_xrefs":["GOV:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-celled organism vegetative growth phase","secondary_identifiers":["GO:0062178"],"synonyms":[{"name":"stationary phase","type":"narrow"},{"name":"vegetative growth of a single-celled organism","type":"exact"}],"termid":"GO:0072690"}


id: PBO:0054336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1729","termid":"PBO:0054336"}


id: PBO:0078251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 26/OR9-2 (pseudogene)","termid":"PBO:0078251"}


id: MONDO:0013801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SCN8A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005066","MONDO:0004736","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 13","secondary_identifiers":["UMLS:C3281191","OMIM:614558","MEDGEN:482821","DOID:0080445","GARD:13085","SCTID:765170001"],"synonyms":[{"name":"DEE13","type":"exact"},{"name":"EIEE13","type":"exact"},{"name":"SCN8A early infantile epileptic encephalopathy","type":"exact"},{"name":"SCN8A encephalopathy","type":"related"},{"name":"SCN8A epilepsy","type":"related"},{"name":"developmental and epileptic encephalopathy 13","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SCN8A","type":"exact"},{"name":"early infantile epileptic encephalopathy-13","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 13","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 13","type":"exact"}],"termid":"MONDO:0013801","xrefs":{"Monarch":{"xref_id":"0013801"}}}


id: GO:0072328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkene binding","termid":"GO:0072328"}


id: MONDO:0003125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant tumor that arises from the testis. It is composed of granulosa cells, Leydig cells, Sertoli cells, and fibroblasts. Each of these cell types may constitute the only cellular component that is present in the tumor or it may be mixed with other cell types in various combinations. The prognosis can not always be predicted on histologic grounds alone. Approximately, ten percent of these tumors may metastasize. Representative examples include granulosa cell tumor, Leydig cell tumor, Sertoli cell tumor, and tumors of the thecoma-fibroma group.","definition_xrefs":["NCIT:C6358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular sex cord-stromal neoplasm","secondary_identifiers":["DOID:4757","SCTID:702406000","GARD:21551","MEDGEN:825921","Orphanet:363489","UMLS:C3840076"],"synonyms":[{"name":"sex cord-stromal neoplasm","type":"related"},{"name":"sex cord-stromal neoplasm of testis","type":"related"},{"name":"sex cord-stromal neoplasm of the testis","type":"related"},{"name":"sex cord-stromal tumor of testis","type":"exact"},{"name":"sex cord-stromal tumor of the testis","type":"related"},{"name":"sex cord-stromal tumour of testis","type":"exact"},{"name":"sex cord-stromal tumour of the testis","type":"related"},{"name":"testicular sex cord-stromal neoplasm","type":"exact"},{"name":"testicular sex cord-stromal tumor","type":"exact"},{"name":"testicular sex cord-stromal tumour","type":"exact"},{"name":"testis sex cord-stromal tumor","type":"exact"},{"name":"testis sex cord-stromal tumour","type":"exact"}],"termid":"MONDO:0003125","xrefs":{"Monarch":{"xref_id":"0003125"}}}


id: MONDO:0016737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ganglioneuroma (obsolete MONDO:0016737)","termid":"MONDO:0016737","xrefs":{"Monarch":{"xref_id":"0016737"}}}


id: MONDO:0003142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primitive neuroectodermal tumor that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"},{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intracranial primitive neuroectodermal tumor","secondary_identifiers":["DOID:4788","NCIT:C5817","UMLS:C1334246","MEDGEN:272770"],"synonyms":[{"name":"brain primitive neuroectodermal tumor","type":"exact"},{"name":"brain primitive neuroectodermal tumour","type":"exact"},{"name":"intracranial PNET","type":"exact"},{"name":"intracranial primitive neuroectodermal neoplasm","type":"exact"},{"name":"intracranial primitive neuroectodermal tumor","type":"exact"},{"name":"primitive neuroectodermal tumor of brain","type":"exact"},{"name":"primitive neuroectodermal tumour of brain","type":"exact"}],"termid":"MONDO:0003142","xrefs":{"Monarch":{"xref_id":"0003142"}}}


id: PBO:0082427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bisphosphate-3'-nucleotidase; involved in salt tolerance and methionine biogenesis; dephosphorylates 3'-phosphoadenosine-5'-phosphate and 3'-phosphoadenosine-5'-phosphosulfate, intermediates of the sulfate assimilation pathway; human homolog BPNT1 complements yeast null mutant","termid":"PBO:0082427"}


id: PBO:0046087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 12","termid":"PBO:0046087"}


id: GO:0009801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ester derivatives of cinnamic acid, phenylpropenoic acid.","definition_xrefs":["GOC:lr","GOC:yl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cinnamic acid ester metabolic process","synonyms":[{"name":"cinnamic acid ester metabolism","type":"exact"}],"termid":"GO:0009801"}


id: GO:1905095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apolipoprotein A-I-mediated signaling pathway.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","PMID:25084135","GOC:TermGenie","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of apolipoprotein A-I-mediated signaling pathway","termid":"GO:1905094"},{"relation_name":"negatively_regulates","term_name":"apolipoprotein A-I-mediated signaling pathway","termid":"GO:0038027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"down regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"down regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"down-regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"down-regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"downregulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"downregulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"inhibition of apolipoprotein A-I-mediated signaling pathway","type":"narrow"},{"name":"inhibition of apolipoprotein A-I-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:1905095"}


id: MONDO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pfeiffer rockelein syndrome","secondary_identifiers":["UMLS:C2931656","MESH:C537890","MEDGEN:419465"],"synonyms":[{"name":"asymmetrical coronal synostosis, cutaneous syndactyly of fingers and toes, and jejunal atresia","type":"related"}],"termid":"MONDO:0043172","xrefs":{"Monarch":{"xref_id":"0043172"}}}


id: PBO:0089956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh5","termid":"PBO:0089956"}


id: GO:0090659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism relating to the progression of that organism along the ground by the process of lifting and setting down each leg.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"walking behavior","synonyms":[{"name":"locomotor gait pattern","type":"narrow"}],"termid":"GO:0090659"}


id: FYECO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which MMS (methyl methanesulfonate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MMS","synonyms":[{"name":"methyl methanesulfonate added","type":"exact"}],"termid":"FYECO:0000211"}


id: PBO:0028302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitosis","termid":"PBO:0028302"}


id: GO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables the transport of a solute across a membrane via a gap junction hemi-channel. Two gap junction hemi-channels coupled together form a complete gap junction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"},{"relation_name":"part_of","term_name":"gap junction channel activity","termid":"GO:0005243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"part_of","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"part_of","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"gap junction hemi-channel activity","synonyms":[{"name":"connexon channel activity","type":"exact"}],"termid":"GO:0055077"}


id: SO:1000097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The deletion of one or more amino acids from the polypeptide, without affecting the surrounding sequence.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000097 sequence_variant_causing_amino_acid_deletion (obsolete SO:1000097)","synonyms":[{"name":"mutation causing amino acid deletion","type":"related"},{"name":"sequence variant causing amino acid deletion","type":"exact"}],"termid":"SO:1000097"}


id: MONDO:0011600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and prolonged opening and activity of the acetylcholine receptor channel that has material basis in heterozygous or rarely biallelic mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["DOID:0110678","PMID:25792100","PMID:7531341","PMID:12141316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4A","secondary_identifiers":["MEDGEN:908188","GARD:15387","OMIM:605809","UMLS:C4225413"],"synonyms":[{"name":"CMS Ia1","type":"exact"},{"name":"CMS1A1","type":"exact"},{"name":"CMS4A","type":"exact"},{"name":"Cms Ia1","type":"related"},{"name":"Cms Ia1, formerly","type":"related"},{"name":"congenital myasthenic syndrome 4A slow-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 4A","type":"exact"},{"name":"congenital myasthenic syndrome type Ia1","type":"related"},{"name":"congenital myasthenic syndrome type Ia1, formerly","type":"related"},{"name":"congenital myasthenic syndrometype Ia1","type":"exact"},{"name":"myasthenic syndrome, congenital, 4A, slow-channel","type":"related"}],"termid":"MONDO:0011600","xrefs":{"Monarch":{"xref_id":"0011600"}}}


id: PBO:0031822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_apoptosis","termid":"PBO:0031822"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0004672","GO:0016301","GO:0038023","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: PBO:0042247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 9","termid":"PBO:0042247"}


id: GO:0033487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pelargonidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["MetaCyc:PWY-5125","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelargonidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"pelargonidin 3-O-glucoside anabolism","type":"exact"},{"name":"pelargonidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"pelargonidin 3-O-glucoside formation","type":"exact"},{"name":"pelargonidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033487"}


id: PBO:0039751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 2","termid":"PBO:0039751"}


id: GO:0106037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane in the middle of the apical edge of a cell.","definition_xrefs":["PMID:23831726","PMID:28263180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical cortex","termid":"GO:0045179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"apicomedial cortex","synonyms":[{"name":"medioapical cortex","type":"exact"}],"termid":"GO:0106037"}


id: GO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanethiol + O2 + H2O = formaldehyde + hydrogen sulfide + hydrogen peroxide.","definition_xrefs":["EC:1.8.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methanethiol oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0209","RHEA:11812","MetaCyc:METHANETHIOL-OXIDASE-RXN"],"synonyms":[{"name":"(MM)-oxidase activity","type":"related"},{"name":"MT-oxidase activity","type":"related"},{"name":"methanethiol:oxygen oxidoreductase activity","type":"related"},{"name":"methyl mercaptan oxidase activity","type":"related"},{"name":"methylmercaptan oxidase activity","type":"related"}],"termid":"GO:0018549"}


id: MONDO:0019964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thymic endocrine tumor is a rare, malignant, primary thymic neoplasm originating from neuroendocrine cells, presenting as a mass within the anterior mediastinum. Patients typically present with nonspecific symptoms, such as chest pain, cough, shortness of breath, or in some cases, superior vena cava syndrome, although patients could be asymptomatic during the early stages or present with multiple endocrine neoplasia type I. Ectopic production of ACTH and serotonin can lead to Cushing syndrome and carcinoid sydrome, respectively.","definition_xrefs":["Orphanet:97289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymus neoplasm","termid":"MONDO:0005197"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymic neuroendocrine tumor","secondary_identifiers":["ONCOTREE:TNET","GARD:19361"],"synonyms":[{"name":"neuroendocrine neoplasm of thymus","type":"exact"},{"name":"thymus NET","type":"exact"},{"name":"thymus neuroendocrine neoplasm","type":"exact"},{"name":"thymus neuroendocrine tumor","type":"exact"},{"name":"thymus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"thymus neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0019964","xrefs":{"Monarch":{"xref_id":"0019964"}}}


id: FYPO:0005095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to chromatin at replication origin","synonyms":[{"name":"abolished protein localisation to chromatin at replication origin during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at replication origin during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005095"}


id: GO:0003725
data:
  {"annotated_genes":["SJAG_04410","SJAG_04527","SJAG_03897","SJAG_04369","SJAG_02156","SJAG_01643","SJAG_03689","SJAG_04700","SJAG_04019"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61305,64900,67532,76653,78277,107110,108296,109644,115802],"is_not":false,"summary":null,"term":"GO:0003725"}]},"cv_name":"molecular_function","definition":"Binding to double-stranded RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01643":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_03897":null,"SJAG_04019":null,"SJAG_04369":null,"SJAG_04410":null,"SJAG_04527":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"double-stranded RNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dsRNA binding","type":"exact"}],"termid":"GO:0003725","terms_by_termid":{"GO:0003725":null}}


id: PBO:0046966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83C antisense RNA 1","termid":"PBO:0046966"}


id: PBO:0065044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 2 pseudogene 1","termid":"PBO:0065044"}


id: GO:0046299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dichlorophenoxyacetic acid biosynthetic process (obsolete GO:0046299)","synonyms":[{"name":"2,4-dichlorophenoxyacetic acid anabolism","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid biosynthesis","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid biosynthetic process","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid formation","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid synthesis","type":"exact"}],"termid":"GO:0046299"}


id: PBO:0090008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2C catalytic subunit Ptc1","termid":"PBO:0090008"}


id: GO:1900961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 17-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"positively_regulates","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"activation of 17-methylnonadec-1-ene metabolic process","type":"narrow"},{"name":"activation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900961"}


id: FYPO:0004475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication is decreased. Initiation may be affected at one or more origins.","definition_xrefs":["PMID:22970243","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic DNA replication initiation","synonyms":[{"name":"decreased DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"decreased DNA replication initiation during vegetative growth","type":"exact"},{"name":"reduced mitotic DNA replication initiation","type":"exact"}],"termid":"FYPO:0004475"}


id: PBO:0065173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin receptor 1","termid":"PBO:0065173"}


id: PBO:0067121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 166, pseudogene","termid":"PBO:0067121"}


id: GO:0044820
data:
  {"annotated_genes":["SJAG_01263","SJAG_03092","SJAG_01067","SJAG_01777","SJAG_03048","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75829,89512,98913,104902,116677],"is_not":false,"summary":null,"term":"GO:0044820"},{"annotations":[102159],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904537"}]},"cv_name":"biological_process","definition":"The process in which a telomere is maintained in a specific location at the nuclear periphery, as part of a mitotic cell cycle.","definition_xrefs":["PMID:25778919","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere tethering at nuclear periphery","termid":"GO:0034398"},{"relation_name":"part_of","term_name":"mitotic telomere clustering and tethering at nuclear periphery","termid":"GO:0120109"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01263":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_03048":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044820","terms_by_termid":{"GO:0044820":null,"GO:1904537":null}}


id: PBO:0089238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP6 subunit Alp16","termid":"PBO:0089238"}


id: PBO:0036094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_mitotic_S_phase","termid":"PBO:0036094"}


id: PBO:0082976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic thioredoxin isoenzyme; part of the thioredoxin system that protects cells from oxidative and reductive stress; subunit of the LMA1 complex, with Pbi2p, that promotes vacuole inheritance; cofactor for Tsa1p; required for ER-Golgi transport; facilitates mitochondrial import of small Tims (Tim9p, Tim10p, Tim13p) by maintaining them in reduced form along with Trx2p; component of a signal transduction redox relay in a light sensing pathway; abundance increases under DNA replication stress","termid":"PBO:0082976"}


id: null:local:computer file
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"computer file","termid":"null:local:computer file"}


id: MONDO:0005289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the paranasal sinuses. Representative examples of benign neoplasms include Schneiderian papilloma and salivary gland-type adenoma. Representative examples of malignant neoplasms include carcinoma and lymphoma.","definition_xrefs":["NCIT:C7488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paranasal sinus neoplasm","secondary_identifiers":["HP:0030072","SCTID:126675008","MEDGEN:18296","UMLS:C0030470","EFO:0003866","DOID:1350"],"synonyms":[{"name":"accessory sinus neoplasm","type":"exact"},{"name":"accessory sinus tumor","type":"exact"},{"name":"accessory sinus tumour","type":"exact"},{"name":"neoplasm of accessory sinus","type":"exact"},{"name":"neoplasm of paranasal sinus","type":"exact"},{"name":"neoplasm of the accessory sinus","type":"exact"},{"name":"neoplasm of the paranasal sinus","type":"exact"},{"name":"paranasal sinus neoplasm","type":"exact"},{"name":"paranasal sinus neoplasm (disease)","type":"exact"},{"name":"paranasal sinus neoplasms","type":"exact"},{"name":"paranasal sinus tumor","type":"exact"},{"name":"paranasal sinus tumour","type":"exact"},{"name":"tumor of accessory sinus","type":"exact"},{"name":"tumor of paranasal sinus","type":"exact"},{"name":"tumor of the accessory sinus","type":"exact"},{"name":"tumor of the paranasal sinus","type":"exact"},{"name":"tumour of accessory sinus","type":"exact"},{"name":"tumour of paranasal sinus","type":"exact"},{"name":"tumour of the accessory sinus","type":"exact"},{"name":"tumour of the paranasal sinus","type":"exact"}],"termid":"MONDO:0005289","xrefs":{"Monarch":{"xref_id":"0005289"}}}


id: PBO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1 (predicted)","termid":"PBO:0000747"}


id: GO:0010066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the ground tissues.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground meristem histogenesis","termid":"GO:0010066"}


id: PBO:0080937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY2 transcription factor","termid":"PBO:0080937"}


id: GO:0010919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010919"}


id: PBO:0080947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 2","termid":"PBO:0080947"}


id: MOD:00380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["PubMed:14725769","PubMed:12910261","Unimod:424#D","RESID:AA0375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-aspartyl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"},{"name":"nitrate reductase A aspartyl Mo-bisMGD cofactor","type":"exact"},{"name":"phosphoric acid 4-(2-amino-4-oxo-3,4,5,6,-tetrahydro-pteridin-6-yl)-2-hydroxy-3,4-dimercapto-but-3-en-yl ester guanylate ester","type":"exact"}],"termid":"MOD:00380"}


id: PBO:0059333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 2","termid":"PBO:0059333"}


id: PBO:0055195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2620","termid":"PBO:0055195"}


id: PBO:0084145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity inorganic phosphate (Pi) transporter; also low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p; cells overexpressing Pho84p accumulate heavy metals but do not develop symptoms of metal toxicity","termid":"PBO:0084145"}


id: GO:0019303
data:
  {"annotated_genes":["SJAG_03174"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58348],"is_not":false,"summary":null,"term":"GO:0019303"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-ribose (ribo-pentose).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-ribose metabolic process","termid":"GO:0006014"},{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-ribose catabolic process","references_by_uniquename":{"GO_REF:0000041":null},"secondary_identifiers":["MetaCyc:RIBOKIN-PWY"],"synonyms":[{"name":"D-ribose breakdown","type":"exact"},{"name":"D-ribose catabolism","type":"exact"},{"name":"D-ribose degradation","type":"exact"}],"termid":"GO:0019303","terms_by_termid":{"GO:0019303":null}}


id: MONDO:0013214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bile acid malabsorption, primary, 1","secondary_identifiers":["OMIM:613291","MESH:C567652","MEDGEN:1794144","Orphanet:449262","UMLS:C5561934"],"synonyms":[{"name":"Bile acid malabsorption, primary, 1","type":"exact"},{"name":"PBAM","type":"related"},{"name":"bile acid malabsorption, primary","type":"exact"}],"termid":"MONDO:0013214","xrefs":{"Monarch":{"xref_id":"0013214"}}}


id: PBO:0079156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 15","termid":"PBO:0079156"}


id: PBO:0031428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glycerol_dehydrogenase_activity","termid":"PBO:0031428"}


id: GO:0022874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + cellobiose(out) = protein histidine + cellobiose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"cellobiose transmembrane transporter activity","termid":"GO:0019191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0016740","GO:0003674","GO:0003824","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-cellobiose phosphotransferase system transporter activity","synonyms":[{"name":"cellobiose PTS transporter activity","type":"exact"}],"termid":"GO:0022874"}


id: PATO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001096 absolute force value (obsolete PATO:0001096)","termid":"PATO:0001096"}


id: PBO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 8","termid":"PBO:0046835"}


id: MONDO:0016130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fungal myositis","secondary_identifiers":["GARD:20380","Orphanet:207000","SCTID:240111007","UMLS:C0410251","icd11.foundation:1054267564","MEDGEN:592951"],"termid":"MONDO:0016130","xrefs":{"Monarch":{"xref_id":"0016130"}}}


id: GO:0006334
data:
  {"annotated_genes":["SJAG_02198","SJAG_00336","SJAG_00942","SJAG_02314","SJAG_02906","SJAG_00303","SJAG_04272","SJAG_04257","SJAG_03542"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69520,72627,72877,78521,90869,90871,96210,107532,114347],"is_not":false,"summary":null,"term":"GO:0006334"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome organization","termid":"GO:0034728"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00303":null,"SJAG_00336":null,"SJAG_00942":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02906":null,"SJAG_03542":null,"SJAG_04257":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006325","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"nucleosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-774815"],"synonyms":[{"name":"histone chaperone","type":"related"},{"name":"nucleosome modeling","type":"exact"}],"termid":"GO:0006334","terms_by_termid":{"GO:0006334":null}}


id: MONDO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent or recurrent inability to achieve or to maintain an erection during sexual activity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile disorder","termid":"MONDO:0002036"},{"relation_name":"is_a","term_name":"physiological sexual disorder","termid":"MONDO:0002134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erectile dysfunction","secondary_identifiers":["HP:0000802","DOID:1875","MEDGEN:66879","NCIT:C34801","EFO:0004234","SCTID:397803000","MESH:D007172","UMLS:C0242350"],"synonyms":[{"name":"dysfunction, erectile","type":"related"},{"name":"erectile dysfunction","type":"exact"},{"name":"erectile dysfunction (disease)","type":"exact"},{"name":"impotence","type":"related"},{"name":"impotence, male","type":"related"},{"name":"impotence, male sexual","type":"related"},{"name":"male erectile Disorder","type":"exact"},{"name":"male impotence","type":"related"},{"name":"male sexual impotence","type":"related"},{"name":"sexual impotence","type":"exact"},{"name":"sexual impotence (finding)","type":"exact"},{"name":"sexual impotence, Male","type":"related"}],"termid":"MONDO:0005362","xrefs":{"Monarch":{"xref_id":"0005362"}}}


id: FYPO:0000336
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119188],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[119174,118956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119052],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119020,119122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119189],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component assembly at the cellular level is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":6,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_04522","SJAG_01143","SJAG_04280"],"name":"abnormal cellular component assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_02592","SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","rga4delta","pom1delta","sty1delta"],"synonyms":[{"name":"abnormal cellular component assembly at cellular level","type":"exact"}],"termid":"FYPO:0000336","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Asl1, predicted O-glucosyl hydrolase","termid":"PBO:0000192"}


id: PBO:0017736
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae LYS2","termid":"PBO:0017736"}


id: GO:0004784
data:
  {"annotated_genes":["SJAG_04788","SJAG_01734","SJAG_03303","SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57877,64772,74020,76860],"is_not":false,"summary":null,"term":"GO:0004784"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide.","definition_xrefs":["PMID:15064408","GOC:vw","EC:1.15.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on superoxide radicals as acceptor","termid":"GO:0016721"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_04788":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"superoxide dismutase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0016954","Reactome:R-HSA-1222462","Reactome:R-HSA-3299680","Reactome:R-HSA-3299691","Reactome:R-HSA-3299682","RHEA:20696","Reactome:R-HSA-1222469","Reactome:R-HSA-3777112","GO:0008382","GO:0004785","GO:0008383","MetaCyc:SUPEROX-DISMUT-RXN"],"synonyms":[{"name":"Cu,Zn-SOD","type":"related"},{"name":"Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"Fe-SOD","type":"related"},{"name":"Mn, Fe superoxide dismutase","type":"narrow"},{"name":"Mn-SOD","type":"related"},{"name":"SOD","type":"related"},{"name":"SOD-1","type":"related"},{"name":"SOD-2","type":"related"},{"name":"SOD-3","type":"related"},{"name":"SOD-4","type":"related"},{"name":"SODF","type":"related"},{"name":"SODS","type":"related"},{"name":"copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"cuprein","type":"related"},{"name":"cytocuprein","type":"related"},{"name":"erythrocuprein","type":"related"},{"name":"ferrisuperoxide dismutase activity","type":"narrow"},{"name":"hemocuprein","type":"related"},{"name":"hepatocuprein","type":"related"},{"name":"iron superoxide dismutase activity","type":"narrow"},{"name":"iron superoxide oxidoreductase","type":"related"},{"name":"manganese superoxide dismutase activity","type":"narrow"},{"name":"manganese superoxide oxidoreductase","type":"related"},{"name":"nickel superoxide dismutase activity","type":"narrow"},{"name":"nickel superoxide oxidoreductase","type":"related"},{"name":"superoxide dismutase I","type":"related"},{"name":"superoxide dismutase II","type":"related"},{"name":"superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"zinc superoxide oxidoreductase","type":"related"}],"termid":"GO:0004784","terms_by_termid":{"GO:0004784":null}}


id: MONDO:0013377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated microphthalmia in which the cause of the disease is a mutation in the GDF3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 7","secondary_identifiers":["UMLS:C3150969","DOID:0060838","MEDGEN:462319","OMIM:613704"],"synonyms":[{"name":"GDF3 isolated microphthalmia","type":"exact"},{"name":"MCOP7","type":"exact"},{"name":"isolated microphthalmia caused by mutation in GDF3","type":"exact"},{"name":"isolated microphthalmia type 7","type":"exact"},{"name":"microphthalmia, isolated 7","type":"related"},{"name":"microphthalmia, isolated type 7","type":"exact"}],"termid":"MONDO:0013377","xrefs":{"Monarch":{"xref_id":"0013377"}}}


id: GO:1902463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cell leading edge.","definition_xrefs":["PMID:21543326","GOC:lb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell leading edge","synonyms":[{"name":"protein localisation in cell leading edge","type":"exact"},{"name":"protein localisation to cell leading edge","type":"exact"},{"name":"protein localization in cell leading edge","type":"exact"}],"termid":"GO:1902463"}


id: GO:0009109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of coenzymes, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme catabolic process (obsolete GO:0009109)","synonyms":[{"name":"coenzyme and prosthetic group catabolic process","type":"broad"},{"name":"coenzyme and prosthetic group catabolism","type":"broad"},{"name":"coenzyme breakdown","type":"exact"},{"name":"coenzyme catabolism","type":"exact"},{"name":"coenzyme degradation","type":"exact"}],"termid":"GO:0009109"}


id: GO:0048107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-amino-3-isothiazolinone, five-membered saturated heterocyclic ring structures containing a sulfur and a nitrogen in the 1-position and 2-positions respectively.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"4-amino-3-isothiazolidinone biosynthetic process","synonyms":[{"name":"4-amino-3-isothiazolidinone anabolism","type":"exact"},{"name":"4-amino-3-isothiazolidinone biosynthesis","type":"exact"},{"name":"4-amino-3-isothiazolidinone formation","type":"exact"},{"name":"4-amino-3-isothiazolidinone synthesis","type":"exact"}],"termid":"GO:0048107"}


id: PBO:0046476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 1, endonuclease non-catalytic subunit","termid":"PBO:0046476"}


id: MONDO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare circumscribed, non-encapsulated and grossly pigmented nerve sheath tumor. It is composed of cells with the immunophenotypic and electron microscopic features of Schwann cells which contain melanosomes and are positive for melanoma markers. It usually involves spinal nerve roots but may occur in other locations. It may be associated with PRKAR1A gene mutation and Carney complex. Malignant behavior has been reported in a significant number of patients.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic neurilemmoma","secondary_identifiers":["ONCOTREE:MSCHW","MEDGEN:266292","NCIT:C6970","DOID:3205","ICD9:215.8","SCTID:404024000","UMLS:C1306247"],"synonyms":[{"name":"MSCHW","type":"related"},{"name":"melanocytic neurilemmoma","type":"exact"},{"name":"melanocytic schwannoma","type":"exact"},{"name":"melanotic neurinoma","type":"exact"},{"name":"melanotic schwannoma","type":"exact"},{"name":"melanotic schwannoma (morphologic abnormality)","type":"exact"},{"name":"pigmented neurilemmoma","type":"exact"},{"name":"pigmented schwannoma","type":"exact"}],"termid":"MONDO:0002558","xrefs":{"Monarch":{"xref_id":"0002558"}}}


id: PBO:0085673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in phospholipid flippase function; null allele suppresses growth and membrane trafficking defects associated with all flippase null alleles; proposed function as a phospholipid scramblase that reduces membrane asymmetry; PQ loop family member; localizes to the endosome and trans-Golgi network; non-essential gene","termid":"PBO:0085673"}


id: PBO:0031184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division","termid":"PBO:0031184"}


id: GO:0042648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circular DNA molecule containing chloroplast encoded genes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid chromosome","termid":"GO:0009508"},{"relation_name":"part_of","term_name":"chloroplast nucleoid","termid":"GO:0042644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005737"],"is_obsolete":false,"name":"chloroplast chromosome","termid":"GO:0042648"}


id: MONDO:0015151
data:
  {"annotated_genes":["SJAG_04228","SJAG_03470"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[85545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"}]},"cv_name":"mondo","definition":"Autosomal dominant form of limb-girdle muscular dystrophy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"limb-girdle muscular dystrophy","termid":"MONDO:0016971"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03470":null,"SJAG_04228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5675009","MEDGEN:1826162","icd11.foundation:537908479","DOID:0110273","OMIMPS:603511","GARD:19824","Orphanet:102014"],"synonyms":[{"name":"autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy, autosomal dominant","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal dominant","type":"exact"}],"termid":"MONDO:0015151","terms_by_termid":{"MONDO:0012034":null,"MONDO:0021018":null},"xrefs":{"Monarch":{"xref_id":"0015151"}}}


id: GO:0004484
data:
  {"annotated_genes":["SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75287],"is_not":false,"summary":null,"term":"GO:0004484"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + (5')pp-Pur-mRNA = diphosphate + G(5')ppp-Pur-mRNA; G(5')ppp-Pur-mRNA is mRNA containing a guanosine residue linked 5' through three phosphates to the 5' position of the terminal residue.","definition_xrefs":["EC:2.7.7.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA guanylyltransferase activity","termid":"GO:0008192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140098","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"mRNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:MRNA-GUANYLYLTRANSFERASE-RXN","Reactome:R-HSA-77081","Reactome:R-HSA-77083","Reactome:R-HSA-9815529","RHEA:54592"],"synonyms":[{"name":"GTP--RNA guanylyltransferase activity","type":"related"},{"name":"GTP:mRNA guanylyltransferase activity","type":"exact"},{"name":"mRNA capping enzyme activity","type":"related"},{"name":"messenger RNA guanylyltransferase activity","type":"related"},{"name":"protein lambda2","type":"related"}],"termid":"GO:0004484","terms_by_termid":{"GO:0004484":null}}


id: PR:Q9P3U6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght1 gene.","definition_xrefs":["UniProtKB:Q9P3U6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.07c","synonyms":[{"name":"Spom972h-ght1","type":"exact"},{"name":"hexose transporter 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U6"}


id: MONDO:0008305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Currarino syndrome (CS) is a rare congenital disease characterized by the triad of anorectal malformations (ARMs) (usually anal stenosis), presacral mass (commonly anterior sacral meningocele (ASM) or teratoma) and sacral anomalies (i.e. total or partial agenesis of the sacrum and coccyx or deformity of the sacral vertebrae).","definition_xrefs":["Orphanet:1552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Currarino triad","secondary_identifiers":["icd11.foundation:1532133816","MEDGEN:323460","OMIM:176450","UMLS:C1531773","DOID:0111546","GARD:1626","MESH:C536221","SCTID:413936007","ICD9:759.89"],"synonyms":[{"name":"CURRARINO syndrome","type":"related"},{"name":"Currarino syndrome","type":"exact"},{"name":"Currarino triad","type":"exact"},{"name":"Scra1","type":"related"},{"name":"partial sacral agenesis with intact first sacral vertebra, presacral mass and anorectal malformation","type":"related"},{"name":"sacral agenesis syndrome","type":"related"},{"name":"sacral agenesis, hereditary, with presacral Mass, anterior meningocele, and/or teratoma, and anorectal malformation","type":"related"}],"termid":"MONDO:0008305","xrefs":{"Monarch":{"xref_id":"0008305"}}}


id: MONDO:0019280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive hair growth anywhere on the body.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrichosis","secondary_identifiers":["Orphanet:79365","UMLS:C0020555","MESH:D006983","MedDRA:10020864","HP:0000998","icd11.foundation:2042627850","MEDGEN:43787","GARD:18996","DOID:420","SCTID:29966009"],"synonyms":[{"name":"hypertrichosis","type":"exact"},{"name":"hypertrichosis (disease)","type":"exact"}],"termid":"MONDO:0019280","xrefs":{"Monarch":{"xref_id":"0019280"}}}


id: FYPO:0001407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0001985","FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth on glucose carbon source","secondary_identifiers":["FYPO:0001161","FYPO:0001163"],"synonyms":[{"name":"decreased aerobic cell population growth on glucose carbon source","type":"narrow"},{"name":"decreased growth on glucose carbon source","type":"broad"},{"name":"decreased hypoxic cell population growth on glucose carbon source","type":"narrow"},{"name":"decreased vegetative cell growth on glucose carbon source","type":"exact"},{"name":"reduced cell growth on glucose carbon source","type":"exact"},{"name":"slow cell growth on glucose carbon source","type":"narrow"}],"termid":"FYPO:0001407"}


id: PBO:0090705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) residue 32 (cytosine-3-)-methyltransferase Trm141","termid":"PBO:0090705"}


id: GO:1902995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid efflux.","definition_xrefs":["GOC:TermGenie","GOC:sjp","PMID:12042316","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid efflux","termid":"GO:1902994"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid efflux","termid":"GO:0033700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid efflux","synonyms":[{"name":"activation of phospholipid efflux","type":"narrow"},{"name":"activation of phospholipid export","type":"narrow"},{"name":"positive regulation of phospholipid export","type":"exact"},{"name":"up regulation of phospholipid efflux","type":"exact"},{"name":"up regulation of phospholipid export","type":"exact"},{"name":"up-regulation of phospholipid efflux","type":"exact"},{"name":"up-regulation of phospholipid export","type":"exact"},{"name":"upregulation of phospholipid efflux","type":"exact"},{"name":"upregulation of phospholipid export","type":"exact"}],"termid":"GO:1902995"}


id: PBO:0040178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginase","termid":"PBO:0040178"}


id: PBO:0080573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing planar cell polarity effector","termid":"PBO:0080573"}


id: PBO:0075292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 31","termid":"PBO:0075292"}


id: PBO:0090278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp4","termid":"PBO:0090278"}


id: PBO:0045361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 1","termid":"PBO:0045361"}


id: GO:0050998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nitric-oxide synthase binding","synonyms":[{"name":"NOS binding","type":"exact"}],"termid":"GO:0050998"}


id: PBO:0059517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1","termid":"PBO:0059517"}


id: PBO:0063829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohistidine phosphatase 1","termid":"PBO:0063829"}


id: MONDO:0007257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"candidiasis, familial, 1","secondary_identifiers":["OMIM:114580","UMLS:C2751429","MESH:C567779","MEDGEN:414015"],"synonyms":[{"name":"CANDF1","type":"exact"},{"name":"Cmct","type":"related"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal dominant, with or without thyroid disease","type":"related"},{"name":"candidiasis, familial, 1","type":"exact"},{"name":"candidiasis, familial, 1, autosomal dominant","type":"exact"}],"termid":"MONDO:0007257","xrefs":{"Monarch":{"xref_id":"0007257"}}}


id: PBO:0044194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin C","termid":"PBO:0044194"}


id: PBO:0116789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CERK like autophagy regulator","termid":"PBO:0116789"}


id: PBO:0027945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_fragmented_septum_and_more_than_four_nuclei","termid":"PBO:0027945"}


id: MONDO:0018827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Chilblain lupus that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"chilblain lupus","termid":"MONDO:0019557"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"familial chilblain lupus","secondary_identifiers":["OMIMPS:610448","Orphanet:481662","UMLS:C5688224","GARD:17874","MEDGEN:1807766"],"synonyms":[{"name":"hereditary Chilblain lupus","type":"exact"},{"name":"hereditary chilblain lupus","type":"exact"}],"termid":"MONDO:0018827","xrefs":{"Monarch":{"xref_id":"0018827"}}}


id: PBO:0045021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRAS family GTPase 1","termid":"PBO:0045021"}


id: GO:0019563
data:
  {"annotated_genes":["SJAG_04320","SJAG_04192","SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71674,78405],"is_not":false,"summary":null,"term":"GO:0019563"},{"annotations":[88352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[88353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol metabolic process","termid":"GO:0006071"},{"relation_name":"is_a","term_name":"alditol catabolic process","termid":"GO:0019405"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glycerol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYCEROL-DEG"],"synonyms":[{"name":"glycerol breakdown","type":"exact"},{"name":"glycerol catabolism","type":"exact"},{"name":"glycerol degradation","type":"exact"}],"termid":"GO:0019563","terms_by_termid":{"GO:0019563":null,"GO:0019564":null,"GO:0061613":null}}


id: PBO:0085791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; associates with ribosomes and has a putative RNA binding domain; interacts with Tma20p; similar to human GRAP and human DRP1, which interacts with human Tma20p homolog MCT-1; protein abundance increases in response to DNA replication stress","termid":"PBO:0085791"}


id: MONDO:0020675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease of the large or small intestine that is caused by inadequate blood supply.","definition_xrefs":["NCIT:C35212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ischemic bowel disorder","secondary_identifiers":["MEDGEN:412148","UMLS:C2004435"],"synonyms":[{"name":"ischaemic bowel disease","type":"exact"},{"name":"ischemic bowel disease","type":"exact"}],"termid":"MONDO:0020675","xrefs":{"Monarch":{"xref_id":"0020675"}}}


id: GO:1990940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of one microtubule along another microtubule involved in mitotic spindle elongation.","definition_xrefs":["PMID:19686686"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule sliding involved in mitotic spindle elongation (obsolete GO:1990940)","termid":"GO:1990940"}


id: PBO:0109135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHOX homeobox","termid":"PBO:0109135"}


id: GO:0004950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a chemokine, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Chemokines are a family of small chemotactic cytokines; their name is derived from their ability to induce directed chemotaxis in nearby responsive cells. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["GOC:rl","IUPHAR_GPCR:1280","GOC:BHF","PMID:12183377","Wikipedia:Chemokine","PMID:8662823","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled chemoattractant receptor activity","termid":"GO:0001637"},{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"chemokine receptor activity","termid":"GO:0004950"}


id: PR:G2TRM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmc1 gene.","definition_xrefs":["UniProtKB:G2TRM0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase assembly factor fmc1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.11","synonyms":[{"name":"Spom972h-fmc1","type":"exact"},{"name":"formation of mitochondrial complexes protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRM0"}


id: PBO:0082273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AN1-type zinc finger protein, effector of proteotoxic stress response; stress-inducible transcriptional target of Rpn4p; induced by nitrogen limitation, weak acid, misfolded proteins; short-lived protein, degraded by proteasome; may protect cells from trivalent metalloid induced proteotoxicity; contains PACE promoter element; ortholog of human AIRAP, which stimulates proteasome activity in response to arsenic; protein abundance increases under DNA replication stress","termid":"PBO:0082273"}


id: MONDO:0008703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessively inherited form of acromesomelic dysplasia characterized by severe dwarfism at birth, abnormalities confined to limbs, severe shortening and deformity of long bones, fusion or absence of carpal and tarsal bones, ball shaped fingers and, occasionally, polydactyly and absent joints. As seen in acromesomelic dysplasia, Hunter-Thomson type and acromesomelic dysplasia, Maroteaux Type, facial features and intelligence are normal.","definition_xrefs":["Orphanet:2098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondrogenesis","termid":"MONDO:0019648"},{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia 2A","secondary_identifiers":["DOID:0080052","UMLS:C0265260","NCIT:C3816","GARD:1300","MEDGEN:75557","OMIM:200700","NANDO:2201346","NANDO:2201345"],"synonyms":[{"name":"AMDG","type":"related"},{"name":"Brazilian achondrogenesis","type":"related"},{"name":"GREBE chondrodysplasia","type":"exact"},{"name":"Grebe chondrodysplasia","type":"exact"},{"name":"Grebe dysplasia","type":"exact"},{"name":"Grebe syndrome","type":"related"},{"name":"Langer-Saldino achondrogenesis","type":"exact"},{"name":"achondrogenesis type II (formerly)","type":"related"},{"name":"achondrogenesis, Brazilian","type":"related"},{"name":"achondrogenesis, type II","type":"related"},{"name":"achondrogenesis, type II, formerly","type":"related"},{"name":"acromesomelic dysplasia 2A","type":"exact"},{"name":"acromesomelic dysplasia, Grebe type","type":"exact"},{"name":"chondrodysplasia, Grebe type","type":"exact"},{"name":"hypochondrogenesis","type":"related"},{"name":"type II achondrogenesis","type":"exact"}],"termid":"MONDO:0008703","xrefs":{"Monarch":{"xref_id":"0008703"}}}


id: GO:0017161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-myo-inositol 1,3,4-trisphosphate + H2O = myo-inositol 1,3-bisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 4-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855180","RHEA:43392"],"termid":"GO:0017161"}


id: MONDO:0004585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An excess quantity of amniotic fluid in the amniotic sac as compared to normal values. Typically associated with an amniotic fluid index (AFI) of greater than or equal to 25 cm or a single maximum vertical pocket (MVP) of greater than 8 cm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"placenta disorder","termid":"MONDO:0005917"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhydramnios","secondary_identifiers":["MEDGEN:6936","HP:0001561","ICD9:657.00","SCTID:86203003","ICD9:657.0","DOID:8488","MESH:D006831","UMLS:C0020224","ICD9:657"],"synonyms":[{"name":"polyhydramnios","type":"exact"},{"name":"polyhydramnios (disease)","type":"exact"}],"termid":"MONDO:0004585","xrefs":{"Monarch":{"xref_id":"0004585"}}}


id: PR:O94515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit zeta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02648","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit zeta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.11","secondary_identifiers":["UniProtKB:O94515"],"synonyms":[{"name":"CCT-zeta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT6A","type":"exact"},{"name":"TCP-1-zeta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94515"}


id: PBO:0031437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_plasmid_loss","termid":"PBO:0031437"}


id: MONDO:0011429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile idiopathic arthritis (JIA) is the term used to describe a group of inflammatory articular disorders of unknown cause that begin before the age of 16 and last over 6 weeks. The term juvenile idiopathic arthritis was chosen to signify the absence of any known mechanism underlying the disorder and to highlight the necessity of excluding other types of arthritis occurring in well defined diseases (in particular arthritis occurring in association with infectious, inflammatory and haematooncologic diseases).","definition_xrefs":["Orphanet:92"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary interstitial lung disease specific to childhood associated with a connective tissue disease (obsolete MONDO:0017021)","termid":"MONDO:0017021"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile idiopathic arthritis","secondary_identifiers":["NCIT:C26979","icd11.foundation:1322678686","NANDO:1200469","EFO:0002609","MedDRA:10059177","ICD9:714.32","MEDGEN:760659","OMIM:604302","SCTID:74391003","GARD:18677","DOID:676","NANDO:2200415","MESH:D001171","NCIT:C114357","ICD9:714.3","NORD:808","ICD9:714.31","SCTID:410502007","ICD10CM:M08.4","ICD9:714.33","UMLS:C3495559"],"synonyms":[{"name":"Arthritis, Juvenile Rheumatoid","type":"exact"},{"name":"JIA","type":"exact"},{"name":"Juvenile idiopathic arthritis","type":"exact"},{"name":"acute juvenile rheumatoid arthritis","type":"narrow"},{"name":"juvenile chronic arthritis","type":"related"},{"name":"juvenile chronic polyarthritis","type":"related"},{"name":"juvenile idiopathic arthritis","type":"exact"},{"name":"juvenile rheumatoid arthritis","type":"exact"},{"name":"monarticular juvenile rheumatoid arthritis","type":"narrow"},{"name":"pauciarticular juvenile arthritis","type":"narrow"},{"name":"pauciarticular onset juvenile chronic arthritis","type":"narrow"},{"name":"rheumatoid arthritis, systemic juvenile","type":"related"},{"name":"rheumatoid arthritis, systemic juvenile, susceptibility to","type":"exact"},{"name":"systemic juvenile rheumatoid arthritis","type":"narrow"}],"termid":"MONDO:0011429","xrefs":{"Monarch":{"xref_id":"0011429"}}}


id: PBO:0048175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase catalytic subunit 2","termid":"PBO:0048175"}


id: GO:0048339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm development","termid":"GO:0007498"},{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesoderm development","termid":"GO:0048339"}


id: PBO:0071150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 14","termid":"PBO:0071150"}


id: GO:0072522
data:
  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chemical reactions and pathways resulting in the formation of a purine-containing compound, i.e. any compound that contains purine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic 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compound biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine and derivative biosynthetic process","type":"exact"},{"name":"purine-containing compound anabolism","type":"exact"},{"name":"purine-containing compound biosynthesis","type":"exact"},{"name":"purine-containing compound formation","type":"exact"},{"name":"purine-containing compound synthesis","type":"exact"}],"termid":"GO:0072522","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006164":null,"GO:0006166":null,"GO:0006168":null,"GO:0006169":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006190":null,"GO:0006741":null,"GO:0009113":null,"GO:0009435":null,"GO:0010510":null,"GO:0015937":null,"GO:0015986":null,"GO:0019427":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0034356":null,"GO:0035338":null,"GO:0042776":null,"GO:0044208":null,"GO:0044209":null,"GO:0046084":null,"GO:0046086":null,"GO:1905706":null,"GO:1990181":null,"GO:2001295":null}}


id: PATO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001084 relative acceleration value (obsolete PATO:0001084)","termid":"PATO:0001084"}


id: PBO:0039027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 3","termid":"PBO:0039027"}


id: PBO:0050369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 72","termid":"PBO:0050369"}


id: PBO:0111823
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0111823"}


id: GO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one relatively unspecialized immature cystocyte of the germ-line cyst in the germarium acquires the specialized features of an oocyte. An example of this process can be found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte differentiation","termid":"GO:0009994"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived oocyte differentiation","synonyms":[{"name":"oocyte cell differentiation","type":"related"}],"termid":"GO:0030706"}


id: MONDO:0056817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An unusual rectal carcinoma characterized by the presence of glandular and squamous carcinomatous components. The two carcinomatous components may be admixed within the tumor, or the two may appear separately in different areas.","definition_xrefs":["NCIT:C43594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal adenosquamous carcinoma","termid":"MONDO:0006157"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of rectum","termid":"MONDO:0018515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectal adenosquamous carcinoma","secondary_identifiers":["MEDGEN:313658","UMLS:C1709865"],"synonyms":[{"name":"rectal adenosquamous cancer","type":"exact"},{"name":"rectal adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0056817","xrefs":{"Monarch":{"xref_id":"0056817"}}}


id: FYPO:0004209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which H3-K4 specific histone methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K4 specific)","termid":"FYPO:0004208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abolished histone methyltransferase activity (H3-K4 specific)","synonyms":[{"name":"histone methyltransferase activity (H3-K4 specific) abolished","type":"exact"}],"termid":"FYPO:0004209"}


id: GO:1903422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GOC:PARL","GOC:pad","PMID:22745285","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle recycling","synonyms":[{"name":"down regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of synaptic vesicle recycling","type":"exact"},{"name":"down-regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of synaptic vesicle recycling","type":"exact"},{"name":"downregulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of synaptic vesicle recycling","type":"exact"},{"name":"inhibition of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:1903422"}


id: GO:0047102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + 2-aminomuconate semialdehyde = NADH + 2-amino-muconate.","definition_xrefs":["MetaCyc:1.2.1.32-RXN","EC:1.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aminomuconate-semialdehyde dehydrogenase activity","secondary_identifiers":["RHEA:14469","UM-BBD_reactionID:r1434","Reactome:R-HSA-71239"],"synonyms":[{"name":"2-aminomuconate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-aminomuconate-6-semialdehyde:NAD+ 6-oxidoreductase activity","type":"related"},{"name":"2-hydroxymuconate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-hydroxymuconic acid semialdehyde dehydrogenase activity","type":"related"},{"name":"2-hydroxymuconic semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-aminomuconic epsilon-semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-hydroxymuconic epsilon-semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047102"}


id: MONDO:0010349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the BMP15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 2","secondary_identifiers":["DOID:0080861","MEDGEN:336903","DOID:0080494","MESH:C564499","OMIM:300510","GARD:18040","UMLS:C1845294"],"synonyms":[{"name":"BMP15 primary ovarian failure","type":"exact"},{"name":"ODG2","type":"related"},{"name":"ovarian dysgenesis 2","type":"exact"},{"name":"ovarian dysgenesis type 2","type":"exact"},{"name":"ovarian dysgenesis, hypergonadotropic, X-linked","type":"related"},{"name":"ovarian failure, hypergonadotropic, due to ovarian dysgenesis","type":"related"},{"name":"premature ovarian failure 4","type":"related"},{"name":"primary ovarian failure caused by mutation in BMP15","type":"exact"}],"termid":"MONDO:0010349","xrefs":{"Monarch":{"xref_id":"0010349"}}}


id: FYPO:0002188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a normal volume and spheroid shape. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, normal volume spheroid cells (obsolete FYPO:0002188)","synonyms":[{"name":"inviable microcolony, normal volume rounded cells","type":"exact"},{"name":"inviable microcolony, normal volume spheroid vegetative cells","type":"exact"}],"termid":"FYPO:0002188"}


id: GO:0034921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-4,5-dihydroxy-4,5-dihydropyrene = 4,5-dihydroxypyrene + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-4,5-dihydroxy-4,5-dihydropyrene dehydrogenase activity (obsolete GO:0034921)","termid":"GO:0034921"}


id: GO:0043939
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"sporulation","termid":"GO:0043934"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporulation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043939","terms_by_termid":{"GO:0075297":null}}


id: MONDO:1011197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited rickets in sheep due to a mutation in the DMP1 gene.","definition_xrefs":["OMIA:001542-9940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited rickets, DMP1-related, sheep","synonyms":[{"name":"hypophosphatemic rickets, autosomal recessive, 1, sheep","type":"related"}],"termid":"MONDO:1011197","xrefs":{"Monarch":{"xref_id":"1011197"}}}


id: GO:0009388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete antisense RNA (obsolete GO:0009388)","synonyms":[{"name":"antisense RNA","type":"exact"}],"termid":"GO:0009388"}


id: GO:1905409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of creatine transmembrane transporter activity.","definition_xrefs":["GO_REF:0000059","GOC:bc","GOC:TermGenie","GOC:PARL","PMID:25531585"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of creatine transmembrane transporter activity (obsolete GO:1905409)","synonyms":[{"name":"activation of creatine transmembrane transporter activity","type":"narrow"},{"name":"up regulation of creatine transmembrane transporter activity","type":"exact"},{"name":"up-regulation of creatine transmembrane transporter activity","type":"exact"},{"name":"upregulation of creatine transmembrane transporter activity","type":"exact"}],"termid":"GO:1905409"}


id: GO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase IV specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase IV activity (obsolete GO:0001057)","synonyms":[{"name":"DNA-directed RNA polymerase activity involved in transcription from RNA polymerase IV promoter","type":"exact"}],"termid":"GO:0001057"}


id: PBO:0084115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-like protein encoded within the telomeric Y' element","termid":"PBO:0084115"}


id: PBO:0062366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 1 pseudogene","termid":"PBO:0062366"}


id: MONDO:0015090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of pure hereditary spastic paraplegia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive pure spastic paraplegia (obsolete MONDO:0015090)","secondary_identifiers":["Orphanet:100982"],"synonyms":[{"name":"autosomal recessive pure HSP","type":"exact"},{"name":"autosomal recessive pure SPG","type":"exact"},{"name":"autosomal recessive pure hereditary spastic paraplegia","type":"exact"},{"name":"autosomal recessive uncomplicated HSP","type":"exact"},{"name":"autosomal recessive uncomplicated SPG","type":"exact"},{"name":"autosomal recessive uncomplicated spastic paraplegia","type":"exact"},{"name":"pure hereditary spastic paraplegia, autosomal recessive","type":"exact"}],"termid":"MONDO:0015090","xrefs":{"Monarch":{"xref_id":"0015090"}}}


id: MONDO:1011014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alexander disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alexander disease, non-human animal","termid":"MONDO:1010242"},{"relation_name":"is_a","term_name":"leukodystrophy, dog","termid":"MONDO:1011005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alexander disease, dog","secondary_identifiers":["OMIA:001208-9615"],"termid":"MONDO:1011014","xrefs":{"Monarch":{"xref_id":"1011014"}}}


id: GO:0018580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + O2 = acetaldehyde + nitrite.","definition_xrefs":["RHEA:28767","EC:1.13.12.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitronate monooxygenase activity","secondary_identifiers":["MetaCyc:2-NITROPROPANE-DIOXYGENASE-RXN"],"synonyms":[{"name":"2-nitropropane dioxygenase activity","type":"related"},{"name":"nitronate:oxygen 2-oxidoreductase (nitrite-forming) activity","type":"exact"}],"termid":"GO:0018580"}


id: MONDO:0018865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Striate palmoplantar keratoderma is an isolated, focal, hereditary palmoplantar keratoderma characterized by linear hyperkeratosis along the flexor aspect of the fingers and on palms, as well as focal hyperkeratosis of the plantar skin. Patients present with painful thickening of the skin on palms and soles, with occasional fissuring, blistering and hyperhidrosis. Rarely, hyperkeratosis on other areas may be seen (knees, dorsal aspects of the digits). Histopatologically, widened intercellular spaces between keratinocytes are observed.","definition_xrefs":["Orphanet:50942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"striate palmoplantar keratoderma","secondary_identifiers":["GARD:15016","DOID:0081105","SCTID:764958008","icd11.foundation:1171134598","UMLS:C4707237","MEDGEN:1631598"],"synonyms":[{"name":"keratosis palmoplantaris striata","type":"exact"},{"name":"keratosis palmoplantaris striata et areata","type":"exact"},{"name":"keratosis palmoplantaris varians of Wachters","type":"exact"}],"termid":"MONDO:0018865","xrefs":{"Monarch":{"xref_id":"0018865"}}}


id: GO:0080075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a feruloyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"spermidine:feruloyl CoA N-acyltransferase activity","termid":"GO:0080075"}


id: PBO:0071672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 4","termid":"PBO:0071672"}


id: GO:2000730
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id: GO:0022038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provide communication between the right and left cerebral hemispheres.","definition_xrefs":["GOC:jid","GOC:curators","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corpus callosum development","termid":"GO:0022038"}


id: GO:0018527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexylamine + O2 + H2O = cyclohexanone + NH3 + hydrogen peroxide.","definition_xrefs":["PMID:18451","RHEA:18433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary methylamine oxidase activity","termid":"GO:0008131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cyclohexylamine oxidase activity","secondary_identifiers":["EC:1.4.3.12","MetaCyc:CYCLOHEXYLAMINE-OXIDASE-RXN","UM-BBD_reactionID:r0754"],"synonyms":[{"name":"cyclohexylamine:oxygen oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0018527"}


id: PBO:0072017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 4","termid":"PBO:0072017"}


id: MONDO:0006513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of breast cancer that is estrogen-receptor negative","definition_xrefs":["EFO:1000650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"estrogen-receptor negative breast cancer","secondary_identifiers":["DOID:0060076"],"synonyms":[{"name":"ER- breast cancer","type":"exact"}],"termid":"MONDO:0006513","xrefs":{"Monarch":{"xref_id":"0006513"}}}


id: GO:0070126
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id: PBO:0048685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 4","termid":"PBO:0048685"}


id: PBO:0039119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDA pseudogene 2","termid":"PBO:0039119"}


id: SO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant occurring in the intron, within 10 bases of exon.","definition_xrefs":["sanger:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_intronic_splice_region_variant","synonyms":[{"name":"extended intronic splice region variant","type":"exact"}],"termid":"SO:0001995"}


id: GO:0019752
data:
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id: SO:0001515
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted","termid":"SO:0001515"}


id: PBO:0041364
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 19","termid":"PBO:0041364"}


id: PBO:0076783
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin beta-propeller repeat containing 1","termid":"PBO:0076783"}


id: PBO:0083738
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity; required for efficient Golgi-to-ER trafficking in COPI mutants","termid":"PBO:0083738"}


id: PBO:0017788
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy-related CDK inhibitor Srw1","termid":"PBO:0017788"}


id: PBO:0017481
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_downstream_of_or_within","termid":"PBO:0017481"}


id: GO:0004653
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. This reaction is the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis.","definition_xrefs":["EC:2.4.1.41","ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5096537","Reactome:R-HSA-8851619","Reactome:R-HSA-9694438","Reactome:R-HSA-913675","Reactome:R-HSA-9683760","MetaCyc:2.4.1.41-RXN","Reactome:R-HSA-5096532"],"synonyms":[{"name":"UDP-GalNAc:polypeptide N-acetylgalactosaminyl transferase activity","type":"related"},{"name":"UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyl-transferase activity","type":"related"},{"name":"UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-glycoprotein N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-protein N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:kappa-casein polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:protein N-acetylgalactosaminyl transferase activity","type":"related"},{"name":"UDP-acetylgalactosamine-glycoprotein acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-acetylgalactosamine:peptide-N-galactosaminyltransferase activity","type":"related"},{"name":"glycoprotein acetylgalactosaminyltransferase activity","type":"related"},{"name":"polypeptide-N-acetylgalactosamine transferase activity","type":"related"},{"name":"protein-UDP acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-glycoprotein acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0004653"}


id: PBO:0000137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein","termid":"PBO:0000137"}


id: GO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of long-term neuronal synaptic plasticity","synonyms":[{"name":"down regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"down-regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"downregulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"inhibition of long-term neuronal synaptic plasticity","type":"narrow"}],"termid":"GO:0048171"}


id: SO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A joining gene that rearranges at the DNA level and codes the joining region of the variable domain of aT-cell receptor chain.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_J_Gene","synonyms":[{"name":"T_cell_receptor_J_gene","type":"exact"}],"termid":"SO:0002136"}


id: PBO:0029143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_kinase_activity","termid":"PBO:0029143"}


id: GO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of mature proteins from their proproteins by cleavage of the terminal bond of Arg-Xaa-Yaa-Arg-Z motifs where Xaa can be any amino acid and Yaa is Arg or Lys. Releases albumin, complement component C3 and von Willebrand factor from their respective precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete furin activity (obsolete GO:0004276)","synonyms":[{"name":"PACE","type":"related"},{"name":"SPC3","type":"related"},{"name":"dibasic processing enzyme activity","type":"related"},{"name":"furin activity","type":"exact"},{"name":"paired basic amino acid cleaving enzyme","type":"related"},{"name":"paired basic amino acid converting enzyme","type":"related"},{"name":"paired basic amino acid residue cleaving enzyme activity","type":"related"},{"name":"prohormone convertase activity","type":"narrow"},{"name":"serine proteinase PACE","type":"related"}],"termid":"GO:0004276"}


id: GO:0036084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of GDP-fucose into the endoplasmic reticulum lumen. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:sart","PMID:3458237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-fucose transmembrane transport","termid":"GO:0015783"},{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"GDP-fucose import into endoplasmic reticulum lumen","synonyms":[{"name":"GDP-fucose import into endoplasmic reticulum","type":"exact"},{"name":"GDP-fucose transport across endoplasmic reticulum membrane","type":"exact"},{"name":"GDP-fucose transport into endoplasmic reticulum lumen","type":"exact"}],"termid":"GO:0036084"}


id: PBO:0058754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6878","termid":"PBO:0058754"}


id: GO:0036186
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an early phagosome.","definition_xrefs":["GOC:phg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle membrane","termid":"GO:0030670"},{"relation_name":"part_of","term_name":"early phagosome","termid":"GO:0032009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"early phagosome membrane","synonyms":[{"name":"early phagocytic vesicle membrane","type":"exact"}],"termid":"GO:0036186"}


id: PBO:0059331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6","termid":"PBO:0059331"}


id: GO:0008157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein phosphatase 1.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein phosphatase 1 binding","termid":"GO:0008157"}


id: PBO:0050537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPN antisense RNA 1","termid":"PBO:0050537"}


id: PBO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 57","termid":"PBO:0050985"}


id: PBO:0076173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 4","termid":"PBO:0076173"}


id: GO:0051355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events contributing to equilibrioception by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception plays an important role in the ability of an organism to perceive its orientation with respect to gravity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proprioception","termid":"GO:0019230"},{"relation_name":"part_of","term_name":"equilibrioception","termid":"GO:0050957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proprioception involved in equilibrioception","synonyms":[{"name":"equilibrioception by proprioception","type":"exact"},{"name":"perception of orientation with respect to gravity by proprioception","type":"exact"},{"name":"proprioception during equilibrioception","type":"related"}],"termid":"GO:0051355"}


id: MONDO:0004721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete liver neoplasm (obsolete MONDO:0004721)","termid":"MONDO:0004721","xrefs":{"Monarch":{"xref_id":"0004721"}}}


id: MONDO:0008641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited group of small vessel diseases comprised of cerebroretinal vasculopathy (CRV), hereditary vascular retinopathy (HRV) and hereditary endotheliopathy with retinopathy, nephropathy and stroke (HERNS); all exhibiting progressive visual impairment as well as variable cerebral dysfunction.","definition_xrefs":["Orphanet:247691"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disease of glomerular basement membrane (obsolete MONDO:0019723)","termid":"MONDO:0019723"},{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"TREX1-related type 1 interferonopathy","termid":"MONDO:0700256"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal vasculopathy with cerebral leukoencephalopathy and systemic manifestations","secondary_identifiers":["MESH:C566007","SCTID:721141004","MEDGEN:348124","icd11.foundation:554838792","DOID:0111567","NORD:1910","OMIM:192315","SCTID:720854004","UMLS:C1860518","GARD:1217"],"synonyms":[{"name":"ADRVCL","type":"related"},{"name":"CRV","type":"related"},{"name":"HVR","type":"related"},{"name":"RVCL","type":"exact"},{"name":"RVCL-S","type":"exact"},{"name":"autosomal dominant retinal vasculopathy with cerebral leukodystrophy","type":"related"},{"name":"cerebroretinal vasculopathy","type":"related"},{"name":"cerebroretinal vasculopathy, hereditary","type":"related"},{"name":"grand Kaine fulling syndrome","type":"related"},{"name":"grand-Kaine-fulling syndrome","type":"related"},{"name":"hereditary vascular retinopathy","type":"exact"},{"name":"retinal vasculopathy and cerebral leukoencephalopathy","type":"exact"},{"name":"retinal vasculopathy with cerebral leukodystrophy","type":"related"},{"name":"retinopathy, vascular, with cerebral and renal involvement and Raynaud and migraine phenomena","type":"related"},{"name":"vasculopathy, retinal, with cerebral leukodystrophy","type":"related"},{"name":"vasculopathy, retinal, with cerebral leukoencephalopathy and systemic manifestations","type":"exact"}],"termid":"MONDO:0008641","xrefs":{"Monarch":{"xref_id":"0008641"}}}


id: GO:0021821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the release of migrating cells from their interaction with radial glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GOC:cls","GOC:dph","PMID:12626695","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"part_of","term_name":"layer formation in cerebral cortex","termid":"GO:0021819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell-glial cell adhesion involved in cerebral cortex lamination","synonyms":[{"name":"down regulation of cell-glial cell adhesion involved in cerebral cortex lamination","type":"exact"},{"name":"down-regulation of cell-glial cell adhesion involved in cerebral cortex lamination","type":"exact"},{"name":"downregulation of cell-glial cell adhesion involved in cerebral cortex lamination","type":"exact"},{"name":"inhibition of cell-glial cell adhesion involved in cerebral cortex lamination","type":"narrow"}],"termid":"GO:0021821"}


id: PATO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000838 absolute auditory ability value (obsolete PATO:0000838)","termid":"PATO:0000838"}


id: MONDO:0800118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A botryomycosis that involves internal organs such as lungs, liver, or brain. It is a rare disease and has been described mainly in patients with underlying diseases such as diabetes mellitus, cystic fibrosis, or HIV infection. It is most commonly affecting the lungs, although involvement of other organs including liver, spleen, kidney, and brain has also been described.","definition_xrefs":["PMID:9524833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botryomycosis","termid":"MONDO:0400006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visceral botryomycosis","synonyms":[{"name":"pulmonary botromycosis","type":"exact"}],"termid":"MONDO:0800118","xrefs":{"Monarch":{"xref_id":"0800118"}}}


id: MONDO:0001220
data:
  {"annotated_genes":["SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"Hypoparathyroidism is an endocrine disorder in which the parathyroid glands in the neck do not produce enough parathyroid hormone (PTH). Common signs and symptoms include abdominal pain, brittle nails, cataracts, dry hair and skin, muscle cramps, tetany, pain in the face, legs, and feet, seizures, tingling sensation, and weakened tooth enamel (in children). It may be caused by injury to the parathyroid glands (e.g., during surgery). Other causes, include low blood magnesium levels, a side effect of radioactive iodine treatment for hyperthyroidism, metabolic alkalosis, DiGeorge syndrome, and type I polyglandular autoimmune syndrome. The goal of treatment is to restore the calcium and mineral balance in the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"parathyroid gland disorder","termid":"MONDO:0001223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04978":null},"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200775","NCIT:C78350","ICD9:252.1","MEDGEN:6985","NANDO:2200345","SCTID:36976004","MESH:D007011","EFO:0009451","UMLS:C0020626","DOID:11199","NANDO:2100124","ICD10CM:E20","icd11.foundation:1708733050","GARD:6733"],"synonyms":[{"name":"hypoparathyroidism, idiopathic (subtype)","type":"related"},{"name":"parathyroid, underactivity of","type":"related"}],"termid":"MONDO:0001220","terms_by_termid":{"MONDO:0011301":null},"xrefs":{"Monarch":{"xref_id":"0001220"}}}


id: PBO:0074050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A30 antisense RNA 1","termid":"PBO:0074050"}


id: GO:2000273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling receptor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of signaling receptor activity","synonyms":[{"name":"positive regulation of signalling receptor activity","type":"exact"}],"termid":"GO:2000273"}


id: GO:1904897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15358192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell proliferation","synonyms":[{"name":"regulation of Ito cell proliferation","type":"exact"},{"name":"regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904897"}


id: FYPO:0004387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:14766746","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"decreased activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"decreased positive regulation of DNA polymerase activity","type":"broad"},{"name":"decreased positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of DNA-directed DNA polymerase activity","type":"exact"}],"termid":"FYPO:0004387"}


id: GO:0043786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phenylpropanoate + NAD+ = (E)-cinnamate + NADH + H+.","definition_xrefs":["RHEA:50944","PMID:10849007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cinnamate reductase activity","termid":"GO:0043786"}


id: GO:0071734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + biotin + apo-(pyruvate-carboxylase) = AMP + diphosphate + biotin-(pyruvate-carboxylase).","definition_xrefs":["PMID:10551847","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin-[pyruvate-carboxylase] ligase activity (obsolete GO:0071734)","synonyms":[{"name":"biotin-[pyruvate carboxylase] ligase activity","type":"exact"},{"name":"biotin-[pyruvate carboxylase] synthetase activity","type":"exact"},{"name":"biotin-pyruvate carboxylase synthetase activity","type":"exact"},{"name":"biotin-pyruvate-carboxylase ligase activity","type":"exact"},{"name":"biotin:apo-pyruvate-carboxylase ligase","type":"exact"}],"termid":"GO:0071734"}


id: GO:0160198
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61239],"is_not":false,"summary":null,"term":"GO:0160198"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,polycis-polyprenal+ H+ + NADPH = ditrans,polycis-dolichal+ NADP.","definition_xrefs":["PMID:38821050","RHEA:80727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"polyprenal reductase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-9971","EC:1.3.1.94"],"termid":"GO:0160198","terms_by_termid":{"GO:0160198":null}}


id: MONDO:0020524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary parathyroid hyperplasia (obsolete MONDO:0020524)","secondary_identifiers":["Orphanet:99878"],"synonyms":[{"name":"familial parathyroids hyperplasia","type":"exact"},{"name":"hereditary parathyroids hyperplasia","type":"related"}],"termid":"MONDO:0020524","xrefs":{"Monarch":{"xref_id":"0020524"}}}


id: GO:1990703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi medial membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi medial cisterna membrane (obsolete GO:1990703)","synonyms":[{"name":"integral component of medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990703"}


id: PBO:0042210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin J pseudogene 1","termid":"PBO:0042210"}


id: GO:0047789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: creatinine + H2O = creatine.","definition_xrefs":["RHEA:14533","EC:3.5.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"creatininase activity","secondary_identifiers":["KEGG_REACTION:R01884","MetaCyc:CREATININASE-RXN"],"synonyms":[{"name":"creatinine amidohydrolase activity","type":"related"},{"name":"creatinine hydrolase","type":"broad"}],"termid":"GO:0047789"}


id: MONDO:0010718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Absent radius-anogenital anomalies syndrome is a rare, genetic limb reduction defects syndrome characterized by bilateral radial aplasia/hypoplasia manifesting with absent/short forearms in association with anogenital abnormalities (e.g. hypospadias or imperforate anus). Additional features reported include hydrocephalus and absent preaxial digits. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:3016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"absent radius-anogenital anomalies syndrome","secondary_identifiers":["UMLS:C1839410","GARD:4633","MEDGEN:333312","OMIM:312190","MESH:C535281"],"synonyms":[{"name":"radial aplasia and anogenital anomalies","type":"related"},{"name":"radial aplasia, X-linked","type":"related"},{"name":"radius absent anogenital anomalies","type":"related"}],"termid":"MONDO:0010718","xrefs":{"Monarch":{"xref_id":"0010718"}}}


id: PBO:0038701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 14","termid":"PBO:0038701"}


id: MONDO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain compression","secondary_identifiers":["UMLS:C0009592","DOID:11457","ICD10CM:G93.5","SCTID:46963008","MEDGEN:507585","ICD9:348.4"],"termid":"MONDO:0001291","xrefs":{"Monarch":{"xref_id":"0001291"}}}


id: GO:0099020
data:
  {"annotated_genes":["SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92853],"is_not":false,"summary":null,"term":"GO:0099020"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the perinuclear endoplasmic reticulum.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"perinuclear endoplasmic reticulum","termid":"GO:0097038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"perinuclear endoplasmic reticulum lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099020","terms_by_termid":{"GO:0099020":null}}


id: FYECO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited leucine","secondary_identifiers":["PMID:7565608"],"termid":"FYECO:0000280"}


id: GO:0045813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, calcium modulating pathway","termid":"GO:0008591"},{"relation_name":"is_a","term_name":"positive regulation of non-canonical Wnt signaling pathway","termid":"GO:2000052"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway, calcium modulating pathway","termid":"GO:0007223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway, calcium modulating pathway","synonyms":[{"name":"activation of frizzled-2 signaling pathway","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway, calcium modulating pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway, calcium modulating pathway","type":"exact"},{"name":"positive regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"positive regulation of frizzled-2 signalling pathway","type":"exact"},{"name":"stimulation of frizzled-2 signaling pathway","type":"narrow"},{"name":"up regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"up-regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"upregulation of frizzled-2 signaling pathway","type":"exact"}],"termid":"GO:0045813"}


id: GO:0044869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism decreases viral exo-alpha-sialidase activity, the catalysis of the hydrolysis of peptide bonds in a protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of viral exo-alpha-sialidase activity (obsolete GO:0044869)","termid":"GO:0044869"}


id: PBO:0083966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID Complex subunit, serves as adaptor for regulatory subunit Vid24p; protein involved in proteasome-dependent catabolite degradation of fructose-1,6-bisphosphatase (FBPase); localized to the nucleus and the cytoplasm","termid":"PBO:0083966"}


id: GO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate + Na+(out) => ATP + H2O + Na+(in), by a rotational mechanism.","definition_xrefs":["RHEA:58158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sodium-transporting ATP synthase activity, rotational mechanism","secondary_identifiers":["TC:3.A.2.1.2"],"synonyms":[{"name":"sodium-translocating F-type ATPase activity","type":"exact"},{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0046932"}


id: GO:0071493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 280 to 315 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV-B","termid":"GO:0010224"},{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to UV-B","synonyms":[{"name":"cellular response to UV-B light stimulus","type":"exact"},{"name":"cellular response to UV-B radiation stimulus","type":"exact"},{"name":"cellular response to UVB light stimulus","type":"exact"},{"name":"cellular response to UVB radiation stimulus","type":"exact"},{"name":"cellular response to medium wave ultraviolet light stimulus","type":"exact"},{"name":"cellular response to medium wave ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0071493"}


id: PBO:0052127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 5","termid":"PBO:0052127"}


id: GO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 4 isopentenyl diphosphate = 4 diphosphate + all-trans-heptaprenyl diphosphate.","definition_xrefs":["RHEA:27794","PMID:9708911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"heptaprenyl diphosphate synthase activity","secondary_identifiers":["GO:0036422","MetaCyc:TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN","EC:2.5.1.30"],"synonyms":[{"name":"HepPP synthase activity","type":"related"},{"name":"all-trans-heptaprenyl-diphosphate synthase activity","type":"exact"},{"name":"heptaprenyl pyrophosphate synthase activity","type":"related"},{"name":"heptaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-hexaprenyltranstransferase activity","type":"exact"}],"termid":"GO:0000010"}


id: PBO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_paralogy_relationship_with","termid":"PBO:0034096"}


id: FYPO:0007207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize aspartate, and therefore requires aspartate in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for aspartate","synonyms":[{"name":"aspartate auxotrophy","type":"exact"},{"name":"growth auxotrophic for aspartate during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for aspartate during vegetative growth","type":"exact"},{"name":"growth auxotrophic for aspartatic acid","type":"exact"}],"termid":"FYPO:0007207"}


id: PBO:0076156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 divergent transcript","termid":"PBO:0076156"}


id: GO:0015814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of p-aminobenzoyl-glutamate, the anion of p-aminobenzoyl-glutamic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"dipeptide transport","termid":"GO:0042938"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"p-aminobenzoyl-glutamate transport","termid":"GO:0015814"}


id: GO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alginic acid metabolic process","synonyms":[{"name":"alginate metabolic process","type":"exact"},{"name":"alginate metabolism","type":"exact"},{"name":"alginic acid metabolism","type":"exact"}],"termid":"GO:0042120"}


id: PBO:0053147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 3","termid":"PBO:0053147"}


id: SO:0001223
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by histone deacetylation.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced_by_histone_modification","termid":"SO:0001221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_histone_deacetylation","synonyms":[{"name":"silenced by histone deacetylation","type":"exact"}],"termid":"SO:0001223"}


id: FYPO:0001985
data:
  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