# terms

id: PBO:0004117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc25","termid":"PBO:0004117"}


id: PBO:0004659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein, histone chaperone Hip1","termid":"PBO:0004659"}


id: MOD:00317
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-3,4-didehydroretinylidene-L-lysine.","definition_xrefs":["PubMed:4056688","PubMed:3257009","PubMed:10717661","Unimod:433#K","RESID:AA0312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-3,4-didehydroretinylidene-L-lysine","synonyms":[{"name":"(S)-2-amino-6-[(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexa-1,3-dien-1-yl)-2,4,6,8-nonatetraenylidene]aminohexanoic acid","type":"exact"},{"name":"3,4-didehydroretinylidene","type":"related"},{"name":"Didehydroretinylidene","type":"related"},{"name":"N6-(3,4-didehydroretinylidene)-L-lysine","type":"exact"},{"name":"N6-3-dehydroretinal-L-lysine","type":"exact"},{"name":"N6-3-dehydroretinyl-lysine","type":"exact"}],"termid":"MOD:00317"}


id: GO:0030780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 12-hydroxydihydrochelirubine + S-adenosyl-L-methionine(1+) = S-adenosyl-L-homocysteine + dihydromacarpine + H+.","definition_xrefs":["RHEA:21092","EC:2.1.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"12-hydroxydihydrochelirubine 12-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.120-RXN","KEGG_REACTION:R04705"],"synonyms":[{"name":"S-adenosyl-L-methionine:12-hydroxydihydrochelirubine 12-O-methyltransferase activity","type":"related"}],"termid":"GO:0030780"}


id: MONDO:1010900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the MFSD8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, MFSD8-related, dog","secondary_identifiers":["OMIA:001962-9615"],"synonyms":[{"name":"CLN7","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 7, dog","type":"related"}],"termid":"MONDO:1010900","xrefs":{"Monarch":{"xref_id":"1010900"}}}


id: MONDO:0018991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatoportal sclerosis (HPS) is a rare disorder characterized by sclerosis of the intrahepatic portal veins, non-cirrhotic portal hypertension, asymptomatic splenomegaly and recurrent variceal bleeding.","definition_xrefs":["Orphanet:64743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatoportal sclerosis","secondary_identifiers":["SCTID:718096004","UMLS:C4476911","MEDGEN:1391122","GARD:18865"],"synonyms":[{"name":"obliterative portal venopathy","type":"exact"}],"termid":"MONDO:0018991","xrefs":{"Monarch":{"xref_id":"0018991"}}}


id: PR:Q9UQX0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superoxide dismutase [Mn], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11404:SF5","OMA:SCHPO01332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase [Mn], mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.01","secondary_identifiers":["UniProtKB:Q9UQX0"],"synonyms":[{"name":"Spom972h-SOD2","type":"exact"}],"termid":"PR:Q9UQX0"}


id: MONDO:0021367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The phase of chronic myeloid leukemia following the chronic phase (leukemia, myeloid, chronic-phase), where there are increased systemic symptoms, worsening cytopenias, and refractory leukocytosis.","definition_xrefs":["MESH:D015465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic myelogenous leukemia, BCR-ABL1 positive","termid":"MONDO:0011996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"leukemia, myeloid, accelerated-phase","secondary_identifiers":["UMLS:C0023472","MEDGEN:6059"],"synonyms":[{"name":"Accelerated Phase CML","type":"related"},{"name":"Accelerated Phase Chronic Granulocytic Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Granulocytic Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelocytic Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myelocytic Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukemia, BCR-ABL1 Positive","type":"related"},{"name":"Accelerated Phase Chronic Myeloid Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myeloid Leukemia","type":"related"},{"name":"Accelerated phase chronic myeloid leukaemia","type":"related"},{"name":"Accelerated phase chronic myeloid leukemia","type":"related"},{"name":"Aggressive-Phase CML","type":"related"},{"name":"Aggressive-Phase Chronic Myelocytic Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelocytic Leukemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelogenous Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelogenous Leukemia","type":"related"},{"name":"Aggressive-Phase Chronic Myeloid Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myeloid Leukemia","type":"related"},{"name":"CML ACCELERATED","type":"related"},{"name":"CML AGGRESSIVE","type":"related"},{"name":"Leukemia, Myelogenous, Aggressive Phase","type":"related"},{"name":"Leukemia, Myelogenous, Aggressive-Phase","type":"related"},{"name":"Leukemia, Myeloid, Accelerated Phase","type":"related"},{"name":"Leukemia, Myeloid, Accelerated-Phase","type":"related"},{"name":"Leukemia, Myeloid, Aggressive-Phase","type":"related"},{"name":"Myelogenous Leukemia, Chronic, Aggressive Phase","type":"related"},{"name":"Myelogenous Leukemia, Chronic, Aggressive-Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Accelerated Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Accelerated-Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Aggressive Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Aggressive-Phase","type":"related"}],"termid":"MONDO:0021367","xrefs":{"Monarch":{"xref_id":"0021367"}}}


id: GO:0006187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGTP, deoxyguanosine triphosphate (2'-deoxyguanosine 5'-triphosphate) from other compounds, including gGDP, deoxyguanosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dGDP metabolic process","termid":"GO:0046066"},{"relation_name":"is_a","term_name":"dGTP biosynthetic process","termid":"GO:0046071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dGTP biosynthetic process from dGDP","synonyms":[{"name":"dGTP anabolism from dGDP","type":"exact"},{"name":"dGTP formation from dGDP","type":"exact"},{"name":"dGTP synthesis from dGDP","type":"exact"}],"termid":"GO:0006187"}


id: PBO:0040230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 2","termid":"PBO:0040230"}


id: PBO:0030272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0030272"}


id: PBO:0039923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 25","termid":"PBO:0039923"}


id: GO:0071665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains gamma-catenin and TCF7L2 (TCF4), binds to the TCF DNA motif within a promoter element, and is involved in the regulation of WNT target gene transcription.","definition_xrefs":["PMID:14661054","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catenin-TCF7L2 complex","termid":"GO:0071664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"gamma-catenin-TCF7L2 complex","synonyms":[{"name":"gamma-catenin-TCF4 complex","type":"exact"},{"name":"plakoglobin-TCF4 complex","type":"exact"}],"termid":"GO:0071665"}


id: PBO:0087405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate receptor of the glucose-induced degradation-deficient (GID) complex that targets gluconeogenic enzymes for proteasomal degradation upon switch from ethanol to glucose as a carbon source; overexpression causes a cell cycle delay or arrest; null mutation results in a decrease in plasma membrane electron transport; protein abundance increases in response to DNA replication stress","termid":"PBO:0087405"}


id: PBO:0066498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFT1 homolog","termid":"PBO:0066498"}


id: PBO:0018084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam13","termid":"PBO:0018084"}


id: PBO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 48","termid":"PBO:0045858"}


id: GO:0042263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neuropeptide F and transmitting the signal within the cell to initiate a change in cell activity. Neuropeptide F is an arthropod peptide of more than 28 residues (typically 28-45) with a consensus C-terminal RxRFamide (commonly RPRFa, but also RVRFa.","definition_xrefs":["PMID:21440021","GOC:bf","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neuropeptide F receptor activity","synonyms":[{"name":"NPF receptor activity","type":"exact"}],"termid":"GO:0042263"}


id: GO:0061228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric nephron are generated and organized. A mesonephric nephron is the functional unit of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron morphogenesis","termid":"GO:0072028"},{"relation_name":"part_of","term_name":"mesonephros morphogenesis","termid":"GO:0061206"},{"relation_name":"part_of","term_name":"mesonephric nephron development","termid":"GO:0061215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}


id: GO:0055051
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites out of the cell, consisting of 4 domains: two ATP-binding domains and two membrane spanning domains. In some cases, all 4 domains are contained on 1 polypeptide, while in others one ATP-binding domain and one membrane spanning domain are together on one polypeptide in what is called a half transporter. Two half-transporters come together to form a functional transporter. Transport of the substrate across the membrane is driven by the hydrolysis of ATP.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex, integrated substrate binding","termid":"GO:0055051"}


id: PBO:0005787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Snf22","termid":"PBO:0005787"}


id: GO:1901932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bicyclogermacrene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"bicyclogermacrene metabolic process","synonyms":[{"name":"bicyclogermacrene metabolism","type":"exact"}],"termid":"GO:1901932"}


id: GO:0002781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of an antifungal peptide during an immune response, resulting in an increase in intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:11807545","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide production","termid":"GO:0002775"},{"relation_name":"part_of","term_name":"antifungal humoral response","termid":"GO:0019732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antifungal peptide production","termid":"GO:0002781"}


id: MONDO:0019150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Familial restrictive cardiomyopathy is a genetic form of heart disease, in which the heart muscle is stiff and cannot fully relax after each contraction. Impaired muscle relaxation causes blood to back up in the atria and lungs, which reduces the amount of blood in the ventricles.","gene_count":0,"genotype_count":0,"name":"obsolete familial isolated restrictive cardiomyopathy (obsolete MONDO:0019150)","secondary_identifiers":["Orphanet:75249"],"synonyms":[{"name":"familial or idiopathic restrictive cardiomyopathy","type":"exact"}],"termid":"MONDO:0019150","xrefs":{"Monarch":{"xref_id":"0019150"}}}


id: GO:0008243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the specific cleavage of an Arg-Val bond in plasminogen to form plasmin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete plasminogen activator activity (obsolete GO:0008243)","synonyms":[{"name":"abbokinase activity","type":"related"},{"name":"cellular plasminogen activator activity","type":"narrow"},{"name":"double-chain urokinase-type plasminogen activator","type":"related"},{"name":"plasminogen activator activity","type":"exact"},{"name":"plasminogen activator, tissue-type","type":"related"},{"name":"t-PA","type":"related"},{"name":"t-plasminogen activator activity","type":"narrow"},{"name":"tPA activity","type":"narrow"},{"name":"tissue plasminogen activator activity","type":"narrow"},{"name":"tissue-type plasminogen activator activity","type":"related"},{"name":"two-chain urokinase-type plasminogen activator","type":"related"},{"name":"u-PA","type":"related"},{"name":"u-plasminogen activator activity","type":"narrow"},{"name":"uPA","type":"related"},{"name":"urinary esterase A","type":"related"},{"name":"urinary plasminogen activator activity","type":"narrow"},{"name":"urokinase activity","type":"related"},{"name":"urokinase plasminogen activator","type":"related"},{"name":"urokinase-type plasminogen activator","type":"related"}],"termid":"GO:0008243"}


id: GO:0019407
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"},{"relation_name":"is_a","term_name":"alditol catabolic process","termid":"GO:0019405"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hexitol catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"hexitol breakdown","type":"exact"},{"name":"hexitol catabolism","type":"exact"},{"name":"hexitol degradation","type":"exact"}],"termid":"GO:0019407","terms_by_termid":{"GO:0006062":null}}


id: MONDO:0021386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the mediastinum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of mediastinum","secondary_identifiers":["NCIT:C3221","SCTID:126725000","ICD9:239.89","MEDGEN:44322","UMLS:C0025063"],"synonyms":[{"name":"mediastinal neoplasm","type":"exact"},{"name":"mediastinal tumor","type":"exact"},{"name":"mediastinal tumour","type":"exact"},{"name":"mediastinum neoplasm","type":"exact"},{"name":"mediastinum neoplasm (disease)","type":"exact"},{"name":"mediastinum tumor","type":"exact"},{"name":"mediastinum tumour","type":"exact"},{"name":"neoplasm of mediastinum","type":"exact"},{"name":"neoplasm of the mediastinum","type":"exact"},{"name":"tumor of mediastinum","type":"exact"},{"name":"tumor of the mediastinum","type":"exact"},{"name":"tumour of mediastinum","type":"exact"},{"name":"tumour of the mediastinum","type":"exact"}],"termid":"MONDO:0021386","xrefs":{"Monarch":{"xref_id":"0021386"}}}


id: GO:0141032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by reorganizing the actin filaments, in a way that keeps the total filementous actin remains approximately constant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22212282","PMID:31130928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin filament reorganization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament rearrangement","type":"exact"},{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament reorganization","type":"exact"}],"termid":"GO:0141032"}


id: PBO:0080176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 11","termid":"PBO:0080176"}


id: GO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action or movement due to the application of a sudden unexpected stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"startle response","secondary_identifiers":["Wikipedia:Startle_reaction"],"termid":"GO:0001964"}


id: PBO:0040632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 1","termid":"PBO:0040632"}


id: SO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop_gained (SO:0001587) variant that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_gained","termid":"SO:0001587"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained_NMD_escaping","synonyms":[{"name":"stop gained variant-nonsense-mediated decay escaping","type":"exact"},{"name":"stop gained-NMD escaping","type":"exact"}],"termid":"SO:0002322"}


id: PBO:0057561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 718","termid":"PBO:0057561"}


id: PBO:0109659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Pwi1","termid":"PBO:0109659"}


id: GO:0098873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Propagation of an action potential in a neuron, from its site of initiation (typically the axon hillock) towards the soma.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential back-propagation","termid":"GO:0098873"}


id: MONDO:0054791
data:
  {"annotated_genes":["SJAG_02665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85760],"is_not":false,"summary":null,"term":"MONDO:0054791"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4693779","MEDGEN:1631337","OMIM:617964","DOID:0070405"],"synonyms":[{"name":"HLD16","type":"related"},{"name":"leukodystrophy, hypomyelinating, 16","type":"exact"}],"termid":"MONDO:0054791","terms_by_termid":{"MONDO:0054791":null},"xrefs":{"Monarch":{"xref_id":"0054791"}}}


id: GO:0010284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lariciresinol + NADPH + H+ = secoisolariciresinol + NADP+.","definition_xrefs":["PMID:7592828","PMID:10066819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"lariciresinol reductase activity","termid":"GO:0010284"}


id: PBO:0050647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 3, pseudogene","termid":"PBO:0050647"}


id: GO:0044418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of DNA from an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete translocation of DNA into host (obsolete GO:0044418)","synonyms":[{"name":"translocation of DNA into other organism during symbiotic interaction","type":"broad"},{"name":"translocation of DNA into other organism involved in symbiotic interaction","type":"broad"},{"name":"transport of DNA into host","type":"exact"},{"name":"transport of DNA into other organism during symbiotic interaction","type":"broad"}],"termid":"GO:0044418"}


id: FYPO:0001458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"},{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K14 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone lysine H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001458"}


id: PBO:0058053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4274","termid":"PBO:0058053"}


id: GO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Maintains the phosphorylation state of certain molecules by associating with them and preventing them from associating with active phosphatases, and thus inhibiting the enzyme activity without interacting with the enzyme. Often pertains to proteins belonging to dual-specificity phosphatase family but lacking critical active site residues.","definition_xrefs":["GOC:ajp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase inhibitor activity","termid":"GO:0019212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674","GO:0030234","GO:0004857"],"is_obsolete":false,"name":"pseudophosphatase activity","termid":"GO:0001691"}


id: PR:Q9P784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl401 gene.","definition_xrefs":["UniProtKB:Q9P784","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.06","synonyms":[{"name":"Spom972h-rpl401","type":"exact"}],"termid":"PR:Q9P784"}


id: GO:1900844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monodictyphenone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of monodictyphenone biosynthetic process","termid":"GO:1900843"},{"relation_name":"negatively_regulates","term_name":"monodictyphenone biosynthetic process","termid":"GO:1900815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monodictyphenone biosynthetic process","synonyms":[{"name":"down regulation of monodictyphenone biosynthetic process","type":"exact"},{"name":"down-regulation of monodictyphenone biosynthetic process","type":"exact"},{"name":"downregulation of monodictyphenone biosynthetic process","type":"exact"}],"termid":"GO:1900844"}


id: MONDO:0009066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephropathic juvenile cystinosis is the intermediate form, in regards to severity and age of onset, of cystinosis, a metabolic disease characterized by an accumulation of cystine inside the lysosomes that causes damage in different organs and tissues, particularly in the kidneys and eyes.","definition_xrefs":["Orphanet:411634"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"},{"relation_name":"is_a","term_name":"nephropathic cystinosis","termid":"MONDO:0100151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0004736","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"juvenile nephropathic cystinosis","secondary_identifiers":["MESH:C562683","GARD:17685","ICD10EXP:E72.0+","MEDGEN:75701","NANDO:1200163","icd11.foundation:422905632","SCTID:22830006","OMIM:219900","UMLS:C0268626","ICD10EXP:N16.3*","NANDO:2201235"],"synonyms":[{"name":"cystinosis, intermediate","type":"related"},{"name":"cystinosis, late-onset juvenile or adolescent nephropathic","type":"exact"},{"name":"cystinosis, late-onset juvenile or adolescent nephropathic type","type":"related"},{"name":"intermediate cystinosis","type":"exact"},{"name":"juvenile cystinosis","type":"exact"},{"name":"juvenile nephropathic cystinosis","type":"exact"}],"termid":"MONDO:0009066","xrefs":{"Monarch":{"xref_id":"0009066"}}}


id: PBO:0047877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(4)(q12)","termid":"PBO:0047877"}


id: PBO:0028658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_anaphase-promoting_complex-dependent_proteasomal_ubiquitin-dependent_protein_catabolic_process","termid":"PBO:0028658"}


id: MONDO:0016013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Foetal methylmercury syndrome is characterized by a group of symptoms that may be observed in a fetus or newborn when the mother was exposed during pregnancy to excessive amounts of methylmercury.","definition_xrefs":["Orphanet:1917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal methylmercury syndrome","secondary_identifiers":["icd11.foundation:1975519045","ICD9:759.89","MESH:D020262","SCTID:62110005","UMLS:C0265376","GARD:3575","MEDGEN:82710"],"synonyms":[{"name":"Methyl mercury antenatal exposure","type":"related"},{"name":"Methyl mercury antenatal infection","type":"exact"},{"name":"Minamata disease","type":"related"}],"termid":"MONDO:0016013","xrefs":{"Monarch":{"xref_id":"0016013"}}}


id: PBO:0049164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 6","termid":"PBO:0049164"}


id: GO:1901175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lycopene.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lycopene metabolic process","synonyms":[{"name":"lycopene metabolism","type":"exact"}],"termid":"GO:1901175"}


id: PBO:0084243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner nuclear membrane (INM) protein; contains helix-extension-helix (HEH) motif, nuclear localization signal sequence; targeting to the INM requires the Srp1p-Kap95p karyopherins and the Ran cycle; HEH2 has a paralog, SRC1, that arose from the whole genome duplication","termid":"PBO:0084243"}


id: GO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process that protects an organism from invading foreign DNA.","definition_xrefs":["PMID:20062055","GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of foreign intracellular DNA","secondary_identifiers":["GO:0044356"],"synonyms":[{"name":"clearance of foreign intracellular DNA by conversion of DNA cytidine to uridine","type":"narrow"}],"termid":"GO:0044355"}


id: MONDO:0044766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Marfan Syndrome 3 (obsolete MONDO:0044766)","secondary_identifiers":["GTR:AN0100577","GTR:AN0100578"],"synonyms":[{"name":"MFS 3","type":"related"},{"name":"Marfan syndrome type 3","type":"related"}],"termid":"MONDO:0044766","xrefs":{"Monarch":{"xref_id":"0044766"}}}


id: GO:0048580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-embryonic development","termid":"GO:0048580"}


id: GO:0046682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclodiene stimulus. A cyclodiene is any organic insecticide (as dieldrin or chlordane) with a chlorinated methylene group forming a bridge across a 6-membered carbon ring.","definition_xrefs":["ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclodiene","synonyms":[{"name":"cyclodiene resistance","type":"related"},{"name":"cyclodiene susceptibility/resistance","type":"related"}],"termid":"GO:0046682"}


id: MONDO:0008261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary sclerosing poikiloderma, Weary type","secondary_identifiers":["GARD:17136","MEDGEN:91006","UMLS:C0343094","icd11.foundation:1538273632","MESH:C562824","Orphanet:221039","OMIM:173700"],"synonyms":[{"name":"poikiloderma, hereditary sclerosing","type":"related"}],"termid":"MONDO:0008261","xrefs":{"Monarch":{"xref_id":"0008261"}}}


id: MOD:01476
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an 2'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-fluoro-L-phenylalanine","synonyms":[{"name":"2-fluorophenylalanine","type":"exact"},{"name":"o-fluorophenylalanine","type":"exact"},{"name":"ortho-fluorophenylalanine","type":"exact"}],"termid":"MOD:01476"}


id: GO:0002703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"regulates","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated immunity","synonyms":[{"name":"regulation of immune cell mediated immunity","type":"exact"},{"name":"regulation of leucocyte mediated immunity","type":"exact"}],"termid":"GO:0002703"}


id: PBO:0065599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 15","termid":"PBO:0065599"}


id: FYPO:0004934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G1 phase of the mitotic cell cycle is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during mitotic G1 phase","synonyms":[{"name":"increased RNA accumulation during mitotic G1 phase","type":"related"},{"name":"increased RNA level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased RNA level during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"increased mRNA level during mitotic G1 phase","type":"narrow"},{"name":"increased transcript level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004934"}


id: MONDO:0009516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Absence deformity of leg B cataract is a very rare syndromic limb malformation described in two distantly related boys. It is characterized by absence deformity of the left leg, progressive scoliosis, short stature, congenital cataract associated with dysplasia of the optic nerve. No intellectual deficit has been observed.","definition_xrefs":["Orphanet:2310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"absence deformity of leg-cataract syndrome","secondary_identifiers":["GARD:16593","UMLS:C1855523","OMIM:246000","MEDGEN:343374","MESH:C565442"],"synonyms":[{"name":"leg, absence deformity of, with congenital cataract","type":"related"}],"termid":"MONDO:0009516","xrefs":{"Monarch":{"xref_id":"0009516"}}}


id: GO:0006244
data:
  {"annotated_genes":["SJAG_03676","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03676":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine nucleotide breakdown","type":"exact"},{"name":"pyrimidine nucleotide catabolism","type":"exact"},{"name":"pyrimidine nucleotide degradation","type":"exact"}],"termid":"GO:0006244","terms_by_termid":{"GO:0006256":null,"GO:0046081":null}}


id: MONDO:0007084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial focal alopecia","secondary_identifiers":["UMLS:C1863092","MESH:C566301","MEDGEN:350835","OMIM:104110"],"synonyms":[{"name":"ALPF","type":"related"},{"name":"alopecia, familial focal","type":"exact"}],"termid":"MONDO:0007084","xrefs":{"Monarch":{"xref_id":"0007084"}}}


id: PBO:0051274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 5","termid":"PBO:0051274"}


id: MONDO:0019048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of vascular disease that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare vascular disease (obsolete MONDO:0019048)","secondary_identifiers":["Orphanet:68362"],"synonyms":[{"name":"rare vascular disease","type":"exact"}],"termid":"MONDO:0019048","xrefs":{"Monarch":{"xref_id":"0019048"}}}


id: GO:0048721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the clypeus are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"clypeus development","termid":"GO:0048723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus morphogenesis","termid":"GO:0048721"}


id: GO:0043316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a cytotoxic T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"},{"relation_name":"part_of","term_name":"T cell activation involved in immune response","termid":"GO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cytotoxic T cell degranulation","synonyms":[{"name":"cytotoxic T cell granule exocytosis","type":"exact"},{"name":"cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"cytotoxic T-cell degranulation","type":"exact"},{"name":"cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043316"}


id: GO:1901313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901313)","synonyms":[{"name":"activation of expression of extracellular matrix proteins","type":"exact"},{"name":"activation of extracellular matrix protein production","type":"related"},{"name":"activation of gene expression involved in extracellular matrix organization","type":"narrow"},{"name":"positive regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"positive regulation of extracellular matrix protein production","type":"related"},{"name":"up regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"up regulation of extracellular matrix protein production","type":"related"},{"name":"up regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"up-regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"up-regulation of extracellular matrix protein production","type":"related"},{"name":"up-regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"upregulation of expression of extracellular matrix proteins","type":"exact"},{"name":"upregulation of extracellular matrix protein production","type":"related"},{"name":"upregulation of gene expression involved in extracellular matrix organization","type":"exact"}],"termid":"GO:1901313"}


id: GO:0070121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the Kupffer's vesicle over time from its initial formation until its mature state. The Kupffer's vesicle is a small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Kupffer's vesicle development","synonyms":[{"name":"KV development","type":"exact"}],"termid":"GO:0070121"}


id: PBO:0072712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4 pseudogene 1","termid":"PBO:0072712"}


id: PBO:0041297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4A","termid":"PBO:0041297"}


id: GO:0021958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the dorsal root ganglion towards target cells in the medulla. This axonal process is a member of those that make up the gracilis tract, a group of axons that are from neurons involved in proprioception from the lower trunk and lower limb.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","PMID:12867698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gracilis tract morphogenesis","synonyms":[{"name":"tract of Goll morphogenesis","type":"exact"}],"termid":"GO:0021958"}


id: FYPO:0002215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"viable curved elongated vegetative cell","synonyms":[{"name":"curved elongated viable cell","type":"exact"},{"name":"viable curved elongated cell","type":"exact"},{"name":"viable curved elongated cell during vegetative growth","type":"exact"},{"name":"viable curved elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002215"}


id: FYPO:0003725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003725"}


id: MONDO:0000170
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"A developmental disorder of the eye characterized by unilateral or bilateral microphthalmia associated with ocular coloboma.","definition_xrefs":["Orphanet:98938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"coloboma","termid":"MONDO:0001476"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537463","MEDGEN:444071","OMIMPS:300345","UMLS:C2931500","GARD:3644"],"synonyms":[{"name":"MAC","type":"exact"},{"name":"MCOPCB1","type":"related"},{"name":"colobomatous microphthalmia","type":"exact"},{"name":"microphthalmia associated with colobomatous cyst","type":"related"},{"name":"microphthalmia with colobomatous cyst","type":"exact"},{"name":"microphthalmia-anophthalmia-coloboma syndrome","type":"exact"},{"name":"microphthalmos bilateral, colobomatous orbital cyst","type":"related"}],"termid":"MONDO:0000170","terms_by_termid":{"MONDO:0013783":null},"xrefs":{"Monarch":{"xref_id":"0000170"}}}


id: MONDO:1012266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome, non-human animal","termid":"MONDO:1011919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome, horse","secondary_identifiers":["OMIA:000991-9796"],"synonyms":[{"name":"AIS, horse","type":"exact"}],"termid":"MONDO:1012266","xrefs":{"Monarch":{"xref_id":"1012266"}}}


id: GO:0140667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of oxytocin.","definition_xrefs":["PMID:25096581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"regulates","term_name":"oxytocin production","termid":"GO:0036162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of oxytocin production","termid":"GO:0140667"}


id: PBO:0077110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 17B","termid":"PBO:0077110"}


id: PBO:0069442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 707, pseudogene","termid":"PBO:0069442"}


id: MONDO:0008844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Athrombia, essential","secondary_identifiers":["MESH:C565927","OMIM:209050","UMLS:C1859595","MEDGEN:349197"],"synonyms":[{"name":"Athrombia, essential","type":"exact"}],"termid":"MONDO:0008844","xrefs":{"Monarch":{"xref_id":"0008844"}}}


id: PBO:0041346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 70","termid":"PBO:0041346"}


id: PBO:0052053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 2","termid":"PBO:0052053"}


id: PBO:0064908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 1","termid":"PBO:0064908"}


id: MONDO:0006206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the fallopian tube.","direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube cancer","termid":"MONDO:0002158"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube carcinoma","secondary_identifiers":["MEDGEN:66762","UMLS:C0238122","SCTID:276870001","EFO:1000251","NCIT:C3867","DOID:1963"],"synonyms":[{"name":"cancer of fallopian tube","type":"broad"},{"name":"cancer of the fallopian tube","type":"broad"},{"name":"carcinoma of fallopian tube","type":"exact"},{"name":"carcinoma of the fallopian tube","type":"exact"},{"name":"fallopian tube Ca","type":"exact"},{"name":"fallopian tube cancer","type":"broad"},{"name":"fallopian tube carcinoma","type":"exact"}],"termid":"MONDO:0006206","xrefs":{"Monarch":{"xref_id":"0006206"}}}


id: PBO:0068034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 339","termid":"PBO:0068034"}


id: PBO:0061931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 1","termid":"PBO:0061931"}


id: GO:0047013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholate + NADP+ = 3-alpha,7-alpha-dihydroxy-12-oxo-5-beta-cholanate + H+ + NADPH.","definition_xrefs":["RHEA:14129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholate 12-alpha dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.176","MetaCyc:1.1.1.176-RXN","KEGG_REACTION:R02793"],"synonyms":[{"name":"12-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxysteroid:NADP+ 12-oxidoreductase activity","type":"broad"},{"name":"NAD-dependent 12alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"NADP-12alpha-hydroxysteroid dehydrogenase activity","type":"broad"}],"termid":"GO:0047013"}


id: MONDO:0971179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arterial tortuosity-bone fragility syndrome","secondary_identifiers":["MEDGEN:1855920","UMLS:C5935641","OMIM:620908"],"termid":"MONDO:0971179","xrefs":{"Monarch":{"xref_id":"0971179"}}}


id: GO:0120102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the bacterial-type flagellum that is located at the cytoplasmic side of the MS ring and composed of six membrane proteins (FlhA, FlhB, FliP, FliQ, FliR, and FliO, or orthologs thereof) and three soluble proteins (FliI, FliH, and FliJ, or orthologs thereof) in the cytoplasm. It is responsible for secretion of flagellar type III protein substrates, including the proteins of the flagellar rod, hook, and filament.","definition_xrefs":["PMID:25251856","PMID:10572114","DOI:10.1002/9780470015902.a0000744.pub4","PMID:12624192","GOC:cilia","PMID:24697492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum secretion apparatus","synonyms":[{"name":"bacterial-type flagellum export apparatus","type":"exact"}],"termid":"GO:0120102"}


id: MONDO:0020234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete craniofacial anomaly with cataract (obsolete MONDO:0020234)","secondary_identifiers":["Orphanet:98650"],"termid":"MONDO:0020234","xrefs":{"Monarch":{"xref_id":"0020234"}}}


id: GO:0014748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tonic skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tonic skeletal muscle contraction","termid":"GO:0014746"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"tonic skeletal muscle contraction","termid":"GO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tonic skeletal muscle contraction","termid":"GO:0014748"}


id: GO:0050456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-cysteine + NAD+ = L-cystine + H+ + NADH.","definition_xrefs":["RHEA:20597","EC:1.8.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cystine reductase activity","secondary_identifiers":["KEGG_REACTION:R00892","MetaCyc:CYSTINE-REDUCTASE-NADH-RXN"],"synonyms":[{"name":"L-cysteine:NAD+ oxidoreductase","type":"related"},{"name":"NADH-dependent cystine reductase activity","type":"related"},{"name":"NADH2:L-cystine oxidoreductase","type":"related"},{"name":"NADH:L-cystine oxidoreductase activity","type":"related"},{"name":"cystine reductase (NADH) activity","type":"related"},{"name":"cystine reductase (NADH2)","type":"related"}],"termid":"GO:0050456"}


id: GO:0007294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a germarium-derived cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"oocyte fate determination","termid":"GO:0030716"},{"relation_name":"part_of","term_name":"germarium-derived oocyte differentiation","termid":"GO:0030706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived oocyte fate determination","secondary_identifiers":["GO:0016350"],"synonyms":[{"name":"maintenance of oocyte identity","type":"related"},{"name":"oocyte cell fate determination","type":"related"}],"termid":"GO:0007294"}


id: FYPO:0007718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal SMN complex assembly","synonyms":[{"name":"abnormal SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007718"}


id: PBO:0045751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein Barr virus integration site 1","termid":"PBO:0045751"}


id: FYPO:0003823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, producing inviable daughter cells, and in which the septum forms in a position that partitions both nuclei into one compartment, when a cell is exposed to hydroxyurea. Cell separation may or may not be completed.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoseptate vegetative cell with binucleate and anucleate compartments","termid":"FYPO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"septation following abnormal chromosome segregation, with binucleate and anucleate compartment formation during cellular response to hydroxyurea","synonyms":[{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation, with binucleate cell formation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0003823"}


id: PBO:0075852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2 interacting protein","termid":"PBO:0075852"}


id: MONDO:0015600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual deficit, Cilliers type is characterized by mild intellectual deficit associated with short stature, hypergonadotropic hypogonadism, microcephaly and mild facial dysmorphism (deep-set eyes, prominent supraorbital ridges, a high nasal bridge and large ears).","definition_xrefs":["Orphanet:163971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Cilliers type","secondary_identifiers":["SCTID:719013004","UMLS:C4305024","MEDGEN:930693","GARD:20054"],"synonyms":[{"name":"X-linked intellectual disability-microcephaly-testicular failure syndrome","type":"exact"}],"termid":"MONDO:0015600","xrefs":{"Monarch":{"xref_id":"0015600"}}}


id: PBO:0047882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q31.1)","termid":"PBO:0047882"}


id: GO:0060992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fungicide stimulus. Fungicides are chemicals used to kill fungi.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"},{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fungicide","termid":"GO:0060992"}


id: PBO:0113337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable but shows increased loss of mitochondrial genome and synthetic interaction with prohibitin (phb1); contains an intron; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; localizes to the peroxisome in glucose; YER093C-A has a paralog, YBL059W, that arose from the whole genome duplication","termid":"PBO:0113337"}


id: FYECO:0000005
data:
  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aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga6delta wee1-as8(T582G aa)","display_uniquename":"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"sdh3delta":{"display_name":"sdh3delta","display_uniquename":"sdh3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03920:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]},"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_00118","SJAG_04574","SJAG_02266","SJAG_00028","SJAG_03596","SJAG_01680","SJAG_01143","SJAG_03118","SJAG_04522","SJAG_04280","SJAG_02392","SJAG_02668","SJAG_01205","SJAG_03689"],"name":"standard temperature","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:23873862":null,"PMID:24184107":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:36695178":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04284","SJAG_04671","SJAG_02763","SJAG_04697","SJAG_01680","SJAG_03920","SJAG_00028","SJAG_03449","SJAG_04280","SJAG_04061","SJAG_04287","SJAG_02527","SJAG_00601","SJAG_02796","SJAG_04574","SJAG_01753","SJAG_03689","SJAG_04312","SJAG_03356","SJAG_00364","SJAG_03720","SJAG_02409","SJAG_02860","SJAG_01143","SJAG_05242","SJAG_02621","SJAG_01205","SJAG_04843","SJAG_00118","SJAG_00514","SJAG_04883","SJAG_01355","SJAG_01410","SJAG_01605","SJAG_02594","SJAG_03581","SJAG_03916","SJAG_04522","SJAG_00409","SJAG_00429"],"single_locus_genotype_uniquenames":["scd1delta","mid1delta","dcr1delta","tel1delta","mrc1delta","rga4delta","rad9delta","pka1delta","chp1delta","wcs1delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","rdp1delta","wcs2delta","ned1delta","rad26delta","cox6delta","fum1delta","rad51delta","gpd1delta","mid2delta","stc1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","gef1delta","crb2delta","clr4delta","gms1delta","arb1delta","rga6delta","mdh1delta","chk1delta","rad3delta","sdh3delta","cds1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","ago1delta","arb2delta","ptp4delta","rip1delta","chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"25 degrees Celsius","type":"narrow"},{"name":"26 degrees Celsius","type":"narrow"},{"name":"27 degrees Celsius","type":"narrow"},{"name":"28 degrees Celsius","type":"narrow"},{"name":"29 degrees Celsius","type":"narrow"},{"name":"30 degrees Celsius","type":"narrow"},{"name":"31 degrees Celsius","type":"narrow"},{"name":"32 degrees Celsius","type":"narrow"},{"name":"normal temperature","type":"exact"}],"termid":"FYECO:0000005","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000015":null,"FYECO:0000081":null,"FYECO:0000102":null,"FYECO:0000103":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: MONDO:0005221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the transitional epithelium of the renal pelvis. It is associated with tobacco use and usually presents with gross or microscopic hematuria. Urothelial carcinomas of the renal pelvis are usually of higher grade and higher stage compared to bladder urothelial carcinomas.","definition_xrefs":["NCIT:C7355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal pelvis carcinoma","termid":"MONDO:0005519"},{"relation_name":"is_a","term_name":"renal pelvis/ureter urothelial carcinoma","termid":"MONDO:0020654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"renal pelvis urothelial carcinoma","secondary_identifiers":["MEDGEN:1648131","SCTID:408642003","DOID:5974","UMLS:C4087468","ICD9:189.0","EFO:0003017"],"synonyms":[{"name":"kidney renal pelvis urothelial cancer","type":"exact"},{"name":"renal pelvis transitional cell carcinoma","type":"exact"},{"name":"renal pelvis urothelial cancer","type":"exact"},{"name":"renal pelvis urothelial carcinoma","type":"exact"},{"name":"transitional cell carcinoma of renal pelvis","type":"exact"},{"name":"transitional cell carcinoma of the renal pelvis","type":"exact"},{"name":"urothelial cell carcinoma of renal pelvis","type":"exact"},{"name":"urothelial cell carcinoma of the renal pelvis","type":"exact"}],"termid":"MONDO:0005221","xrefs":{"Monarch":{"xref_id":"0005221"}}}


id: MONDO:0015484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cysticercosis is a parasitic infectious disease characterized by cyst formation in the target tissue of Taenia solium (tapeworm) parasite larvae ingested via the feces of a human with a tapeworm (human-to-human fecal-oral transmission) leading to variable clinical manifestations in muscle, the brain, spinal cord, and eyes. Infection of muscle tissue is generally asymptomatic. Cyst development in the brain and spinal cord is known as neurocysticercosis (NCC) and may cause seizures and headache. NCC can follow a serious course and may be life-threatening. Severe cases of cysticercosis are treated with albendazole and anti-inflammatory drugs.","definition_xrefs":["Orphanet:1560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taeniasis","termid":"MONDO:0000367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cysticercosis","secondary_identifiers":["NCIT:C34520","NORD:1027","SCTID:59051007","ICD9:123.1","UMLS:C0010678","EFO:0007231","DOID:10079","MESH:D003551","GARD:8194","ICD10CM:B69","icd11.foundation:1324863907","MedDRA:10011775","MEDGEN:4122"],"synonyms":[{"name":"intestinal taenia solium infection","type":"exact"},{"name":"neurocysticercosis","type":"related"},{"name":"pork tapeworm infection","type":"exact"},{"name":"tapeworm infection: [intestinal taenia solium] or [pork]","type":"exact"},{"name":"tapeworm infection: intestinal taenia solum","type":"exact"},{"name":"tapeworm infection: pork","type":"exact"},{"name":"tenia solium infectious disease","type":"exact"}],"termid":"MONDO:0015484","xrefs":{"Monarch":{"xref_id":"0015484"}}}


id: PR:Q09787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.09","synonyms":[{"name":"Spom972h-SPAC13G6.09","type":"exact"}],"termid":"PR:Q09787"}


id: FYPO:0003227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the long cytoplasmic microtubules characteristic of interphase cells remain present after mitosis begins and the mitotic spindle forms.","definition_xrefs":["PMID:18799626","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"interphase microtubules present during mitosis","synonyms":[{"name":"interphase cytoplasmic microtubules present during mitosis","type":"exact"},{"name":"interphase microtubules present during M phase of mitotic cell cycle","type":"related"},{"name":"interphase microtubules present during mitosis during vegetative growth","type":"exact"},{"name":"interphase microtubules present during mitotic M phase","type":"related"},{"name":"interphase microtubules present during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003227"}


id: PBO:0041305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 15","termid":"PBO:0041305"}


id: PBO:0048465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-cysteine ligase catalytic subunit","termid":"PBO:0048465"}


id: MONDO:0019122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic acute eosinophilic pneumonia (IAEP) is an eosinophilic pneumonia of undetermined etiology that is characterized by acute febrile hypoxic respiratory failure associated with diffuse radiographic infiltrates and pulmonary eosinophilia, but without concurring allergy or infection.","definition_xrefs":["Orphanet:724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary eosinophilia","termid":"MONDO:0004802"},{"relation_name":"is_a","term_name":"idiopathic hypereosinophilic syndrome","termid":"MONDO:0011895"},{"relation_name":"is_a","term_name":"idiopathic eosinophilic pneumonia","termid":"MONDO:0015927"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"idiopathic acute eosinophilic pneumonia","secondary_identifiers":["GARD:519","SCTID:64936001","UMLS:C4518469","NCIT:C35301","NORD:728","icd11.foundation:1455309767","DOID:9503","MEDGEN:1371970"],"synonyms":[{"name":"Acute Eosinophilic Pneumonia","type":"exact"},{"name":"IAEP","type":"exact"},{"name":"Loeffler syndrome","type":"exact"},{"name":"Loeffler's pneumonia","type":"exact"},{"name":"Loffler syndrome","type":"exact"},{"name":"Loffler's syndrome","type":"exact"},{"name":"Löffler syndrome","type":"exact"},{"name":"pulmonary infiltrates with eosinophilia","type":"related"}],"termid":"MONDO:0019122","xrefs":{"Monarch":{"xref_id":"0019122"}}}


id: PBO:0078052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 42","termid":"PBO:0078052"}


id: MONDO:0015599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atopic keratoconjunctivitis is a rare and chronic allergic disease of the cornea and conjunctiva occurring in all age groups characterized by severe itching and burning sensation, conjunctival injection, photophobia and edema with serious cases leading to ulceration of the cornea which can result in blindness. It is often associated with atopic dermatitis.","definition_xrefs":["Orphanet:163934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"atopic keratoconjunctivitis","secondary_identifiers":["icd11.foundation:1941631830","UMLS:C1274788","GARD:20053","ICD9:370.49","MEDGEN:698110","MedDRA:10069664","ICD10CM:H16.2","SCTID:403434009"],"termid":"MONDO:0015599","xrefs":{"Monarch":{"xref_id":"0015599"}}}


id: PBO:0086225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that functions in mitochondrial copper homeostasis; mitochondrial intermembrane space protein; essential for functional cytochrome oxidase expression; homologous to Cox17p; contains twin cysteine-x9-cysteine motifs","termid":"PBO:0086225"}


id: PBO:0066363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RD3 like","termid":"PBO:0066363"}


id: GO:0032835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the vertebrate kidney. The glomerulus is part of the nephron and is restricted to one body segment.","definition_xrefs":["GOC:mah","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus development","synonyms":[{"name":"glomerular development","type":"exact"}],"termid":"GO:0032835"}


id: MONDO:0021811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute mountain sickness is characterized by altitude sickness that affects otherwise healthy persons, develops within hours after arriving at altitude, and results in functional impairment from symptoms that may include headache, anorexia, nausea, vomiting, dizziness, fatigue, and sleep disturbances.","definition_xrefs":["PMID:11450659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altitude sickness","termid":"MONDO:0006625"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute mountain sickness","secondary_identifiers":["ICD9:993.2","SCTID:78590007","MEDGEN:536790","UMLS:C0238284"],"synonyms":[{"name":"Mountain sickness","type":"related"},{"name":"acosta's disease","type":"related"},{"name":"acute mountain sickness","type":"exact"},{"name":"altitude anoxia","type":"related"},{"name":"altitude sickness","type":"related"},{"name":"high altitude cerebral edema","type":"related"},{"name":"high altitude cerebral oedema","type":"related"},{"name":"high altitude pulmonary edema","type":"related"},{"name":"high altitude pulmonary oedema","type":"related"},{"name":"soroche","type":"related"}],"termid":"MONDO:0021811","xrefs":{"Monarch":{"xref_id":"0021811"}}}


id: MONDO:0016630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated delta-storage pool disease is a rare, isolated, constitutional thrombocytopenia disorder characterized by defective formation and/or malfunction of platelet dense granules, as well as melanosomes in skin cells, resulting in variable manifestations ranging from mild bleeding and easy bruising to moderate mucous/cutaneous hemorrhagic diathesis and bleeding complications after surgery.","definition_xrefs":["Orphanet:248340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"isolated delta-storage pool disease","secondary_identifiers":["GARD:20674","icd11.foundation:2133567182"],"synonyms":[{"name":"isolated delta-SPD","type":"exact"},{"name":"isolated dense-SPD","type":"exact"},{"name":"isolated dense-storage pool disease","type":"exact"}],"termid":"MONDO:0016630","xrefs":{"Monarch":{"xref_id":"0016630"}}}


id: GO:0035229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of glutamate-cysteine ligase, typically by lowering its sensitivity to inhibition by glutathione and by increasing its affinity for glutamate.","definition_xrefs":["PMID:12954617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutamate-cysteine ligase activity","synonyms":[{"name":"activation of glutamate-cysteine ligase activity","type":"narrow"},{"name":"stimulation of glutamate-cysteine ligase activity","type":"narrow"},{"name":"up regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"up-regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"upregulation of glutamate-cysteine ligase activity","type":"exact"}],"termid":"GO:0035229"}


id: PBO:0059877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 14","termid":"PBO:0059877"}


id: PR:P87059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermembrane space import and assembly protein 40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21622:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space import and assembly protein 40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.11c","secondary_identifiers":["UniProtKB:P87059"],"synonyms":[{"name":"SPAC57A10.11c","type":"related"},{"name":"Spom972h-CHCHD4","type":"exact"},{"name":"mitochondrial import inner membrane translocase TIM40 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tim40","type":"related"}],"termid":"PR:P87059"}


id: GO:1902521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an etoposide stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23648065","GOC:dw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucoside","termid":"GO:1904631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to etoposide","termid":"GO:1902521"}


id: MONDO:0003158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating malignant tumor characterized by the presence of atypical cells with myoepithelial differentiation. Representative examples include malignant breast myoepithelioma and salivary gland myoepithelial carcinoma.","definition_xrefs":["NCIT:C7596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoepithelial tumor","termid":"MONDO:0002380"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant myoepithelioma","secondary_identifiers":["ONCOTREE:STMYEC","UMLS:C0334699","ICDO:8982/3","DOID:4838","MEDGEN:90822"],"synonyms":[{"name":"malignant myoepithelioma","type":"exact"},{"name":"myoepithelial carcinoma","type":"exact"},{"name":"myoepithelioma carcinoma","type":"related"},{"name":"myoepithelioma, malignant","type":"exact"},{"name":"soft tissue myoepithelial carcinoma","type":"related"}],"termid":"MONDO:0003158","xrefs":{"Monarch":{"xref_id":"0003158"}}}


id: PBO:0108685
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGEF Sec2","termid":"PBO:0108685"}


id: SO:0002143
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2B modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2B_acetylation_site","synonyms":[{"name":"H2Bac","type":"exact"},{"name":"histone 2B acetylation site","type":"exact"}],"termid":"SO:0002143"}


id: PBO:0070470
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id: GO:0005131
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id: PBO:0002029
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id: PBO:0065544
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id: GO:0051429
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id: PATO:0000240
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id: PBO:0043142
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id: GO:1900928
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id: PBHQ:004
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id: PBO:0051221
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id: PBO:0056501
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id: GO:0031817
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id: PBO:0085866
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id: PBO:0040790
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id: GO:0070057
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id: PBO:0081980
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id: PBO:0011994
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id: MONDO:0006025
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id: GO:0102298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-selenocysteine + O-phosphonato-L-homoserine = hydrogenphosphate + L-selenocystathionine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete selenocystathione synthase activity (obsolete GO:0102298)","termid":"GO:0102298"}


id: PBO:0038443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenesis associated Mth938 domain containing","termid":"PBO:0038443"}


id: PBO:0060811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit V3","termid":"PBO:0060811"}


id: PBO:0059173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I-related","termid":"PBO:0059173"}


id: PBO:0051381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6D-41 (non-functional)","termid":"PBO:0051381"}


id: PBO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase Trm13 (predicted)","termid":"PBO:0001722"}


id: PBO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HbrB family protein","termid":"PBO:0001537"}


id: PBO:0083288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant displays shortened telomeres; partially overlaps the uncharacterized ORF YMR031C","termid":"PBO:0083288"}


id: PBO:0070333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 5","termid":"PBO:0070333"}


id: GO:0071765
data:
  {"annotated_genes":["SJAG_03491","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70234,91100],"is_not":false,"summary":null,"term":"GO:0071765"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03491":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear inner membrane organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear inner membrane organisation","type":"exact"},{"name":"nuclear inner membrane organization and biogenesis","type":"related"}],"termid":"GO:0071765","terms_by_termid":{"GO:0071765":null}}


id: PATO:0001892
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality of having decreased odor.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"odorous","termid":"PATO:0001331"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased odor","termid":"PATO:0001892"}


id: MONDO:0005914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the picornaviridae.","definition_xrefs":["MESH:D010850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Picornaviridae infectious disease","secondary_identifiers":["EFO:0007438","UMLS:C0031887","MEDGEN:19308"],"synonyms":[{"name":"Picornaviridae infection","type":"exact"},{"name":"infections, Picornaviridae","type":"related"}],"termid":"MONDO:0005914","xrefs":{"Monarch":{"xref_id":"0005914"}}}


id: PR:Q09702
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nrd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of differentiation 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.11","synonyms":[{"name":"Spom972h-nrd1","type":"exact"},{"name":"multicopy suppressor of sporulation protein msa2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09702"}


id: PBO:0061580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal Xaa-Pro-Lys N-methyltransferase 1","termid":"PBO:0061580"}


id: GO:0070935
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  {"annotated_genes":["SJAG_04946","SJAG_04825","SJAG_03696","SJAG_02573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78504,78571,89942,99880],"is_not":false,"summary":null,"term":"GO:0070935"}]},"cv_name":"biological_process","definition":"An mRNA stabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.","definition_xrefs":["GOC:mah","PMID:19029303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA stabilization","termid":"GO:0048255"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03696":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"3'-UTR-mediated mRNA stabilization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:0070935","terms_by_termid":{"GO:0070935":null}}


id: MONDO:0003718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occlusion precerebral artery","secondary_identifiers":["UMLS:C0265090","ICD9:433.3","SCTID:28790007","ICD9:433","EFO:0009677","DOID:5976","ICD9:433.81","MEDGEN:539069","ICD9:433.80","ICD9:433.9"],"synonyms":[{"name":"occlusion and stenosis of multiple and bilateral precerebral arteries","type":"related"},{"name":"occlusion and stenosis of precerebral artery","type":"related"}],"termid":"MONDO:0003718","xrefs":{"Monarch":{"xref_id":"0003718"}}}


id: PBO:0029684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_iron_ion_starvation","termid":"PBO:0029684"}


id: GO:0004399
data:
  {"annotated_genes":["SJAG_01137"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79923],"is_not":false,"summary":null,"term":"GO:0004399"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-histidinol + 2 NAD+ = 3 H+ + L-histidine + 2 NADH.","definition_xrefs":["RHEA:20641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histidinol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-8001","EC:1.1.1.23"],"termid":"GO:0004399","terms_by_termid":{"GO:0004399":null}}


id: PBO:0057809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-2","termid":"PBO:0057809"}


id: PBO:0056931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase pseudogene 3","termid":"PBO:0056931"}


id: PBO:0029050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029050"}


id: PBO:0054782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2195","termid":"PBO:0054782"}


id: PBO:0048848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadotropin releasing hormone 1","termid":"PBO:0048848"}


id: GO:1905935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell fate determination.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bhm","PMID:25793578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"positively_regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate determination","synonyms":[{"name":"activation of cell fate determination","type":"narrow"},{"name":"up regulation of cell fate determination","type":"exact"},{"name":"up-regulation of cell fate determination","type":"exact"},{"name":"upregulation of cell fate determination","type":"exact"}],"termid":"GO:1905935"}


id: PBO:0069165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 417, pseudogene","termid":"PBO:0069165"}


id: MONDO:1011801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 polysaccharide storage myopathy, non-human animal","secondary_identifiers":["OMIA:001537"],"termid":"MONDO:1011801","xrefs":{"Monarch":{"xref_id":"1011801"}}}


id: MONDO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal cystitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute cystitis","termid":"MONDO:0001650"},{"relation_name":"is_a","term_name":"gonococcal cystitis","termid":"MONDO:0021160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal cystitis","secondary_identifiers":["SCTID:24868007","ICD9:098.11","UMLS:C0153191","MEDGEN:509193","DOID:13690"],"synonyms":[{"name":"acute gonorrhea of bladder","type":"exact"},{"name":"acute gonorrhoea of bladder","type":"exact"},{"name":"gonococcal cystitis (acute)","type":"exact"},{"name":"gonococcal cystitis, acute","type":"exact"}],"termid":"MONDO:0001777","xrefs":{"Monarch":{"xref_id":"0001777"}}}


id: RO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"RO:0002022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulated_by","termid":"RO:0002024"}


id: PBO:0017462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_that_occurs_in","termid":"PBO:0017462"}


id: MONDO:0016593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of ataxia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebellar ataxia","termid":"MONDO:0000437"},{"relation_name":"is_a","term_name":"atactic disorder","termid":"MONDO:0100308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired ataxia","secondary_identifiers":["MEDGEN:927781","GARD:20656","icd11.foundation:71197968","Orphanet:247242","SCTID:722968003","UMLS:C4302112"],"synonyms":[{"name":"acquired ataxia","type":"exact"}],"termid":"MONDO:0016593","xrefs":{"Monarch":{"xref_id":"0016593"}}}


id: PBO:0040353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 2","termid":"PBO:0040353"}


id: MONDO:0859289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal dysmotility syndrome","secondary_identifiers":["OMIM:620045","UMLS:C5774219","MEDGEN:1823992"],"termid":"MONDO:0859289","xrefs":{"Monarch":{"xref_id":"0859289"}}}


id: PBO:0003676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, Atf-CREB family Atf1","termid":"PBO:0003676"}


id: PBO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase (predicted)","termid":"PBO:0003086"}


id: PBO:0063063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PANK2 antisense RNA 1","termid":"PBO:0063063"}


id: GO:0102408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanedioyl-CoA + sn-glycerol 3-phosphate = coenzyme A + sn-2-C16:0-DCA-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (obsolete GO:0102408)","termid":"GO:0102408"}


id: MONDO:0010329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 77","secondary_identifiers":["DOID:0112039","MESH:C564511","MEDGEN:335199","GARD:22678","UMLS:C1845499","OMIM:300454"],"synonyms":[{"name":"MRX77","type":"exact"},{"name":"intellectual disability, X-linked 77","type":"exact"},{"name":"mental retardation, X-linked 77","type":"related"},{"name":"mental retardation, X-linked 77, X-linked recessive","type":"exact"}],"termid":"MONDO:0010329","xrefs":{"Monarch":{"xref_id":"0010329"}}}


id: GO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of branched chain amino acids to produce branched chain alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanol, 2-methylbutanol, or 2-methylpropanol, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to alcohol via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to alcohol via Ehrlich pathway","type":"exact"}],"termid":"GO:0000950"}


id: GO:0033492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving esculetin, 6,7-dihydroxycoumarin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"esculetin metabolic process","synonyms":[{"name":"esculetin metabolism","type":"exact"}],"termid":"GO:0033492"}


id: PBO:0028937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-fluoroorotic_acid","termid":"PBO:0028937"}


id: GO:0004340
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69784,75905],"is_not":false,"summary":null,"term":"GO:0004340"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose-6-phosphate.","definition_xrefs":["EC:2.7.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLUCOKIN-RXN","Reactome:R-HSA-5621918","RHEA:17825","Reactome:R-HSA-5621888","Reactome:R-HSA-70420"],"synonyms":[{"name":"ATP:D-glucose 6-phosphotransferase activity","type":"related"},{"name":"glucokinase (phosphorylating)","type":"related"},{"name":"glucose kinase activity","type":"related"}],"termid":"GO:0004340","terms_by_termid":{"GO:0004340":null}}


id: GO:0043327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of 3',5'-cAMP.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to cAMP","synonyms":[{"name":"chemotaxis to 3',5' cAMP","type":"exact"},{"name":"chemotaxis to 3',5'-cAMP","type":"exact"},{"name":"chemotaxis to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"chemotaxis to cyclic AMP","type":"exact"}],"termid":"GO:0043327"}


id: PBO:0063288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 2","termid":"PBO:0063288"}


id: PBO:0017420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contains","termid":"PBO:0017420"}


id: GO:0061404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to increased salt (obsolete GO:0061404)","termid":"GO:0061404"}


id: MONDO:0009114
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86749,86750],"is_not":false,"summary":null,"term":"MONDO:0009114"}]},"cv_name":"mondo","definition":"A disorder of carbohydrate absorption and transport caused by autosomal recessive mutation of the SI gene, characterized by malabsorption of sucrose and maltose.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disaccharidase deficiency","termid":"MONDO:0004905"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"congenital sucrase-isomaltase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:35122","icd11.foundation:1817406536","MedDRA:10066387","SCTID:78373000","MEDGEN:220924","UMLS:C1283620","DOID:0111633","ICD9:271.3","GARD:6183","MESH:C538139","NANDO:2200908","NCIT:C128190","NORD:1056","OMIM:222900"],"synonyms":[{"name":"CSID","type":"exact"},{"name":"SI deficiency","type":"related"},{"name":"congenital sucrase-isomaltase deficiency","type":"exact"},{"name":"congenital sucrase-isomaltose malabsorption","type":"exact"},{"name":"congenital sucrose intolerance","type":"exact"},{"name":"congenital sucrose malabsorption","type":"related"},{"name":"congenital sucrose-isomaltase intolerance","type":"related"},{"name":"congenital sucrose-isomaltase malabsorption","type":"related"},{"name":"disaccharide intolerance","type":"exact"},{"name":"disaccharide intolerance 1","type":"related"},{"name":"disaccharide intolerance i","type":"related"},{"name":"disaccharide intolerance, 1","type":"related"},{"name":"genetic sucrase-isomaltose malabsorption","type":"exact"},{"name":"intestinal sucrase-a-dextrinase deficiency","type":"related"},{"name":"invertase deficiency","type":"related"},{"name":"sucrase-alpha-dextrinase deficiency","type":"related"},{"name":"sucrase-isomaltase deficiency","type":"exact"},{"name":"sucrase-isomaltase deficiency, congenital","type":"related"},{"name":"sucrose intolerance congenital","type":"related"},{"name":"sucrose intolerance, congenital","type":"related"},{"name":"sucrose isomaltose enzyme deficiency","type":"related"},{"name":"sucrose-isomaltase malabsorption, congenital","type":"related"},{"name":"sucrose-isomaltose malabsorption, congenital","type":"related"}],"termid":"MONDO:0009114","terms_by_termid":{"MONDO:0009114":null},"xrefs":{"Monarch":{"xref_id":"0009114"}}}


id: PBO:0074651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 40B","termid":"PBO:0074651"}


id: PBO:0090353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine/pyridoxine/pyridoxal transmembrane transporter","termid":"PBO:0090353"}


id: MONDO:1010665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Evans syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Evans syndrome, non-human animal","termid":"MONDO:1010082"},{"relation_name":"is_a","term_name":"thrombocytopenia, horse","termid":"MONDO:1010661"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evans syndrome, horse","secondary_identifiers":["OMIA:001286-9796"],"termid":"MONDO:1010665","xrefs":{"Monarch":{"xref_id":"1010665"}}}


id: PBO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Leyden crystal protein pseudogene 2","termid":"PBO:0043240"}


id: GO:1990433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA-binding transcription factor complex consisting of CSL and mastermind proteins in complex with the cleaved, intracellular domain of Notch. It is required for both repression and activation of Notch target genes.","definition_xrefs":["GOC:dos","PMID:16530045","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CSL-Notch-Mastermind transcription factor complex","synonyms":[{"name":"CSL-NotchIC-MASTERMIND complex","type":"exact"}],"termid":"GO:1990433"}


id: GO:0035976
data:
  {"annotated_genes":["SJAG_02311","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92504,107764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990243"}]},"cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex composed of proteins from the c-Fos, c-Jun, activating transcription factor (ATF) or JDP families. The subunits contain a basic leucine zipper (bZIP) domain that is essential for dimerization and DNA binding. Jun-Fos heterodimers bind preferentially to a heptamer consensus sequence (TPA responsive element (TRE)), whereas Jun-ATF dimers bind the cyclic AMP responsive element (CRE) to regulate transcription of target genes.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:20060892","PMID:9069263","Wikipedia:AP-1_transcription_factor","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"transcription factor AP-1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AP-1 complex","type":"exact"},{"name":"AP1 complex","type":"exact"},{"name":"Activating protein 1 complex","type":"exact"},{"name":"transcription factor AP1 complex","type":"exact"}],"termid":"GO:0035976","terms_by_termid":{"GO:1990243":null}}


id: PBO:0085327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol/phosphatidylcholine transfer protein; involved in regulating PtdIns, PtdCho, and ceramide metabolism, products of which regulate intracellular transport and UPR; has a role in localization of lipid raft proteins; functionally homologous to mammalian PITPs; SEC14 has a paralog, YKL091C, that arose from the whole genome duplication","termid":"PBO:0085327"}


id: GO:0052163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont modulates the frequency, rate or extent of the production of nitric oxide as part of the innate immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont defense to host-produced nitric oxide (obsolete GO:0052163)","synonyms":[{"name":"defense response to host innate immune response nitric oxide production","type":"narrow"},{"name":"evasion or tolerance by organism of host NO","type":"exact"},{"name":"evasion or tolerance by organism of host nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of host-produced NO","type":"exact"},{"name":"evasion or tolerance by organism of host-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of nitric oxide produced by other organism involved in symbiotic interaction","type":"broad"},{"name":"evasion or tolerance by symbiont of host-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance of NO produced by host in response to organism","type":"exact"},{"name":"evasion or tolerance of nitric oxide produced by host in response to organism","type":"exact"},{"name":"modulation by organism of defense-related host NO production","type":"exact"},{"name":"modulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"response to defense-related host nitric oxide production","type":"related"},{"name":"response to defense-related nitric oxide production by other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052163"}


id: PBO:0040665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 12","termid":"PBO:0040665"}


id: FYPO:0005112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin-specific protease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal ubiquitin-specific protease activity","termid":"FYPO:0005111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased ubiquitin-specific protease activity","synonyms":[{"name":"reduced ubiquitin-specific protease activity","type":"exact"}],"termid":"FYPO:0005112"}


id: GO:1903961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anion transmembrane transport.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transmembrane transport","termid":"GO:0034767"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic anion transport","termid":"GO:1903793"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"positively_regulates","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of anion transmembrane transport","synonyms":[{"name":"activation of anion transmembrane transport","type":"narrow"},{"name":"up regulation of anion transmembrane transport","type":"exact"},{"name":"up-regulation of anion transmembrane transport","type":"exact"},{"name":"upregulation of anion transmembrane transport","type":"exact"}],"termid":"GO:1903961"}


id: GO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:add","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytolysis by symbiont of host cells (obsolete GO:0001898)","synonyms":[{"name":"regulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001898"}


id: GO:0044778
data:
  {"annotated_genes":["SJAG_00364","SJAG_02771","SJAG_04287","SJAG_03026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78588],"is_not":false,"summary":null,"term":"GO:0044778"},{"annotations":[115868,91186,106413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"}]},"cv_name":"biological_process","definition":"A signal transduction process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA during meiosis. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and ends with signal transduction.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"},{"relation_name":"is_a","term_name":"meiotic cell cycle checkpoint signaling","termid":"GO:0033313"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"meiotic DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic DNA integrity checkpoint","type":"exact"}],"termid":"GO:0044778","terms_by_termid":{"GO:0033315":null,"GO:0044778":null}}


id: PBO:0047313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 2","termid":"PBO:0047313"}


id: PBO:0017820
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caffeine Induced cell Death","termid":"PBO:0017820"}


id: PBO:0048759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2A pseudogene 2","termid":"PBO:0048759"}


id: FYPO:0004741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of filamentous actin (F-actin) in the actomyosin contractile ring is normal (i.e. indistinguishable from wild type) during mitotic anaphase B.","definition_xrefs":["PomBase:mah","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring","termid":"FYPO:0004740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal F-actin level in actomyosin contractile ring during anaphase B","synonyms":[{"name":"normal F-actin level in actomyosin contractile ring during anaphase B during mitotic cell cycle","type":"related"},{"name":"normal F-actin level in actomyosin contractile ring during anaphase B during vegetative growth","type":"exact"},{"name":"normal F-actin level in contractile ring during anaphase B","type":"exact"},{"name":"normal F-actin level in cytokinetic contractile ring during anaphase B","type":"exact"},{"name":"normal abundance of actin in actomyosin contractile ring in anaphase B","type":"exact"},{"name":"normal actomyosin contractile ring F-actin level during anaphase B","type":"exact"},{"name":"normal filamentous actin level in actomyosin contractile ring during anaphase B","type":"exact"}],"termid":"FYPO:0004741"}


id: GO:0031946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"regulates","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"}


id: PBO:0043374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 4","termid":"PBO:0043374"}


id: PBO:0049793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCK proto-oncogene, Src family tyrosine kinase","termid":"PBO:0049793"}


id: PBO:0004780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn1","termid":"PBO:0004780"}


id: PBO:0059460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSC antisense RNA 1","termid":"PBO:0059460"}


id: PBO:0039414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome chromosome region","termid":"PBO:0039414"}


id: GO:0010914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of sterigmatocystin biosynthesis. Sterigmatocystin biosynthetic processes are the chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of sterigmatocystin biosynthetic process","termid":"GO:0010914"}


id: GO:0031201
data:
  {"annotated_genes":["SJAG_03848","SJAG_02586","SJAG_04739","SJAG_00171","SJAG_04909","SJAG_04023","SJAG_04513","SJAG_03347","SJAG_03536","SJAG_00557","SJAG_03552","SJAG_02204","SJAG_04978","SJAG_00826","SJAG_02241","SJAG_04701","SJAG_01324"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71714,71940,73554,75727,75892,76163,76278,77484,77754,90323,93399,97872,99297,100866,109453,112481,117362],"is_not":false,"summary":null,"term":"GO:0031201"}]},"cv_name":"cellular_component","definition":"A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25.","definition_xrefs":["PMID:10872468","PMID:19450911","GOC:bhm","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00557":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_02204":null,"SJAG_02241":null,"SJAG_02586":null,"SJAG_03347":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04701":null,"SJAG_04739":null,"SJAG_04909":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"SNARE complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031201","terms_by_termid":{"GO:0031201":null}}


id: GO:0019745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentacyclic triterpenoid biosynthetic process","synonyms":[{"name":"pentacyclic triterpenoid anabolism","type":"exact"},{"name":"pentacyclic triterpenoid biosynthesis","type":"exact"},{"name":"pentacyclic triterpenoid formation","type":"exact"},{"name":"pentacyclic triterpenoid synthesis","type":"exact"}],"termid":"GO:0019745"}


id: MONDO:1011234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in Campbell's desert hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, Campbell's desert hamster","secondary_identifiers":["OMIA:000649-47665"],"termid":"MONDO:1011234","xrefs":{"Monarch":{"xref_id":"1011234"}}}


id: MONDO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adult-onset movement disorder characterized by bradykinesia, dysarthria and muscle rigidity.","definition_xrefs":["Orphanet:228169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striatonigral degeneration","termid":"MONDO:0003122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"striatal degeneration, autosomal dominant","secondary_identifiers":["MEDGEN:322971","MESH:C563783","GARD:17146","OMIMPS:609161","UMLS:C1836694"],"synonyms":[{"name":"ADSD","type":"exact"},{"name":"autosomal dominant striatal neurodegeneration","type":"exact"}],"termid":"MONDO:0000211","xrefs":{"Monarch":{"xref_id":"0000211"}}}


id: GO:0150195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances (e.g. macromolecules, small molecules, ions) through the blood-cerebrospinal fluid barrier.","definition_xrefs":["PMID:21349151","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"transport across blood-cerebrospinal fluid barrier","synonyms":[{"name":"transport across BCSFB","type":"exact"},{"name":"transport across blood-CSF barrier","type":"exact"},{"name":"transport across blood/CSF barrier","type":"exact"},{"name":"transport across blood/cerebrospinal fluid barrier","type":"exact"}],"termid":"GO:0150195"}


id: GO:0005906
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete clathrin adaptor (obsolete GO:0005906)","synonyms":[{"name":"adaptin","type":"related"},{"name":"clathrin adaptor","type":"exact"}],"termid":"GO:0005906"}


id: PBO:0047830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 intronic transcript 1","termid":"PBO:0047830"}


id: PR:Q9P7D9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsv1 gene.","definition_xrefs":["UniProtKB:Q9P7D9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein rsv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.09","synonyms":[{"name":"Spom972h-rsv1","type":"exact"},{"name":"required for stationary phase viability protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7D9"}


id: GO:0051778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ent-7-alpha-hydroxykaurenoate + NADPH + H+ + O2 = gibberellin 12-aldehyde + NADP+ + 2 H2O. This is the second of three successive reactions resulting in the oxidation of ent-kaurenoate (ent-kaurenoic acid) to gibberellin 12 (GA12).","definition_xrefs":["EC:1.14.13.79","MetaCyc:RXN1F-160"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-7-alpha-hydroxykaurenoate oxidase activity (obsolete GO:0051778)","termid":"GO:0051778"}


id: GO:0099606
data:
  {"annotated_genes":["SJAG_04745","SJAG_04884"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94531,109707],"is_not":false,"summary":null,"term":"GO:0099606"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules. This process is part of mitotic metaphase plate congression.","definition_xrefs":["PMID:26705896","GOC:dos","PMID:26258632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04745":null,"SJAG_04884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"microtubule plus-end directed mitotic chromosome migration","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"plus-end directed chromosome gliding","type":"exact"}],"termid":"GO:0099606","terms_by_termid":{"GO:0099606":null}}


id: GO:0006906
data:
  {"annotated_genes":["SJAG_01324","SJAG_04739","SJAG_03670","SJAG_00430","SJAG_01633","SJAG_03536","SJAG_03347","SJAG_02241","SJAG_03552","SJAG_00380","SJAG_03889","SJAG_02315","SJAG_04978","SJAG_03848","SJAG_04513","SJAG_05184","SJAG_01379","SJAG_03403","SJAG_00826","SJAG_00204","SJAG_00171","SJAG_00557","SJAG_02587","SJAG_04023","SJAG_01697"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71713,75891,76277,77483,77753,90332,97876,100639,100869,109457,112485,117322,117367],"is_not":false,"summary":null,"term":"GO:0006906"},{"annotations":[74291,76922,99299,79482,70885,99501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[95708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[75212],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[75728,73555,57526,77395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"Fusion of the membrane of a transport vesicle with its target membrane.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"vesicle fusion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006906","terms_by_termid":{"GO:0006906":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null}}


id: PBO:0071198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 39","termid":"PBO:0071198"}


id: PBO:0057475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 593","termid":"PBO:0057475"}


id: GO:0008689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinone-9 = S-adenosyl-L-homocysteine + ubiquinone-9.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinone-9 3-O-methyltransferase activity (obsolete GO:0008689)","termid":"GO:0008689"}


id: PBO:0028240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus","termid":"PBO:0028240"}


id: GO:1902185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shoot apical meristem development.","definition_xrefs":["GOC:TermGenie","PMID:21496644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of shoot apical meristem development","termid":"GO:1902183"},{"relation_name":"positively_regulates","term_name":"shoot apical meristem development","termid":"GO:1902182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of shoot apical meristem development","synonyms":[{"name":"activation of SAM development","type":"exact"},{"name":"activation of primary shoot meristem development","type":"related"},{"name":"activation of promeristem development","type":"broad"},{"name":"activation of shoot apical meristem development","type":"narrow"},{"name":"positive regulation of SAM development","type":"exact"},{"name":"positive regulation of primary shoot meristem development","type":"related"},{"name":"positive regulation of promeristem development","type":"broad"},{"name":"up regulation of SAM development","type":"exact"},{"name":"up regulation of primary shoot meristem development","type":"related"},{"name":"up regulation of promeristem development","type":"broad"},{"name":"up regulation of shoot apical meristem development","type":"exact"},{"name":"up-regulation of SAM development","type":"exact"},{"name":"up-regulation of primary shoot meristem development","type":"related"},{"name":"up-regulation of promeristem development","type":"broad"},{"name":"up-regulation of shoot apical meristem development","type":"exact"},{"name":"upregulation of SAM development","type":"exact"},{"name":"upregulation of primary shoot meristem development","type":"related"},{"name":"upregulation of promeristem development","type":"broad"},{"name":"upregulation of shoot apical meristem development","type":"exact"}],"termid":"GO:1902185"}


id: GO:0033123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of purine nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide catabolic process","termid":"GO:0030813"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide catabolic process","termid":"GO:0033121"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"positive regulation of purine nucleotide catabolic process","synonyms":[{"name":"positive regulation of purine nucleotide breakdown","type":"exact"},{"name":"positive regulation of purine nucleotide catabolism","type":"exact"},{"name":"positive regulation of purine nucleotide degradation","type":"exact"}],"termid":"GO:0033123"}


id: PBO:0091814
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIR ANtagonist","termid":"PBO:0091814"}


id: GO:1903749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16857185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of protein localization to mitochondrion","secondary_identifiers":["Reactome:R-HSA-114452","Reactome:R-HSA-75108"],"synonyms":[{"name":"activation of establishment of protein localisation to mitochondrion","type":"narrow"},{"name":"activation of establishment of protein localization in mitochondrion","type":"narrow"},{"name":"activation of establishment of protein localization to mitochondrion","type":"narrow"},{"name":"positive regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"positive regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localization to mitochondrion","type":"exact"}],"termid":"GO:1903749"}


id: MONDO:0005320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the tibia in which the continuity of the bone is broken.","definition_xrefs":["EFO:0003944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibia fracture","secondary_identifiers":["SCTID:31978002","MESH:D013978"],"synonyms":[{"name":"bone fracture of tibia","type":"exact"},{"name":"tibia bone fracture","type":"exact"}],"termid":"MONDO:0005320","xrefs":{"Monarch":{"xref_id":"0005320"}}}


id: PBO:0065459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 5","termid":"PBO:0065459"}


id: PBO:0041581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 23","termid":"PBO:0041581"}


id: PBO:0052711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 3","termid":"PBO:0052711"}


id: PBO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase Y","termid":"PBO:0002341"}


id: MONDO:8000023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, primary immunodeficiency. It is caused by a currently undetermined defect in the Fas-induced apoptosis pathway. No mutations in Fas, FASLG or CASP10 are detectable. Disruption of Fas-induced apoptosis impairs lymphocyte homeostasis and immune tolerance. Characteristic laboratory findings include an increase in circulating, double-negative (CD4-/CD8-) T cells in the setting of immune-mediated anemia, thrombocytopenia and neutropenia. Clinical signs present in childhood include fatigue, pallor, bruising, hepatosplenomegaly and chronic, non-malignant, non-infectious lymphadenopathy. The clinical course is influenced by a strong association with other autoimmune disorders and an increased risk for developing Hodgkin and non-Hodgkin lymphoma.","definition_xrefs":["NCIT:C39577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type 3 autoimmune lymphoproliferative syndrome","secondary_identifiers":["UMLS:C1519711","MEDGEN:274327"],"termid":"MONDO:8000023","xrefs":{"Monarch":{"xref_id":"8000023"}}}


id: PBO:0079780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A1","termid":"PBO:0079780"}


id: RO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of endoparasite-of in which the parasite inhabits host cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"endoparasite_of","termid":"RO:0002634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular_endoparasite_of","termid":"RO:0002640"}


id: _global:regulates_o_results_in_specification_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that applies between a process that regulates the specification of some cell type or structure and the specified cell type or structure.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_specification_of","secondary_identifiers":["GOREL:0001027"],"synonyms":[{"name":"regulates_o_results_in_specification_of","type":"exact"}],"termid":"_global:regulates_o_results_in_specification_of"}


id: PBO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha 2","termid":"PBO:0060431"}


id: PBO:0058626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6758","termid":"PBO:0058626"}


id: PBO:0031606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase","termid":"PBO:0031606"}


id: PBO:0083204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL020C/BBC1","termid":"PBO:0083204"}


id: GO:0005356
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose + H+ = D-glucose + H+. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005361"],"synonyms":[{"name":"glucose:proton symporter activity","type":"exact"},{"name":"hydrogen:glucose symporter activity","type":"exact"},{"name":"hydrogen:glucose transporter activity","type":"related"},{"name":"transepithelial hydrogen/glucose transporter activity","type":"related"},{"name":"transepithelial hydrogen:glucose symporter activity","type":"narrow"},{"name":"transepithelial hydrogen:glucose transporter activity","type":"related"}],"termid":"GO:0005356","terms_by_termid":{"GO:0005358":null}}


id: PBO:0080995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 26","termid":"PBO:0080995"}


id: GO:0090086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein deubiquitination","termid":"GO:0090086"}


id: PBO:0081950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 3","termid":"PBO:0081950"}


id: MONDO:0042963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by an abnormal spleen position due to loss, weakness, or malformation of one or more of the ligaments that hold the spleen in its normal position in the left upper abdomen. It may present as a birth defect or follow injuries or pregnancy. Signs and symptoms include abdominal discomfort and splenomegaly.","definition_xrefs":["NCIT:C85224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splenic disorder","termid":"MONDO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"wandering spleen","secondary_identifiers":["MESH:D050805","MEDGEN:75782","NORD:1836","SCTID:191384005","GARD:328","UMLS:C0272414"],"synonyms":[{"name":"Ptoses, splenic","type":"related"},{"name":"Splenoptoses","type":"related"},{"name":"displaced spleen","type":"related"},{"name":"displaced spleens","type":"related"},{"name":"drifting spleen","type":"related"},{"name":"drifting spleens","type":"related"},{"name":"floating spleen","type":"related"},{"name":"floating spleens","type":"related"},{"name":"ptosis, splenic","type":"related"},{"name":"spleen, displaced","type":"related"},{"name":"spleen, drifting","type":"related"},{"name":"spleen, floating","type":"related"},{"name":"spleen, wandering","type":"related"},{"name":"spleens, displaced","type":"related"},{"name":"spleens, drifting","type":"related"},{"name":"spleens, floating","type":"related"},{"name":"spleens, wandering","type":"related"},{"name":"splenic Ptoses","type":"related"},{"name":"splenic ptosis","type":"related"},{"name":"splenoptosis","type":"related"},{"name":"wandering spleen","type":"exact"},{"name":"wandering spleens","type":"related"}],"termid":"MONDO:0042963","xrefs":{"Monarch":{"xref_id":"0042963"}}}


id: PBO:0050177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 4","termid":"PBO:0050177"}


id: GO:0007434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination in an adult organism of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland.","definition_xrefs":["GOC:tb","PMID:11598957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult salivary gland boundary specification","synonyms":[{"name":"larval salivary gland determination","type":"broad"}],"termid":"GO:0007434"}


id: MONDO:0006978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Insufficiency of arterial or venous blood supply to the spleen due to emboli, thrombi, vascular torsion, or pressure that produces a macroscopic area of necrosis. (From Stedman, 25th ed)","definition_xrefs":["MESH:D013159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splenic disorder","termid":"MONDO:0002332"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"splenic infarction","secondary_identifiers":["DOID:2533","MedDRA:10041648","ICD10CM:D73.5","ICD9:289.59","UMLS:C0037998","SCTID:22996003","EFO:1001190","MEDGEN:52468"],"synonyms":[{"name":"infarct of the spleen","type":"related"},{"name":"splenic infarct","type":"exact"},{"name":"splenic infarction","type":"exact"},{"name":"splenic infarcts","type":"related"}],"termid":"MONDO:0006978","xrefs":{"Monarch":{"xref_id":"0006978"}}}


id: PBO:0028535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028535"}


id: GO:0048439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the flower are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower morphogenesis","secondary_identifiers":["GO:0048411"],"termid":"GO:0048439"}


id: GO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of the Fanconi anaemia (FA) proteins including A, C, E, G and F (FANCA-F). Functions in the activation of the downstream protein FANCD2 by monoubiquitylation, and is essential for protection against chromosome breakage.","definition_xrefs":["GOC:jl","PMID:12093742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Fanconi anaemia nuclear complex","synonyms":[{"name":"FA complex","type":"exact"},{"name":"FA core complex","type":"exact"},{"name":"FA nuclear complex","type":"exact"},{"name":"Fanconi anaemia complex","type":"exact"}],"termid":"GO:0043240"}


id: PBO:0046518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid raft associated 2","termid":"PBO:0046518"}


id: SO:0000654
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mitochondrial gene located in a maxicircle.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetoplast_gene","termid":"SO:0000089"},{"relation_name":"part_of","term_name":"maxicircle","termid":"SO:0000742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxicircle_gene","synonyms":[{"name":"maxi-circle gene","type":"exact"},{"name":"maxicircle gene","type":"exact"}],"termid":"SO:0000654"}


id: FYPO:0006670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a haploid cell undergoes meiotic cell cycle.","definition_xrefs":["PomBase:mah","PomBase:mlr","PMID:9755190","PMID:31278118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"meiotic cell cycle entry in haploid cell","synonyms":[{"name":"haploid meiosis","type":"narrow"},{"name":"meiosis in haploid cell","type":"related"}],"termid":"FYPO:0006670"}


id: SO:0000855
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A homologous_region that is orthologous to another region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"orthologous","termid":"SO:0000858"},{"relation_name":"is_a","term_name":"homologous_region","termid":"SO:0000853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Ortholog#Orthology"],"synonyms":[{"name":"ortholog","type":"exact"},{"name":"orthologous region","type":"exact"},{"name":"orthologue","type":"exact"}],"termid":"SO:0000855"}


id: MONDO:0859157
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86295,86296],"is_not":false,"summary":null,"term":"MONDO:0859157"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial visceral myopathy","termid":"MONDO:0016829"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"visceral myopathy 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16446","UMLS:C5543466","MEDGEN:1783630","OMIM:619350"],"termid":"MONDO:0859157","terms_by_termid":{"MONDO:0859157":null},"xrefs":{"Monarch":{"xref_id":"0859157"}}}


id: PBO:0085381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter involved in multidrug resistance and resistance to singlet oxygen species","termid":"PBO:0085381"}


id: PBO:0025488
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrullinaemia type I","termid":"PBO:0025488"}


id: MONDO:0010402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic X-linked intellectual disability characterized by moderate intellectual disability with variable occurrence of asthenic body habitus, dysmorphic features, autistic features, macrocephaly, seizures, myoclonic jerks, and hyporeflexia that has material basis in mutation in the GRIA3 gene on chromosome Xq25.","definition_xrefs":["PMID:19449417","DOID:0060823","PMID:17989220","PMID:24721225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic X-linked intellectual disability 94","secondary_identifiers":["MEDGEN:437111","UMLS:C2678051","MESH:C567479","OMIM:300699"],"synonyms":[{"name":"MRX94","type":"exact"},{"name":"MRXS29","type":"exact"},{"name":"MRXSW","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic, Wu type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 94","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 29","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Wu type","type":"related"},{"name":"mental retardation, X-linked 94","type":"exact"},{"name":"mental retardation, X-linked, syndromic 29","type":"related"},{"name":"mental retardation, X-linked, syndromic, Wu type","type":"related"},{"name":"syndromic X-linked intellectual disability 29","type":"exact"},{"name":"syndromic X-linked intellectual disability 94","type":"exact"},{"name":"syndromic X-linked intellectual disability Wu type","type":"exact"},{"name":"syndromic X-linked intellectual disability due to GRIA3 anomalies","type":"exact"},{"name":"syndromic X-linked intellectual disability type 94","type":"exact"},{"name":"syndromic X-linked mental retardation 29","type":"exact"},{"name":"syndromic X-linked mental retardation Wu type","type":"exact"}],"termid":"MONDO:0010402","xrefs":{"Monarch":{"xref_id":"0010402"}}}


id: PBO:0029243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_caffeine","termid":"PBO:0029243"}


id: GO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated DNA strand.","definition_xrefs":["PMID:11238902","GOC:pde","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:0090580"}


id: PBO:0034353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_postdisplacement_relationship_with","termid":"PBO:0034353"}


id: PBO:0048355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 66","termid":"PBO:0048355"}


id: FYPO:0000016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"curved vegetative cell","synonyms":[{"name":"cell morphology, curved","type":"exact"},{"name":"comma-shaped cell","type":"exact"},{"name":"curved cell","type":"exact"},{"name":"curved cell during vegetative growth","type":"exact"},{"name":"curved vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000016"}


id: GO:0061004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the kidney to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"},{"relation_name":"part_of","term_name":"renal system pattern specification","termid":"GO:0072048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in kidney development","synonyms":[{"name":"kidney pattern formation","type":"related"},{"name":"kidney pattern specification","type":"exact"},{"name":"pattern formation involved in kidney development","type":"related"}],"termid":"GO:0061004"}


id: PBO:0004688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1 (predicted)","termid":"PBO:0004688"}


id: PBO:0077874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 1","termid":"PBO:0077874"}


id: GO:0008998
data:
  {"annotated_genes":["SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71542],"is_not":false,"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [thioredoxin]-disulfide + a 2'-deoxyribonucleoside 5'-triphosphate + H2O = [thioredoxin]-dithiol + a ribonucleoside 5'-triphosphate.","definition_xrefs":["RHEA:12701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","termid":"GO:0016728"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribonucleoside-triphosphate reductase (thioredoxin) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.17.4.2","MetaCyc:1.17.4.2-RXN"],"synonyms":[{"name":"2'-deoxyribonucleoside-triphosphate:oxidized-thioredoxin 2'-oxidoreductase activity","type":"related"},{"name":"2'-deoxyribonucleoside-triphosphate:thioredoxin-disulfide 2'-oxidoreductase activity","type":"related"},{"name":"ribonucleoside-triphosphate reductase activity","type":"exact"},{"name":"ribonucleotide reductase activity","type":"broad"}],"termid":"GO:0008998","terms_by_termid":{"GO:0008998":null}}


id: GO:0006647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidyl-N-monomethylethanolamine (PMME), a derivative of phosphatidylethanolamine with a methylated amine group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylethanolamine biosynthetic process","termid":"GO:0006646"},{"relation_name":"is_a","term_name":"phosphatidyl-N-monomethylethanolamine metabolic process","termid":"GO:0046468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidyl-N-monomethylethanolamine biosynthetic process","synonyms":[{"name":"PMME biosynthesis","type":"exact"},{"name":"PMME biosynthetic process","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine anabolism","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine biosynthesis","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine formation","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine synthesis","type":"exact"}],"termid":"GO:0006647"}


id: PBO:0039275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 3, pseudogene","termid":"PBO:0039275"}


id: GO:2000089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesonephric glomerulus development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glomerulus development","termid":"GO:0090193"},{"relation_name":"is_a","term_name":"regulation of mesonephric glomerulus development","termid":"GO:2000087"},{"relation_name":"positively_regulates","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesonephric glomerulus development","termid":"GO:2000089"}


id: PBO:0047966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(X)(q27.2) D","termid":"PBO:0047966"}


id: PBO:0003069
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds rDIS 5'-AGGTAAGGGTAATGCAC-3'","termid":"PBO:0003069"}


id: PBO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence error in genomic data","termid":"PBO:0000129"}


id: MONDO:0006033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroglial tumor that arises from the middle portion of the brain stem. It usually affects children and has a poor prognosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"high grade astrocytic tumor","termid":"MONDO:0016680"},{"relation_name":"is_a","term_name":"childhood brain stem glioma","termid":"MONDO:0003869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"diffuse intrinsic pontine glioma","secondary_identifiers":["GARD:13075","ONCOTREE:DIPG","Orphanet:497188","UMLS:C2986658","EFO:1000026","MEDGEN:458884","MESH:D000080443","NCIT:C94764"],"synonyms":[{"name":"DIPG","type":"exact"},{"name":"diffuse midline glioma","type":"related"},{"name":"infiltrative brainstem glioma","type":"related"}],"termid":"MONDO:0006033","xrefs":{"Monarch":{"xref_id":"0006033"}}}


id: PBO:0063604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 19","termid":"PBO:0063604"}


id: MONDO:0001406
data:
  {"annotated_genes":["SJAG_02398","SJAG_03163","SJAG_00260","SJAG_01111","SJAG_01671","SJAG_01895","SJAG_03920","SJAG_04213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[86775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[86685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[86921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"},{"annotations":[87064,87065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm arising from a peripheral nerve or the perineural sheaths.","definition_xrefs":["NCIT:C3321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"},{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01111":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"peripheral nervous system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:45817","EFO:0002431","DOID:1192","SCTID:126980002","MESH:D010524","UMLS:C0031118","ICD9:239.2","ONCOTREE:PNS"],"synonyms":[{"name":"CNS-excluded nervous sys. cancer","type":"narrow"},{"name":"PNS neoplasm","type":"exact"},{"name":"PNS neoplasms","type":"exact"},{"name":"PNS tumor","type":"exact"},{"name":"PNS tumour","type":"exact"},{"name":"neoplasm of PNS","type":"exact"},{"name":"neoplasm of peripheral nerve","type":"exact"},{"name":"neoplasm of peripheral nervous system","type":"exact"},{"name":"neoplasm of the PNS","type":"exact"},{"name":"neoplasm of the peripheral nerve","type":"exact"},{"name":"neoplasm of the peripheral nervous system","type":"exact"},{"name":"neoplasms, PNS","type":"exact"},{"name":"neoplasms, peripheral nervous system","type":"exact"},{"name":"nerve sheath neoplasm","type":"narrow"},{"name":"nerve sheath tumors","type":"narrow"},{"name":"nerve sheath tumours","type":"narrow"},{"name":"peripheral nerve neoplasm","type":"exact"},{"name":"peripheral nerve tumor","type":"exact"},{"name":"peripheral nerve tumour","type":"exact"},{"name":"peripheral nervous system neoplasm","type":"exact"},{"name":"peripheral nervous system neoplasm (disease)","type":"exact"},{"name":"peripheral nervous system tumor","type":"exact"},{"name":"peripheral nervous system tumour","type":"exact"},{"name":"tumor of PNS","type":"exact"},{"name":"tumor of peripheral nerve","type":"exact"},{"name":"tumor of peripheral nervous system","type":"exact"},{"name":"tumor of the PNS","type":"exact"},{"name":"tumor of the peripheral nerve","type":"exact"},{"name":"tumor of the peripheral nervous system","type":"exact"},{"name":"tumour of PNS","type":"exact"},{"name":"tumour of peripheral nerve","type":"exact"},{"name":"tumour of peripheral nervous system","type":"exact"},{"name":"tumour of the PNS","type":"exact"},{"name":"tumour of the peripheral nerve","type":"exact"},{"name":"tumour of the peripheral nervous system","type":"exact"}],"termid":"MONDO:0001406","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0024517":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0001406"}}}


id: PBO:0089739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS complex subunit Vac7","termid":"PBO:0089739"}


id: PBO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.2","termid":"PBO:0000396"}


id: MONDO:1030005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatic mosaic condition caused by a postzygotic mutation (c.1234 C>T p.Leu412Phe) in the SMO gene. Two overlapping clinical syndromes associated with this variant in SMO have been reported; Curry-Jones Syndrome (MIM:601707) and Happle-Tinschert Syndrome. The syndrome is characterized by cutaneous and skeletal manifestations such as linear hypo‐ or hyperpigmented lesions, basaloid follicular hamartomas, palmoplantar pitting, atrophoderma, hypertrichosis, polydactyly or syndactyly, rib anomalies (rudimentary ribs), and limb‐length anomalies. Craniofacial and dental abnormalities such as dysmorphic facies, macrocephaly, craniosynostosis, jaw tumors (ameloblastoma) have also been reported. Additional abnormalities impacting the gastrointestinal, cerebral, ophthalmic, and gonadal organs should also be considered. Some of these features include anal anomaly, colonic adenocarcinoma, severe constipation, myelofibrosis and smooth muscle hamartomas, malrotation, medulloblastoma, cerebral malformations, developmental delay, cataract, microphthalmia, coloboma, glaucoma, and cryptorchidism.","definition_xrefs":["PMID:27236920","PMID:31120550","PMID:30497210","PMID:7606318","PMID:32413283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic SMO syndrome","termid":"MONDO:1030005","xrefs":{"Monarch":{"xref_id":"1030005"}}}


id: PBO:0073902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC14A2 antisense RNA 1","termid":"PBO:0073902"}


id: GO:0035552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a single-stranded DNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:18775698"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative single-stranded DNA demethylation (obsolete GO:0035552)","synonyms":[{"name":"oxidative ssDNA demethylation","type":"exact"}],"termid":"GO:0035552"}


id: MOD:00831
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetylaminoglucosyl)-L-asparagine.","definition_xrefs":["RESID:AA0151#var","PubMed:5490222","PubMed:111247","PubMed:1694179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"N4-(N-acetylamino)hexosyl-L-asparagine","termid":"MOD:01674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(N-acetylamino)glucosyl-L-asparagine","synonyms":[{"name":"CARBOHYD N-linked (GlcNAc) asparagine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"N4GlcNAcAsn","type":"exact"}],"termid":"MOD:00831"}


id: MONDO:0041008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete contact dermatitis caused by poison oak (obsolete MONDO:0041008)","secondary_identifiers":["SCTID:200824008"],"synonyms":[{"name":"contact dermatitis caused by poison oak","type":"exact"},{"name":"contact dermatitis due to poison oak","type":"exact"}],"termid":"MONDO:0041008","xrefs":{"Monarch":{"xref_id":"0041008"}}}


id: PBO:0029953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_secretion","termid":"PBO:0029953"}


id: PBO:0045845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 35","termid":"PBO:0045845"}


id: PBO:0029033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubule_bundles_present_in_decreased_numbers","termid":"PBO:0029033"}


id: GO:0052648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ribitol phosphates, any phosphorylated form of ribitol, the pentitol derived formally by reduction of the -CHO group of either D- or L-ribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol phosphate metabolic process","termid":"GO:0052647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribitol phosphate metabolic process","synonyms":[{"name":"ribitol phosphate metabolism","type":"exact"}],"termid":"GO:0052648"}


id: GO:0042645
data:
  {"annotated_genes":["SJAG_04929","SJAG_00153","SJAG_MIT07","SJAG_06635","SJAG_MIT06","SJAG_00611","SJAG_03957","SJAG_03163","SJAG_02464","SJAG_00564","SJAG_01807","SJAG_03906","SJAG_01262","SJAG_03068","SJAG_00634","SJAG_03780","SJAG_04183","SJAG_MIT05"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75387,88070,95504,97952,101086,103935,109921,111864],"is_not":false,"summary":null,"term":"GO:0042645"},{"annotations":[63426,102680,118849,105735,112305,118842,88336,99088,118850,102661],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000262"}]},"cv_name":"cellular_component","definition":"The region of a mitochondrion to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00564":null,"SJAG_00611":null,"SJAG_00634":null,"SJAG_01262":null,"SJAG_01807":null,"SJAG_02464":null,"SJAG_03068":null,"SJAG_03163":null,"SJAG_03780":null,"SJAG_03906":null,"SJAG_03957":null,"SJAG_04183":null,"SJAG_04929":null,"SJAG_06635":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial nucleoid","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0042645","terms_by_termid":{"GO:0000262":null,"GO:0042645":null}}


id: PBO:0077307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM44 antisense RNA 2","termid":"PBO:0077307"}


id: PBO:0005371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic Reticulum metallopeptidase 1 (predicted)","termid":"PBO:0005371"}


id: PBO:0083502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified non essential genes ERV2/YPR037C and TIP41/YPR040W","termid":"PBO:0083502"}


id: MONDO:1010945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycosis fungoides that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horse lymphoma","termid":"MONDO:0700172"},{"relation_name":"is_a","term_name":"mycosis fungoides, non-human animal","termid":"MONDO:1010211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycosis fungoides, horse","secondary_identifiers":["OMIA:001109-9796"],"termid":"MONDO:1010945","xrefs":{"Monarch":{"xref_id":"1010945"}}}


id: MONDO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tenosynovitis","termid":"MONDO:0004855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tenosynovitis of foot and ankle","secondary_identifiers":["UMLS:C0158331","DOID:312","ICD9:727.06","MEDGEN:1843483"],"termid":"MONDO:0002517","xrefs":{"Monarch":{"xref_id":"0002517"}}}


id: MONDO:0015813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extranodal lymphoma of lymphoid tissue associated with mucosa that is in contact with exogenous antigens. Many of the sites of these lymphomas, such as the stomach, salivary gland, and thyroid, are normally devoid of lymphoid tissue. They acquire mucosa-associated lymphoid tissue (malt) type as a result of an immunologically mediated disorder.","definition_xrefs":["MESH:D018442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous B-cell lymphoma","termid":"MONDO:0015819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"primary cutaneous marginal zone B-cell lymphoma","secondary_identifiers":["MEDGEN:698594","NCIT:C7230","GARD:20159","Orphanet:178536","UMLS:C1275321","SCTID:404140004"],"synonyms":[{"name":"C-MALT","type":"exact"},{"name":"PCMZL","type":"exact"},{"name":"Primary cutaneous marginal zone B cell lymphoma of mucosa-associated lymphoid tissue","type":"exact"},{"name":"Primary cutaneous marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue","type":"exact"},{"name":"Primary cutaneous marginal zone lymphoma of mucosa-associated lymphoid tissue","type":"exact"},{"name":"cutaneous Immunocytoma","type":"exact"},{"name":"marginal zone B cell lymphoma of skin","type":"exact"},{"name":"marginal zone B cell lymphoma of the skin","type":"exact"},{"name":"salt lymphoma","type":"exact"},{"name":"skin-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0015813","xrefs":{"Monarch":{"xref_id":"0015813"}}}


id: GO:0036522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal localization of a protein to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:25063865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host protein localization to phagocytic vesicle","synonyms":[{"name":"disruption of host protein localisation to phagosome","type":"exact"},{"name":"inhibition of host protein localisation to phagosome","type":"exact"},{"name":"negative regulation by symbiont of host protein localization to phagocytic vesicle","type":"exact"},{"name":"suppression of host protein localisation to phagosome","type":"exact"}],"termid":"GO:0036522"}


id: PBO:0044863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 1A","termid":"PBO:0044863"}


id: MOD:01296
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to monosodium L-glutamate.","definition_xrefs":["PubMed:12216740","Unimod:30#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-glutamate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"MSG","type":"exact"},{"name":"Na1Glu","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01296"}


id: MONDO:0025699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 12","secondary_identifiers":["DOID:0112370","MEDGEN:1782096","GARD:16443","OMIM:619325","UMLS:C5444111"],"synonyms":[{"name":"CSS12","type":"exact"}],"termid":"MONDO:0025699","xrefs":{"Monarch":{"xref_id":"0025699"}}}


id: PBO:0066321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBX1 pseudogene 1","termid":"PBO:0066321"}


id: PR:Q9P3E6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.05c gene.","definition_xrefs":["UniProtKB:Q9P3E6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C750.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.05c","synonyms":[{"name":"Spom972h-SPAC750.05c","type":"exact"}],"termid":"PR:Q9P3E6"}


id: PBO:0056484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 1","termid":"PBO:0056484"}


id: PATO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"young","termid":"PATO:0000309"}


id: GO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the lysis of peptide bonds with broad specificity similar to that of pepsin A. Clots milk by cleavage of a single Ser-Phe-l-Met-Ala bond in kappa-casein.","definition_xrefs":["EC:3.4.23.4"],"gene_count":0,"genotype_count":0,"name":"obsolete chymosin activity (obsolete GO:0030602)","synonyms":[{"name":"chymosin activity","type":"exact"},{"name":"rennin","type":"related"},{"name":"rennin (but this should be avoided since it leads to confusion with renin)","type":"related"}],"termid":"GO:0030602"}


id: GO:0052868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-lysine + protein-lysine = protein N6-(lysyl)-L-lysine + protein. This reaction is the addition of lysine group from one protein to a lysine residue in a second protein, producing N6-(lysyl)-L-lysine.","definition_xrefs":["PMID:20729861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein-lysine lysyltransferase activity","termid":"GO:0052868"}


id: PBO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peloto ortholog (predicted)","termid":"PBO:0009930"}


id: GO:0052909
data:
  {"annotated_genes":["SJAG_02821"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68072],"is_not":false,"summary":null,"term":"GO:0052909"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 S-adenosyl-L-methionine + adenine(1779)/adenine(1780) in 18S rRNA = 4 S-adenosyl-L-homocysteine + N(6)-dimethyladenine(1779)/N(6)-dimethyladenine(1780) in 18S rRNA.","definition_xrefs":["RHEA:42780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6,N6-)-dimethyltransferase activity","termid":"GO:0000179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.1.1.183","MetaCyc:RXN-11634"],"synonyms":[{"name":"M(6)(2)A dimethylase activity","type":"broad"}],"termid":"GO:0052909","terms_by_termid":{"GO:0052909":null}}


id: GO:0031065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylation (obsolete GO:0031065)","synonyms":[{"name":"activation of histone deacetylation","type":"narrow"},{"name":"stimulation of histone deacetylation","type":"narrow"},{"name":"up regulation of histone deacetylation","type":"exact"},{"name":"up-regulation of histone deacetylation","type":"exact"},{"name":"upregulation of histone deacetylation","type":"exact"}],"termid":"GO:0031065"}


id: GO:0048697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collateral sprouting in the absence of injury.","definition_xrefs":["GOC:dgh","GOC:lm","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting in absence of injury","termid":"GO:0048696"},{"relation_name":"positively_regulates","term_name":"collateral sprouting in absence of injury","termid":"GO:0048669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting in absence of injury","synonyms":[{"name":"activation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"stimulation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"up regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"up-regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"upregulation of collateral sprouting in the absence of injury","type":"exact"}],"termid":"GO:0048697"}


id: MONDO:0016252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare uterine cancer.","gene_count":0,"genotype_count":0,"name":"obsolete rare uterine cancer (obsolete MONDO:0016252)","secondary_identifiers":["Orphanet:213564"],"synonyms":[{"name":"rare cancer of uterus","type":"exact"},{"name":"rare malignant tumor of uterus","type":"exact"},{"name":"rare uterine cancer","type":"exact"},{"name":"rare uterine malignant tumor","type":"exact"}],"termid":"MONDO:0016252","xrefs":{"Monarch":{"xref_id":"0016252"}}}


id: FYPO:0003170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal arginine import","termid":"FYPO:0001654"},{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased arginine import","synonyms":[{"name":"increased L-arginine import","type":"exact"},{"name":"increased L-arginine import across plasma membrane","type":"exact"},{"name":"increased L-arginine uptake","type":"exact"},{"name":"increased arginine import during mitotic cell cycle","type":"related"},{"name":"increased arginine import during vegetative growth","type":"exact"},{"name":"increased arginine import into cell","type":"exact"}],"termid":"FYPO:0003170"}


id: GO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein as part of a process of ubiquitin-dependent protein catabolism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647","GO:0030163"],"is_obsolete":false,"name":"protein deubiquitination involved in ubiquitin-dependent protein catabolic process","termid":"GO:0071947"}


id: PBO:0028838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcript_length_by_3'_extension","termid":"PBO:0028838"}


id: GO:0071646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of macrophage inflammatory protein-1 gamma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"macrophage inflammatory protein-1 gamma production","termid":"GO:0071607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"regulation of CCL9 production","type":"exact"},{"name":"regulation of MIP-1g production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071646"}


id: SO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ds_RNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as double stranded RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_RNA_viral_sequence","synonyms":[{"name":"double stranded RNA virus sequence","type":"exact"},{"name":"ds RNA viral sequence","type":"exact"}],"termid":"SO:0001169"}


id: GO:0010318
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Refers to the beta subunit of the heterodimeric complex that possesses pyrophosphate-dependent phosphofructokinase activity.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"pyrophosphate-dependent phosphofructokinase complex","termid":"GO:0010316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex","synonyms":[{"name":"PFK complex, beta-subunit","type":"related"}],"termid":"GO:0010318"}


id: GO:0072692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Repression of transcription of DNA at the central core of a regional centromere by altering the structure of chromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin silencing at centromere central core (obsolete GO:0072692)","synonyms":[{"name":"centromere central core chromatin silencing","type":"exact"},{"name":"chromatin silencing at centromeric central core","type":"exact"},{"name":"chromatin silencing at chromosome kinetochore domain","type":"exact"},{"name":"heterochromatic silencing at centromere central core","type":"exact"}],"termid":"GO:0072692"}


id: PBO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: GO:1902201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bacterial-type flagellum-dependent cell motility.","definition_xrefs":["GOC:jl","GOC:TermGenie","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum-dependent cell motility","termid":"GO:1902021"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"negatively_regulates","term_name":"bacterial-type flagellum-dependent cell motility","termid":"GO:0071973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bacterial-type flagellum-dependent cell motility","synonyms":[{"name":"down regulation of bacterial-type flagellar cell motility","type":"exact"},{"name":"down regulation of flagellin-based flagellar cell motility","type":"exact"},{"name":"down-regulation of bacterial-type flagellar cell motility","type":"exact"},{"name":"down-regulation of flagellin-based flagellar cell motility","type":"exact"},{"name":"downregulation of bacterial-type flagellar cell motility","type":"exact"},{"name":"downregulation of flagellin-based flagellar cell motility","type":"exact"},{"name":"inhibition of bacterial-type flagellar cell motility","type":"narrow"},{"name":"inhibition of flagellin-based flagellar cell motility","type":"exact"},{"name":"negative regulation of bacterial-type flagellar cell motility","type":"related"},{"name":"negative regulation of flagellin-based flagellar cell motility","type":"exact"}],"termid":"GO:1902201"}


id: PBO:0039298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG12 alpha-1,6-mannosyltransferase","termid":"PBO:0039298"}


id: GO:0075225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"negative regulation of sporangium development","termid":"GO:0075312"},{"relation_name":"negatively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangium germination","synonyms":[{"name":"negative regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075225"}


id: GO:0034126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of MyD88-dependent toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0034124"},{"relation_name":"positively_regulates","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"positive regulation of MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034126"}


id: PBO:0055807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 2b, pseudogene","termid":"PBO:0055807"}


id: GO:1905051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of base-excision repair.","definition_xrefs":["GO_REF:0000058","PMID:18973764","GOC:TermGenie","GOC:ah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of base-excision repair","synonyms":[{"name":"regulation of BER","type":"exact"}],"termid":"GO:1905051"}


id: GO:0033366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a secretory granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to secretory granule","synonyms":[{"name":"protein localisation in secretory granule","type":"exact"},{"name":"protein localization in secretory granule","type":"exact"}],"termid":"GO:0033366"}


id: GO:0080048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-glucose + phosphate = alpha-D-glucose-1-phosphate + GDP.","definition_xrefs":["PMID:17462988","PMID:18463094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"GDP-D-glucose phosphorylase activity","secondary_identifiers":["MetaCyc:RXN-12486","RHEA:30387","GO:0010474","EC:2.7.7.78"],"synonyms":[{"name":"GDP:glucose-1-phosphate guanyltransferase activity","type":"exact"},{"name":"glucose-1-phosphate guanylyltransferase (GDP) activity","type":"exact"}],"termid":"GO:0080048"}


id: GO:1904491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a ciliary transition zone.","definition_xrefs":["GOC:TermGenie","PMID:21422230","GOC:kmv","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ciliary transition zone","synonyms":[{"name":"protein localisation in ciliary transition zone","type":"exact"},{"name":"protein localisation to ciliary transition zone","type":"exact"},{"name":"protein localization in ciliary transition zone","type":"exact"}],"termid":"GO:1904491"}


id: MONDO:0030529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agammaglobulinemia characterized by early-childhood onset of recurrent viral and bacterial infections affecting various organ systems, particularly the sinopulmonary system. Laboratory studies show low or absent circulating B cells and hypo- or agammaglobulinemia. Affected individuals may have adverse reactions to certain vaccinations, such as the polio vaccine. Treatment with replacement Ig is effective; hematopoietic stem cell transplantation has also been reported.","definition_xrefs":["OMIM:619707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia 10, autosomal dominant","secondary_identifiers":["DOID:0081142","UMLS:C5676900","MEDGEN:1806624"],"synonyms":[{"name":"AGM10","type":"exact"}],"termid":"MONDO:0030529","xrefs":{"Monarch":{"xref_id":"0030529"}}}


id: PBO:0076841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric repeat binding factor 2","termid":"PBO:0076841"}


id: MONDO:0009063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventriculomegaly-cystic kidney disease","secondary_identifiers":["MEDGEN:346584","Orphanet:443988","DOID:0111625","UMLS:C1857423","OMIM:219730","GARD:17757"],"synonyms":[{"name":"VMCKD","type":"exact"},{"name":"congenital nephrosis-cerebral ventriculomegaly syndrome","type":"exact"},{"name":"ventriculomegaly with cystic kidney disease","type":"related"}],"termid":"MONDO:0009063","xrefs":{"Monarch":{"xref_id":"0009063"}}}


id: MONDO:1012289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive ataxia, non-human animal","termid":"MONDO:1011633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive ataxia, cattle","secondary_identifiers":["OMIA:001091-9913"],"termid":"MONDO:1012289","xrefs":{"Monarch":{"xref_id":"1012289"}}}


id: MONDO:1011649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch with subclavian artery and ligamentum arteriosum, non-human animal","secondary_identifiers":["OMIA:001570"],"termid":"MONDO:1011649","xrefs":{"Monarch":{"xref_id":"1011649"}}}


id: MONDO:0005890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder that is characterized by bone cysts and fractures, resulting from hyperparathyroidism.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone resorption disease","termid":"MONDO:0000837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteitis fibrosa","secondary_identifiers":["NCIT:C34875","UMLS:C0029405","DOID:3341","EFO:0007413","MESH:D010002","SCTID:84727000","MEDGEN:14529"],"synonyms":[{"name":"Von Recklinghausen disease of Bone","type":"exact"},{"name":"Von Recklinghausen's bone disease","type":"exact"},{"name":"Von Recklinghausen's disease of Bone","type":"exact"},{"name":"hyperparathyroid bone disease","type":"exact"},{"name":"osteitis fibrosa cystica","type":"exact"},{"name":"osteitis fibrosa cystica generalisata","type":"exact"}],"termid":"MONDO:0005890","xrefs":{"Monarch":{"xref_id":"0005890"}}}


id: PBO:0108559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator Swi5","termid":"PBO:0108559"}


id: PBO:0041818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 3","termid":"PBO:0041818"}


id: GO:0060863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately modulating the rate, or extent of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"regulation of floral organ abscission","termid":"GO:0060860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of floral organ abscission by signal transduction","termid":"GO:0060863"}


id: GO:0072177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric duct over time, from its initial formation to a mature structure. A mesonephric duct is a tube drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"},{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct development","synonyms":[{"name":"Wolffian duct development","type":"exact"}],"termid":"GO:0072177"}


id: GO:0030059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aralkylamine + H2O + 2 oxidized [azurin] = an aromatic aldehyde + 2 H+ + NH4+ + 2 reduced [azurin].","definition_xrefs":["PMID:10506161","RHEA:47796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, with a copper protein as acceptor","termid":"GO:0052877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aralkylamine dehydrogenase (azurin) activity","secondary_identifiers":["EC:1.4.9.2","MetaCyc:ARALKYLAMINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"aralkylamine:(azurin) oxidoreductase (deaminating) activity","type":"exact"},{"name":"aromatic amine dehydrogenase (azurin) activity","type":"exact"}],"termid":"GO:0030059"}


id: GO:0045562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045562)","synonyms":[{"name":"regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"regulation of TRAIL receptor 2 synthesis","type":"exact"}],"termid":"GO:0045562"}


id: GO:0062031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A MAPK cascade containing at least the Kss1 MAP kinase. It starts with the activation of Ste20, a MAP4K, which activates Ste11, a MAP3K, which in turn activate Ste7, a MAP2K, which activates Kss1. The kinases in each tier phosphorylate and activate the kinases in the downstream tier. The filamentous growth MAPK cascade is activated as a result of partial nutrient deprivation and  results in filamentous growth.","definition_xrefs":["PMID:17604854","PMID:33335117","PMID:38187743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"filamentous growth MAPK cascade","termid":"GO:0062031"}


id: GO:0033653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a chloroplast as it is found in host cells and which are a chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell chloroplast","termid":"GO:0033652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell chloroplast part","synonyms":[{"name":"host chloroplast component","type":"exact"}],"termid":"GO:0033653"}


id: GO:0051895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of focal adhesion assembly","termid":"GO:0051893"},{"relation_name":"is_a","term_name":"negative regulation of cell-substrate junction organization","termid":"GO:0150118"},{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"negatively_regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of focal adhesion assembly","synonyms":[{"name":"down regulation of focal adhesion formation","type":"exact"},{"name":"down-regulation of focal adhesion formation","type":"exact"},{"name":"downregulation of focal adhesion formation","type":"exact"},{"name":"inhibition of focal adhesion formation","type":"narrow"}],"termid":"GO:0051895"}


id: GO:0048651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals that have the potential to develop any of several possible distinct developmental paths have their individual developmental fates determined in response to environmental cues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"polyphenic determination","termid":"GO:0048647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyphenic determination, influence by environmental factors","termid":"GO:0048651"}


id: GO:0042007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-18.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-18 binding","synonyms":[{"name":"IL-18 binding","type":"exact"}],"termid":"GO:0042007"}


id: GO:0017185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-lysine to form peptidyl-hydroxylysine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}


id: PBO:0054582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1985","termid":"PBO:0054582"}


id: GO:0008081
data:
  {"annotated_genes":["SJAG_01519","SJAG_00956","SJAG_00321","SJAG_01860","SJAG_02481","SJAG_00622","SJAG_01428","SJAG_03665","SJAG_04418","SJAG_01219","SJAG_03994","SJAG_02298","SJAG_02161"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79676],"is_not":false,"summary":null,"term":"GO:0008081"},{"annotations":[90399,100843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004113"},{"annotations":[116191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004119"},{"annotations":[116192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004118"},{"annotations":[78746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004115"},{"annotations":[78748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047555"},{"annotations":[79094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017005"},{"annotations":[71231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047389"},{"annotations":[93292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062050"},{"annotations":[108624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[97544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[72325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[67035,109757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004528"},{"annotations":[74028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[62884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group.","definition_xrefs":["EC:3.1.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric ester hydrolase activity","termid":"GO:0042578"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_00622":null,"SJAG_00956":null,"SJAG_01219":null,"SJAG_01428":null,"SJAG_01519":null,"SJAG_01860":null,"SJAG_02161":null,"SJAG_02298":null,"SJAG_02481":null,"SJAG_03665":null,"SJAG_03994":null,"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphoric diester hydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016792","Reactome:R-HSA-5693578","GO:0004434"],"synonyms":[{"name":"phosphodiesterase","type":"narrow"}],"termid":"GO:0008081","terms_by_termid":{"GO:0004113":null,"GO:0004115":null,"GO:0004118":null,"GO:0004119":null,"GO:0004435":null,"GO:0004528":null,"GO:0004630":null,"GO:0004767":null,"GO:0008081":null,"GO:0017005":null,"GO:0034479":null,"GO:0047389":null,"GO:0047555":null,"GO:0052714":null,"GO:0062050":null}}


id: SO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Consensus region of primary transcript bordering junction of splicing. A region that overlaps exactly 2 base and adjacent_to splice_junction.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_site","secondary_identifiers":["http://en.wikipedia.org/wiki/Splice_site"],"synonyms":[{"name":"splice site","type":"exact"}],"termid":"SO:0000162"}


id: PBO:0113412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated co-chaperone; zuotin functions in ribosome biogenesis and as a chaperone for nascent polypeptide chains with Ssz1p and Ssb1/2p; subunit of the ribosome-associated complex (RAC) that stimulates Ssb1/2p ATPase activity to facilitate interaction with nascent polypeptide chains emerging from the ribosome exit tunnel; regulates translation upon inhibition of TORC1; contains a DnaJ domain; human gene DNAJC2 partially complements the yeast zuo1 null mutant","termid":"PBO:0113412"}


id: MONDO:1010522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontonasal dysplasia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia, non-human animal","termid":"MONDO:1010036"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontonasal dysplasia, cattle","secondary_identifiers":["OMIA:002307-9913"],"termid":"MONDO:1010522","xrefs":{"Monarch":{"xref_id":"1010522"}}}


id: MONDO:0016902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 3","termid":"MONDO:0016868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 3","secondary_identifiers":["MEDGEN:1825968","UMLS:C5679675","Orphanet:262019","icd11.foundation:1054533453","GARD:20823"],"synonyms":[{"name":"partial deletion of chromosome 3q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 3","type":"exact"},{"name":"partial monosomy of chromosome 3q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 3","type":"exact"}],"termid":"MONDO:0016902","xrefs":{"Monarch":{"xref_id":"0016902"}}}


id: PBO:0055398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2828","termid":"PBO:0055398"}


id: MONDO:1010197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myositis ossificans that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myositis ossificans, non-human animal","secondary_identifiers":["OMIA:000697"],"termid":"MONDO:1010197","xrefs":{"Monarch":{"xref_id":"1010197"}}}


id: MONDO:1012029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bleeding disorder, non-human animal","termid":"MONDO:1011685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, pig","secondary_identifiers":["OMIA:000113-9823"],"termid":"MONDO:1012029","xrefs":{"Monarch":{"xref_id":"1012029"}}}


id: GO:0061554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to ganglion. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"ganglion morphogenesis","termid":"GO:0061552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion formation","synonyms":[{"name":"ganglia formation","type":"related"}],"termid":"GO:0061554"}


id: MONDO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hydrops of gallbladder","secondary_identifiers":["UMLS:C0152445","ICD9:575.3","ICD10CM:K82.1","icd11.foundation:532595534","DOID:9717","MEDGEN:509035","SCTID:47312008"],"termid":"MONDO:0004859","xrefs":{"Monarch":{"xref_id":"0004859"}}}


id: PBO:0083879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric enterobactin transmembrane transporter; expressed under conditions of iron deprivation; member of the major facilitator superfamily; expression is regulated by Rcs1p and affected by chloroquine treatment","termid":"PBO:0083879"}


id: PBO:0018100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase Pan5 (predicted)","termid":"PBO:0018100"}


id: GO:0030688
data:
  {"annotated_genes":["SJAG_03539","SJAG_04611","SJAG_00838","SJAG_01618","SJAG_05018","SJAG_01338","SJAG_04339","SJAG_02250","SJAG_00897","SJAG_05187","SJAG_05186","SJAG_03654","SJAG_03458"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65842,68848,69507,69991,70916,74355,79012,79147,106763,110850,112791],"is_not":false,"summary":null,"term":"GO:0030688"},{"annotations":[72394,78419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00838":null,"SJAG_00897":null,"SJAG_01338":null,"SJAG_01618":null,"SJAG_02250":null,"SJAG_03458":null,"SJAG_03539":null,"SJAG_03654":null,"SJAG_04339":null,"SJAG_04611":null,"SJAG_05018":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0030684","GO:0005575"],"is_obsolete":false,"name":"preribosome, small subunit precursor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"43S preribosome","type":"narrow"}],"termid":"GO:0030688","terms_by_termid":{"GO:0030688":null,"GO:0030692":null}}


id: PBO:0004760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methyltransferase (predicted)","termid":"PBO:0004760"}


id: PBO:0078879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 2","termid":"PBO:0078879"}


id: GO:0006080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mannan backbone composed of D-mannose unites, substituted with D-glucose and/or D-galactose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"substituted mannan metabolic process","synonyms":[{"name":"substituted mannan metabolism","type":"exact"}],"termid":"GO:0006080"}


id: PBO:0086155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pre-rRNA processing; also required for 40S ribosomal subunit assembly","termid":"PBO:0086155"}


id: GO:0090418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the S phase of the mitotic cell cycle.","definition_xrefs":["PMID:16912276"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in S-phase of mitotic cell cycle (obsolete GO:0090418)","synonyms":[{"name":"activation of S phase specific transcription in the mitotic cell cycle","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle","type":"related"},{"name":"activation of transcription involved in S phase of mitotic cell cycle","type":"related"},{"name":"positive regulation of S phase specific transcription in the mitotic cell cycle","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle","type":"related"},{"name":"positive regulation of transcription involved in S-phase of mitotic cell cycle","type":"exact"},{"name":"up-regulation of S phase specific transcription in the mitotic cell cycle","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle","type":"related"},{"name":"up-regulation of transcription involved in S phase of mitotic cell cycle","type":"related"}],"termid":"GO:0090418"}


id: PR:O74846
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.10c","secondary_identifiers":["UniProtKB:O74846"],"synonyms":[{"name":"Spom972h-EXOC3","type":"exact"}],"termid":"PR:O74846"}


id: PBO:0016587
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Two C","termid":"PBO:0016587"}


id: GO:0072496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of Pup from one protein to another via the reaction X-Pup + Y = Y-Pup + X, where both X-Pup and Y-Pup are covalent linkages.","definition_xrefs":["GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0019787","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"Pup transferase activity","synonyms":[{"name":"Pup conjugating enzyme activity","type":"narrow"}],"termid":"GO:0072496"}


id: GO:0102530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aclacinomycin T(1+) + H2O = 15-demethylaclacinomycin T + methanol + H+.","definition_xrefs":["EC:3.1.1.95","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"aclacinomycin T methylesterase activity","secondary_identifiers":["MetaCyc:RXN-14703","RHEA:37891"],"termid":"GO:0102530"}


id: SO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A Y-RNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"Y_RNA_primary_transcript","termid":"SO:0002042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_Y_RNA_primary_transcript","synonyms":[{"name":"miR encoding Y-RNA primary transcript","type":"exact"}],"termid":"SO:0002043"}


id: GO:0030926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of calcium into a 4Mn-Ca-4O complex by bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide as in the photosystem II catalytic site.","definition_xrefs":["PMID:14764885","RESID:AA0366"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium incorporation into metallo-oxygen cluster via bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide (obsolete GO:0030926)","termid":"GO:0030926"}


id: MONDO:0005759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of cattle and other herbivores with the giant liver fluke Fascioloides magna. It is characterized by extensive destruction of the liver parenchyma.","definition_xrefs":["MESH:D005213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascioloidiasis","secondary_identifiers":["MEDGEN:8791","DOID:1217","SCTID:69550000","UMLS:C0015655"],"termid":"MONDO:0005759","xrefs":{"Monarch":{"xref_id":"0005759"}}}


id: PBO:0025547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein Udp7","termid":"PBO:0025547"}


id: PBO:0089346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim8-Tim13 mitochondrial intermembrane space protein transporter complex subunit Tim13","termid":"PBO:0089346"}


id: PBO:0060219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein 1","termid":"PBO:0060219"}


id: GO:0002714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte mediated immunity","termid":"GO:0002708"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"positively_regulates","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell mediated immunity","synonyms":[{"name":"activation of B cell mediated immunity","type":"narrow"},{"name":"positive regulation of B lymphocyte mediated immunity","type":"exact"},{"name":"positive regulation of B-cell mediated immunity","type":"exact"},{"name":"positive regulation of B-lymphocyte mediated immunity","type":"exact"},{"name":"stimulation of B cell mediated immunity","type":"narrow"},{"name":"up regulation of B cell mediated immunity","type":"exact"},{"name":"up-regulation of B cell mediated immunity","type":"exact"},{"name":"upregulation of B cell mediated immunity","type":"exact"}],"termid":"GO:0002714"}


id: GO:0090344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell aging (obsolete GO:0090344)","termid":"GO:0090344"}


id: PR:O13777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf5 gene.","definition_xrefs":["UniProtKB:O13777","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1610.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.01","synonyms":[{"name":"Spom972h-saf5","type":"exact"}],"termid":"PR:O13777"}


id: MONDO:0037743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from the soft tissues of the mediastinum.","definition_xrefs":["NCIT:C6642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinal mesenchymal tumor","termid":"MONDO:0003512"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"},{"relation_name":"is_a","term_name":"malignant soft tissue neoplasm","termid":"MONDO:0024637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinal soft tissue cancer","secondary_identifiers":["UMLS:C1334599","MEDGEN:277335"],"synonyms":[{"name":"malignant mediastinal mesenchymal tumor","type":"exact"},{"name":"malignant mediastinal mesenchymal tumour","type":"exact"},{"name":"malignant mediastinal soft tissue neoplasm","type":"exact"},{"name":"malignant mediastinal soft tissue tumor","type":"exact"},{"name":"malignant mediastinal soft tissue tumour","type":"exact"},{"name":"malignant soft tissue neoplasm of mediastinum","type":"exact"},{"name":"malignant soft tissue neoplasm of the mediastinum","type":"exact"},{"name":"malignant soft tissue tumor of mediastinum","type":"exact"},{"name":"malignant soft tissue tumor of the mediastinum","type":"exact"},{"name":"malignant soft tissue tumour of mediastinum","type":"exact"},{"name":"malignant soft tissue tumour of the mediastinum","type":"exact"},{"name":"mediastinal mesenchymal tumor, malignant","type":"exact"}],"termid":"MONDO:0037743","xrefs":{"Monarch":{"xref_id":"0037743"}}}


id: PBO:0038278
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0038278"}


id: PBO:0110463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACO2 pseudogene 2","termid":"PBO:0110463"}


id: PBO:0040180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate beta-hydroxylase domain containing 1","termid":"PBO:0040180"}


id: PBO:0085630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in fluoride export; nearly identical to FEX1, and deletion of both proteins results in a large increase in fluoride sensitivity compared with the single mutant; contains two FEX domains connected by a linker; part of a widespread family of conserved fluoride export proteins","termid":"PBO:0085630"}


id: MONDO:0800302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease I","termid":"MONDO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease Id","secondary_identifiers":["MEDGEN:87456","UMLS:C0342750"],"synonyms":[{"name":"GSD1D","type":"exact"}],"termid":"MONDO:0800302","xrefs":{"Monarch":{"xref_id":"0800302"}}}


id: PBO:0070418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 3","termid":"PBO:0070418"}


id: FYPO:0001206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which maltase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maltase activity","termid":"FYPO:0001184"},{"relation_name":"is_a","term_name":"abolished alpha-glucosidase activity","termid":"FYPO:0001205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished maltase activity","synonyms":[{"name":"maltase activity abolished","type":"exact"}],"termid":"FYPO:0001206"}


id: FYPO:0003214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to glucose starvation","synonyms":[{"name":"normal protein phosphorylation during cellular response to glucose depletion","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose deprivation","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose limitation","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0003214"}


id: PBO:0005793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein DP1/Yop1","termid":"PBO:0005793"}


id: MONDO:0035402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated exencephaly","secondary_identifiers":["ICD10CM:Q00.0","Orphanet:563612","GARD:22255"],"termid":"MONDO:0035402","xrefs":{"Monarch":{"xref_id":"0035402"}}}


id: PBO:0079832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uromodulin like 1","termid":"PBO:0079832"}


id: PBO:0031461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_conjugation_frequency","termid":"PBO:0031461"}


id: MONDO:0028741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete overgrowth or tall stature syndrome with skeletal involvement (obsolete MONDO:0028741)","termid":"MONDO:0028741","xrefs":{"Monarch":{"xref_id":"0028741"}}}


id: PBO:0077250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMED2 divergent transcript","termid":"PBO:0077250"}


id: PR:Q96VG1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TP53-regulated inhibitor of apoptosis 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21329:SF8","PRO:DNx","OMA:SCHPO02571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C119.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.18","secondary_identifiers":["UniProtKB:Q96VG1"],"synonyms":[{"name":"Spom972h-TRIAP1","type":"exact"}],"termid":"PR:Q96VG1"}


id: GO:0009328
data:
  {"annotated_genes":["SJAG_02206","SJAG_03626"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77174,78657],"is_not":false,"summary":null,"term":"GO:0009328"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the ligation of phenylalanine to tRNA(Phe), forming L-phenylalanyl-tRNA(Phe).","definition_xrefs":["PMID:20223217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_03626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phenylalanine-tRNA ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0009328","terms_by_termid":{"GO:0009328":null}}


id: GO:0102791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butein 4'-beta-D-glucoside + O2 + 2 H+ = sulfuretin 6-glucoside + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfuretin synthase activity (obsolete GO:0102791)","termid":"GO:0102791"}


id: MONDO:0007832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon antiviral depressor","secondary_identifiers":["OMIM:147560","MEDGEN:333493","UMLS:C1840150"],"synonyms":[{"name":"interferon antiviral depressor","type":"exact"}],"termid":"MONDO:0007832","xrefs":{"Monarch":{"xref_id":"0007832"}}}


id: GO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"},{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"terpenoid catabolic process","synonyms":[{"name":"terpenoid breakdown","type":"exact"},{"name":"terpenoid catabolism","type":"exact"},{"name":"terpenoid degradation","type":"exact"}],"termid":"GO:0016115"}


id: PR:O60174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc6 gene.","definition_xrefs":["UniProtKB:O60174","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.05","synonyms":[{"name":"Spom972h-sfc6","type":"exact"},{"name":"TFIIIC subunit sfc6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60174"}


id: FYPO:0002010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally induced during iron ion starvation measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of iron ion starvation-induced proteins","synonyms":[{"name":"increased level of iron ion depletion-induced proteins","type":"exact"},{"name":"increased level of iron ion deprivation-induced proteins","type":"exact"},{"name":"increased level of iron ion starvation-induced proteins during mitotic cell cycle","type":"related"},{"name":"increased level of iron ion starvation-induced proteins during vegetative growth","type":"exact"},{"name":"increased level of proteins expressed during iron ion starvation","type":"exact"},{"name":"increased level of proteins induced by iron ion starvation","type":"exact"},{"name":"increased protein level of genes (normally) induced during iron starvation","type":"exact"}],"termid":"FYPO:0002010"}


id: PBO:0068265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 2","termid":"PBO:0068265"}


id: MONDO:0044204
data:
  {"annotated_genes":["SJAG_00487","SJAG_03684","SJAG_04491","SJAG_04991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86001,86002,86003,86004],"is_not":false,"summary":null,"term":"MONDO:0044204"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Shwachman-Diamond syndrome","termid":"MONDO:0009833"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00487":null,"SJAG_03684":null,"SJAG_04491":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Shwachman-Diamond syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15221","MEDGEN:1640046","OMIM:260400","UMLS:C4692625"],"synonyms":[{"name":"SDS1","type":"related"},{"name":"Shwachman-Bodian syndrome","type":"related"},{"name":"Shwachman-Diamond syndrome","type":"related"},{"name":"Shwachman-Diamond syndrome 1","type":"exact"},{"name":"lipomatosis of pancreas, congenital","type":"related"},{"name":"pancreatic insufficiency and bone marrow dysfunction","type":"related"}],"termid":"MONDO:0044204","terms_by_termid":{"MONDO:0044204":null},"xrefs":{"Monarch":{"xref_id":"0044204"}}}


id: PR:O13453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase pmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.01","synonyms":[{"name":"Spom972h-pmp1","type":"exact"}],"termid":"PR:O13453"}


id: PBO:0039040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 2","termid":"PBO:0039040"}


id: MONDO:0010644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteinuria","termid":"MONDO:0003634"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"proteinuria, low molecular weight, with hypercalciuria and nephrocalcinosis","secondary_identifiers":["DOID:0111815","GARD:15301","MESH:C545036","MEDGEN:333426","UMLS:C1839874","OMIM:308990"],"synonyms":[{"name":"proteinuria, low molecular weight, with hypercalciuria and nephrocalcinosis","type":"exact"},{"name":"proteinuria, low molecular weight, with hypercalciuric nephrocalcinosis, X-linked recessive","type":"exact"}],"termid":"MONDO:0010644","xrefs":{"Monarch":{"xref_id":"0010644"}}}


id: PBO:0091090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Gsk31","termid":"PBO:0091090"}


id: MONDO:0015715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe hemophilia B is a form of hemophilia B characterized by a large deficiency of factor IX leading to frequent spontaneous hemorrhage and abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B","termid":"MONDO:0010604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"severe hemophilia B","secondary_identifiers":["UMLS:C5679576","GARD:17056","MEDGEN:1826004"],"synonyms":[{"name":"severe factor IX deficiency","type":"exact"},{"name":"severe haemophilia type B","type":"exact"},{"name":"severe hemophilia type B","type":"exact"}],"termid":"MONDO:0015715","xrefs":{"Monarch":{"xref_id":"0015715"}}}


id: MONDO:0018889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of beta-myosin heavy chain (MYH7)","termid":"MONDO:0016195"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"hyaline body myopathy","secondary_identifiers":["GARD:7148","DOID:0111267","icd11.foundation:352828432","Orphanet:53698"],"synonyms":[{"name":"myosin storage myopathy","type":"exact"}],"termid":"MONDO:0018889","xrefs":{"Monarch":{"xref_id":"0018889"}}}


id: PATO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Affecting a segment or segments.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmental","termid":"PATO:0002404"}


id: PBO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Azr1","termid":"PBO:0002222"}


id: PBO:0057594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 924","termid":"PBO:0057594"}


id: GO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any component or product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","GOC:pg","ISBN:0781735149","GOC:ai","PMID:11884446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement receptor activity","secondary_identifiers":["GO:0004942"],"synonyms":[{"name":"anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004875"}


id: PBO:0060760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 4","termid":"PBO:0060760"}


id: MONDO:0015012
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86588],"is_not":false,"summary":null,"term":"MONDO:0015012"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder","termid":"MONDO:0100365"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis-plus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:505248","UMLS:C4310627","SCTID:1187113001","GARD:17944","MEDGEN:934594","OMIM:617303"],"synonyms":[{"name":"MPSPS","type":"exact"},{"name":"mucopolysaccharidosis-like plus disease","type":"exact"},{"name":"mucopolysaccharidosis-like syndrome with congenital heart defects and hematopoietic disorders","type":"exact"},{"name":"mucopolysaccharidosis-plus syndrome","type":"exact"}],"termid":"MONDO:0015012","terms_by_termid":{"MONDO:0015012":null},"xrefs":{"Monarch":{"xref_id":"0015012"}}}


id: GO:0075293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the pH conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host pH environment","synonyms":[{"name":"response of symbiont to host pH environment","type":"exact"}],"termid":"GO:0075293"}


id: PBO:0084324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin/importin that interacts with the nuclear pore complex; acts as the nuclear import receptor for specific proteins, including Pdr1p, Yap1p, Ste12p, and Aft1p; required for stability of the Dam1p-Duo1p complex","termid":"PBO:0084324"}


id: PBO:0029092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029092"}


id: GO:0015668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give double-stranded fragments with terminal 5'-phosphates. ATP hydrolysis is required. Cleavage is dependent on the presence of two copies of a specific recognition sequence in an inverse orientation in the DNA. Cleavage occurs at a specific distance from one of the recognition sites.","definition_xrefs":["PMID:12654995","EC:3.1.21.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0140097","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"type III site-specific deoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.5-RXN"],"synonyms":[{"name":"type III restriction enzyme activity","type":"exact"}],"termid":"GO:0015668"}


id: GO:0003389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a neuronal projection over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrograde extension","termid":"GO:0003389"}


id: GO:0030747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-pyruvate + S-adenosyl-L-methionine = (R)-3-(indol-3-yl)-2-oxobutanoate + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"indolepyruvate C-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-17530","RHEA:12112"],"synonyms":[{"name":"S-adenosyl-L-methionine:(indol-3-yl)pyruvate C-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:indolepyruvate C-methyltransferase activity","type":"related"},{"name":"indolepyruvate 3-methyltransferase activity","type":"related"},{"name":"indolepyruvate methyltransferase activity","type":"related"},{"name":"indolepyruvic acid methyltransferase activity","type":"related"}],"termid":"GO:0030747"}


id: MONDO:1012236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia and bladder aplasia-hypoplasia, non-human animal","termid":"MONDO:1011910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia and bladder aplasia-hypoplasia, sheep","secondary_identifiers":["OMIA:000857-9940"],"termid":"MONDO:1012236","xrefs":{"Monarch":{"xref_id":"1012236"}}}


id: MONDO:0016329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial syndrome associated with hypertrophic cardiomyopathy (obsolete MONDO:0016329)","termid":"MONDO:0016329","xrefs":{"Monarch":{"xref_id":"0016329"}}}


id: GO:0051931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception, the series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"regulates","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception","termid":"GO:0051931"}


id: PBO:0092019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan (cca), mitochondrial","termid":"PBO:0092019"}


id: PBO:0073264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 8","termid":"PBO:0073264"}


id: GO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte homeostasis","synonyms":[{"name":"immune cell homeostasis","type":"exact"},{"name":"leucocyte homeostasis","type":"exact"}],"termid":"GO:0001776"}


id: MONDO:0015812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary cutaneous gamma/delta-positive T-cell lymphoma is a rare, usually aggressive, subtype of cutaneous T-cell lymphoma characterized by infiltration of the epidermis, dermis or subcutaneous tissue by a clonal population of mature, gamma/delta positive cytotoxic T-cells. Typically it presents with ulcerating plaques, tumors, or subcutaneous nodules on the skin of the extremities, however, frequent involvement of mucosal and extranodal sites (such as the nasal cavity, gastrointestinal tract or lungs) is also observed. Cases associated with panniculitis may present with hemophagocytic syndrome (abrupt onset of fever, rash, cytopenia, hepatosplenomegaly and neurological compromise). Infiltration of lymph nodes, spleen and bone marrow is uncommon and resistance to multilineage chemotherapy is reported.","definition_xrefs":["Orphanet:178533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell lymphoma","termid":"MONDO:0015758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"primary cutaneous gamma/delta-positive T-cell lymphoma","secondary_identifiers":["GARD:20158","ICD10CM:C84.4"],"termid":"MONDO:0015812","xrefs":{"Monarch":{"xref_id":"0015812"}}}


id: PBO:0075997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP3 antisense RNA 1","termid":"PBO:0075997"}


id: PBO:0044466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily Z member 1","termid":"PBO:0044466"}


id: GO:0035248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an acceptor molecule, forming an alpha-1,4 linkage.","definition_xrefs":["PMID:15130086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-1,4-N-acetylgalactosaminyltransferase activity","synonyms":[{"name":"alpha-1,4-GalNAc transferase activity","type":"exact"}],"termid":"GO:0035248"}


id: PBO:0041002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORA aurora kinase A activator","termid":"PBO:0041002"}


id: GO:0072432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of G1/S transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to G1 DNA damage checkpoint signaling","synonyms":[{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0072432"}


id: GO:0010021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amylopectin, the (1->4) linked alpha glucose units with alpha-(1->6) linkages.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin biosynthetic process","synonyms":[{"name":"amylopectin anabolism","type":"exact"},{"name":"amylopectin biosynthesis","type":"exact"},{"name":"amylopectin formation","type":"exact"},{"name":"amylopectin synthesis","type":"exact"}],"termid":"GO:0010021"}


id: PBO:0068286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit C","termid":"PBO:0068286"}


id: MONDO:0026765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIr","secondary_identifiers":["OMIM:301045","MEDGEN:1717186","UMLS:C5393313"],"synonyms":[{"name":"CDG IIr","type":"related"},{"name":"CDG2R","type":"related"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIr","type":"related"},{"name":"congenital disorder of glycosylation, type IIr, X-linked recessive","type":"exact"}],"termid":"MONDO:0026765","xrefs":{"Monarch":{"xref_id":"0026765"}}}


id: PBO:0111967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dsl1/NZR complex secretory pathway protein RINT1 family","termid":"PBO:0111967"}


id: GO:0035336
data:
  {"annotated_genes":["SJAG_04007","SJAG_03909","SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77014,78711],"is_not":false,"summary":null,"term":"GO:0035336"},{"annotations":[107274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0055086","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acyl CoA metabolic process","type":"exact"},{"name":"long-chain fatty acyl-CoA metabolism","type":"exact"}],"termid":"GO:0035336","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: GO:0106161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of small RNA loading onto RISC.","definition_xrefs":["GOC:ha","PMID:29775584"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of small RNA loading onto RISC (obsolete GO:0106161)","termid":"GO:0106161"}


id: SO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The R segment of the long terminal repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_LTR_region","synonyms":[{"name":"R LTR region","type":"exact"},{"name":"R long terminal repeat region","type":"exact"}],"termid":"SO:0000423"}


id: PBO:0077348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 88","termid":"PBO:0077348"}


id: PBO:0086099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein related to mammalian high mobility group (HMG) proteins; nuclear protein; essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing","termid":"PBO:0086099"}


id: GO:0061324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The canonical Wnt signaling pathway that contributes to the modulation of the expansion of a population of cardiac outflow tract cells.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation (obsolete GO:0061324)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of cardiac outflow tract cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation","type":"exact"}],"termid":"GO:0061324"}


id: GO:1902734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor-mediated virion attachment to host cell.","definition_xrefs":["GOC:TermGenie","PMID:18385238","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor-mediated virion attachment to host cell","synonyms":[{"name":"regulation of virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:1902734"}


id: GO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The dehydration of peptidyl-serine, followed by hydrogenation to produce peptidyl-D-alanine.","definition_xrefs":["RESID:AA0191"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-D-alanine racemization via peptidyl-L-serine (obsolete GO:0019917)","termid":"GO:0019917"}


id: PBO:0045950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 6","termid":"PBO:0045950"}


id: PBO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter Itr1","termid":"PBO:0001652"}


id: PBO:0084898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation release factor; involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability","termid":"PBO:0084898"}


id: PBO:0047985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member B","termid":"PBO:0047985"}


id: PBO:0004035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus1 (predicted)","termid":"PBO:0004035"}


id: PBO:0040453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP11A upstream neighbor lncRNA","termid":"PBO:0040453"}


id: GO:0052784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of reuteran, a soluble glucan polymer with mainly alpha-(1->4) glycosidic linkages and significant amounts of alpha-(1->6) and alpha-(1->4,6) glucosidic linkages.","definition_xrefs":["PMID:15256553","PMID:16000808","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"reuteran metabolic process","termid":"GO:0052783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"reuteran biosynthetic process","synonyms":[{"name":"reuteransucrase-mediated reuteran biosynthesis","type":"narrow"}],"termid":"GO:0052784"}


id: PBO:0060653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 2","termid":"PBO:0060653"}


id: PATO:0001492
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth rate","termid":"PATO:0001492"}


id: PATO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An emergent molecular quality that arises by virtue of the bearer's disposition to exhibit molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesivity","synonyms":[{"name":"adhesiveness","type":"exact"},{"name":"stickiness","type":"related"}],"termid":"PATO:0001431"}


id: PBO:0059404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 1","termid":"PBO:0059404"}


id: PBO:0041626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cache domain containing 1","termid":"PBO:0041626"}


id: FYPO:0002324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lanosterol measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular sterol level","termid":"FYPO:0002326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular lanosterol level","synonyms":[{"name":"decreased cellular lanosterol level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lanosterol level during vegetative growth","type":"exact"},{"name":"decreased ergosterol accumulation","type":"related"},{"name":"reduced cellular lanosterol level","type":"exact"}],"termid":"FYPO:0002324"}


id: PBO:0062256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 3 pseudogene","termid":"PBO:0062256"}


id: PBO:0042405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 16","termid":"PBO:0042405"}


id: PBO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.42","termid":"PBO:0003190"}


id: PBO:0027843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_double-strand_break_site","termid":"PBO:0027843"}


id: GO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vinculin-containing myofibril attachment structure of striated muscle that connects sarcomeres to the extracellular matrix. In nematode body wall muscle, the dense body performs the dual role of Z-disk and costamere.","definition_xrefs":["PMID:17492481","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"striated muscle dense body","termid":"GO:0055120"}


id: PBO:0000649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc19","termid":"PBO:0000649"}


id: MONDO:0007538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the FAM83H gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcified amelogenesis imperfecta","termid":"MONDO:0968955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, type 3A","secondary_identifiers":["OMIM:130900","UMLS:C5886770","MESH:C562880","MEDGEN:1854533","SCTID:109471001","DOID:0110055"],"synonyms":[{"name":"ADHCAI","type":"exact"},{"name":"AI3","type":"exact"},{"name":"AI3A","type":"related"},{"name":"FAM83H amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in FAM83H","type":"exact"},{"name":"amelogenesis imperfecta hypomineralization type","type":"broad"},{"name":"amelogenesis imperfecta type 3","type":"broad"},{"name":"amelogenesis imperfecta type 3A","type":"related"},{"name":"amelogenesis imperfecta type III","type":"broad"},{"name":"amelogenesis imperfecta, hypocalcification type, autosomal dominant","type":"related"},{"name":"amelogenesis imperfecta, hypomineralization type","type":"related"},{"name":"amelogenesis imperfecta, type 3","type":"related"},{"name":"amelogenesis imperfecta, type 3A","type":"exact"},{"name":"amelogenesis imperfecta, type III","type":"related"},{"name":"amelogenesis imperfecta, type IIIA","type":"related"},{"name":"autosomal dominant amelogenesis imperfecta hypocalcification type","type":"exact"}],"termid":"MONDO:0007538","xrefs":{"Monarch":{"xref_id":"0007538"}}}


id: PBO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 27","termid":"PBO:0046528"}


id: GO:0106154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing flask-shaped fruiting bodies, called perithecia. In the ascomycetous fungi such as Neurospora crassa and Sordaria macrospora, these perithecia are formed in the sexual phase and they discharge ascospores through the ostiolum at the tip of the perithecial neck.","definition_xrefs":["DOI:10.1007/978-3-642-00286-1_2","PMID:25311923","PMID:21134480","GOC:ach","PMID:19547974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perithecium development","termid":"GO:0120165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perithecium formation","termid":"GO:0106154"}


id: GO:0007527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult somatic muscle development","termid":"GO:0007527"}


id: GO:0006148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine metabolic process","termid":"GO:0046102"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"inosine catabolic process","synonyms":[{"name":"inosine breakdown","type":"exact"},{"name":"inosine catabolism","type":"exact"},{"name":"inosine degradation","type":"exact"}],"termid":"GO:0006148"}


id: FYPO:0001659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular cAMP level","synonyms":[{"name":"abnormal cellular cAMP accumulation","type":"related"},{"name":"abnormal cellular cAMP level","type":"exact"},{"name":"altered cellular cyclic AMP level","type":"exact"}],"termid":"FYPO:0001659"}


id: GO:1905865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Atg1/ULK1 kinase complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:autophagy","PMID:26567215","GOC:TermGenie","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of Atg1/ULK1 kinase complex assembly","termid":"GO:1905864"},{"relation_name":"negatively_regulates","term_name":"Atg1/ULK1 kinase complex assembly","termid":"GO:1904745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"down regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"down regulation of ATG1 kinase complex formation","type":"exact"},{"name":"down regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"down regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"down regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"down regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"down regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"down regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"down regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"down regulation of Atg1p signalling complex formation","type":"exact"},{"name":"down regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"down regulation of ULK1 signaling complex formation","type":"exact"},{"name":"down regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"down regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"down regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"down regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"down-regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"down-regulation of ATG1 kinase complex formation","type":"exact"},{"name":"down-regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"down-regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"down-regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"down-regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"down-regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"down-regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"down-regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"down-regulation of Atg1p signalling complex formation","type":"exact"},{"name":"down-regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"down-regulation of ULK1 signaling complex formation","type":"exact"},{"name":"down-regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"down-regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"down-regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"down-regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"downregulation of ATG1 kinase complex assembly","type":"exact"},{"name":"downregulation of ATG1 kinase complex formation","type":"exact"},{"name":"downregulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"downregulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"downregulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"downregulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"downregulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"downregulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"downregulation of Atg1p signalling complex assembly","type":"exact"},{"name":"downregulation of Atg1p signalling complex formation","type":"exact"},{"name":"downregulation of ULK1 signaling complex assembly","type":"exact"},{"name":"downregulation of ULK1 signaling complex formation","type":"exact"},{"name":"downregulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"downregulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"downregulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"downregulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"inhibition of ATG1 kinase complex assembly","type":"narrow"},{"name":"inhibition of ATG1 kinase complex formation","type":"narrow"},{"name":"inhibition of ATG1-ATG13 complex assembly","type":"narrow"},{"name":"inhibition of ATG1-ATG13 complex formation","type":"narrow"},{"name":"inhibition of ATG1/ULK1 kinase complex assembly","type":"narrow"},{"name":"inhibition of ATG1/ULK1 kinase complex formation","type":"narrow"},{"name":"inhibition of ATG1/ULK1 signaling complex assembly","type":"narrow"},{"name":"inhibition of ATG1/ULK1 signaling complex formation","type":"narrow"},{"name":"inhibition of Atg1p signalling complex assembly","type":"narrow"},{"name":"inhibition of Atg1p signalling complex formation","type":"narrow"},{"name":"inhibition of ULK1 signaling complex assembly","type":"narrow"},{"name":"inhibition of ULK1 signaling complex formation","type":"narrow"},{"name":"inhibition of ULK1-ATG13-FIP200 complex assembly","type":"narrow"},{"name":"inhibition of ULK1-ATG13-FIP200 complex formation","type":"narrow"},{"name":"inhibition of ULK1-ATG13-RB1CC1 complex assembly","type":"narrow"},{"name":"inhibition of ULK1-ATG13-RB1CC1 complex formation","type":"narrow"},{"name":"negative regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"negative regulation of ATG1 kinase complex formation","type":"exact"},{"name":"negative regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"negative regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"negative regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"negative regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"negative regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"negative regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"negative regulation of Atg1p signalling complex formation","type":"exact"},{"name":"negative regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"negative regulation of ULK1 signaling complex formation","type":"exact"},{"name":"negative regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"negative regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"negative regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"negative regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1905865"}


id: PBO:0069883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1171, pseudogene","termid":"PBO:0069883"}


id: MONDO:0016614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive ataxia due to PEX10 deficiency","secondary_identifiers":["Orphanet:247815","UMLS:C5679614","MEDGEN:1843173","GARD:20666"],"synonyms":[{"name":"mild peroxismal disorder due to PEX10 deficiency","type":"exact"}],"termid":"MONDO:0016614","xrefs":{"Monarch":{"xref_id":"0016614"}}}


id: PBO:0028132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0028132"}


id: PBO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug117","termid":"PBO:0005432"}


id: MOD:00508
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:14588022","Unimod:140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISD a-series (C-Term)","synonyms":[{"name":"ISD a-series (C-Term)","type":"related"},{"name":"a-type-ion","type":"related"}],"termid":"MOD:00508"}


id: MONDO:0958231
data:
  {"annotated_genes":["SJAG_00686"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86858],"is_not":false,"summary":null,"term":"MONDO:0958231"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with motor abnormalities, seizures, and facial dysmorphism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620719"],"termid":"MONDO:0958231","terms_by_termid":{"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0958231"}}}


id: GO:0019383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-camphor, a bicyclic monoterpene ketone.","definition_xrefs":["MetaCyc:P601-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid catabolic process","termid":"GO:0016100"},{"relation_name":"is_a","term_name":"(+)-camphor metabolic process","termid":"GO:0018882"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"(+)-camphor catabolic process","secondary_identifiers":["UM-BBD_pathwayID:cam"],"synonyms":[{"name":"(+)-camphor breakdown","type":"exact"},{"name":"(+)-camphor catabolism","type":"exact"},{"name":"(+)-camphor degradation","type":"exact"}],"termid":"GO:0019383"}


id: GO:0102122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A34 + S-adenosyl-L-methionine = gibberellin A34 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A34 carboxyl methyltransferase activity (obsolete GO:0102122)","termid":"GO:0102122"}


id: GO:0051191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"part_of","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prosthetic group biosynthetic process","synonyms":[{"name":"coenzyme and prosthetic group biosynthesis","type":"broad"},{"name":"coenzyme and prosthetic group biosynthetic process","type":"broad"},{"name":"prosthetic group anabolism","type":"exact"},{"name":"prosthetic group biosynthesis","type":"exact"},{"name":"prosthetic group formation","type":"exact"},{"name":"prosthetic group synthesis","type":"exact"}],"termid":"GO:0051191"}


id: PBO:0062429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 90 pseudogene","termid":"PBO:0062429"}


id: FYPO:0002874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"premature protein localization to cell division site","termid":"FYPO:0007829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"premature protein localization to medial cortex during vegetative growth","synonyms":[{"name":"advanced protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"faster protein localization to medial cortex during vegetative growth","type":"related"},{"name":"premature protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"premature protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"premature protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0002874"}


