# terms

id: GO:0004637
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70320],"is_not":false,"summary":null,"term":"GO:0004637"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-D-ribosylamine + ATP + glycine = N(1)-(5-phospho-D-ribosyl)glycinamide + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.4.13","RHEA:17453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R04144","MetaCyc:GLYRIBONUCSYN-RXN","Reactome:R-HSA-73814"],"synonyms":[{"name":"2-amino-N-ribosylacetamide 5'-phosphate kinosynthase activity","type":"related"},{"name":"5'-phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"5-phospho-D-ribosylamine:glycine ligase (ADP-forming)","type":"related"},{"name":"GAR","type":"related"},{"name":"GAR synthetase activity","type":"related"},{"name":"GARS activity","type":"related"},{"name":"glycinamide ribonucleotide synthetase activity","type":"related"},{"name":"glycineamide ribonucleotide synthetase activity","type":"related"},{"name":"phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"phosphoribosylglycineamide synthetase activity","type":"related"}],"termid":"GO:0004637","terms_by_termid":{"GO:0004637":null}}


id: FYPO:0007032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased protein glycosylation during vegetative growth","synonyms":[{"name":"increased protein glycosylation during mitotic cell cycle","type":"related"},{"name":"protein hyperglycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007032"}


id: PBO:0082817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved mitochondrial protein of unknown function; processed by both mitochondrial processing peptidase and mitochondrial octapeptidyl aminopeptidase; gene contains the nested antisense gene NAG1","termid":"PBO:0082817"}


id: MONDO:0020947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild to severe infections of the eye and its adjacent structures (adnexa) by adult or larval protozoan or metazoan parasites.","definition_xrefs":["MESH:D015822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic eye infection","secondary_identifiers":["SCTID:312418006","ICD9:136.9","UMLS:C0015406","MEDGEN:8752"],"synonyms":[{"name":"EYE INFECT PARASITIC","type":"related"},{"name":"Eye Infection, Parasitic","type":"related"},{"name":"Eye Infections, Parasitic","type":"related"},{"name":"Infection, Parasitic Eye","type":"related"},{"name":"Infection, Parasitic Ocular","type":"related"},{"name":"Infections, Parasitic Eye","type":"related"},{"name":"Infections, Parasitic Ocular","type":"related"},{"name":"OCULAR INFECT PARASITIC","type":"related"},{"name":"Ocular Infection, Parasitic","type":"related"},{"name":"Ocular Infections, Parasitic","type":"related"},{"name":"PARASITIC EYE INFECT","type":"related"},{"name":"Parasitic Eye Infection","type":"related"},{"name":"Parasitic Eye Infections","type":"related"},{"name":"Parasitic Ocular Infection","type":"related"},{"name":"Parasitic Ocular Infections","type":"related"},{"name":"Parasitic eye infection","type":"related"},{"name":"parasitic eye infection","type":"exact"}],"termid":"MONDO:0020947","xrefs":{"Monarch":{"xref_id":"0020947"}}}


id: PBO:0048059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 8","termid":"PBO:0048059"}


id: PBO:0039859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 23 pseudogene 1","termid":"PBO:0039859"}


id: PBO:0086846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pyridoxine 4-dehydrogenase; differentially expressed during alcoholic fermentation; expression activated by transcription factor YRM1/YOR172W; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086846"}


id: PBO:0080273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 36 pseudogene","termid":"PBO:0080273"}


id: MONDO:0009112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any rhizomelic chondrodysplasia punctata in which the cause of the disease is a mutation in the GNPAT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhizomelic chondrodysplasia punctata","termid":"MONDO:0015776"},{"relation_name":"is_a","term_name":"glyceronephosphate O-acyltransferase deficiency","termid":"MONDO:0100273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0002525","MONDO:0019053"],"is_obsolete":false,"name":"rhizomelic chondrodysplasia punctata type 2","secondary_identifiers":["MEDGEN:341734","DOID:0110852","MESH:C537607","NANDO:1200771","Orphanet:309796","UMLS:C1857242","icd11.foundation:179969811","OMIM:222765","GARD:9429"],"synonyms":[{"name":"Dhapat deficiency","type":"exact"},{"name":"Dihydroxyacetonephosphate acyltransferase deficiency","type":"exact"},{"name":"GNPAT rhizomelic chondrodysplasia punctata","type":"exact"},{"name":"Glyceronephosphate O-acyltransferase deficiency","type":"exact"},{"name":"Gnpat deficiency","type":"exact"},{"name":"RCDP2","type":"exact"},{"name":"Rcdp2","type":"exact"},{"name":"chondrodysplasia punctata, rhizomelic, due to Dihydroxyacetonephosphate acyltransferase deficiency","type":"exact"},{"name":"chondrodysplasia punctata, rhizomelic, due to dihydroxyacetonephosphate","type":"related"},{"name":"peroxisomal dihydroxyacetonephosphate acyltransferase deficiency","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata caused by mutation in GNPAT","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata type 2","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata, type 2","type":"exact"},{"name":"type 2 rhizomelic chondrodysplasia punctata","type":"exact"}],"termid":"MONDO:0009112","xrefs":{"Monarch":{"xref_id":"0009112"}}}


id: PBO:0060396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2","termid":"PBO:0060396"}


id: GO:0032026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnesium ion","termid":"GO:0032026"}


id: GO:0042814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarized growth from one end of a cell.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monopolar cell growth","synonyms":[{"name":"monopolar cell elongation","type":"narrow"},{"name":"monopolar growth","type":"broad"},{"name":"polar cell elongation","type":"narrow"}],"termid":"GO:0042814"}


id: MONDO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144","xrefs":{"Monarch":{"xref_id":"0000144"}}}


id: GO:0047138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 cob(II)alamin + NAD+ = 2 aquacob(III)alamin + NADH + H+.","definition_xrefs":["MetaCyc:1.6.99.12-RXN","EC:1.16.1.3"],"gene_count":0,"genotype_count":0,"name":"obsolete aquacobalamin reductase activity (obsolete GO:0047138)","synonyms":[{"name":"B(12a) reductase activity","type":"related"},{"name":"B12a reductase activity","type":"related"},{"name":"NADH-linked aquacobalamin reductase activity","type":"related"},{"name":"NADH2:cob(III)alamin oxidoreductase activity","type":"related"},{"name":"NADH:cob(III)alamin oxidoreductase activity","type":"related"},{"name":"aquocobalamin reductase activity","type":"related"},{"name":"cob(II)alamin:NAD+ oxidoreductase activity","type":"related"},{"name":"vitamin B(12a) reductase activity","type":"related"},{"name":"vitamin B12a reductase activity","type":"related"}],"termid":"GO:0047138"}


id: PBO:0057092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 188","termid":"PBO:0057092"}


id: PBO:0048772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geminin coiled-coil domain containing","termid":"PBO:0048772"}


id: PBO:0030625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_tyrosine_phosphorylation","termid":"PBO:0030625"}


id: GO:0071826
data:
  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assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E 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wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02621","SJAG_04280","SJAG_03689","SJAG_04464","SJAG_00118","SJAG_03118","SJAG_00871","SJAG_04522"],"name":"cellular physical quality phenotype during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04703","SJAG_01794","SJAG_03048","SJAG_02763","SJAG_00514","SJAG_04280","SJAG_04551","SJAG_03581","SJAG_04332","SJAG_04522","SJAG_01906","SJAG_03940","SJAG_04312","SJAG_01834","SJAG_02819","SJAG_02392","SJAG_04697","SJAG_00028","SJAG_03575","SJAG_01745","SJAG_00426","SJAG_00266","SJAG_02013","SJAG_03351","SJAG_03449","SJAG_01956","SJAG_01143","SJAG_00409","SJAG_03250","SJAG_03453","SJAG_03689","SJAG_02592","SJAG_04464","SJAG_00118"],"single_locus_genotype_uniquenames":["pka1delta","man1delta","gef1delta","pyp1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","sst4delta","sty1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","ned1delta","pom152delta","pom1delta","mid2delta","efc25delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","for3delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","scd1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta","pmk1delta","scd2delta","rga4delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","ras1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","atf1delta","gms1delta","rga6delta","mid1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","gpd1delta","dcr1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cellular physical object quality phenotype during vegetative growth","type":"exact"},{"name":"cellular physical quality phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular physical object quality phenotype during vegetative 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id: GO:0106389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an ecdysteroid + ATP = an ecdysteroid 22-phosphate + ADP + H+.","definition_xrefs":["RHEA:67972","PMID:16899460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ecdysteroid 22-kinase activity","secondary_identifiers":["MetaCyc:RXN-14755"],"synonyms":[{"name":"EcKinase","type":"related"}],"termid":"GO:0106389"}


id: FYECO:0000158
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes the growth of a cell population until it reaches stationary phase, i.e. a state in which cell growth division are offset by cell death, such that the cell density is stable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth to stationary phase","termid":"FYECO:0000158"}


id: MONDO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild to moderate high blood pressure that is caused by an underlying medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hypertension","termid":"MONDO:0001200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign secondary hypertension","secondary_identifiers":["ICD9:405.19","SCTID:194785008","UMLS:C0155620","DOID:13143","MEDGEN:57610","ICD9:405.1"],"termid":"MONDO:0001646","xrefs":{"Monarch":{"xref_id":"0001646"}}}


id: PBO:0112881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate dehydrogenase adaptor subunit Ymr31/Kgd4","termid":"PBO:0112881"}


id: PBO:0042266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 1","termid":"PBO:0042266"}


id: GO:0031130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which one cell or group of cells sends a signal over a short range to another cell or group of cells of different ancestry and developmental potential, thereby effecting a developmental change in the latter.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete creation of an inductive signal (obsolete GO:0031130)","termid":"GO:0031130"}


id: MONDO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the sweat glands.","definition_xrefs":["NCIT:C4810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland neoplasm","termid":"MONDO:0002381"},{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"sweat gland cancer","secondary_identifiers":["UMLS:C1321904","DOID:2095","MEDGEN:231171"],"synonyms":[{"name":"cancer of sweat gland","type":"exact"},{"name":"malignant neoplasm of sweat gland","type":"exact"},{"name":"malignant neoplasm of the sweat gland","type":"exact"},{"name":"malignant sweat gland neoplasm","type":"exact"},{"name":"malignant tumor of sweat gland","type":"exact"},{"name":"malignant tumor of the sweat gland","type":"exact"},{"name":"malignant tumour of sweat gland","type":"exact"},{"name":"malignant tumour of the sweat gland","type":"exact"},{"name":"sweat gland cancer","type":"exact"},{"name":"sweat gland neoplasms, malignant","type":"exact"}],"termid":"MONDO:0002206","xrefs":{"Monarch":{"xref_id":"0002206"}}}


id: PBO:0030943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_depolymerization","termid":"PBO:0030943"}


id: MONDO:0044787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, keratinizing or non-keratinizing squamous cell carcinoma arising from the mucosal epithelium of the nasal cavity or the paranasal sinuses. It affects most often the maxillary sinus. Less frequently, it arises from the nasal cavity, ethmoid sinus, sphenoid sinus, and frontal sinus. Symptoms include nasal fullness, epistaxis, rhinorhea, pain, and paresthesia. Patients with nasal squamous cell carcinoma usually present earlier than patients with maxillary sinus carcinoma and have a better prognosis compared to the latter group.","definition_xrefs":["NCIT:C68611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"},{"relation_name":"is_a","term_name":"nasal cavity and paranasal sinus carcinoma","termid":"MONDO:0056819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity and paranasal sinus squamous cell carcinoma","secondary_identifiers":["UMLS:C0280332","MEDGEN:124722"],"synonyms":[{"name":"nasal cavity and paranasal sinus squamous cell cancer","type":"exact"},{"name":"nasal cavity and paranasal sinus squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0044787","xrefs":{"Monarch":{"xref_id":"0044787"}}}


id: GO:2000718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"is_a","term_name":"regulation of centromeric sister chromatid cohesion","termid":"GO:0070602"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000718"}


id: PBO:0066902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 203","termid":"PBO:0066902"}


id: MONDO:0006324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of many genes expressed by adipose and other non-epithelial tissues.","definition_xrefs":["NCIT:C53557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"normal breast-like subtype of breast carcinoma","secondary_identifiers":["EFO:1000402","MEDGEN:771111","UMLS:C3642471"],"synonyms":[{"name":"normal breast-like subtype of breast cancer","type":"exact"},{"name":"normal breast-like subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0006324","xrefs":{"Monarch":{"xref_id":"0006324"}}}


id: PBO:0028871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_tail_length","termid":"PBO:0028871"}


id: GO:1902210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bacterial-type flagellum assembly.","definition_xrefs":["GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum assembly","termid":"GO:1902208"},{"relation_name":"positively_regulates","term_name":"bacterial-type flagellum assembly","termid":"GO:0044780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of bacterial-type flagellum assembly","synonyms":[{"name":"activation of bacterial flagellum assembly","type":"narrow"},{"name":"activation of bacterial-type flagellum assembly","type":"narrow"},{"name":"positive regulation of bacterial flagellum assembly","type":"exact"},{"name":"up regulation of bacterial flagellum assembly","type":"exact"},{"name":"up regulation of bacterial-type flagellum assembly","type":"exact"},{"name":"up-regulation of bacterial flagellum assembly","type":"exact"},{"name":"up-regulation of bacterial-type flagellum assembly","type":"exact"},{"name":"upregulation of bacterial flagellum assembly","type":"exact"},{"name":"upregulation of bacterial-type flagellum assembly","type":"exact"}],"termid":"GO:1902210"}


id: FYPO:0005532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H4 acetylation during vegetative growth","termid":"FYPO:0002364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H4-K16 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H4-K16 acetylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H4K16 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005532"}


id: GO:1900816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ochratoxin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"ochratoxin A metabolic process","synonyms":[{"name":"Ochratoxin A metabolism","type":"exact"}],"termid":"GO:1900816"}


id: GO:0160050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to xanthine, a purine base.","definition_xrefs":["PMID:32345632","PMID:34125892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase binding","termid":"GO:0002060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"xanthine binding","termid":"GO:0160050"}


id: GO:0071474
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92160],"is_not":false,"summary":null,"term":"GO:0071474"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular HOG response","type":"exact"},{"name":"cellular hypertonic response","type":"exact"},{"name":"cellular response to hypertonicity","type":"exact"}],"termid":"GO:0071474","terms_by_termid":{"GO:0071474":null}}


id: PR:O74173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 1-beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04800","PANTHER:PTHR11595:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.04","secondary_identifiers":["UniProtKB:O74173"],"synonyms":[{"name":"EF-1-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF1B2","type":"exact"}],"termid":"PR:O74173"}


id: GO:0019773
data:
  {"annotated_genes":["SJAG_02562","SJAG_00808","SJAG_04306","SJAG_02502","SJAG_04357","SJAG_00778","SJAG_05316"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69425,71614,72194,72635,74823,75097,78141],"is_not":false,"summary":null,"term":"GO:0019773"}]},"cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.","definition_xrefs":["GOC:jl","PMID:10854779","GOC:mtg_sensu","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"proteasome core complex","termid":"GO:0005839"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00778":null,"SJAG_00808":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome core complex, alpha-subunit complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0019773","terms_by_termid":{"GO:0019773":null}}


id: PBO:0055063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2479","termid":"PBO:0055063"}


id: GO:0015176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall of bacteria, where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some catalyze export of nucleases.","definition_xrefs":["TC:1.A.38.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete holin (obsolete GO:0015176)","synonyms":[{"name":"holin","type":"exact"}],"termid":"GO:0015176"}


id: FYPO:0002075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in the population are viable at a high temperature in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population at high temperature (obsolete FYPO:0002075)","termid":"FYPO:0002075"}


id: GO:0140225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has DNA topoisomerase type I and RNA topoisomerase activities.","definition_xrefs":["GOC:lnp","PMID:23912945","PMID:28176834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA topoisomerase III-beta-TDRD3 complex","synonyms":[{"name":"Top3-beta-TDRD3 complex","type":"exact"}],"termid":"GO:0140225"}


id: MONDO:0013829
data:
  {"annotated_genes":["SJAG_04540"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86044],"is_not":false,"summary":null,"term":"MONDO:0013829"}]},"cv_name":"mondo","definition":"Any UV-sensitive syndrome in which the cause of the disease is a mutation in the ERCC8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UV-sensitive syndrome","termid":"MONDO:0015797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"UV-sensitive syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614621","MEDGEN:766212","GARD:15827","NCIT:C173110","UMLS:C3553298"],"synonyms":[{"name":"ERCC8 UV-sensitive syndrome","type":"exact"},{"name":"UV-sensitive syndrome 2","type":"exact"},{"name":"UV-sensitive syndrome caused by mutation in ERCC8","type":"exact"},{"name":"UV-sensitive syndrome type 2","type":"exact"},{"name":"UVSS2","type":"related"}],"termid":"MONDO:0013829","terms_by_termid":{"MONDO:0013829":null},"xrefs":{"Monarch":{"xref_id":"0013829"}}}


id: PBO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snoR02 (predicted)","termid":"PBO:0001648"}


id: MONDO:0032830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snijders blok-fisher syndrome","secondary_identifiers":["OMIM:618604","MEDGEN:1684801","UMLS:C5231424","Orphanet:656135"],"synonyms":[{"name":"SNIBFIS","type":"related"},{"name":"SNIJDERS BLOK-FISHER SYNDROME","type":"related"}],"termid":"MONDO:0032830","xrefs":{"Monarch":{"xref_id":"0032830"}}}


id: GO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-3 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-3 receptor activity","secondary_identifiers":["Wikipedia:Interleukin-3_receptor"],"synonyms":[{"name":"IL-3 receptor activity","type":"exact"},{"name":"IL-3R","type":"exact"}],"termid":"GO:0004912"}


id: GO:1905444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"negatively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of clathrin coat assembly","synonyms":[{"name":"down regulation of clathrin cage assembly","type":"exact"},{"name":"down regulation of clathrin coat assembly","type":"exact"},{"name":"down-regulation of clathrin cage assembly","type":"exact"},{"name":"down-regulation of clathrin coat assembly","type":"exact"},{"name":"downregulation of clathrin cage assembly","type":"exact"},{"name":"downregulation of clathrin coat assembly","type":"exact"},{"name":"inhibition of clathrin cage assembly","type":"narrow"},{"name":"inhibition of clathrin coat assembly","type":"narrow"},{"name":"negative regulation of clathrin cage assembly","type":"exact"}],"termid":"GO:1905444"}


id: FYPO:0005942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of intergenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intergenic meiotic recombination reflects crossovers between homologous chromosomes.","definition_xrefs":["PomBase:mah","PMID:19752195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intergenic meiotic recombination frequency","synonyms":[{"name":"normal meiotic intergenic recombination frequency","type":"exact"}],"termid":"FYPO:0005942"}


id: PBO:0065705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 3","termid":"PBO:0065705"}


id: PBO:0116861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor G, Gfm1/Mef1","termid":"PBO:0116861"}


id: PR:P50520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol 3-kinase catalytic subunit type 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10048:SF7","OMA:SCHPO01959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase vps34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.05","secondary_identifiers":["UniProtKB:P50520"],"synonyms":[{"name":"PI3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIK3C3","type":"exact"},{"name":"vacuolar protein sorting-associated protein 34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50520"}


id: PBO:0038375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_negatively_regulated_by","termid":"PBO:0038375"}


id: MONDO:0021292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the body of stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric body carcinoma","termid":"MONDO:0003972"},{"relation_name":"is_a","term_name":"stomach carcinoma in situ","termid":"MONDO:0004716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of gastric body","secondary_identifiers":["MEDGEN:87516","NCIT:C4430","UMLS:C0345805","SCTID:92549006"],"synonyms":[{"name":"body of stomach carcinoma in situ","type":"exact"},{"name":"body of stomach in situ carcinoma","type":"exact"},{"name":"carcinoma in situ of body of stomach","type":"exact"},{"name":"carcinoma in situ of the body of the stomach","type":"exact"},{"name":"carcinoma in situ of the gastric body","type":"exact"},{"name":"gastric body carcinoma in situ","type":"exact"},{"name":"gastric body carcinoma in situ aJCC v6 and v7","type":"exact"},{"name":"stage 0 body of stomach carcinoma","type":"exact"},{"name":"stage 0 gastric body carcinoma","type":"exact"}],"termid":"MONDO:0021292","xrefs":{"Monarch":{"xref_id":"0021292"}}}


id: PR:Q9Y7N4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-amino-acid oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino-acid oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.07c","secondary_identifiers":["UniProtKB:Q9Y7N4"],"synonyms":[{"name":"DAAO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAMOX (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DAO","type":"exact"}],"termid":"PR:Q9Y7N4"}


id: PBO:0078549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM39-RPP21 readthrough","termid":"PBO:0078549"}


id: FYPO:0006340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis occurs only at the old end of the cell during interphase of the mitotic cell cycle. Normally, endocytosis takes place at the old cell end throughout interphase, and also at the new end after NETO.","definition_xrefs":["PomBase:mah","PMID:16141239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"endocytosis restricted to old cell end","synonyms":[{"name":"endocytosis abolished at new cell end","type":"exact"},{"name":"endocytosis restricted to old cell end during interphase of mitotic cell cycle","type":"exact"},{"name":"endocytosis restricted to old cell end during mitotic interphase","type":"exact"},{"name":"endocytosis restricted to old cell end during vegetative growth","type":"exact"},{"name":"endocytosis restricted to old cell tip","type":"exact"}],"termid":"FYPO:0006340"}


id: SO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The paternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally_imprinted","synonyms":[{"name":"paternally imprinted","type":"exact"}],"termid":"SO:0000136"}


id: SO:0000833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_region","synonyms":[{"name":"transcript region","type":"exact"}],"termid":"SO:0000833"}


id: MONDO:0000563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"GRID2-related autosomal dominant spinocerebellar ataxia","secondary_identifiers":["DOID:0050988"],"synonyms":[{"name":"GRID2-related spinocerebellar ataxia","type":"related"}],"termid":"MONDO:0000563","xrefs":{"Monarch":{"xref_id":"0000563"}}}


id: MONDO:0021895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common disorder noted with jaw movement. It may be caused by malocclusion, repetitive use injury, trauma or arthritis. It is more prevalent among females between their second and fourth decades. Clinical signs include preauricular pain, temporomandibular joint clicking (as the mandibular condyle slips from the articulation made with the capsular disk and temporal bone) and restriction of jaw motion. Clinical course is typically benign but may progress to associated headaches, ear and neck pain, tinnitus and dislocation of temporomandibular joint. Prognosis is favorable as a majority of cases will respond to conservative management.","definition_xrefs":["NCIT:C35066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"temporomandibular joint disorder","termid":"MONDO:0005473"},{"relation_name":"is_a","term_name":"myofascial pain syndrome","termid":"MONDO:0006862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"temporomandibular joint dysfunction syndrome","secondary_identifiers":["UMLS:C0039496","MESH:D013706","MEDGEN:21093"],"synonyms":[{"name":"Costen Syndrome","type":"related"},{"name":"Costen's Syndrome","type":"related"},{"name":"Costen's complex","type":"related"},{"name":"Costen's syndrome","type":"related"},{"name":"Costens Syndrome","type":"related"},{"name":"Joint Syndrome, Temporomandibular","type":"related"},{"name":"Mandibular dysfunction","type":"related"},{"name":"Myofascial Pain Dysfunction Syndrome, Temporomandibular Joint","type":"related"},{"name":"Myofascial pain - dysfunction syndrome of TMJ","type":"related"},{"name":"Snapping jaw","type":"related"},{"name":"Syndrome, Costen's","type":"related"},{"name":"Syndrome, TMJ","type":"related"},{"name":"Syndrome, Temporomandibular Joint","type":"related"},{"name":"TMJ Syndrome","type":"related"},{"name":"TMJ syndrome","type":"related"},{"name":"TMJPDS - Temporomandibular joint pain dysfunction syndrome","type":"related"},{"name":"Temporomandibular Joint Dysfunction Syndrome","type":"related"},{"name":"Temporomandibular Joint Syndrome","type":"related"},{"name":"Temporomandibular joint pain dysfunction syndrome","type":"related"},{"name":"Temporomandibular joint syndrome","type":"related"},{"name":"Temporomandibular joint-pain-dysfunction syndrome","type":"related"},{"name":"temporomandibular joint dysfunction syndrome","type":"exact"}],"termid":"MONDO:0021895","xrefs":{"Monarch":{"xref_id":"0021895"}}}


id: GO:0003808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of blood coagulation factors Va and VIIIa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete protein C (activated) activity (obsolete GO:0003808)","synonyms":[{"name":"GSAPC","type":"related"},{"name":"activated blood coagulation factor XIV activity","type":"related"},{"name":"activated protein C","type":"related"},{"name":"autoprothrombin II-A","type":"related"},{"name":"autoprothrombin IIA activity","type":"related"},{"name":"blood-coagulation factor XIVa","type":"related"},{"name":"protein C (activated) activity","type":"exact"},{"name":"protein Ca","type":"related"}],"termid":"GO:0003808"}


id: PBO:0061887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid binding protein/cell adhesion molecule like","termid":"PBO:0061887"}


id: PR:P40921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.02c gene.","definition_xrefs":["UniProtKB:P40921","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.02c","synonyms":[{"name":"EF-1-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC29A4.02c","type":"exact"},{"name":"eEF-1B gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40921"}


id: GO:0008792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H+ = agmatine + CO2.","definition_xrefs":["EC:4.1.1.19","RHEA:17641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"arginine decarboxylase activity","secondary_identifiers":["Reactome:R-HSA-350598","MetaCyc:ARGDECARBOX-RXN","KEGG_REACTION:R00566"],"synonyms":[{"name":"L-arginine carboxy-lyase (agmatine-forming)","type":"related"},{"name":"L-arginine carboxy-lyase activity","type":"related"},{"name":"SpeA","type":"related"}],"termid":"GO:0008792"}


id: GO:0051788
data:
  {"annotated_genes":["SJAG_02419","SJAG_00270","SJAG_02341","SJAG_00219","SJAG_00054","SJAG_04187","SJAG_04567","SJAG_01737","SJAG_00173","SJAG_03815","SJAG_05022","SJAG_01556","SJAG_04612","SJAG_03345","SJAG_03657","SJAG_00552","SJAG_01160"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87821,112086,70618,103996,109803,109804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[107803,109544,110131,109440,113425],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[89007,112786,87540,103197],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[110651,76184],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a misfolded protein stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00552":null,"SJAG_01160":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_04187":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to misfolded protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051788","terms_by_termid":{"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: PBO:0110045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM5 pseudogene 1","termid":"PBO:0110045"}


id: PBO:0109192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin, meiosis specific","termid":"PBO:0109192"}


id: GO:0047271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycosaminoglycan + UDP-galactose = D-galactosylglycosaminoglycan + UDP.","definition_xrefs":["MetaCyc:2.4.1.74-RXN","EC:2.4.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"glycosaminoglycan galactosyltransferase activity","synonyms":[{"name":"UDP-galactose:glycosaminoglycan D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:glycosaminoglycan D-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-mucopolysaccharide galactosyltransferase activity","type":"related"}],"termid":"GO:0047271"}


id: GO:0010239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps involved in processing precursor RNAs arising from transcription of operons in the chloroplast genome into mature mRNAs.","definition_xrefs":["PMID:9648738","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"},{"relation_name":"is_a","term_name":"chloroplast RNA processing","termid":"GO:0031425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chloroplast mRNA processing","termid":"GO:0010239"}


id: MOD:00814
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-xylosylserine.","definition_xrefs":["RESID:AA0406","PubMed:8747463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-xylosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(alpha-D-xylopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Xyl) serine","type":"exact"},{"name":"O-(beta-D-xylopyranosyl)-L-serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-xylosyl-L-serine","type":"exact"},{"name":"O3-xylosylserine","type":"exact"},{"name":"OXylSer","type":"exact"}],"termid":"MOD:00814"}


id: PBO:0030790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_volume_spheroid_vegetative_cell","termid":"PBO:0030790"}


id: PBO:0068770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 7","termid":"PBO:0068770"}


id: MONDO:1011671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysraphism, non-human animal","secondary_identifiers":["OMIA:000938"],"termid":"MONDO:1011671","xrefs":{"Monarch":{"xref_id":"1011671"}}}


id: FYPO:0006547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of phosphatidylserine (PS) in the plasma membrane is abnormal such that the PS level is lower than normal at one or both cell tips. Normally, PS shows a polarized distribution with a higher concentration at the cell tips than in the lateral plasma membrane.","definition_xrefs":["PMID:27852900","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane phosphatidylserine distribution","termid":"FYPO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal plasma membrane phosphatidylserine distribution resulting in decreased concentration at cell tip","synonyms":[{"name":"abnormal plasma membrane PS distribution resulting in decreased concentration at cell tip","type":"exact"},{"name":"abnormal plasma membrane phosphatidylserine distribution resulting in decreased concentration at cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane phosphatidylserine distribution resulting in decreased concentration at cell tip during vegetative growth","type":"exact"},{"name":"abnormal plasma membrane phosphatidylserine distribution resulting in reduced concentration at cell tip","type":"exact"},{"name":"decreased plasma membrane phosphatidylserine polarity","type":"related"},{"name":"reduced plasma membrane phosphatidylserine polarity","type":"related"}],"termid":"FYPO:0006547"}


id: PBO:0075073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 123","termid":"PBO:0075073"}


id: GO:0035409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of a phosphate group to a tyrosine residue at position 41 of the histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-Y41 phosphorylation (obsolete GO:0035409)","termid":"GO:0035409"}


id: PBO:0088282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar endopolyphosphatase","termid":"PBO:0088282"}


id: PBO:0050814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis B virus integration site 8","termid":"PBO:0050814"}


id: GO:0043028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["Wikipedia:Caspase","GOC:mtg_apoptosis","PMID:14744432","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","synonyms":[{"name":"caspase regulator activity","type":"broad"}],"termid":"GO:0043028"}


id: GO:0010189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin E metabolic process","termid":"GO:0042360"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin E biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1422"],"synonyms":[{"name":"alpha-tocopherol biosynthesis","type":"narrow"},{"name":"alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"tocopherol biosynthesis","type":"exact"},{"name":"tocopherol biosynthetic process","type":"exact"},{"name":"vitamin E anabolism","type":"exact"},{"name":"vitamin E biosynthesis","type":"exact"},{"name":"vitamin E formation","type":"exact"},{"name":"vitamin E synthesis","type":"exact"}],"termid":"GO:0010189"}


id: GO:1900235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Kit signaling pathway.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of Kit signaling pathway","termid":"GO:1900234"},{"relation_name":"negatively_regulates","term_name":"Kit signaling pathway","termid":"GO:0038109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Kit signaling pathway","synonyms":[{"name":"down regulation of Kit signaling pathway","type":"exact"},{"name":"down regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"down regulation of stem cell factor signaling pathway","type":"exact"},{"name":"down-regulation of Kit signaling pathway","type":"exact"},{"name":"down-regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of stem cell factor signaling pathway","type":"exact"},{"name":"downregulation of Kit signaling pathway","type":"exact"},{"name":"downregulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"downregulation of stem cell factor signaling pathway","type":"exact"},{"name":"inhibition of Kit signaling pathway","type":"narrow"},{"name":"inhibition of stem cell factor receptor signaling pathway","type":"exact"},{"name":"inhibition of stem cell factor signaling pathway","type":"exact"},{"name":"negative regulation of Kit signalling pathway","type":"exact"},{"name":"negative regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"negative regulation of stem cell factor signaling pathway","type":"exact"}],"termid":"GO:1900235"}


id: PBO:0075331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SON pseudogene 1","termid":"PBO:0075331"}


id: PR:P36623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.06","secondary_identifiers":["UniProtKB:P36623"],"synonyms":[{"name":"BPG-dependent PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MPGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphoglyceromutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC26F1.06","type":"related"},{"name":"Spom972h-gpmA","type":"exact"}],"termid":"PR:P36623"}


id: GO:0097283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a keratinocyte. A keratinocyte is an epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin.","definition_xrefs":["GOC:jc","PMID:10201527","GOC:mtg_apoptosis","CL:0000312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinocyte apoptotic process","synonyms":[{"name":"keratinocyte apoptosis","type":"narrow"}],"termid":"GO:0097283"}


id: GO:0030977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to taurine.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate binding","termid":"GO:0043210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"taurine binding","termid":"GO:0030977"}


id: MONDO:0850281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A salivary gland carcinoma that has material basis in a chromosomal translocation that results in an ETV6-NTRK3 fusion gene.","definition_xrefs":["DOID:0080808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"mammary analog secretory carcinoma","secondary_identifiers":["MEDGEN:875770","UMLS:C4042906"],"termid":"MONDO:0850281","xrefs":{"Monarch":{"xref_id":"0850281"}}}


id: GO:0006642
data:
  {"annotated_genes":["SJAG_02089","SJAG_02487","SJAG_02683","SJAG_02907"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89864,91652,93433,114599],"is_not":false,"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The release of triglycerides, any triester of glycerol, from storage within cells or tissues, making them available for metabolism.","definition_xrefs":["PMID:15713625","GOC:mah","PMID:11943743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02089":null,"SJAG_02487":null,"SJAG_02683":null,"SJAG_02907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triglyceride mobilization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"triacylglycerol mobilization","type":"exact"}],"termid":"GO:0006642","terms_by_termid":{"GO:0006642":null}}


id: PBO:0067240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 311, pseudogene","termid":"PBO:0067240"}


id: PBO:0045720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4 pseudogene 1","termid":"PBO:0045720"}


id: MONDO:0022832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart disease radio ulnar synostosis intellectual disability","termid":"MONDO:0022832","xrefs":{"Monarch":{"xref_id":"0022832"}}}


id: PBO:0057274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mir-497-195 cluster host gene","termid":"PBO:0057274"}


id: MONDO:0007922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphedema - distichiasis is a rare syndromic lymphedema disorder characterized by lower-limb lymphedema and varying degrees of abnormal growth of eyelashes from the orifices of the Meibomian glands (distichiasis), with occasional associated manifestations.","definition_xrefs":["Orphanet:33001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes distichiasis (obsolete MONDO:0020190)","termid":"MONDO:0020190"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema-distichiasis syndrome","secondary_identifiers":["GARD:333","ICD10CM:Q82.0","NCIT:C128191","ICD9:743.63","MEDGEN:75566","NORD:1383","UMLS:C0265345","DOID:0111509","MESH:C537710","OMIM:153400","SCTID:8634009"],"synonyms":[{"name":"hereditary lymphedema-distichiasis syndrome (subtype)","type":"related"},{"name":"lymphedema with distichiasis","type":"related"},{"name":"lymphedema-distichiasis syndrome","type":"exact"},{"name":"lymphedema-distichiasis syndrome with renal disease and diabetes mellitus","type":"related"}],"termid":"MONDO:0007922","xrefs":{"Monarch":{"xref_id":"0007922"}}}


id: GO:0102451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferide + S-adenosyl-L-methionine = 3,4'-O-dimethylkaempferol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"kaempferide 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13937"],"termid":"GO:0102451"}


id: PBO:0052918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-1","termid":"PBO:0052918"}


id: PBO:0087838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third-largest subunit of DNA polymerase II (DNA polymerase epsilon); required to maintain fidelity of chromosomal replication and also for inheritance of telomeric silencing; stabilizes the interaction of Pol epsilon with primer-template DNA, positively affecting the processivity of the polymerase and exonuclease activities of Pol epsilon; mRNA abundance peaks at the G1/S boundary of the cell cycle; DPB3 has a paralog, DLS1, that arose from the whole genome duplication","termid":"PBO:0087838"}


id: FYPO:0000063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA recombination is abnormal. DNA recombination is a process that results in reassortment of genes, producing gene combinations different from those that were present in the parents.","definition_xrefs":["PomBase:mah","GO:0006310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"abnormal DNA recombination","synonyms":[{"name":"abnormal recombination","type":"exact"},{"name":"recombination defects","type":"exact"}],"termid":"FYPO:0000063"}


id: PR:Q10486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17C9.15c gene.","definition_xrefs":["UniProtKB:Q10486","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.15c","synonyms":[{"name":"Spom972h-SPAC17C9.15c","type":"exact"}],"termid":"PR:Q10486"}


id: GO:0010863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate of phospholipase C activity.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phospholipase C activity (obsolete GO:0010863)","termid":"GO:0010863"}


id: MONDO:0017474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrodactyly of fingers","secondary_identifiers":["Orphanet:295044","MEDGEN:107892","icd11.foundation:1647254435","GARD:8529","SCTID:297195000","UMLS:C0574044","HP:0100746","MESH:C537720"],"synonyms":[{"name":"Megalodactyly of the hand","type":"related"},{"name":"macrodactyly of hand","type":"exact"},{"name":"macrodactyly of the hand","type":"related"},{"name":"megalodactylism of the hand","type":"related"}],"termid":"MONDO:0017474","xrefs":{"Monarch":{"xref_id":"0017474"}}}


id: GO:0032417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of sodium:proton antiporter activity","synonyms":[{"name":"activation of sodium:hydrogen antiporter activity","type":"narrow"},{"name":"positive regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"stimulation of sodium:hydrogen antiporter activity","type":"narrow"},{"name":"up regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"up-regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"upregulation of sodium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0032417"}


id: MONDO:0012176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Emanuel syndrome is a constitutional genomic disorder due to the presence of a supernumerary derivative 22 chromosome and characterized by severe intellectual disability, characteristic facial dysmorphism (micrognathia, hooded eyelids, upslanting downslanting parebral fissures, deep set eyes, low hanging columnella and long philtrum), congenital heart defects and kidney abnormalities.","definition_xrefs":["Orphanet:96170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Emanuel syndrome","secondary_identifiers":["MESH:C535733","SCTID:702417004","UMLS:C1836929","MEDGEN:323030","OMIM:609029","GARD:9835","ICD9:758.5","NANDO:1200689"],"synonyms":[{"name":"Der(22)t(11;22) syndrome","type":"exact"},{"name":"Ehlers-Danlos syndrome, classic-like, 1","type":"related"},{"name":"Emanuel syndrome","type":"exact"},{"name":"supernumerary Der(22)T(11","type":"related"},{"name":"supernumerary der(22) syndrome","type":"exact"},{"name":"supernumerary der(22),t(11;22) syndrome","type":"related"}],"termid":"MONDO:0012176","xrefs":{"Monarch":{"xref_id":"0012176"}}}


id: FYPO:0001372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex of a spore is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex","termid":"FYPO:0001373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to medial cortex in spores","synonyms":[{"name":"abnormal protein localisation to medial cortex in spores","type":"exact"},{"name":"abnormal protein localization to medial ring in spores","type":"exact"}],"termid":"FYPO:0001372"}


id: PBO:0069939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1232, pseudogene","termid":"PBO:0069939"}


id: GO:0045309
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72173,77819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated amino acid residue within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein binding","termid":"GO:0051219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein phosphorylated amino acid binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoprotein amino acid binding","type":"related"}],"termid":"GO:0045309","terms_by_termid":{"GO:1990269":null}}


id: PR:Q9C1W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12388:SF0","OMA:SCHPO02627","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.10","secondary_identifiers":["UniProtKB:Q9C1W5"],"synonyms":[{"name":"Spom972h-PAM16","type":"exact"},{"name":"presequence translocated-associated motor subunit pam16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C1W5"}


id: PBO:0005411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-C (predicted)","termid":"PBO:0005411"}


id: PBO:0055269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2696","termid":"PBO:0055269"}


id: MONDO:0010495
data:
  {"annotated_genes":["SJAG_03112"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85062],"is_not":false,"summary":null,"term":"MONDO:0010495"}]},"cv_name":"mondo","definition":"Any nonphotosensitive trichothiodystrophy in which the cause of the disease is a mutation in the RNF113A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03112":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 5, nonphotosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:899675","DOID:0111868","GARD:15277","OMIM:300953","UMLS:C4225420"],"synonyms":[{"name":"RNF113A nonphotosensitive trichothiodystrophy","type":"exact"},{"name":"TTD5","type":"related"},{"name":"nonphotosensitive trichothiodystrophy caused by mutation in RNF113A","type":"exact"},{"name":"trichothiodystrophy 5, nonphotosensitive","type":"exact"}],"termid":"MONDO:0010495","terms_by_termid":{"MONDO:0010495":null},"xrefs":{"Monarch":{"xref_id":"0010495"}}}


id: PBO:0017528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5, Tif5(predicted)","termid":"PBO:0017528"}


id: GO:1904685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metalloendopeptidase activity.","definition_xrefs":["GOC:BHF_miRNA","PMID:18591254","GOC:BHF","GO_REF:0000059","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of metalloendopeptidase activity","termid":"GO:1904683"},{"relation_name":"is_a","term_name":"positive regulation of metallopeptidase activity","termid":"GO:1905050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metalloendopeptidase activity","synonyms":[{"name":"activation of metalloendopeptidase activity","type":"narrow"},{"name":"activation of metalloendoprotease activity","type":"narrow"},{"name":"activation of metalloendoproteinase activity","type":"narrow"},{"name":"positive regulation of metalloendoprotease activity","type":"narrow"},{"name":"positive regulation of metalloendoproteinase activity","type":"narrow"},{"name":"up regulation of metalloendopeptidase activity","type":"exact"},{"name":"up regulation of metalloendoprotease activity","type":"narrow"},{"name":"up regulation of metalloendoproteinase activity","type":"narrow"},{"name":"up-regulation of metalloendopeptidase activity","type":"exact"},{"name":"up-regulation of metalloendoprotease activity","type":"narrow"},{"name":"up-regulation of metalloendoproteinase activity","type":"narrow"},{"name":"upregulation of metalloendopeptidase activity","type":"exact"},{"name":"upregulation of metalloendoprotease activity","type":"narrow"},{"name":"upregulation of metalloendoproteinase activity","type":"narrow"}],"termid":"GO:1904685"}


id: GO:0038001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of information from one cell to another, where the signal travels from the signal-producing cell to the receiving cell by passive diffusion or bulk flow in intercellular fluid. The signaling cell and the receiving cell are usually in the vicinity of each other.","definition_xrefs":["GOC:mtg_signaling_feb11","ISBN:3527303782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"paracrine signaling","synonyms":[{"name":"paracrine signalling","type":"exact"}],"termid":"GO:0038001"}


id: PBO:0067714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 12","termid":"PBO:0067714"}


id: FYPO:0006127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oligomerization is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein oligomerization","termid":"FYPO:0005220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein oligomerization","synonyms":[{"name":"increased protein oligomerization during mitotic cell cycle","type":"related"},{"name":"increased protein oligomerization during vegetative growth","type":"exact"}],"termid":"FYPO:0006127"}


id: MONDO:0100065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tyrosine hydroxylase deficiency with onset typically between age three and 12 months. Motor milestones are overtly delayed in this severe form. Affected infants demonstrate truncal hypotonia and parkinsonian symptoms and signs (hypokinesia, rigidity of extremities, and/or tremor).","definition_xrefs":["PMID:20301610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine hydroxylase deficiency","termid":"MONDO:0100064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"TH-deficient infantile parkinsonism and motor delay","synonyms":[{"name":"tyrosine hydroxylase infantile parkinsonism and motor delay","type":"exact"}],"termid":"MONDO:0100065","xrefs":{"Monarch":{"xref_id":"0100065"}}}


id: GO:1901681
data:
  {"annotated_genes":["SJAG_01458","SJAG_03755","SJAG_00706","SJAG_04842","SJAG_02464","SJAG_01269","SJAG_03362","SJAG_05181","SJAG_02734","SJAG_03743","SJAG_03985","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99062,70100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043295"},{"annotations":[75608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"},{"annotations":[97626,57144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904047"},{"annotations":[66800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"},{"annotations":[64215,72866,58665,58374,57396,61486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to a sulfur compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_01269":null,"SJAG_01351":null,"SJAG_01458":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_03362":null,"SJAG_03743":null,"SJAG_03755":null,"SJAG_03985":null,"SJAG_04842":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"sulfur compound binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"sulfur molecular entity binding","type":"exact"}],"termid":"GO:1901681","terms_by_termid":{"GO:0030975":null,"GO:0030976":null,"GO:0036042":null,"GO:0043295":null,"GO:1904047":null}}


id: PBO:0038585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acyltransferase 2","termid":"PBO:0038585"}


id: GO:0030795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a jasmonate = S-adenosyl-L-homocysteine + a methyljasmonate.","definition_xrefs":["RHEA:13349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"methyl jasmonate methylesterase activity","secondary_identifiers":["GO:0045546","EC:2.1.1.141","GO:0102078","MetaCyc:RXN-10768"],"synonyms":[{"name":"S-adenosyl-L-methionine:jasmonate O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase activity","type":"exact"},{"name":"jasmonic acid carboxyl methyltransferase activity","type":"related"}],"termid":"GO:0030795"}


id: MONDO:0019009
data:
  {"annotated_genes":["SJAG_00991","SJAG_05346","SJAG_03067","SJAG_02723","SJAG_00289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86366,86364,86363,86367,86365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011818"}]},"cv_name":"mondo","definition":"Isolated focal cortical dysplasia is a rare, genetic, non-syndromic cerebral malformation due to abnormal neuronal migration disorder characterized by variable-sized, focalized malformations located in any part(s) of the cerebral cortex, which manifests with drug-resistant epilepsy (usually leading to intellectual disability) and behavioral disturbances. Abnormal MRI findings (e.g. abnormal white and/or gray matter signal, blurred gray-white matter junction, localized volume loss, cortical thickening, abnormal gyral pattern, abnormal hippocampus) and variable histopathologic patterns are associated.","definition_xrefs":["Orphanet:65683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortical dysplasia","termid":"MONDO:0017094"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16671","NANDO:1200564","MEDGEN:1645432","SCTID:766710005","UMLS:C4707795"],"synonyms":[{"name":"epilepsy due to FCD","type":"exact"}],"termid":"MONDO:0019009","terms_by_termid":{"MONDO:0011818":null},"xrefs":{"Monarch":{"xref_id":"0019009"}}}


id: GO:0051789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete response to protein (obsolete GO:0051789)","synonyms":[{"name":"response to protein","type":"exact"},{"name":"response to protein stimulus","type":"exact"}],"termid":"GO:0051789"}


id: GO:1900084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-tyrosine autophosphorylation.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"},{"relation_name":"regulates","term_name":"peptidyl-tyrosine autophosphorylation","termid":"GO:0038083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"regulation of tyrosine autophosphorylation","type":"exact"}],"termid":"GO:1900084"}


id: GO:0006359
data:
  {"annotated_genes":["SJAG_03931","SJAG_00142","SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75666,77868],"is_not":false,"summary":null,"term":"GO:0006359"},{"annotations":[73464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription mediated by RNA ploymerase III.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02898":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"regulation of transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of transcription from Pol III promoter","type":"exact"},{"name":"regulation of transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006359","terms_by_termid":{"GO:0006359":null,"GO:0016480":null}}


id: PBO:0063741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 6","termid":"PBO:0063741"}


id: FYPO:0005613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nuclear envelope is normal (i.e. indistinguishable from wild type) when the cell undergoes transition from G0 phase to G1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nuclear envelope","termid":"FYPO:0005612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nuclear envelope during G0 to G1 transition","synonyms":[{"name":"normal protein localisation to nuclear envelope during G0 to G1 transition","type":"exact"},{"name":"normal protein localization after G0 to G1 transition","type":"exact"},{"name":"normal protein localization during cell cycle re-entry","type":"exact"},{"name":"normal protein localization during cell quiescence to G1 transition","type":"exact"},{"name":"normal protein localization during exit from cell quiescence","type":"exact"},{"name":"normal protein localization during quiescence to G1 transition","type":"exact"},{"name":"normal protein localization during recovery from quiescence","type":"exact"},{"name":"normal protein relocalization to nuclear envelope during G0 to G1 transition","type":"narrow"}],"termid":"FYPO:0005613"}


id: PBO:0053413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 351","termid":"PBO:0053413"}


id: MONDO:1011255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-progressive vision impairment in dim or absent lighting in horses due to a variation in the TRPM1 gene. Specifically, horses homozygous for a white spotting phenotype, known as leopard complex spotting, are affected by CSNB.","definition_xrefs":["PMID:24167615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"congenital blindness, non-human animal","termid":"MONDO:1011975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital stationary night blindness, TRPM1-related, horse","secondary_identifiers":["OMIA:001341-9796"],"termid":"MONDO:1011255","xrefs":{"Monarch":{"xref_id":"1011255"}}}


id: PBO:0042085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 152","termid":"PBO:0042085"}


id: PR:O13825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An immediate early response 3-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01030","PANTHER:PTHR15858:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.09","secondary_identifiers":["UniProtKB:O13825"],"synonyms":[{"name":"Spom972h-IER3IP1","type":"exact"}],"termid":"PR:O13825"}


id: PR:Q9UTQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1093.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTQ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.04c","synonyms":[{"name":"CCA-adding enzyme 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1093.04c","type":"exact"},{"name":"tRNA CCA-pyrophosphorylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA adenylyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA nucleotidyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTQ0"}


id: MONDO:1011778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic active hepatitis, non-human animal","secondary_identifiers":["OMIA:001093"],"termid":"MONDO:1011778","xrefs":{"Monarch":{"xref_id":"1011778"}}}


id: PBO:0060337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 2","termid":"PBO:0060337"}


id: PBO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 5","termid":"PBO:0050970"}


id: FYPO:0003630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which U2-type prespliceosome assembly is abolished. The U2-type prespliceosome is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP, and also contains other proteins.","definition_xrefs":["GO:1903241","GO:0071004","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abolished U2-type prespliceosome assembly","synonyms":[{"name":"U2-type prespliceosome assembly abolished","type":"exact"},{"name":"abolished U2-type prespliceosome assembly during mitotic cell cycle","type":"related"},{"name":"abolished U2-type prespliceosome assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0003630"}


id: GO:0032504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biological process in which new individuals are produced by one or two multicellular organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.","definition_xrefs":["GOC:jid","GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular organism reproduction (obsolete GO:0032504)","termid":"GO:0032504"}


id: MONDO:0011086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic T-B- severe combined immunodeficiency disorder due to null mutations in recombination activating gene (RAG) 1 and/or RAG2 resulting in less than 1% of wild type V(D)J recombination activity. Patients present with neonatal onset of life-threatening, severe, recurrent infections by opportunistic fungal, viral and bacterial micro-organisms, as well as skin rashes, chronic diarrhea, failure to thrive and fever. Immunologic observations include profound T- and B-cell lymphopenia, normal NK counts and low or absent serum immunoglobulins; some patients may have eosinophilia.","definition_xrefs":["Orphanet:331206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive","secondary_identifiers":["MEDGEN:321935","OMIM:601457","UMLS:C1832322","DOID:0090013","GARD:10339","MESH:C563311"],"synonyms":[{"name":"SCID due to complete RAG1-2 deficiency","type":"exact"},{"name":"SCID due to complete RAG1/2 deficiency","type":"exact"},{"name":"SCID, AR, T-cell negative, B-cell negative, NK cell-positive","type":"related"},{"name":"SCID, T cell-negative, B cell-negative, NK cell-positive","type":"related"},{"name":"severe combined immunodeficiency due to complete RAG1-2 deficiency","type":"exact"},{"name":"severe combined immunodeficiency due to complete RAG1/2 deficiency","type":"related"},{"name":"severe combined immunodeficiency, B cell-negative","type":"exact"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive","type":"exact"},{"name":"severe immunodeficiency, autosomal recessive, T-cell negative, B-cell negative, NK cell-positive","type":"related"}],"termid":"MONDO:0011086","xrefs":{"Monarch":{"xref_id":"0011086"}}}


id: PBO:0064577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POT1 antisense RNA 1","termid":"PBO:0064577"}


id: MONDO:0021512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the thymus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"immune system organ benign neoplasm","termid":"MONDO:0000630"},{"relation_name":"is_a","term_name":"thymus neoplasm","termid":"MONDO:0005197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"benign neoplasm of thymus","secondary_identifiers":["MEDGEN:87526","UMLS:C0345975","SCTID:92437008","ICD9:212.6","icd11.foundation:1583331018","NCIT:C4458","ICD10CM:D15.0"],"synonyms":[{"name":"benign Thymus neoplasm","type":"exact"},{"name":"benign Thymus tumor","type":"exact"},{"name":"benign Thymus tumour","type":"exact"},{"name":"benign neoplasm of the Thymus","type":"exact"},{"name":"benign thymic neoplasm","type":"exact"},{"name":"benign thymic tumor","type":"exact"},{"name":"benign thymic tumour","type":"exact"},{"name":"benign tumor of Thymus","type":"exact"},{"name":"benign tumor of the Thymus","type":"exact"},{"name":"benign tumour of Thymus","type":"exact"},{"name":"benign tumour of the Thymus","type":"exact"},{"name":"thymus benign neoplasm","type":"exact"}],"termid":"MONDO:0021512","xrefs":{"Monarch":{"xref_id":"0021512"}}}


id: GO:0060173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin.","definition_xrefs":["GOC:dph","PMID:11487378","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb development","secondary_identifiers":["Wikipedia:Limb_development"],"synonyms":[{"name":"limb bud development","type":"narrow"},{"name":"paired limb/fin development","type":"exact"}],"termid":"GO:0060173"}


id: PATO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of temperature which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant temperature","termid":"PATO:0001314"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of temperature","synonyms":[{"name":"low variability of temperature","type":"exact"}],"termid":"PATO:0001307"}


id: PBO:0084089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF); involved in vesicle-mediated vacuolar transport, including Golgi-endosome trafficking and sorting through the multivesicular body (MVB); specifically stimulates the intrinsic guanine nucleotide exchange activity of Rab family members (Vps21p/Ypt52p/Ypt53p); partially redundant with GEF VPS9; required for localization of the CORVET complex to endosomes; contains a VPS9 domain","termid":"PBO:0084089"}


id: PBO:0091913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf9","termid":"PBO:0091913"}


id: MONDO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A degenerative spinal disease that can involve any part of the vertebra, the intervertebral disk, and the surrounding soft tissue.","definition_xrefs":["MESH:D055009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease of bone structure","termid":"MONDO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylosis","secondary_identifiers":["UMLS:C0038019","SCTID:48210000","ICD9:721.3","DOID:2247","MEDGEN:21295","ICD10CM:M47","SCTID:8847002","ICD9:721.9"],"synonyms":[{"name":"lumbar spondylosis with myelopathy","type":"exact"},{"name":"lumbosacral spondylosis without myelopathy","type":"exact"},{"name":"spondylogenic compression of lumbar spinal cord","type":"exact"},{"name":"spondylogenic compression of thoracic spinal cord","type":"exact"},{"name":"spondylosis with myelopathy","type":"exact"},{"name":"thoracic or lumbar spondylosis with myelopathy","type":"exact"}],"termid":"MONDO:0002253","xrefs":{"Monarch":{"xref_id":"0002253"}}}


id: MOD:00450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this isotopic label from Unimod entry 57 is deprecated","definition_xrefs":["PubMed:11857757"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00450 acetate labeling reagent light form (K) (obsolete MOD:00450)","termid":"MOD:00450"}


id: GO:0070721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that consists of a Stat1-Stat2 heterodimer and the IRF9 protein.","definition_xrefs":["PMID:8943351","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"ISGF3 complex","synonyms":[{"name":"interferon-stimulated gene factor 3 transcription complex","type":"exact"}],"termid":"GO:0070721"}


id: MONDO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the skin. It is characterized by the presence of epithelioid endothelial cells.","definition_xrefs":["NCIT:C7393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"epithelioid hemangioma","termid":"MONDO:0021169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin epithelioid hemangioma","secondary_identifiers":["SCTID:400131007","DOID:14308","MEDGEN:297","MESH:D000796","UMLS:C0002989"],"synonyms":[{"name":"angiolymphoid cutaneous hyperplasia","type":"exact"},{"name":"angiolymphoid hyperplasia of skin","type":"exact"},{"name":"angiolymphoid hyperplasia of the skin","type":"exact"},{"name":"epithelioid hemangioma of skin","type":"exact"},{"name":"epithelioid hemangioma of the skin","type":"exact"},{"name":"histiocytoid hemangioma of skin","type":"exact"},{"name":"histiocytoid hemangioma of the skin","type":"exact"},{"name":"histiocytoid hemangioma of zone of skin","type":"exact"},{"name":"skin epithelioid hemangioma","type":"exact"},{"name":"zone of skin histiocytoid hemangioma","type":"exact"}],"termid":"MONDO:0001939","xrefs":{"Monarch":{"xref_id":"0001939"}}}


id: PBO:0003472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, ribosome associated molecular chaperone Sks2","termid":"PBO:0003472"}


id: GO:0033153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["GOC:add","ISBN:0781700221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of T cell receptor gene segments","termid":"GO:0002681"},{"relation_name":"is_a","term_name":"V(D)J recombination","termid":"GO:0033151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"T cell receptor V(D)J recombination","synonyms":[{"name":"T cell receptor V(D)J joining","type":"exact"},{"name":"T cell receptor V-D-J joining","type":"narrow"},{"name":"T cell receptor V-D-J recombination","type":"narrow"},{"name":"T cell receptor V-J joining","type":"narrow"},{"name":"T cell receptor V-J recombination","type":"narrow"},{"name":"T-cell receptor V(D)J recombination","type":"exact"},{"name":"TCR V(D)J recombination","type":"exact"}],"termid":"GO:0033153"}


id: PBO:0047816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 antisense RNA 2","termid":"PBO:0047816"}


id: PBO:0068656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 37, pseudogene","termid":"PBO:0068656"}


id: FYPO:0001788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cytoplasm","synonyms":[{"name":"normal protein localisation to cytoplasm","type":"exact"},{"name":"normal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0001788"}


id: MONDO:0017744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of O-xylosyl/N-acetylgalactosaminylglycan synthesis (obsolete MONDO:0017744)","secondary_identifiers":["Orphanet:309463"],"termid":"MONDO:0017744","xrefs":{"Monarch":{"xref_id":"0017744"}}}


id: FYPO:0001085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered polysaccharide level during vegetative growth","synonyms":[{"name":"abnormal polysaccharide level during vegetative growth","type":"exact"},{"name":"altered cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"altered polysaccharide level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001085"}


id: PBO:0071908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 47","termid":"PBO:0071908"}


id: PBO:0067297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 382, pseudogene","termid":"PBO:0067297"}


id: MONDO:0001476
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"An abnormality in which a part of a structure in one or both eyes is missing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D003103","NCIT:C98877","UMLS:C0009363","MEDGEN:1046","DOID:12270","Orphanet:194","ICD9:743.49","SCTID:93390002"],"synonyms":[{"name":"coloboma of eye","type":"exact"},{"name":"coloboma of macula","type":"narrow"},{"name":"coloboma of the eye","type":"exact"},{"name":"congenital ocular coloboma","type":"narrow"},{"name":"ocular coloboma","type":"exact"}],"termid":"MONDO:0001476","terms_by_termid":{"MONDO:0013783":null},"xrefs":{"Monarch":{"xref_id":"0001476"}}}


id: PBO:0072918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class F member 1","termid":"PBO:0072918"}


id: MONDO:0005715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toxoplasma infection that is present from birth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"toxoplasmosis","termid":"MONDO:0005989"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital toxoplasmosis","secondary_identifiers":["UMLS:C0040560","ICD10CM:P37.1","MESH:D014125","GARD:18708","NANDO:2200892","DOID:13336","EFO:0007220","icd11.foundation:1194018225","MedDRA:10010652","MEDGEN:52799","NCIT:C50503","ICD9:771.2","Orphanet:858","SCTID:73893000"],"synonyms":[{"name":"Toxoplasma embryofetopathy","type":"exact"},{"name":"Toxoplasma embryopathy","type":"exact"},{"name":"congenital toxoplasmosis","type":"exact"},{"name":"mother-to-child transmission of toxoplasmosis","type":"exact"},{"name":"toxoplasmosis - congen.","type":"exact"},{"name":"toxoplasmosis, congenital","type":"exact"}],"termid":"MONDO:0005715","xrefs":{"Monarch":{"xref_id":"0005715"}}}


id: PBO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein (predicted)","termid":"PBO:0002538"}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["EC:3.5.1.40","RHEA:15065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["KEGG_REACTION:R01425","MetaCyc:ACYLAGMATINE-AMIDASE-RXN"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: GO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of citric acid, 2-hydroxy-1,2,3-propanetricarboxylic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate transport","termid":"GO:0015746"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"citric acid secretion","synonyms":[{"name":"citrate secretion","type":"exact"}],"termid":"GO:0046720"}


id: RO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x immediate transformation of y iff x immediately succeeds y temporally at a time boundary t, and all of the matter present in x at t is present in y at t, and all the matter in y at t is present in x at t","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_develops_from","termid":"RO:0002207"},{"relation_name":"is_a","term_name":"transformation_of","termid":"RO:0002494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediate_transformation_of","termid":"RO:0002495"}


id: FYPO:0002089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which exocytosis is abnormal. Exocytosis is the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. A phenotype may affect exocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah","GO:0006887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal exocytosis","termid":"FYPO:0007873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal exocytosis during vegetative growth","synonyms":[{"name":"abnormal exocytosis during mitotic cell cycle","type":"related"},{"name":"exocytosis defects during vegetative growth","type":"exact"}],"termid":"FYPO:0002089"}


id: GO:1903911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor clustering.","definition_xrefs":["PMID:23575248","GOC:als","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor clustering","synonyms":[{"name":"activation of receptor clustering","type":"narrow"},{"name":"up regulation of receptor clustering","type":"exact"},{"name":"up-regulation of receptor clustering","type":"exact"},{"name":"upregulation of receptor clustering","type":"exact"}],"termid":"GO:1903911"}


id: MONDO:0019923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Beckwith-Wiedemann syndrome","termid":"MONDO:0007534"},{"relation_name":"is_a","term_name":"chromosome 11 disorder","termid":"MONDO:0700018"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome due to paternal uniparental disomy of chromosome 11","secondary_identifiers":["MEDGEN:1843183","Orphanet:96193","GARD:19342","UMLS:C5680249"],"synonyms":[{"name":"Beckwith-Wiedemann syndrome due to paternal uniparental disomy of chromosome type 11","type":"exact"},{"name":"Mosaic paternal uniparental disomy of chromosome 11","type":"exact"},{"name":"UPD(11)pat","type":"exact"}],"termid":"MONDO:0019923","xrefs":{"Monarch":{"xref_id":"0019923"}}}


id: MONDO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive loss of tooth tissue by chemical processes that do not involve bacterial action. (Jablonski, Dictionary of Dentistry, 1992, p296)","definition_xrefs":["MESH:D014077-modified"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth erosion, non-bacterial","secondary_identifiers":["DOID:2498","SCTID:82212003","MESH:D014077","ICD9:521.3","ICD9:521.30","ICD9:521.35","ICD9:521.34","UMLS:C0040436","MEDGEN:21584"],"synonyms":[{"name":"generalised erosion","type":"related"},{"name":"generalized erosion","type":"related"},{"name":"localised erosion","type":"related"},{"name":"localized erosion","type":"related"},{"name":"tooth erosion","type":"exact"}],"termid":"MONDO:0002325","xrefs":{"Monarch":{"xref_id":"0002325"}}}


id: PR:Q9HDU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A galactose-1-phosphate uridylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11943:SF0","OMA:SCHPO04141","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-1-phosphate uridylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.10c","secondary_identifiers":["UniProtKB:Q9HDU5"],"synonyms":[{"name":"Spom972h-GALT","type":"exact"},{"name":"UDP-glucose--hexose-1-phosphate uridylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gal-1-P uridylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU5"}


id: MONDO:0032855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and distal skeletal anomalies","secondary_identifiers":["OMIM:618659","MEDGEN:1684792","GARD:18521","UMLS:C5231448"],"synonyms":[{"name":"NEDDFSA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND DISTAL SKELETAL ANOMALIES","type":"related"}],"termid":"MONDO:0032855","xrefs":{"Monarch":{"xref_id":"0032855"}}}


id: PBO:0039306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 1, histone H2A dioxygenase","termid":"PBO:0039306"}


id: PBO:0091224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane/prospore membrane sodium ion/proton antiporter Nhe1/Sod2","termid":"PBO:0091224"}


id: GO:0090731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very-low-density lipoprotein particle stimulus.","definition_xrefs":["GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipoprotein particle","termid":"GO:0055094"},{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to very-low-density lipoprotein particle stimulus","synonyms":[{"name":"cellular response to VLDL particle stimulus","type":"exact"}],"termid":"GO:0090731"}


id: MONDO:0020043
data:
  {"annotated_genes":["SJAG_01945","SJAG_05212","SJAG_04641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[84920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[84775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_04641":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive congenital cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681519","GARD:19412","MEDGEN:1843070","Orphanet:98095"],"termid":"MONDO:0020043","terms_by_termid":{"MONDO:0008943":null,"MONDO:0014104":null,"MONDO:0014503":null},"xrefs":{"Monarch":{"xref_id":"0020043"}}}


id: MONDO:0013505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the DPY19L2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"male infertility due to globozoospermia","termid":"MONDO:0015746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 9","secondary_identifiers":["UMLS:C3151407","GARD:15735","DOID:0111156","MEDGEN:462757","OMIM:613958","DOID:0070175"],"synonyms":[{"name":"DPY19L2 azoospermia","type":"exact"},{"name":"SPGF9","type":"related"},{"name":"azoospermia caused by mutation in DPY19L2","type":"exact"},{"name":"globozoospermia, complete","type":"related"},{"name":"globozoospermia, total","type":"related"},{"name":"spermatogenic failure 9","type":"exact"},{"name":"spermatogenic failure type 9","type":"exact"}],"termid":"MONDO:0013505","xrefs":{"Monarch":{"xref_id":"0013505"}}}


id: PR:Q9P4W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01423","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.09c","secondary_identifiers":["UniProtKB:Q9P4W7"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC5","type":"exact"}],"termid":"PR:Q9P4W7"}


id: GO:0102351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-aminobutyric acid + 2-oxo monocarboxylic acid anion = 4-oxobutanoate + glycine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-aminobutyrate transaminase (glyoxylate dependent) activity (obsolete GO:0102351)","termid":"GO:0102351"}


id: PBO:0052949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 1","termid":"PBO:0052949"}


id: FYPO:0006928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which one or both nuclear membrane(s) form blebs. Membrane blebbing usually leads to decreases in nuclear size and the nucleus:cytoplasm volume ratio.","definition_xrefs":["PomBase:mah","PMID:31015410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"nuclear membrane blebbing","synonyms":[{"name":"nuclear envelope blebbing","type":"related"},{"name":"nuclear membrane blebbing during mitotic cell cycle","type":"related"},{"name":"nuclear membrane blebbing during vegetative growth","type":"exact"}],"termid":"FYPO:0006928"}


id: SO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed resulting in a codon that encodes for a different but similar amino acid. These variants may or may not be deleterious.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"missense_variant","termid":"SO:0001583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_missense_variant","synonyms":[{"name":"conservative missense codon","type":"exact"},{"name":"conservative missense variant","type":"exact"},{"name":"neutral missense codon","type":"related"},{"name":"quiet missense codon","type":"related"}],"termid":"SO:0001585"}


id: PBO:0065818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4B-EGLN2 readthrough (NMD candidate)","termid":"PBO:0065818"}


id: MONDO:0020272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete connective tissue disease with eye involvement (obsolete MONDO:0020272)","termid":"MONDO:0020272","xrefs":{"Monarch":{"xref_id":"0020272"}}}


id: MONDO:0016029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm of the sinonasal cavity, arising from the basal layers of olfactory neuroepithelial cells in the superior nasal vault, which usually occurs in the 5th to 6th decades of life and is characterized clinically by non-specific symptoms such as progressive ipsilateral nasal block, sinusitis, facial pain, intermittent headaches, hyposmia/dysosmia, rhinorrhea and epistaxis as well as proptosis, diplopia and excessive lacrimation due to orbital extension. With early treatment and in the absence of distant metastases, ENB appears to have a good prognosis (compared to other superior nasal malignancies), despite a high rate of cervical metastases.","definition_xrefs":["Orphanet:1957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"esthesioneuroblastoma","secondary_identifiers":["GARD:2197","SCTID:422886007","UMLS:C0206717","MEDGEN:60217"],"synonyms":[{"name":"olfactory neuroblastoma","type":"related"}],"termid":"MONDO:0016029","xrefs":{"Monarch":{"xref_id":"0016029"}}}


id: GO:0018406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of a peptidyl-tryptophan residue by the transfer of alpha-mannopyranose from dolichyl-activated mannose to the indole ring.","definition_xrefs":["PMID:9450955","PMID:7947762","RESID:AA0217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-linked glycosylation via tryptophan","termid":"GO:0018317"},{"relation_name":"is_a","term_name":"protein mannosylation","termid":"GO:0035268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan","secondary_identifiers":["GO:0032004"],"synonyms":[{"name":"protein amino acid C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan","type":"exact"},{"name":"protein amino acid C-linked mannosylation","type":"exact"}],"termid":"GO:0018406"}


id: MONDO:0019435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of juvenile idiopathic arthritis defined by the presence of arthritis affecting five or more separate joints during the first six months of disease, with positive serologic testing for rheumatoid factor.","definition_xrefs":["NCIT:C119034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyarticular juvenile idiopathic arthritis","termid":"MONDO:0018456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid factor-positive polyarticular juvenile idiopathic arthritis","secondary_identifiers":["GARD:19064","MEDGEN:855737","NANDO:2201058","Orphanet:85435","UMLS:C3890733","EFO:0009731"],"synonyms":[{"name":"juvenile idiopathic rheumatoid factor-positive polyarthritis","type":"exact"},{"name":"polyarthritis with rheumatoid factor","type":"exact"},{"name":"polyarticular JIA, RF+","type":"exact"},{"name":"polyarticular juvenile idiopathic arthritis, RF+","type":"exact"},{"name":"polyarticular juvenile idiopathic arthritis, rheumatoid Factor Positive","type":"exact"},{"name":"rheumatoid factor-positive polyarticular JIA","type":"exact"}],"termid":"MONDO:0019435","xrefs":{"Monarch":{"xref_id":"0019435"}}}


id: MONDO:0007984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome is characterized by metaphyseal dysplasia associated with short stature and facial dysmorphism (a beaked nose, short philtrum, thin lips, maxillary hypoplasia, dystrophic yellowish teeth) and acral anomalies (short fifth metacarpals and/or short middle phalanges of fingers two and five). It has been described in several members spanning four generations of a French-Canadian family. The syndrome is likely to be transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:2504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome","secondary_identifiers":["DOID:0111513","UMLS:C3549874","GARD:3568","OMIM:156510","MEDGEN:762788"],"synonyms":[{"name":"MDMHB","type":"related"},{"name":"metaphyseal dysplasia maxillary hypoplasia brachydactyly","type":"related"},{"name":"metaphyseal dysplasia with maxillary hypoplasia with or without brachydactyly","type":"related"}],"termid":"MONDO:0007984","xrefs":{"Monarch":{"xref_id":"0007984"}}}


id: PBO:0057856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3167","termid":"PBO:0057856"}


id: GO:0051356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events during equilibrioception required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual input plays an important role in the ability of an organism to perceive its orientation with respect to gravity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual perception","termid":"GO:0007601"},{"relation_name":"part_of","term_name":"equilibrioception","termid":"GO:0050957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visual perception involved in equilibrioception","synonyms":[{"name":"equilibrioception by visual perception","type":"narrow"},{"name":"perception of orientation with respect to gravity by visual perception","type":"exact"},{"name":"visual perception during equilibrioception","type":"related"}],"termid":"GO:0051356"}


id: FYPO:0008013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:35536002","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal inositol hexakisphosphate kinase activity","termid":"FYPO:0008013"}


id: PBO:0048592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone 1","termid":"PBO:0048592"}


id: GO:0047739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cephalosporin C + H2O = acetate + deacetylcephalosporin C + H+.","definition_xrefs":["RHEA:22596","EC:3.1.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0019213","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"cephalosporin-C deacetylase activity","secondary_identifiers":["KEGG_REACTION:R03062","MetaCyc:CEPHALOSPORIN-C-DEACETYLASE-RXN"],"synonyms":[{"name":"cephalosporin C acetyl-esterase activity","type":"related"},{"name":"cephalosporin C acetyl-hydrolase activity","type":"related"},{"name":"cephalosporin C acetylase activity","type":"related"},{"name":"cephalosporin C acetylesterase activity","type":"related"},{"name":"cephalosporin C deacetylase activity","type":"related"},{"name":"cephalosporin acetylesterase activity","type":"related"},{"name":"cephalosporin-C acetylhydrolase activity","type":"related"}],"termid":"GO:0047739"}


id: GO:0008868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactitol-1-phosphate + NAD+ = D-tagatose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactitol-1-phosphate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.251-RXN","RHEA:15137"],"synonyms":[{"name":"galactitol-1-phosphate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008868"}


id: PBO:0090272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane siderophore-iron transmembrane transporter Str2","termid":"PBO:0090272"}


id: GO:0019589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol into propane-1,3-diol and water.","definition_xrefs":["MetaCyc:GOLPDLCAT-PWY","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glycerol catabolic process","termid":"GO:0019588"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"anaerobic glycerol catabolic process to propane-1,3-diol","synonyms":[{"name":"glycerol fermentation to 1,3-propanediol","type":"exact"},{"name":"glycerol fermentation to propane-1,3-diol","type":"exact"}],"termid":"GO:0019589"}


id: PBO:0046723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 2A","termid":"PBO:0046723"}


id: GO:0009411
data:
  {"annotated_genes":["SJAG_04877","SJAG_03898","SJAG_04190","SJAG_02182","SJAG_01648","SJAG_02818","SJAG_05197","SJAG_01010","SJAG_02200","SJAG_02199","SJAG_04150","SJAG_00863","SJAG_00208","SJAG_00729","SJAG_02828","SJAG_00814","SJAG_00272","SJAG_02334","SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76678,102614,108909,94995],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[112631,87758,95779,96897,65413,68349,67214,66074,64458,75433,59958,93423,69772,105743,104018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"response to UV light stimulus","type":"exact"},{"name":"response to UV radiation stimulus","type":"exact"},{"name":"response to ultraviolet light stimulus","type":"exact"},{"name":"response to ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0009411","terms_by_termid":{"GO:0070914":null,"GO:1904161":null}}


id: PBO:0043898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 2","termid":"PBO:0043898"}


id: PBO:0060207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUS81 structure-specific endonuclease subunit","termid":"PBO:0060207"}


id: GO:0018127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + L-serine = nicotinamide + N2-(ADP-D-ribosyl)-L-serine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)-serine ADP-ribosyltransferase activity (obsolete GO:0018127)","termid":"GO:0018127"}


id: PBO:0054392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1788","termid":"PBO:0054392"}


id: PBO:0089381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate transmembrane transporter","termid":"PBO:0089381"}


id: GO:0046180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketogluconate metabolic process","termid":"GO:0019522"},{"relation_name":"is_a","term_name":"aldonic acid biosynthetic process","termid":"GO:0046175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"ketogluconate biosynthetic process","synonyms":[{"name":"ketogluconate anabolism","type":"exact"},{"name":"ketogluconate biosynthesis","type":"exact"},{"name":"ketogluconate formation","type":"exact"},{"name":"ketogluconate synthesis","type":"exact"}],"termid":"GO:0046180"}


id: PBO:0048744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 6","termid":"PBO:0048744"}


id: MONDO:0011676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PHACE is an acronym used to describe a syndrome characterized by the association of posterior fossa brain malformations, large facial haemangiomas, anatomical anomalies of the cerebral arteries, aortic coarctation and other cardiac anomalies, and eye abnormalities. Sternal anomalies are also sometimes present, and in these cases the syndrome is referred to as PHACES. Two additional manifestations have recently been added to the clinical spectrum of PHACE syndrome: stenosis of the vessels at the base of the skull and segmental longitudinal dilations of the internal carotid artery.","definition_xrefs":["Orphanet:42775"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neurovascular malformation (obsolete MONDO:0015145)","termid":"MONDO:0015145"},{"relation_name":"excluded_subClassOf","term_name":"obsolete vascular tumor with associated anomalies (obsolete MONDO:0018718)","termid":"MONDO:0018718"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic vascular tumor (obsolete MONDO:0018729)","termid":"MONDO:0018729"},{"relation_name":"excluded_subClassOf","term_name":"obsolete Moyamoya syndrome (obsolete MONDO:0018792)","termid":"MONDO:0018792"},{"relation_name":"excluded_subClassOf","term_name":"obsolete palpebral tumor with a vascular malformation (obsolete MONDO:0020182)","termid":"MONDO:0020182"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022","MONDO:0005267"],"is_obsolete":false,"name":"PHACE syndrome","secondary_identifiers":["icd11.foundation:1825849023","UMLS:C1847874","MEDGEN:376231","NORD:1927","MedDRA:10068032","OMIM:606519","GARD:8338"],"synonyms":[{"name":"P-CIIS","type":"related"},{"name":"PHACE association","type":"related"},{"name":"Phaces association","type":"related"},{"name":"Posterior fossa brain malformations, hemangiomas of the face, arterial anomalies, cardiac anomalies, and eye abnormalities","type":"related"},{"name":"aortic aneurysm, giant congenital","type":"related"},{"name":"pascual-Castroviejo syndrome type 2","type":"exact"},{"name":"pascual-Castroviejo type II syndrome","type":"related"}],"termid":"MONDO:0011676","xrefs":{"Monarch":{"xref_id":"0011676"}}}


id: MONDO:0013096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 7","secondary_identifiers":["UMLS:C2751638","MEDGEN:416602","OMIM:613032"],"synonyms":[{"name":"GLM7","type":"exact"},{"name":"glioma susceptibility 7","type":"exact"}],"termid":"MONDO:0013096","xrefs":{"Monarch":{"xref_id":"0013096"}}}


id: MONDO:0020016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare neurologic disease with psychiatric involvement (obsolete MONDO:0020016)","secondary_identifiers":["Orphanet:98033"],"termid":"MONDO:0020016","xrefs":{"Monarch":{"xref_id":"0020016"}}}


id: MONDO:0013369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TNNI3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 7","secondary_identifiers":["UMLS:C1860752","MEDGEN:348695","OMIM:613690","DOID:0110313"],"synonyms":[{"name":"CMH7","type":"exact"},{"name":"TNNI3 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic 7","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 7","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 7","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 7","type":"exact"},{"name":"hypertrophic cardiomyopathy 7","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TNNI3","type":"exact"},{"name":"hypertrophic cardiomyopathy type 7","type":"exact"}],"termid":"MONDO:0013369","xrefs":{"Monarch":{"xref_id":"0013369"}}}


id: PR:O59836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsk1-interacting molecule 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.13","synonyms":[{"name":"DNA repair protein rad35 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dfp1","type":"exact"}],"termid":"PR:O59836"}


id: PBO:0039847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 15","termid":"PBO:0039847"}


id: PBO:0030205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030205"}


id: PBO:0038950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated pyruvate carboxylase interacting lncRNA","termid":"PBO:0038950"}


id: GO:0030409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formimidoyltetrahydrofolate + L-glutamate = tetrahydrofolate + N-formimidoyl-L-glutamate.","definition_xrefs":["RHEA:15097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"glutamate formimidoyltransferase activity","secondary_identifiers":["GO:0030407","MetaCyc:GLUTAMATE-FORMIMINOTRANSFERASE-RXN","EC:2.1.2.5"],"synonyms":[{"name":"5-formimidoyltetrahydrofolate:L-glutamate N-formimidoyltransferase activity","type":"related"},{"name":"formimidoyltransferase activity","type":"broad"},{"name":"formiminoglutamic acid transferase activity","type":"related"},{"name":"formiminoglutamic formiminotransferase activity","type":"related"},{"name":"formiminotransferase activity","type":"broad"},{"name":"glutamate formiminotransferase activity","type":"exact"},{"name":"glutamate formyltransferase activity","type":"related"}],"termid":"GO:0030409"}


id: PBO:0064030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 64","termid":"PBO:0064030"}


id: PBO:0027862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_replication_during_cellular_response_to_DNA_damage","termid":"PBO:0027862"}


id: MONDO:0009485
data:
  {"annotated_genes":["SJAG_04429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84821],"is_not":false,"summary":null,"term":"MONDO:0009485"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04429":null},"genotype_count":0,"is_obsolete":false,"name":"oculocerebrofacial syndrome, Kaufman type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537013","OMIM:244450","GARD:3084","MEDGEN:343403","SCTID:722056009","UMLS:C1855663","DOID:0111456","Orphanet:2707"],"synonyms":[{"name":"BPIDS","type":"exact"},{"name":"KOS","type":"related"},{"name":"Kaufman oculocerebrofacial syndrome","type":"related"},{"name":"blepharophimosis-ptosis-intellectual disability syndrome","type":"exact"},{"name":"kos","type":"related"},{"name":"oculocerebrofacial syndrome, Kaufman type","type":"exact"},{"name":"severe intellectual disability, microcephaly, long narrow face, ocular anomalies, and long thin hands and feet","type":"related"},{"name":"severe mental retardation, microcephaly, long narrow face, ocular anomalies, and long thin hands and feet","type":"related"}],"termid":"MONDO:0009485","terms_by_termid":{"MONDO:0009485":null},"xrefs":{"Monarch":{"xref_id":"0009485"}}}


id: PBO:0060384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin transcription factor 1 like","termid":"PBO:0060384"}


id: PBO:0038357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_removed","termid":"PBO:0038357"}


id: MONDO:0016735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I, indolent and relatively circumscribed brain tumor. Morphologically it is characterized by the presence of astrocytes that line vascular and hyalinized pseudopapillae. In between the pseudopapillae aggregates of neurocytes, large neurons, and ganglioid cells are present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary glioneuronal tumor","secondary_identifiers":["ONCOTREE:PGNT","Orphanet:251962","UMLS:C2985174","NCIT:C92554","DOID:0081283","ICDO:9509/1","MEDGEN:457400","GARD:20730"],"synonyms":[{"name":"PGNT","type":"exact"},{"name":"papillary glioneuronal tumor (WHO grade I)","type":"exact"},{"name":"papillary glioneuronal tumour (WHO grade I)","type":"exact"},{"name":"pseudopapillary ganglioglioneurocytoma","type":"exact"},{"name":"pseudopapillary neurocytoma with glial differentiation","type":"exact"}],"termid":"MONDO:0016735","xrefs":{"Monarch":{"xref_id":"0016735"}}}


id: GO:0097191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with either a ligand binding to a cell surface receptor, or a ligand being withdrawn from a cell surface receptor (e.g. in the case of signaling by dependence receptors), and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf","PMID:17340152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-5357769"],"synonyms":[{"name":"death receptor-mediated apoptosis","type":"narrow"},{"name":"extrinsic apoptosis","type":"narrow"},{"name":"extrinsic apoptotic pathway","type":"exact"},{"name":"extrinsic apoptotic signaling pathway in presence of ligand","type":"narrow"},{"name":"extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:0097191"}


id: GO:0002534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of a cytokine following a inflammatory stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"},{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytokine production involved in inflammatory response","synonyms":[{"name":"cytokine production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002534"}


id: PBO:0049189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate and hydroxypyruvate reductase","termid":"PBO:0049189"}


id: GO:1900656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of diorcinol biosynthetic process","termid":"GO:1900655"},{"relation_name":"negatively_regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of diorcinol biosynthetic process","synonyms":[{"name":"down regulation of diorcinol anabolism","type":"exact"},{"name":"down regulation of diorcinol biosynthesis","type":"exact"},{"name":"down regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down regulation of diorcinol formation","type":"exact"},{"name":"down regulation of diorcinol synthesis","type":"exact"},{"name":"down-regulation of diorcinol anabolism","type":"exact"},{"name":"down-regulation of diorcinol biosynthesis","type":"exact"},{"name":"down-regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down-regulation of diorcinol formation","type":"exact"},{"name":"down-regulation of diorcinol synthesis","type":"exact"},{"name":"downregulation of diorcinol anabolism","type":"exact"},{"name":"downregulation of diorcinol biosynthesis","type":"exact"},{"name":"downregulation of diorcinol biosynthetic process","type":"exact"},{"name":"downregulation of diorcinol formation","type":"exact"},{"name":"downregulation of diorcinol synthesis","type":"exact"},{"name":"inhibition of diorcinol anabolism","type":"exact"},{"name":"inhibition of diorcinol biosynthesis","type":"exact"},{"name":"inhibition of diorcinol biosynthetic process","type":"narrow"},{"name":"inhibition of diorcinol formation","type":"exact"},{"name":"inhibition of diorcinol synthesis","type":"exact"},{"name":"negative regulation of diorcinol anabolism","type":"exact"},{"name":"negative regulation of diorcinol biosynthesis","type":"exact"},{"name":"negative regulation of diorcinol formation","type":"exact"},{"name":"negative regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900656"}


id: PBO:0081670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 593","termid":"PBO:0081670"}


id: PR:Q9HGL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Ts, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11741:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Ts, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.07c","secondary_identifiers":["UniProtKB:Q9HGL5"],"synonyms":[{"name":"EF-Ts (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"EF-TsMt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC800.07c","type":"related"},{"name":"Spom972h-TSFM","type":"exact"}],"termid":"PR:Q9HGL5"}


id: SO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is not divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Frameshift"],"termid":"SO:0000865"}


id: MONDO:0009174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological conditions in the intestines that are characterized by the gastrointestinal loss of serum proteins, including serum albumin; immunoglobulins; and at times lymphocytes. Severe condition can result in hypogammaglobulinemia or lymphopenia. Protein-losing enteropathies are associated with a number of diseases including intestinal lymphangiectasis; whipple'S disease; and neoplasms of the small intestine.","definition_xrefs":["MESH:D011504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"protein-losing enteropathy","secondary_identifiers":["GARD:15003","SCTID:22542007","DOID:10611","MEDGEN:19522","Orphanet:566175","UMLS:C0033680","ICD9:579.8","HP:0002243","OMIM:226300","icd11.foundation:1821383469"],"synonyms":[{"name":"CHAPLE","type":"related"},{"name":"complement hyperactivation, ANGIOPATHIC thrombosis, and PROTEIN-losing enteropathy","type":"related"},{"name":"complement hyperactivation, Angiopathic thrombosis, and Protein-losing enteropathy","type":"related"},{"name":"enteropathy, PROTEIN-losing","type":"related"},{"name":"enteropathy, exudative","type":"exact"},{"name":"exudative enteropathy","type":"exact"},{"name":"protein-losing enteropathy","type":"exact"},{"name":"protein-losing enteropathy (disease)","type":"exact"}],"termid":"MONDO:0009174","xrefs":{"Monarch":{"xref_id":"0009174"}}}


id: FYPO:0006006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has two nuclei but no septum, and the mitotic cell cycle is arrested in telophase. The post-anaphase microtubule array is present.","definition_xrefs":["PomBase:mah","PMID:12791993"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell cycle arrest in mitotic telophase","termid":"FYPO:0000622"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic telophase","termid":"FYPO:0000622"},{"relation_name":"is_a","term_name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation","termid":"FYPO:0005689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"inviable binucleate aseptate cell with cell cycle arrest in mitotic telophase","synonyms":[{"name":"inviable binucleate aseptate cell with arrest in telophase of mitotic cell cycle","type":"related"},{"name":"inviable binucleate aseptate cell with cell cycle arrest in mitotic telophase during vegetative growth","type":"exact"},{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest in telophase","type":"exact"},{"name":"lethal; binucleate aseptate cell with cell cycle arrest in mitotic telophase","type":"exact"},{"name":"mitotic cell cycle arrest in telophase with inviable binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0006006"}


id: MONDO:0022602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly small stature face anomalies","termid":"MONDO:0022602","xrefs":{"Monarch":{"xref_id":"0022602"}}}


id: PBO:0071653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 17","termid":"PBO:0071653"}


id: MONDO:0008355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis, infantile hypertrophic, 1","secondary_identifiers":["OMIM:179010","UMLS:C1867403","MEDGEN:357978"],"synonyms":[{"name":"IHPS1","type":"exact"},{"name":"pyloric stenosis, infantile","type":"related"},{"name":"pyloric stenosis, infantile hypertrophic","type":"related"},{"name":"pyloric stenosis, infantile hypertrophic 1, multifactorial","type":"exact"},{"name":"pyloric stenosis, infantile hypertrophic, 1","type":"exact"}],"termid":"MONDO:0008355","xrefs":{"Monarch":{"xref_id":"0008355"}}}


id: PBO:0075876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL3 antisense RNA 1","termid":"PBO:0075876"}


id: SO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary at which a restriction enzyme breaks the nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_cleavage_site","termid":"SO:0002204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_cleavage_junction","synonyms":[{"name":"restriction enzyme cleavage junction","type":"exact"}],"termid":"SO:0001688"}


id: GO:0005710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during metaphase. Typically, sister chromatids are held together at their centromeres and chromosomes are covered with a large number of molecules, including ribonucleoproteins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete metaphase chromosome (obsolete GO:0005710)","synonyms":[{"name":"metaphase chromosome","type":"exact"}],"termid":"GO:0005710"}


id: PBO:0116698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB1 antisense RNA 1","termid":"PBO:0116698"}


id: GO:0006127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transferring reducing equivalents from NADH in the cytosol into the mitochondria via glycerol-3-phosphate. Cytosolic glycerol-3-phosphate dehydrogenase uses NADH to convert dihydroxyacetone phosphate (DHAP) to glycerol-3-phosphate (G3P) in the cytosol; G3P then diffuses into the mitochondria where mitochondrial glycerol-3-phosphate dehydrogenase uses FAD to convert G3P back to DHAP; the electrons on the reduced FADH2 are then available for use in the electron transport chain, and DHAP returns to the cytosol to complete the cycle.","definition_xrefs":["GOC:sjm","PMID:16368075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH oxidation","termid":"GO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"glycerol-3-phosphate shuttle","secondary_identifiers":["MetaCyc:PWY-6118"],"synonyms":[{"name":"glycerol phosphate shuttle","type":"exact"},{"name":"glycerophosphate shuttle","type":"exact"}],"termid":"GO:0006127"}


id: GO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell gliding that results from the actions of cell surface adhesin proteins that are propelled by membrane motor proteins.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell gliding","termid":"GO:0071976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell surface adhesin-mediated gliding motility","termid":"GO:0071980"}


id: MONDO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute myeloid leukemia and myelodysplastic syndromes related to radiation represent a subgroup of therapy-related myeloid neoplasms (t-MN), associated with treatment of an unrelated neoplastic disease with radiation. The neoplastic cells typically harbor unbalanced aberrations of chromosomes 5 and 7 (monosomy 5/del(5q) and monosomy 7/del(7q)) or a complex karyotype. Patients frequently present with multilineage dysplasia and cytopenias 5-10 years after exposure.","definition_xrefs":["Orphanet:164726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"therapy related acute myeloid leukemia and myelodysplastic syndrome","termid":"MONDO:0019457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia and myelodysplastic syndromes related to radiation","secondary_identifiers":["UMLS:C4707660","GARD:20057","MEDGEN:1637827"],"synonyms":[{"name":"AML and myelodysplastic syndromes related to radiation","type":"exact"}],"termid":"MONDO:0015608","xrefs":{"Monarch":{"xref_id":"0015608"}}}


id: GO:0008781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + N-acylneuraminate = diphosphate + CMP-N-acylneuraminate.","definition_xrefs":["EC:2.7.7.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"N-acylneuraminate cytidylyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9990","Reactome:R-HSA-4084982","RHEA:11344"],"synonyms":[{"name":"CMP-N-acetylneuraminate synthase activity","type":"related"},{"name":"CMP-N-acetylneuraminate synthetase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid synthase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid synthetase activity","type":"related"},{"name":"CMP-NANA synthetase activity","type":"related"},{"name":"CMP-Neu5Ac synthetase activity","type":"related"},{"name":"CMP-NeuAc synthetase activity","type":"related"},{"name":"CMP-NeuNAc synthetase activity","type":"related"},{"name":"CMP-sialate diphosphorylase activity","type":"related"},{"name":"CMP-sialate pyrophosphorylase activity","type":"related"},{"name":"CMP-sialate synthase activity","type":"related"},{"name":"CMP-sialate synthetase activity","type":"related"},{"name":"CMP-sialic acid synthetase activity","type":"related"},{"name":"CMP-sialic synthetase activity","type":"related"},{"name":"CTP:N-acylneuraminate cytidylyltransferase activity","type":"exact"},{"name":"acetylneuraminate cytidylyltransferase activity","type":"related"},{"name":"acylneuraminate cytidyltransferase activity","type":"related"},{"name":"cytidine 5'-monophospho-N-acetylneuraminic acid synthetase activity","type":"related"},{"name":"cytidine 5'-monophosphosialic acid synthetase activity","type":"related"},{"name":"cytidine 5-monophosphate N-acetylneuraminic acid synthetase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminic synthetase activity","type":"related"},{"name":"cytidine monophosphosialate pyrophosphorylase activity","type":"related"},{"name":"cytidine monophosphosialate synthetase activity","type":"related"},{"name":"cytidine monophosphosialic acid synthetase activity","type":"related"}],"termid":"GO:0008781"}


id: GO:0010161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated upon sensing of red light by a photoreceptor molecule. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"},{"relation_name":"is_a","term_name":"cellular response to red light","termid":"GO:0071491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"red light signaling pathway","synonyms":[{"name":"red light phototransduction","type":"exact"},{"name":"red light signal transduction","type":"exact"},{"name":"red light signalling pathway","type":"exact"}],"termid":"GO:0010161"}


id: MONDO:0013586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Chitotriosidase deficiency (obsolete MONDO:0013586)","secondary_identifiers":["OMIM:614122"],"synonyms":[{"name":"CHITD","type":"related"},{"name":"CHITOTRIOSIDASE deficiency","type":"related"},{"name":"Chitotriosidase deficiency","type":"exact"},{"name":"chitotriosidase deficiency","type":"exact"}],"termid":"MONDO:0013586","xrefs":{"Monarch":{"xref_id":"0013586"}}}


id: PBO:0016933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug68","termid":"PBO:0016933"}


id: MONDO:0060704
data:
  {"annotated_genes":["SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85770],"is_not":false,"summary":null,"term":"MONDO:0060704"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with spastic quadriplegia and brain abnormalities with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1633724","OMIM:617977","UMLS:C4693816"],"synonyms":[{"name":"Elhattab-Alkuraya syndrome","type":"related"},{"name":"NEDSBAS","type":"related"},{"name":"neurodevelopmental disorder with spastic quadriplegia and brain abnormalities with or without seizures","type":"exact"}],"termid":"MONDO:0060704","terms_by_termid":{"MONDO:0060704":null},"xrefs":{"Monarch":{"xref_id":"0060704"}}}


id: FYPO:0003294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UDP-galactose transmembrane transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal UDP-galactose transmembrane transport","synonyms":[{"name":"normal UDP-galactose transmembrane transport during mitotic cell cycle","type":"related"},{"name":"normal UDP-galactose transmembrane transport during vegetative growth","type":"exact"}],"termid":"FYPO:0003294"}


id: PBO:0079176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 5, pseudogene","termid":"PBO:0079176"}


id: FYPO:0004866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the post-anaphase array is larger, and contains more microtubules, than normal.","definition_xrefs":["PomBase:mah","PMID:18418055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal post-anaphase array morphology","termid":"FYPO:0004317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"enlarged post-anaphase array with increased number of microtubules","synonyms":[{"name":"enlarged PAA with increased number of microtubules","type":"exact"},{"name":"enlarged post-anaphase array with increased number of microtubules during mitotic cell cycle","type":"related"},{"name":"enlarged post-anaphase array with increased number of microtubules during vegetative growth","type":"exact"},{"name":"microtubules present in increased numbers in enlarged post-anaphase array","type":"exact"}],"termid":"FYPO:0004866"}


id: PBO:0078850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 5","termid":"PBO:0078850"}


id: PBO:0050192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene","termid":"PBO:0050192"}


id: PBO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Arrest Deficient","termid":"PBO:0003555"}


id: FYPO:0003305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which polar microtubules fail to interdigitate properly, and two partially or completely separated microtubule structures, usually V-shaped, each corresponding to one half of the spindle, are present.","definition_xrefs":["PomBase:mah","PMID:9348288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"output_of","term_name":"abnormal mitotic spindle midzone assembly","termid":"FYPO:0003304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000054","FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0002399"],"is_obsolete":false,"name":"separate mitotic half spindles present","synonyms":[{"name":"broken spindle interzone","type":"related"},{"name":"broken spindle midzone","type":"related"},{"name":"loss of interdigitation between mitotic half spindles","type":"exact"},{"name":"separate half spindles present during mitosis","type":"exact"},{"name":"separate half spindles present during mitotic cell cycle","type":"related"},{"name":"separate mitotic half spindles present during vegetative growth","type":"exact"},{"name":"spindle fraying","type":"related"}],"termid":"FYPO:0003305"}


id: PBO:0088153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Verprolin, proline-rich actin-associated protein; involved in cytoskeletal organization and cytokinesis; promotes actin nucleation and endocytosis; related to mammalian Wiskott-Aldrich syndrome protein (WASP)-interacting protein (WIP)","termid":"PBO:0088153"}


id: GO:0046804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-threonine and peptidyl-cysteine by the synthesis of (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide (3-methyl-L-lanthionine sulfoxide), as found in the antibiotic actagardine.","definition_xrefs":["RESID:AA0330"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide (obsolete GO:0046804)","synonyms":[{"name":"peptide cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulphoxide","type":"exact"}],"termid":"GO:0046804"}


id: MONDO:1011972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondromatosis, non-human animal","secondary_identifiers":["OMIA:002555"],"termid":"MONDO:1011972","xrefs":{"Monarch":{"xref_id":"1011972"}}}


id: FYPO:0006109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from subtelomeric regions are present at greater levels than normal.","definition_xrefs":["PomBase:mah","PMID:28404620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased siRNA level","termid":"FYPO:0004207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased subtelomeric transcript-derived siRNA level","synonyms":[{"name":"increased accumulation of siRNAs homologous to subtelomeres","type":"related"},{"name":"increased accumulation of subtelomeric transcript-derived siRNA","type":"exact"},{"name":"increased level of subtelomeric transcript-derived siRNA","type":"exact"},{"name":"increased subtelomere transcript-derived siRNA level","type":"exact"},{"name":"increased subtelomeric transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"increased subtelomeric transcript-derived siRNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006109"}


id: GO:0043288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving apocarotenoids, a class of compounds derived from the oxidative cleavage of carotenoids, many of which are biologically important e.g. retinal and abscisic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"apocarotenoid metabolic process","synonyms":[{"name":"apo carotenoid metabolic process","type":"exact"},{"name":"apocarotenoid metabolism","type":"exact"}],"termid":"GO:0043288"}


id: MONDO:0003654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade malignant bone-forming mesenchymal neoplasm arising from the surface of the bone. It occurs in childhood and usually affects the distal posterior femur, the proximal tibia, and proximal humerus. Painless swelling is the usual clinical sign. The prognosis is usually excellent.","definition_xrefs":["NCIT:C6589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric osteosarcoma","termid":"MONDO:0002623"},{"relation_name":"is_a","term_name":"juxtacortical osteosarcoma","termid":"MONDO:0006817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood parosteal osteosarcoma","secondary_identifiers":["DOID:5809","MEDGEN:272467","UMLS:C1332994"],"synonyms":[{"name":"childhood parosteal osteogenic sarcoma","type":"exact"},{"name":"childhood parosteal osteosarcoma","type":"exact"}],"termid":"MONDO:0003654","xrefs":{"Monarch":{"xref_id":"0003654"}}}


id: GO:0008398
data:
  {"annotated_genes":["SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88223],"is_not":false,"summary":null,"term":"GO:0008398"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 14alpha-methyl steroid + 3 O2 + 3 reduced [NADPH-hemoprotein reductase] = a delta14 steroid + formate + 4 H+ + 4 H2O + 3 oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:54028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"},{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sterol 14-demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.14.14.154","MetaCyc:1.14.13.70-RXN"],"synonyms":[{"name":"cytochrome P450 51 activity","type":"narrow"},{"name":"cytochrome P450 CYP51","type":"narrow"},{"name":"lanosterol 14-alpha-demethylase activity","type":"narrow"},{"name":"lanosterol 14-demethylase activity","type":"narrow"},{"name":"lanosterol 14alpha-demethylase activity","type":"related"},{"name":"obtusufoliol 14-demethylase activity","type":"narrow"},{"name":"sterol 14-alpha-demethylase activity","type":"related"},{"name":"sterol 14alpha-demethylase activity","type":"related"}],"termid":"GO:0008398","terms_by_termid":{"GO:0008398":null}}


id: PBO:0078084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC2L pseudogene 1","termid":"PBO:0078084"}


id: PBO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ageing","termid":"PBO:0002376"}


id: PBO:0031633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_gene_silencing","termid":"PBO:0031633"}


id: PBO:0053610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 644","termid":"PBO:0053610"}


id: MONDO:0030486
data:
  {"annotated_genes":["SJAG_04966","SJAG_01772"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85802,85803],"is_not":false,"summary":null,"term":"MONDO:0030486"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01772":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 32","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060939","MEDGEN:1794239","UMLS:C5562029","OMIM:619637"],"synonyms":[{"name":"DYT32","type":"exact"}],"termid":"MONDO:0030486","terms_by_termid":{"MONDO:0030486":null},"xrefs":{"Monarch":{"xref_id":"0030486"}}}


id: FYPO:0001523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing leptomycin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on leptomycin B","synonyms":[{"name":"normal cell population growth in presence of leptomycin B","type":"exact"},{"name":"normal cell population growth on leptomycin B","type":"exact"},{"name":"normal cellular response to leptomycin B","type":"related"},{"name":"normal vegetative cell population growth on leptomycin B","type":"exact"}],"termid":"FYPO:0001523"}


id: PR:P87317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC31F10.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31F10.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.16","synonyms":[{"name":"Spom972h-SPBC31F10.16","type":"exact"}],"termid":"PR:P87317"}


id: PBO:0005149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-3 phosphoglycerate dehydrogenase (predicted)","termid":"PBO:0005149"}


id: MONDO:0019879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 4q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 4, with highly variable phenotype typically characterized by psychomotor delay, intellectual disability, craniofacial dysmorphism (microcephaly, low-set, prominent ears, downslanting palpebral fissures, hypertelorism, epicanthic folds, broad, prominent nasal bridge, high arched and cleft palate, micro-/retrognathia), seizures, as well as tooth and digital anomalies (clinodactyly, polydactyly). Cardiac malformations, renal anomalies, cryptorchidism, hypotonia and hearing impairment have also been reported.","definition_xrefs":["Orphanet:96096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 4","termid":"MONDO:0016955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 4q","secondary_identifiers":["UMLS:C4706362","GARD:19312","SCTID:763273008","MEDGEN:1633392"],"synonyms":[{"name":"distal duplication 4q","type":"exact"},{"name":"distal trisomy type 4q","type":"exact"},{"name":"telomeric duplication 4q","type":"exact"},{"name":"trisomy 4qter","type":"exact"}],"termid":"MONDO:0019879","xrefs":{"Monarch":{"xref_id":"0019879"}}}


id: MONDO:0012485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the S1PR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 68","secondary_identifiers":["GARD:22625","OMIM:610419","UMLS:C1835854","MESH:C563669","DOID:0110519","MEDGEN:324374"],"synonyms":[{"name":"DFNB68","type":"narrow"},{"name":"S1PR2 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 68","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 68","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in S1PR2","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 68","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 68","type":"exact"},{"name":"deafness, autosomal recessive 68","type":"narrow"}],"termid":"MONDO:0012485","xrefs":{"Monarch":{"xref_id":"0012485"}}}


id: GO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of phospho-guanosine to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein guanylylation","synonyms":[{"name":"protein amino acid guanylylation","type":"exact"}],"termid":"GO:0018260"}


id: PBO:0078827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 4-1","termid":"PBO:0078827"}


id: MONDO:0007990
data:
  {"annotated_genes":["SJAG_02045","SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020738"},{"annotations":[85660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014755"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"multiple benign circumferential skin creases on limbs","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537575","UMLS:C0473586","Orphanet:2505","DOID:0112241","GARD:3589","MEDGEN:96881"],"synonyms":[{"name":"CCSF","type":"exact"},{"name":"CSCSC","type":"exact"},{"name":"Kunze Riehm syndrome","type":"related"},{"name":"Kunze-Riehm syndrome","type":"exact"},{"name":"Michelin tire baby syndrome","type":"related"},{"name":"Michelin tyre baby syndrome","type":"related"},{"name":"circumferential skin creases, Kunze type","type":"exact"},{"name":"congenital circumferential skin folds","type":"exact"},{"name":"skin creases, multiple benign ring-shaped, of limbs","type":"related"}],"termid":"MONDO:0007990","terms_by_termid":{"MONDO:0014755":null,"MONDO:0020738":null},"xrefs":{"Monarch":{"xref_id":"0007990"}}}


id: PBO:0087515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein complex involved in DNA replication, repair, recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087515"}


id: MONDO:1011225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, dog","secondary_identifiers":["OMIA:000337-9615"],"termid":"MONDO:1011225","xrefs":{"Monarch":{"xref_id":"1011225"}}}


id: PBO:0072195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 12","termid":"PBO:0072195"}


id: PBO:0014245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET family double bromodomain protein Brf2","termid":"PBO:0014245"}


id: PBO:0046412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopic P-granules 5 autophagy tethering factor","termid":"PBO:0046412"}


id: PBO:0059192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member G","termid":"PBO:0059192"}


id: PBO:0046903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member B, pseudogene","termid":"PBO:0046903"}


id: MONDO:0014266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing age related macular degeneration in which the cause of the disease is a mutation in the C9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"age-related macular degeneration","termid":"MONDO:0005150"},{"relation_name":"is_a","term_name":"age related macular degeneration, susceptibility to","termid":"MONDO:0100174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age related macular degeneration 15","secondary_identifiers":["MEDGEN:816372","OMIM:615591","DOID:0110027","UMLS:C3810042"],"synonyms":[{"name":"ARMD15","type":"exact"},{"name":"C9 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 15","type":"exact"},{"name":"age-related macular degeneration caused by mutation in C9","type":"exact"},{"name":"macular degeneration, age-related, 15","type":"related"},{"name":"macular degeneration, age-related, 15, susceptibility to","type":"exact"},{"name":"macular degeneration, age-related, type 15","type":"exact"}],"termid":"MONDO:0014266","xrefs":{"Monarch":{"xref_id":"0014266"}}}


id: GO:2001232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to prospore membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of protein localization to prospore membrane","termid":"GO:2001231"},{"relation_name":"positively_regulates","term_name":"protein localization to prospore membrane","termid":"GO:1902657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to prospore membrane","synonyms":[{"name":"positive regulation of protein localisation to prospore membrane","type":"exact"},{"name":"positive regulation of protein targeting to FSM","type":"related"},{"name":"positive regulation of protein targeting to ascospore-type prospore membrane","type":"related"},{"name":"positive regulation of protein targeting to forespore membrane","type":"related"},{"name":"positive regulation of protein targeting to prospore membrane","type":"related"},{"name":"positive regulation of protein-prospore membrane targeting","type":"related"}],"termid":"GO:2001232"}


id: MONDO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of angle-closure glaucoma.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary angle-closure glaucoma","termid":"MONDO:0001868"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute closed-angle glaucoma","secondary_identifiers":["UMLS:C0154946","DOID:13862","ICD9:365.22","MEDGEN:509735","SCTID:30041005"],"synonyms":[{"name":"acute angle-closure glaucoma","type":"exact"},{"name":"angle-closure glaucoma, acute","type":"exact"}],"termid":"MONDO:0001817","xrefs":{"Monarch":{"xref_id":"0001817"}}}


id: FYPO:0007624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial cytochrome c oxidase (respiratory chain complex IV) assembly is decreased.","definition_xrefs":["GO:0033617","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitochondrial respiratory chain complex assembly","termid":"FYPO:0007122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex IV assembly","synonyms":[{"name":"decreased mitochondrial cytochrome c oxidase assembly","type":"exact"},{"name":"decreased mitochondrial respiratory chain complex IV assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex IV assembly during vegetative growth","type":"exact"},{"name":"decreased respiratory chain complex IV assembly","type":"exact"}],"termid":"FYPO:0007624"}


id: GO:0021930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to granule cells. A granule cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:jid","GOC:dgh","PMID:15157725","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in external granule layer","termid":"GO:0021924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell precursor proliferation","termid":"GO:0021930"}


id: PBO:0057761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1976","termid":"PBO:0057761"}


id: GO:0044857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of plasma membrane rafts.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft organization","termid":"GO:0031579"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane raft organization","termid":"GO:0044857"}


id: MONDO:0859272
data:
  {"annotated_genes":["SJAG_01638"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86611],"is_not":false,"summary":null,"term":"MONDO:0859272"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with speech delay and variable ocular anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823967","OMIM:619989","UMLS:C5774194"],"termid":"MONDO:0859272","terms_by_termid":{"MONDO:0859272":null},"xrefs":{"Monarch":{"xref_id":"0859272"}}}


id: PBO:0043076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 5 subunit","termid":"PBO:0043076"}


id: PBO:0083512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ERG7/YHR072W","termid":"PBO:0083512"}


id: GO:0140608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a cysteine-type endopeptidase.","definition_xrefs":["PMID:32558991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activator activity","termid":"GO:0061133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity","synonyms":[{"name":"caspase activator activator activity","type":"narrow"}],"termid":"GO:0140608"}


id: MONDO:0006920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which blood glucose levels are high, but not high enough to be classified as type 2 diabetes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"prediabetes syndrome","secondary_identifiers":["EFO:1001121","MedDRA:10065542","MEDGEN:83928","DOID:11716","MESH:D011236","NCIT:C122685","UMLS:C0362046"],"synonyms":[{"name":"borderline diabetes","type":"exact"},{"name":"prediabetes","type":"exact"},{"name":"prediabetic state","type":"exact"}],"termid":"MONDO:0006920","xrefs":{"Monarch":{"xref_id":"0006920"}}}


id: GO:0102794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cinnamaldehyde + O2 + H2O = H+ + trans-cinnamate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamaldehyde:oxygen oxidoreductase activity (obsolete GO:0102794)","termid":"GO:0102794"}


id: MONDO:0009999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive Robinow syndrome (RRS) is the less common type of Robinow syndrome (RS) characterized by short-limb dwarfism, costovertebral segmentation defects and abnormalities of the head, face and external genitalia.","definition_xrefs":["Orphanet:1507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Robinow syndrome","termid":"MONDO:0019978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive Robinow syndrome","secondary_identifiers":["MESH:C535863","icd11.foundation:793292660","OMIM:268310","UMLS:C5399974","DOID:0060764","GARD:16568","MEDGEN:1770070"],"synonyms":[{"name":"COVESDEM syndrome","type":"exact"},{"name":"Covesdem syndrome","type":"related"},{"name":"Covesdem syndrome, formerly","type":"related"},{"name":"RRS","type":"exact"},{"name":"Robinow syndrome, autosomal recessive","type":"exact"},{"name":"Robinow syndrome, autosomal recessive, with Brachy-syn-polydactyly","type":"related"},{"name":"Robinow syndrome, autosomal recessive, with aplasia/hypoplasia of phalanges and metacarpals/metatarsals","type":"related"},{"name":"costovertebral segmentation defect with mesomelia","type":"related"},{"name":"costovertebral segmentation defect with mesomelia, formerly","type":"related"},{"name":"costovertebral segmentation defect-mesomelia syndrome","type":"exact"}],"termid":"MONDO:0009999","xrefs":{"Monarch":{"xref_id":"0009999"}}}


id: PBO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates eng1","termid":"PBO:0001955"}


id: PATO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000173 function (obsolete PATO:0000173)","termid":"PATO:0000173"}


id: MONDO:0010561
data:
  {"annotated_genes":["SJAG_01047"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85636],"is_not":false,"summary":null,"term":"MONDO:0010561"}]},"cv_name":"mondo","definition":"A rare genetic neurological disorder characterized by psychomotor and growth retardation, facial dysmorphism, digit abnormalities, and progressive skeletal changes.","definition_xrefs":["Orphanet:192"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"scoliosis","termid":"MONDO:0005392"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01047":null},"genotype_count":0,"is_obsolete":false,"name":"Coffin-Lowry syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3783","MESH:D038921","NANDO:1200660","ICD9:759.89","GARD:6123","NANDO:2200952","NORD:983","OMIM:303600","MEDGEN:75556","MESH:C536435","NCIT:C84643","SCTID:15182000","icd11.foundation:380089065","UMLS:C0265252"],"synonyms":[{"name":"CLS","type":"exact"},{"name":"COFFIN-Lowry syndrome","type":"related"},{"name":"Coffin Lowry Syndrome","type":"exact"},{"name":"Coffin syndrome","type":"related"},{"name":"Coffin syndrome 1","type":"related"},{"name":"Coffin-Lowry syndrome","type":"exact"},{"name":"Coffin-Lowry syndrome, X-linked dominant","type":"exact"},{"name":"dwarfism, lean spastic type","type":"related"},{"name":"intellectual disability with osteocartilaginous abnormalities","type":"related"},{"name":"lean spastic dwarfism","type":"related"},{"name":"mental retardation with osteocartilaginous abnormalities","type":"related"}],"termid":"MONDO:0010561","terms_by_termid":{"MONDO:0010561":null},"xrefs":{"Monarch":{"xref_id":"0010561"}}}


id: PR:O94441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo-transport protein ypp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.04","synonyms":[{"name":"Spom972h-ypp1","type":"exact"}],"termid":"PR:O94441"}


id: PBO:0087690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport and NPC biogenesis; also plays roles in several processes that may require localization of genes or chromosomes at the nuclear periphery, including double-strand break repair, transcription and chromatin silencing; homologous to human NUP107","termid":"PBO:0087690"}


id: PBO:0028079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype","termid":"PBO:0028079"}


id: PBO:0029882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029882"}


id: PBO:0078415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-1","termid":"PBO:0078415"}


id: MONDO:0007005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the rectum and the distal portion of the colon.","definition_xrefs":["MESH:D011350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"ulcerative proctosigmoiditis","secondary_identifiers":["MEDGEN:540639","UMLS:C0267390","ICD9:556.3","SCTID:52506002","EFO:1001223"],"termid":"MONDO:0007005","xrefs":{"Monarch":{"xref_id":"0007005"}}}


id: PBO:0064881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2CA divergent transcript","termid":"PBO:0064881"}


id: MONDO:0018028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetrasomy 5p is a rare chromosomal anomaly syndrome with variable phenotype principally characterized by developmental delay, growth retardation/short stature, hypotonia, seizures, venriculomegaly, hand and foot anomalies (e.g. clinodactyly, overlapping toes) and mosaic pigmentary skin changes. Patients may also present minor dysmorphic craniofacial features (incl. macrocephaly, upslanting palpebral fissures, hypertelorism, abnormal auricles, anteverted nasal tip, midface hypoplasia).","definition_xrefs":["Orphanet:3309"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 5","termid":"MONDO:0016942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrasomy 5p","secondary_identifiers":["MEDGEN:1638801","UMLS:C0795813","SCTID:766755003","GARD:18792"],"synonyms":[{"name":"Isochromosome 5p","type":"exact"},{"name":"tetrasomy type 5p","type":"exact"}],"termid":"MONDO:0018028","xrefs":{"Monarch":{"xref_id":"0018028"}}}


id: GO:0060159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a dopamine receptor signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of dopamine receptor signaling pathway","synonyms":[{"name":"regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060159"}


id: MONDO:0013861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyotrophic lateral sclerosis type 17 (obsolete MONDO:0013861)","termid":"MONDO:0013861","xrefs":{"Monarch":{"xref_id":"0013861"}}}


id: PBO:0029886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_stress_granule_disassembly","termid":"PBO:0029886"}


id: GO:1902904
data:
  {"annotated_genes":["SJAG_03455","SJAG_01894","SJAG_00279","SJAG_01993","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78904,92083,79807,75373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[74180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibril organization.","definition_xrefs":["PMID:23921388","GO_REF:0000058","GOC:PARL","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"negatively_regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of fibril organisation","type":"related"},{"name":"down regulation of fibril organization","type":"related"},{"name":"down-regulation of fibril organisation","type":"related"},{"name":"down-regulation of fibril organization","type":"related"},{"name":"downregulation of fibril organisation","type":"related"},{"name":"downregulation of fibril organization","type":"related"},{"name":"inhibition of fibril organisation","type":"narrow"},{"name":"inhibition of fibril organization","type":"narrow"},{"name":"negative regulation of fibril organisation","type":"related"}],"termid":"GO:1902904","terms_by_termid":{"GO:0034316":null,"GO:0051016":null}}


id: PBO:0059324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 9","termid":"PBO:0059324"}


id: GO:0005954
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins.","definition_xrefs":["PMID:20668654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcium- and calmodulin-dependent protein kinase complex","synonyms":[{"name":"CAMK2","type":"exact"},{"name":"CaMKII","type":"related"},{"name":"calcium/calmodulin-dependent protein kinase complex","type":"exact"}],"termid":"GO:0005954"}


id: FYPO:0006665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagy of the nucleus occurs to a greater extent than normal during G0 phase.","definition_xrefs":["GO:0044804","PMID:30116786","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased nucleophagy during G0","synonyms":[{"name":"increased autophagy of nucleus during G0","type":"exact"},{"name":"increased nucleophagy during cell quiescence","type":"exact"},{"name":"increased nucleophagy during quiescence","type":"exact"}],"termid":"FYPO:0006665"}


id: MONDO:0033201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 57","secondary_identifiers":["DOID:0111635","OMIM:618003","UMLS:C4693893","MEDGEN:1631180"],"synonyms":[{"name":"DFNB57","type":"narrow"},{"name":"deafness, autosomal recessive 57","type":"narrow"},{"name":"hearing loss, autosomal recessive 57","type":"exact"}],"termid":"MONDO:0033201","xrefs":{"Monarch":{"xref_id":"0033201"}}}


id: PBO:0062772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Z member 1 pseudogene","termid":"PBO:0062772"}


id: MOD:01333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C labeled L-isoleucine.","definition_xrefs":["PubMed:12716131","PubMed:12766232","Unimod:188#I"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-isoleucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01333"}


id: SO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U5 RNA is a component of both types of known spliceosome. The precise function of this molecule is unknown, though it is known that the 5' loop is required for splice site selection and p220 binding, and that both the 3' stem-loop and the Sm site are important for Sm protein binding and cap methylation.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U5_snRNA"],"synonyms":[{"name":"U5 small nuclear RNA","type":"exact"},{"name":"U5 snRNA","type":"exact"},{"name":"small nuclear RNA U5","type":"exact"},{"name":"snRNA U5","type":"exact"}],"termid":"SO:0000395"}


id: PBO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates fbp1","termid":"PBO:0000897"}


id: PBO:0039739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L1","termid":"PBO:0039739"}


id: GO:0030564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of 2'-O-ribose methylation in a tRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification guide activity","termid":"GO:0030557"},{"relation_name":"is_a","term_name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"tRNA 2'-O-ribose methylation guide activity","termid":"GO:0030564"}


id: GO:0046649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte activation","termid":"GO:0046649"}


id: MONDO:0019891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome 22 disorder","termid":"MONDO:0700026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy 22","secondary_identifiers":["MEDGEN:208644","NCIT:C36461","Orphanet:96123","UMLS:C0795878","GARD:19324"],"synonyms":[{"name":"Del(22)","type":"exact"},{"name":"deletion 22","type":"exact"},{"name":"monosomy type 22","type":"exact"}],"termid":"MONDO:0019891","xrefs":{"Monarch":{"xref_id":"0019891"}}}


id: PBO:0085725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the initiation of DNA replication; required for proper assembly of replication proteins at the origins of replication; interacts with the DDK-phosphorylated MCM complex and required for the recruitment of Cdc45p; localizes to nuclear foci that become diffuse upon DNA replication stress; homologous to the human Treslin/Ticrr protein","termid":"PBO:0085725"}


id: PBO:0042253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil serine rich protein 1","termid":"PBO:0042253"}


id: PBO:0071572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 1","termid":"PBO:0071572"}


id: PBO:0017636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion transmembrane transporter Zhf1","termid":"PBO:0017636"}


id: PBO:0027997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_multinucleate_aseptate_vegetative_cell","termid":"PBO:0027997"}


id: PBO:0081852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 785","termid":"PBO:0081852"}


id: FYPO:0004142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["GO:0000978","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"decreased transcription factor binding to promoter region","type":"related"},{"name":"reduced RNA polymerase II proximal promoter sequence-specific DNA binding","type":"exact"}],"termid":"FYPO:0004142"}


id: MONDO:0014719
data:
  {"annotated_genes":["SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85769],"is_not":false,"summary":null,"term":"MONDO:0014719"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066","MONDO:0700092","MONDO:0005559","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17806","MEDGEN:904159","OMIM:616647","DOID:0080458","Orphanet:457375","UMLS:C4225256"],"synonyms":[{"name":"DEE35","type":"exact"},{"name":"EIEE35","type":"exact"},{"name":"ITPA-related encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 35","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 35","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 35","type":"exact"}],"termid":"MONDO:0014719","terms_by_termid":{"MONDO:0014719":null},"xrefs":{"Monarch":{"xref_id":"0014719"}}}


id: PBO:0090649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc complex subunit Noc202","termid":"PBO:0090649"}


id: GO:0047642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-aldosyl1 beta-D-fructoside + D-aldose2 = D-aldose1 + alpha-D-aldosyl2 beta-D-fructoside.","definition_xrefs":["EC:2.4.1.162","MetaCyc:ALDOSE-BETA-FRUCTOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"aldose beta-D-fructosyltransferase activity","synonyms":[{"name":"aldose b-D-fructosyltransferase activity","type":"exact"},{"name":"alpha-D-aldosyl-beta-D-fructoside:aldose 1-beta-D-fructosyltransferase activity","type":"related"}],"termid":"GO:0047642"}


id: GO:0075279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the formation of a uredinium, a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uredinium development","synonyms":[{"name":"development of uredium","type":"exact"}],"termid":"GO:0075279"}


id: SO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structural variation whereby either a chromosome exists in addition to the normal chromosome complement or is lacking.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid_chromosome","synonyms":[{"name":"aneuploid chromosome","type":"exact"}],"termid":"SO:0000550"}


id: PBO:0060769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5","termid":"PBO:0060769"}


id: SO:1000156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transposition whereby a copy of the segment between the first two breaks listed is inserted at the third break; the insertion is in cytologically inverted orientation with respect to its flanking segment.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_interchromosomal_transposition","synonyms":[{"name":"(Drosophila)iTp","type":"related"},{"name":"inverted interchromosomal transposition","type":"exact"}],"termid":"SO:1000156"}


id: MONDO:0008195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paramyotonia congenita of Von Eulenburg is characterized by exercise- or cold-induced myotonia and muscle weakness. Prevalence is unknown. The syndrome is nonprogressive and is transmitted as an autosomal dominant trait. It is caused by mutations in the gene encoding the alpha subunit of the type IV voltage-gated sodium channel (SCN4A; 17q23.3).","definition_xrefs":["Orphanet:684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"},{"relation_name":"is_a","term_name":"SCN4A-related channelopathy","termid":"MONDO:0800468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paramyotonia congenita of Von Eulenburg","secondary_identifiers":["icd11.foundation:1740060527","GARD:7325","ICD9:359.29","OMIM:168300","NCIT:C122790","MEDGEN:113142","UMLS:C0221055","DOID:0111538","SCTID:41574007","NANDO:1200501"],"synonyms":[{"name":"Eulenburg disease","type":"related"},{"name":"PMC","type":"related"},{"name":"Von Eulenburg paramyotonia congenita","type":"related"},{"name":"myotonia congenita intermittens","type":"related"},{"name":"paralysis periodica Paramyotonica","type":"related"},{"name":"paramyotonia congenita","type":"exact"},{"name":"paramyotonia congenita of VON Eulenburg","type":"related"},{"name":"paramyotonia congenita of Von Eulenburg","type":"exact"},{"name":"paramyotonia congenita without cold paralysis","type":"related"}],"termid":"MONDO:0008195","xrefs":{"Monarch":{"xref_id":"0008195"}}}


id: FYPO:0005555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin loading is decreased during the mitotic cell cycle. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["PomBase:mah","GO:0061780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased mitotic cohesin loading","synonyms":[{"name":"decreased cohesin loading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin loading during vegetative growth","type":"exact"},{"name":"decreased mitotic cohesin association with chromatin","type":"exact"},{"name":"decreased mitotic cohesin localization to chromatin","type":"exact"},{"name":"reduced mitotic cohesin loading","type":"exact"}],"termid":"FYPO:0005555"}


id: GO:0036198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) without de novo synthesis.","definition_xrefs":["GOC:yaf","PMID:5387459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dTMP biosynthetic process","termid":"GO:0006231"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide salvage","termid":"GO:0010139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dTMP salvage","synonyms":[{"name":"dTMP biosynthesis via salvage pathway","type":"related"},{"name":"deoxythymidine monophosphate biosynthesis via salvage pathway","type":"related"}],"termid":"GO:0036198"}


id: GO:1901273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-dehydro-3-deoxy-D-gluconic acid.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00856","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"2-dehydro-3-deoxy-D-gluconic acid metabolic process","termid":"GO:1901272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconic acid catabolic process","synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconic acid breakdown","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid catabolism","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid degradation","type":"exact"}],"termid":"GO:1901273"}


id: GO:1990088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a [methyl-Co(III) methanol-specific corrinoid protein] + coenzyme M = methyl-coenzyme M + a [Co(I) methanol-specific corrinoid protein] + H+.","definition_xrefs":["RHEA:45208","GOC:hjd","PMID:10077852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"[methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase","secondary_identifiers":["EC:2.1.1.246","GO:0043851","MetaCyc:RXN-8096"],"synonyms":[{"name":"methanol-specific methylcobalamin: coenzyme M methyltransferase activity","type":"exact"},{"name":"methanol-specific methylcobalamin:CoM methyltransferase activity","type":"exact"},{"name":"methanol-specific methylcobalamin:coenzyme M methyltransferase activity","type":"exact"},{"name":"methylcobamide:CoM methyltransferase activity","type":"broad"},{"name":"methylcobamide:coenzyme M methyltransferase activity","type":"broad"}],"termid":"GO:1990088"}


id: GO:0038096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An Fc-gamma receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes.","definition_xrefs":["GOC:phg","PMID:12488490","PMID:15466916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"},{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway involved in phagocytosis","termid":"GO:0002433"},{"relation_name":"is_a","term_name":"Fc-gamma receptor signaling pathway","termid":"GO:0038094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"Fc-gamma receptor signaling pathway involved in phagocytosis","secondary_identifiers":["Reactome:R-HSA-2029480","Reactome:R-HSA-9664422"],"synonyms":[{"name":"Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:0038096"}


id: GO:0008471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4 benzenediol + O2 = 4 benzosemiquinone + 2 H2O.","definition_xrefs":["EC:1.10.3.2"],"gene_count":0,"genotype_count":0,"name":"obsolete laccase activity (obsolete GO:0008471)","synonyms":[{"name":"benzenediol:oxygen oxidoreductase activity","type":"related"},{"name":"laccase activity","type":"exact"},{"name":"p-diphenol oxidase activity","type":"related"},{"name":"urishiol oxidase activity","type":"related"},{"name":"urushiol oxidase activity","type":"related"}],"termid":"GO:0008471"}


id: PBO:0061845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncoprotein induced transcript 3","termid":"PBO:0061845"}


id: PBO:0083462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene KTR3","termid":"PBO:0083462"}


id: MONDO:0000931
data:
  {"annotated_genes":["SJAG_02748","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87016,84799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the endometrium. Representative examples include endometritis, endometrial hyperplasia, and endometrial carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"is_obsolete":false,"name":"endometrial disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:57473","SCTID:418632009","DOID:1005","NCIT:C3504","UMLS:C0151622"],"synonyms":[{"name":"disease of endometrium","type":"exact"},{"name":"disease or disorder of endometrium","type":"exact"},{"name":"disorder of endometrium","type":"exact"},{"name":"endometrial disorder","type":"exact"},{"name":"endometrium disease","type":"exact"},{"name":"endometrium disease or disorder","type":"exact"}],"termid":"MONDO:0000931","terms_by_termid":{"MONDO:0011962":null},"xrefs":{"Monarch":{"xref_id":"0000931"}}}


id: PBO:0076650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 5","termid":"PBO:0076650"}


id: PATO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being located or placed beneath the skin.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subdermal","synonyms":[{"name":"subcutaneous","type":"exact"}],"termid":"PATO:0002438"}


id: MONDO:0003110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the skin.","definition_xrefs":["NCIT:C4905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin hemangioma","secondary_identifiers":["MEDGEN:151951","SCTID:93471006","UMLS:C0687140","DOID:471"],"synonyms":[{"name":"angioma of skin","type":"exact"},{"name":"angioma of the skin","type":"exact"},{"name":"angiomatous naevus of skin","type":"exact"},{"name":"hemangioma of skin","type":"exact"},{"name":"hemangioma of the skin","type":"exact"},{"name":"hemangioma of zone of skin","type":"exact"},{"name":"skin angioma","type":"exact"},{"name":"skin hemangioma","type":"exact"},{"name":"zone of skin hemangioma","type":"exact"}],"termid":"MONDO:0003110","xrefs":{"Monarch":{"xref_id":"0003110"}}}


id: PBO:0052994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 5","termid":"PBO:0052994"}


id: MONDO:0037250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the testis during childhood.","definition_xrefs":["NCIT:C5053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood testicular neoplasm","secondary_identifiers":["MEDGEN:272472","UMLS:C1333010"],"synonyms":[{"name":"childhood neoplasm of testis","type":"exact"},{"name":"childhood neoplasm of the testis","type":"exact"},{"name":"childhood testicular neoplasm","type":"exact"},{"name":"neoplasm of testis of childhood","type":"exact"},{"name":"paediatric neoplasm of testis","type":"exact"},{"name":"paediatric neoplasm of the testis","type":"exact"},{"name":"paediatric testicular neoplasm","type":"exact"},{"name":"pediatric neoplasm of testis","type":"exact"},{"name":"pediatric neoplasm of the testis","type":"exact"},{"name":"pediatric testicular neoplasm","type":"exact"},{"name":"testicular tumor, childhood","type":"exact"}],"termid":"MONDO:0037250","xrefs":{"Monarch":{"xref_id":"0037250"}}}


id: PBO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YjeF family pyridoxamine-phosphate oxidase (predicted)","termid":"PBO:0002178"}


id: GO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eugenol, a colorless, aromatic, liquid hydrocarbon (C10H12O2) found in clove oil.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"eugenol metabolic process","termid":"GO:0042854"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"eugenol catabolic process","synonyms":[{"name":"4-allyl-2-methoxyphenol catabolic process","type":"exact"},{"name":"4-allyl-2-methoxyphenol catabolism","type":"exact"},{"name":"eugenic acid catabolic process","type":"exact"},{"name":"eugenic acid catabolism","type":"exact"},{"name":"eugenol breakdown","type":"exact"},{"name":"eugenol catabolism","type":"exact"},{"name":"eugenol degradation","type":"exact"}],"termid":"GO:0042856"}


id: GO:0046925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-D-phenylalanine.","definition_xrefs":["PMID:12696888","RESID:AA0341","PMID:36302388"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-(S-L-cysteinyl)-D-phenylalanine (obsolete GO:0046925)","termid":"GO:0046925"}


id: PR:O74559
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A surfeit locus protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04340","PANTHER:PTHR23427:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.06","secondary_identifiers":["UniProtKB:O74559"],"synonyms":[{"name":"Spom972h-SURF4","type":"exact"}],"termid":"PR:O74559"}


id: PBO:0012253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 2 (predicted)","termid":"PBO:0012253"}


id: PBO:0069404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 664, pseudogene","termid":"PBO:0069404"}


id: GO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta intraepithelial T cell differentiation","termid":"GO:0002304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"CD8-positive, gamma-delta intraepithelial T cell development","type":"related"},{"name":"CD8-positive, gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002305"}


id: PR:O60162
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sac11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19F5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.03","synonyms":[{"name":"Spom972h-sac11","type":"exact"}],"termid":"PR:O60162"}


id: GO:0060135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the mother that allows an embryo or fetus to develop within it.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal process involved in female pregnancy","termid":"GO:0060135"}


id: MONDO:0958127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis obliterans syndrome","termid":"MONDO:0015265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transplant-related bronchiolitis obliterans","secondary_identifiers":["Orphanet:658602"],"termid":"MONDO:0958127","xrefs":{"Monarch":{"xref_id":"0958127"}}}


id: GO:0007268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["MeSH:D009435","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemical synaptic transmission","secondary_identifiers":["Reactome:R-HSA-442729","Reactome:R-HSA-442742","Reactome:R-HSA-451308","Reactome:R-HSA-9619229","Reactome:R-HSA-9620244","Reactome:R-HSA-442720","Reactome:R-HSA-451307","Reactome:R-HSA-112316","Wikipedia:Neurotransmission","Reactome:R-HSA-9619483"],"synonyms":[{"name":"neurotransmission","type":"related"},{"name":"signal transmission across a synapse","type":"broad"},{"name":"synaptic transmission","type":"broad"}],"termid":"GO:0007268"}


id: PBO:0054993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2408","termid":"PBO:0054993"}


id: PBO:0005082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gma12","termid":"PBO:0005082"}


id: PBO:0068451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 27, pseudogene","termid":"PBO:0068451"}


id: PBO:0071089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 91","termid":"PBO:0071089"}


id: GO:0102572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N5-phenyl-L-glutamine + H2O = L-glutamate + aniline + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-glutamylanilide hydrolase activity","secondary_identifiers":["MetaCyc:RXN-15251","RHEA:50684"],"termid":"GO:0102572"}


id: PATO:0001442
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer includes all its components.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wholeness","termid":"PATO:0001442"}


id: PBO:0067002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 6, pseudogene","termid":"PBO:0067002"}


id: GO:0021728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","GOC:curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior reticular formation development","termid":"GO:0021728"}


id: PBO:0031302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-auxotrophy","termid":"PBO:0031302"}


id: GO:0015661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-lysine from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"},{"relation_name":"is_a","term_name":"L-amino acid efflux transmembrane transporter activity","termid":"GO:0034639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-lysine efflux transmembrane transporter activity","synonyms":[{"name":"L-lysine exporter activity","type":"exact"},{"name":"L-lysine, 2,6-diaminohexanoic acid efflux transmembrane transporter activity","type":"exact"}],"termid":"GO:0015661"}


id: PBO:0003185
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.2","termid":"PBO:0003185"}


id: GO:0005823
data:
  {"annotated_genes":["SJAG_02795","SJAG_02246","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99638,96629,98056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the spindle pole body; the central plaque is embedded in the nuclear envelope.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"central plaque of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005823","terms_by_termid":{"GO:0061493":null}}


id: PBO:0090988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp36","termid":"PBO:0090988"}


id: PBO:0081444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 300 pseudogene 1","termid":"PBO:0081444"}


id: GO:0051379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"catecholamine binding","termid":"GO:1901338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"epinephrine binding","synonyms":[{"name":"adrenaline binding","type":"exact"}],"termid":"GO:0051379"}


id: GO:0019402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactitol metabolic process","synonyms":[{"name":"galactitol metabolism","type":"exact"}],"termid":"GO:0019402"}


id: PBO:0065009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 13","termid":"PBO:0065009"}


id: GO:0031508
data:
  {"annotated_genes":["SJAG_03128","SJAG_01075","SJAG_03193","SJAG_04574","SJAG_03916","SJAG_02401","SJAG_03356","SJAG_00302","SJAG_03997","SJAG_03042","SJAG_01579","SJAG_00335","SJAG_00961","SJAG_02621","SJAG_03689","SJAG_02846","SJAG_03543","SJAG_03624","SJAG_00934","SJAG_04061","SJAG_00414","SJAG_01008","SJAG_02409","SJAG_03844","SJAG_04039","SJAG_02594","SJAG_04253","SJAG_00087","SJAG_04141","SJAG_01599","SJAG_04942","SJAG_01675","SJAG_03680","SJAG_00756","SJAG_02119","SJAG_01540","SJAG_01601","SJAG_02778","SJAG_02725","SJAG_04030","SJAG_00058","SJAG_02576","SJAG_00142","SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71971,89963,91830,92583,93204,93839,98039,102567,103014,103879,107958,111068,111904,112420,112421,112422,113099,113792,114222],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[90940],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090053"},{"annotations":[96960,100088],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[115796,117907,93852,111007,114109,91029,114376,110451,88580,110286,117511,118627,88525,113476,112009,96502,98916,99354,115231,117794,106348,95098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"The compaction of chromatin located adjacent to the CENP-A rich centromere 'central core' and characterized by methylation of histone H3K9, into heterochromatin, resulting in the repression of transcription at pericentric DNA.","definition_xrefs":["GOC:mah","PMID:20206496","PMID:22729156","PMID:14612388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00142":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01008":null,"SJAG_01075":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01601":null,"SJAG_01675":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02576":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_03042":null,"SJAG_03128":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03543":null,"SJAG_03624":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04574":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990141","GO:0030702"],"synonyms":[{"name":"centric heterochromatin formation","type":"related"},{"name":"centromere chromatin silencing","type":"exact"},{"name":"centromeric heterochromatin biosynthesis","type":"exact"},{"name":"centromeric heterochromatin formation","type":"exact"},{"name":"centromeric silencing","type":"exact"},{"name":"chromatin silencing at centromere","type":"exact"},{"name":"chromatin silencing at centromere outer repeat region","type":"narrow"},{"name":"chromatin silencing at pericentric region","type":"related"},{"name":"heterochromatic silencing at centromere","type":"exact"},{"name":"pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0031508","terms_by_termid":{"GO:0031508":null,"GO:0090052":null,"GO:0090053":null,"GO:0140727":null}}


id: PBO:0089831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase","termid":"PBO:0089831"}


id: MONDO:1010258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glomerulonephritis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis, non-human animal","termid":"MONDO:1010259"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomerulonephritis, non-human animal","secondary_identifiers":["OMIA:000413"],"termid":"MONDO:1010258","xrefs":{"Monarch":{"xref_id":"1010258"}}}


id: PBO:0003073
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by cAMP signaling pathway","termid":"PBO:0003073"}


id: PBO:0049996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 2","termid":"PBO:0049996"}


id: GO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gluconate dehydrogenase activity","termid":"GO:0008875"}


id: PBO:0048667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 2","termid":"PBO:0048667"}


id: FYPO:0005988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule anchoring at the cell cortex of the cell tip does not occur during the meiotic cell cycle. Normally, anchoring maintains the localization of microtubules with their plus ends at the cell cortex.","definition_xrefs":["PomBase:mah","PMID:25736293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0000138"],"is_obsolete":false,"name":"abolished microtubule anchoring at cell cortex of cell tip during meiotic cell cycle","synonyms":[{"name":"abolished microtubule anchoring at cell tip cortex during meiotic cell cycle","type":"exact"},{"name":"abolished microtubule cortical anchoring at cell tip during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005988"}


id: MONDO:1012170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lower motor neuron disease, non-human animal","termid":"MONDO:1011848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, sheep","secondary_identifiers":["OMIA:000662-9940"],"termid":"MONDO:1012170","xrefs":{"Monarch":{"xref_id":"1012170"}}}


id: MONDO:1012783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any spinocerebellar ataxia that occurs in dogs due to a mutation in the KCNJ10 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia, KCNJ10-related, dog","secondary_identifiers":["OMIA:002089-9615"],"synonyms":[{"name":"SAMS","type":"exact"},{"name":"SDCA1","type":"exact"},{"name":"ataxia, cerebellar, KCNJ10-related, dog","type":"exact"},{"name":"spinocerebellar ataxia with myokymia, seizures or both","type":"related"},{"name":"spongy degeneration with cerebellar ataxia 1","type":"related"}],"termid":"MONDO:1012783","xrefs":{"Monarch":{"xref_id":"1012783"}}}


id: CHEBI:192760
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A benzoate ester resulting from the formal condensation of the carboxy group of vanillic acid with the hydroxy group of cyclohexanol.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mochimganine","termid":"CHEBI:192760"}


id: PBO:0038601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with coiled-coil, ankyrin repeat and PH domains 2","termid":"PBO:0038601"}


id: GO:0042245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the repair of damaged RNA.","definition_xrefs":["PMID:11000254","PMID:11070075","UniProtKB-KW:KW-0692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA repair","termid":"GO:0042245"}


id: GO:1902887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of proteasome-activating ATPase activity.","definition_xrefs":["GOC:di","PMID:23995839","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of proteasome-activating ATPase activity (obsolete GO:1902887)","synonyms":[{"name":"activation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"narrow"},{"name":"activation of proteasomal ATPase activity","type":"narrow"},{"name":"activation of proteasome channel gating activity","type":"narrow"},{"name":"activation of proteasome channel opening activity","type":"narrow"},{"name":"activation of proteasome-activating ATPase activity","type":"narrow"},{"name":"positive regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"positive regulation of proteasomal ATPase activity","type":"exact"},{"name":"positive regulation of proteasome channel gating activity","type":"narrow"},{"name":"positive regulation of proteasome channel opening activity","type":"narrow"},{"name":"up regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"up regulation of proteasomal ATPase activity","type":"exact"},{"name":"up regulation of proteasome channel gating activity","type":"narrow"},{"name":"up regulation of proteasome channel opening activity","type":"narrow"},{"name":"up regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"up-regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"up-regulation of proteasomal ATPase activity","type":"exact"},{"name":"up-regulation of proteasome channel gating activity","type":"narrow"},{"name":"up-regulation of proteasome channel opening activity","type":"narrow"},{"name":"up-regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"upregulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"upregulation of proteasomal ATPase activity","type":"exact"},{"name":"upregulation of proteasome channel gating activity","type":"narrow"},{"name":"upregulation of proteasome channel opening activity","type":"narrow"},{"name":"upregulation of proteasome-activating ATPase activity","type":"exact"}],"termid":"GO:1902887"}


id: PBO:0079645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 R2","termid":"PBO:0079645"}


id: PBO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rhp51","termid":"PBO:0001681"}


id: GO:0046906
data:
  {"annotated_genes":["SJAG_02794","SJAG_04823","SJAG_02744","SJAG_04217","SJAG_02646","SJAG_02398","SJAG_03249","SJAG_02982","SJAG_03750","SJAG_05027","SJAG_03929","SJAG_MIT04"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77788,94396,70580,67262,58828,77966,57225,118840,64542,70039,76405,61275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0020037"}]},"cv_name":"molecular_function","definition":"Binding to a tetrapyrrole, a compound containing four pyrrole nuclei variously substituted and linked to each other through carbons at the alpha position.","definition_xrefs":["GOC:curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":12,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_02794":null,"SJAG_02982":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04823":null,"SJAG_05027":null,"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tetrapyrrole binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin binding","type":"narrow"}],"termid":"GO:0046906","terms_by_termid":{"GO:0020037":null}}


id: MONDO:0056798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"disorder of appendix","secondary_identifiers":["UMLS:C0267613","SCTID:18526009","EFO:0009542","ICD10CM:K35-K38","ICD9:543.9","MEDGEN:540821","DOID:60000"],"synonyms":[{"name":"appendiceal disease","type":"exact"},{"name":"appendix disease","type":"exact"},{"name":"disease of appendix","type":"exact"},{"name":"disease of vermiform appendix","type":"exact"},{"name":"disease or disorder of vermiform appendix","type":"exact"},{"name":"disorder of appendix","type":"exact"},{"name":"disorder of vermiform appendix","type":"exact"},{"name":"vermiform appendix disease","type":"exact"},{"name":"vermiform appendix disease or disorder","type":"exact"}],"termid":"MONDO:0056798","xrefs":{"Monarch":{"xref_id":"0056798"}}}


id: PBO:0047902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q36)","termid":"PBO:0047902"}


id: MOD:00987
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a chlorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated residue","termid":"MOD:00753"},{"relation_name":"is_a","term_name":"halogenated tyrosine","termid":"MOD:00985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlorinated tyrosine","synonyms":[{"name":"ClTyr","type":"exact"}],"termid":"MOD:00987"}


id: MONDO:0971008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyloid neuropathy","termid":"MONDO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"amyloidosis, hereditary systemic 3","secondary_identifiers":["OMIM:620657","UMLS:C4551500","MEDGEN:1635231"],"termid":"MONDO:0971008","xrefs":{"Monarch":{"xref_id":"0971008"}}}


id: PBO:0042561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 3","termid":"PBO:0042561"}


id: GO:0032706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-22 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-22 production","termid":"GO:0032666"},{"relation_name":"negatively_regulates","term_name":"interleukin-22 production","termid":"GO:0032626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-22 production","secondary_identifiers":["GO:0045394"],"synonyms":[{"name":"down regulation of interleukin-22 production","type":"exact"},{"name":"down-regulation of interleukin-22 production","type":"exact"},{"name":"downregulation of interleukin-22 production","type":"exact"},{"name":"inhibition of interleukin-22 production","type":"narrow"},{"name":"negative regulation of IL-22 production","type":"exact"},{"name":"negative regulation of interleukin-22 biosynthetic process","type":"narrow"}],"termid":"GO:0032706"}


id: MONDO:0012259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colloid cysts of the third ventricle are non-cancerous brain lesions. The third ventricle is a cavity in the brain that is filled with cerebral spinal fluid (CSF). Colloid cysts can cause blockages resulting in a build up of CSF in the brain (hydrocephalus) and increased pressure. Some colloid cysts are asymptomatic while others cause neurological symptoms, such as headaches, swelling of the optic nerve (papilledema), and drop attacks. When symptoms are present onset tends to be in the third to sixth decade of life. While uncommon, symptoms of colloid cyst can become life threatening.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colloid cysts of third ventricle","secondary_identifiers":["UMLS:C0266481","OMIM:609363","MESH:C535966","MEDGEN:82744"],"synonyms":[{"name":"colloid cysts of third ventricle","type":"exact"},{"name":"neuroepithelial cysts of third ventricle","type":"related"}],"termid":"MONDO:0012259","xrefs":{"Monarch":{"xref_id":"0012259"}}}


id: MONDO:0016456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The newly described 5q14.3 microdeletion syndrome includes severe intellectual deficit with no speech, stereotypic movements and epilepsy.","definition_xrefs":["Orphanet:228384"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 5","termid":"MONDO:0016904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5q14.3 microdeletion syndrome","secondary_identifiers":["UMLS:C4304529","GARD:12166","SCTID:719661007","MEDGEN:930198"],"synonyms":[{"name":"5q14.3 deletion syndrome","type":"related"},{"name":"Del(5)(q14.3)","type":"exact"},{"name":"autosomal dominant intellectual disability 20","type":"related"},{"name":"chromosome 5q14.3 deletion syndrome","type":"related"},{"name":"monosomy 5q14.3","type":"exact"}],"termid":"MONDO:0016456","xrefs":{"Monarch":{"xref_id":"0016456"}}}


id: PBO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsense-mediated decay protein Upf2","termid":"PBO:0001566"}


id: PBO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein Mug20","termid":"PBO:0001854"}


id: PBO:0039374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antagonist of mitotic exit network 1 homolog","termid":"PBO:0039374"}


id: PBO:0079544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 6","termid":"PBO:0079544"}


id: GO:0060939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epicardial-derived cardiac fibroblast over time, from its formation to the mature state. A epicardial-derived cardiac fibroblast is a connective tissue cell of the heart that arises from the epicardium and secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell development","termid":"GO:0060936"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}


id: MONDO:0044783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well circumscribed, low grade neoplasm that arises from the breast. It is characterized by the presence of sheets of malignant epithelial cells that are supported by fibrovascular structures. When there is an invasive component present, it is usually a mucinous carcinoma.","definition_xrefs":["NCIT:C6870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast papillary carcinoma","termid":"MONDO:0003532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"solid papillary breast carcinoma","secondary_identifiers":["ONCOTREE:SPC","MEDGEN:236831","UMLS:C1336027"],"synonyms":[{"name":"solid Papillary breast carcinoma","type":"exact"},{"name":"solid Papillary carcinoma of the breast","type":"exact"}],"termid":"MONDO:0044783","xrefs":{"Monarch":{"xref_id":"0044783"}}}


id: PBO:0034301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tributary_of","termid":"PBO:0034301"}


id: GO:1905806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse pruning.","definition_xrefs":["GOC:TermGenie","PMID:27779093","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse pruning","synonyms":[{"name":"regulation of synapse clearance","type":"exact"},{"name":"regulation of synapse disassembly","type":"exact"},{"name":"regulation of synapse elimination","type":"exact"},{"name":"regulation of synapse removal","type":"exact"}],"termid":"GO:1905806"}


id: PBO:0042378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD209 molecule","termid":"PBO:0042378"}


id: PR:000028945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase oxidized form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA/Ox+","pombase_gene_id":"SPAC29E6.05c","synonyms":[{"name":"MSRA/Ox+","type":"exact"},{"name":"PomBase_original_PRO_term_name: peptide methionine sulfoxide reductase oxidized form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-MSRA/Ox+","type":"exact"}],"termid":"PR:000028945"}


id: PBO:0052714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 6","termid":"PBO:0052714"}


id: PBO:0027521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle","termid":"PBO:0027521"}


id: GO:0035028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"leading edge cell fate commitment","termid":"GO:0035027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell fate determination","termid":"GO:0035028"}


id: GO:0043896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic linkages in (1->6)-alpha-D-glucans and derived oligosaccharides.","definition_xrefs":["EC:3.2.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"glucan 1,6-alpha-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.70-RXN"],"synonyms":[{"name":"exo-1,6-alpha-glucosidase activity","type":"related"},{"name":"exo-1,6-beta-glucosidase","type":"related"},{"name":"glucan alpha-1,6-D-glucohydrolase activity","type":"related"},{"name":"glucan-1,6-alpha-glucosidase activity","type":"exact"},{"name":"glucodextranase activity","type":"related"},{"name":"glucodextrinase","type":"broad"}],"termid":"GO:0043896"}


id: PBO:0090673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome preservation factor, Stm1 homolog Oga1","termid":"PBO:0090673"}


id: PBO:0078796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 16-3","termid":"PBO:0078796"}


id: PBO:0090083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn5","termid":"PBO:0090083"}


id: PBO:0085449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to bacterial Hsp31 and yeast Hsp31p, Hsp32p, and Hsp33p; DJ-1/ThiJ/PfpI superfamily member; predicted involvement in pyridoxine metabolism; induced by mild heat stress and copper deprivation","termid":"PBO:0085449"}


id: GO:1905115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral attachment of mitotic spindle microtubules to kinetochore.","definition_xrefs":["PMID:22375062","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902423"},{"relation_name":"regulates","term_name":"lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0099607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000070"],"is_obsolete":false,"name":"regulation of lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1905115"}


id: GO:0080047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-beta-L-galactose + phosphate = beta-L-galactose-1-phosphate + GDP.","definition_xrefs":["RHEA:27698","PMID:17462988","PMID:18463094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"GDP-L-galactose phosphorylase activity","secondary_identifiers":["MetaCyc:RXNQT-4141","GO:0010475","EC:2.7.7.69"],"synonyms":[{"name":"GDP:galactose-1-phosphate guanyltransferase activity","type":"exact"},{"name":"galactose-1-phosphate guanylyltransferase (GDP) activity","type":"exact"}],"termid":"GO:0080047"}


id: GO:0033685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of luteinizing hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gonadotropin secretion","termid":"GO:0032277"},{"relation_name":"is_a","term_name":"regulation of luteinizing hormone secretion","termid":"GO:0033684"},{"relation_name":"negatively_regulates","term_name":"luteinizing hormone secretion","termid":"GO:0032275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of luteinizing hormone secretion","synonyms":[{"name":"down regulation of luteinizing hormone secretion","type":"exact"},{"name":"down-regulation of luteinizing hormone secretion","type":"exact"},{"name":"downregulation of luteinizing hormone secretion","type":"exact"},{"name":"inhibition of luteinizing hormone secretion","type":"narrow"}],"termid":"GO:0033685"}


id: PATO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000191 learning_and memory (obsolete PATO:0000191)","termid":"PATO:0000191"}


id: GO:0018750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biuret + H2O = urea + CO2 + NH3.","definition_xrefs":["EC:3.5.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"biuret amidohydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r0846","RHEA:17525"],"termid":"GO:0018750"}


id: PBO:0044836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 124","termid":"PBO:0044836"}


id: PBO:0042238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 1","termid":"PBO:0042238"}


id: GO:0032877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA endoreduplication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA endoreduplication","termid":"GO:0032875"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication","termid":"GO:2000105"},{"relation_name":"positively_regulates","term_name":"DNA endoreduplication","termid":"GO:0042023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"positive regulation of DNA endoreduplication","synonyms":[{"name":"activation of DNA endoreduplication","type":"narrow"},{"name":"positive regulation of DNA endoreplication","type":"exact"},{"name":"positive regulation of DNA re-duplication","type":"exact"},{"name":"stimulation of DNA endoreduplication","type":"narrow"},{"name":"up regulation of DNA endoreduplication","type":"exact"},{"name":"up-regulation of DNA endoreduplication","type":"exact"},{"name":"upregulation of DNA endoreduplication","type":"exact"}],"termid":"GO:0032877"}


id: PBO:0029535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_normal_volume_spheroid_vegetative_cell","termid":"PBO:0029535"}


id: PBO:0067628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 800, pseudogene","termid":"PBO:0067628"}


id: PBO:0071436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 42","termid":"PBO:0071436"}


id: PBO:0050683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 10","termid":"PBO:0050683"}


id: PBO:0090361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, unknown specificity","termid":"PBO:0090361"}


id: PBO:0111899
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain","termid":"PBO:0111899"}


id: MONDO:0015585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptogenic late-onset epileptic spasms is a rare epilepsy syndrome characterized by late-onset (after 1 year old) epileptic spasms that occur in clusters, associated with tonic seizures, atypical absences and cognitive deterioration. Language difficulties and behavior problems are frequently present. EEG is characterized by a temporal, or temporofrontal, slow wave or spike focus combined with synchronous spike-waves and no hypsarrhythmia or background activity.","definition_xrefs":["Orphanet:163708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"cryptogenic late-onset epileptic spasms","secondary_identifiers":["icd11.foundation:457378168","GARD:20050","MEDGEN:1666207","UMLS:C4755310"],"synonyms":[{"name":"late-onset infantile spasms","type":"exact"}],"termid":"MONDO:0015585","xrefs":{"Monarch":{"xref_id":"0015585"}}}


id: FYPO:0003310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which IMP cyclohydrolase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal IMP cyclohydrolase activity","termid":"FYPO:0003309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished IMP cyclohydrolase activity","synonyms":[{"name":"IMP cyclohydrolase activity abolished","type":"exact"}],"termid":"FYPO:0003310"}


id: PBO:0086455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; YPR071W is not an essential gene; YPR071W has a paralog, YIL029C, that arose from a single-locus duplication","termid":"PBO:0086455"}


id: MONDO:0012270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Tukel syndrome","secondary_identifiers":["MESH:C536925","UMLS:C1836217","icd11.foundation:2132105652","DOID:0081021","OMIM:609428","MEDGEN:332153","GARD:9814"],"synonyms":[{"name":"Cfeom-U","type":"related"},{"name":"Tukel syndrome","type":"exact"},{"name":"congenital extraocular muscle fibrosis with ulnar hand anomalies","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, 4","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, with ulnar hand anomalies","type":"related"}],"termid":"MONDO:0012270","xrefs":{"Monarch":{"xref_id":"0012270"}}}


id: GO:0006261
data:
  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id: PBO:0089698
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein Bro1","termid":"PBO:0089698"}


id: PBO:0031107
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damaging_agents","termid":"PBO:0031107"}


id: PBO:0086898
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter in the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake","termid":"PBO:0086898"}


id: PBO:0034713
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  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens RAB6A","termid":"PBO:0034713"}


id: PBO:0047691
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 3 ligand","termid":"PBO:0047691"}


id: PBO:0048747
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1B","termid":"PBO:0048747"}


id: GO:0019532
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: GO:0046167
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate metabolic process","termid":"GO:0006072"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate biosynthetic process","synonyms":[{"name":"glycerol-3-phosphate anabolism","type":"exact"},{"name":"glycerol-3-phosphate biosynthesis","type":"exact"},{"name":"glycerol-3-phosphate formation","type":"exact"},{"name":"glycerol-3-phosphate synthesis","type":"exact"}],"termid":"GO:0046167"}


id: MONDO:0011362
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id: GO:0009985
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroflavonol(thiole) lyase activity (obsolete GO:0009985)","synonyms":[{"name":"dihydroflavonol(thiole) lyase activity","type":"exact"}],"termid":"GO:0009985"}


id: GO:0090649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose.","definition_xrefs":["PMID:21525936","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen-glucose deprivation","synonyms":[{"name":"response to OGD","type":"exact"}],"termid":"GO:0090649"}


id: PBO:0063995
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 29","termid":"PBO:0063995"}


id: FYPO:0006674
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished during conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during mating","synonyms":[{"name":"abolished protein localisation to nucleus during mating","type":"exact"},{"name":"abolished protein localization to nucleus during conjugation","type":"exact"},{"name":"nuclear exclusion during mating","type":"related"},{"name":"nuclear protein exclusion during mating","type":"related"},{"name":"protein localization to nucleus abolished during mating","type":"exact"}],"termid":"FYPO:0006674"}


id: MONDO:0020351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blake pouch cyst is a non-syndromic, usually benign, cystic malformation of the posterior fossa characterized by a midline outpouching of the superior medullary velum into the cisterna magna that results from failure of the rudimental fourth ventricular tela choroidea to regress during embryogenesis. Patients can be asymptomatic or present in childhood or adulthood with clinical manifestations of hydrocephalus, such as headache, hypotonia, vertigo, syncope, vomiting, blurred or double vision, nystagmus, papilledema, and delayed gait development.","definition_xrefs":["Orphanet:98922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Blake pouch cyst","secondary_identifiers":["GARD:19603","UMLS:C3662124","MEDGEN:783279"],"termid":"MONDO:0020351","xrefs":{"Monarch":{"xref_id":"0020351"}}}


id: GO:0047620
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acylglycerol = ADP + acyl-sn-glycerol 3-phosphate.","definition_xrefs":["EC:2.7.1.94","MetaCyc:ACYLGLYCEROL-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"acylglycerol kinase activity","secondary_identifiers":["RHEA:19293","Reactome:R-HSA-5696074"],"synonyms":[{"name":"ATP:acylglycerol 3-phosphotransferase activity","type":"related"},{"name":"MGK","type":"related"},{"name":"monoacylglycerol kinase (phosphorylating)","type":"related"},{"name":"monoacylglycerol kinase activity","type":"related"},{"name":"monoglyceride kinase activity","type":"related"},{"name":"monoglyceride phosphokinase activity","type":"related"},{"name":"sn-2-monoacylglycerol kinase activity","type":"related"}],"termid":"GO:0047620"}


id: GO:1904212
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iodide transmembrane transport.","definition_xrefs":["PMID:20392814","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"is_a","term_name":"regulation of iodide transport","termid":"GO:1904201"},{"relation_name":"regulates","term_name":"iodide transmembrane transport","termid":"GO:1904200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of iodide transmembrane transport","termid":"GO:1904212"}


id: GO:0060772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of leaf primordia around the center of a shoot apical meristem.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf phyllotactic patterning","termid":"GO:0060772"}


id: PBO:0049306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 1","termid":"PBO:0049306"}


id: PBO:0038307
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_degradation","termid":"PBO:0038307"}


id: PBO:0016996
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP U2 Auxiliary Factor","termid":"PBO:0016996"}


id: FYPO:0005188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to hydroxyurea exposure begins later than normal. Normally, cell cycle progression is slowed or arrested transiently following exposure to hydroxyurea.","definition_xrefs":["PMID:19546237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000711"},{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of mitotic cell cycle arrest during cellular response to hydroxyurea","synonyms":[{"name":"delayed cell cycle arrest during cellular response to hydroxyurea","type":"exact"},{"name":"delayed cell cycle arrest in response to hydroxyurea","type":"exact"},{"name":"delayed onset of cell cycle arrest during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"delayed onset of mitotic cell cycle arrest during cellular response to HU","type":"exact"}],"termid":"FYPO:0005188"}


id: PBO:0089639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0C","termid":"PBO:0089639"}


id: PBO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1/S-specific B-type cyclin Cig2","termid":"PBO:0001694"}


id: GO:2000116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cysteine-type endopeptidase activity (obsolete GO:2000116)","synonyms":[{"name":"regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2000116"}


id: FYPO:0005009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:22976295"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005009)","synonyms":[{"name":"decreased protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"decreased protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"},{"name":"reduced protein serine phosphorylation at RxxS site during vegetative growth","type":"exact"}],"termid":"FYPO:0005009"}


id: FYPO:0006335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from one or more microtubule organizing centers (MTOCs) occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah","GO:0051418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"decreased microtubule nucleation during vegetative growth","synonyms":[{"name":"decreased microtubule nucleation by microtubule organizing center during vegetative growth","type":"exact"},{"name":"decreased microtubule nucleation during mitotic cell cycle","type":"related"},{"name":"reduced microtubule nucleation during vegetative growth","type":"exact"}],"termid":"FYPO:0006335"}


id: GO:0070075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the aqueous layer of the tear film from the lacrimal glands. Tears are the liquid product of a process of lacrimation to clean and lubricate the eyes. Tear fluid contains water, mucin, lipids, lysozyme, lactoferrin, lipocalin, lacritin, immunoglobulins, glucose, urea, sodium, and potassium.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"tear secretion","termid":"GO:0070075"}


id: GO:0000128
data:
  {"annotated_genes":["SJAG_02380","SJAG_04720","SJAG_04191","SJAG_03484","SJAG_03802","SJAG_04723","SJAG_00239","SJAG_00926","SJAG_01253","SJAG_01975","SJAG_03473","SJAG_00910"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69613,76284,76751,78222],"is_not":false,"summary":null,"term":"GO:0000128"},{"annotations":[103342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[103343,106051],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[105697,111172,108560,108437,113889,115952],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The reversible, non-sexual aggregation of single-celled organisms in suspension to form aggregates of many cells known as flocs.","definition_xrefs":["PMID:11472912","GOC:jl","PMID:21114594","PMID:8740415","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"is_a","term_name":"adhesion between unicellular organisms","termid":"GO:0098610"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null,"SJAG_04723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"flocculation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0043689","GO:0043690","GO:0032128","Wikipedia:Flocculation","GO:0000501","GO:0036281","GO:0036282"],"synonyms":[{"name":"cell-cell adhesion involved in flocculation","type":"exact"},{"name":"cell-cell adhesion involved in flocculation via cell wall protein-carbohydrate interaction","type":"narrow"},{"name":"co-flocculation","type":"narrow"},{"name":"coflocculation","type":"narrow"},{"name":"coflocculation via lectin-mannose interaction","type":"narrow"},{"name":"coflocculation via protein-carbohydrate interaction","type":"narrow"},{"name":"flocculation via cell wall protein-carbohydrate interaction","type":"related"},{"name":"flocculation via extracellular polymer","type":"related"}],"termid":"GO:0000128","terms_by_termid":{"GO:0000128":null,"GO:0036349":null,"GO:0060257":null,"GO:1900735":null}}


id: PR:Q9US25
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase hrp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.05","synonyms":[{"name":"ATP-dependent helicase hrp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hrp1","type":"exact"}],"termid":"PR:Q9US25"}


id: MONDO:0043358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A toxicity of hematopoietic stem cell transplantation that manifests as fever, rash and pulmonary deterioration which becomes evident at marrow engraftment. It occurs unexpectedly and is occasionally fatal. It can occur after an autogeneic or an allogeneic hematopoietic cell transplantation.","definition_xrefs":["NCIT:C63324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disease related to hematopoietic stem cell transplant","termid":"MONDO:0700222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engraftment syndrome","secondary_identifiers":["MEDGEN:214709","SCTID:426768001","UMLS:C0919746","GARD:11909"],"synonyms":[{"name":"engraftment syndrome","type":"exact"}],"termid":"MONDO:0043358","xrefs":{"Monarch":{"xref_id":"0043358"}}}


id: FYPO:0005209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore","synonyms":[{"name":"abnormal protein localisation to kinetochore","type":"exact"}],"termid":"FYPO:0005209"}


id: MONDO:0017813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebrofacioarticular syndrome is a rare multiple congenital anomalies syndrome characterized by mild to severe intellectual disability, a distinctive facial gestalt (blepharophimosis, maxillary hypoplasia, telecanthus, microtia and atresia of the external auditory meatus) as well as skeletal and articular abnormalities (e.g. camptodactyly of the fingers, cutaneous syndactyly, talipes equinovarus, flexion contractures of the proximal interphalangeal joints, hip or elbow subluxation, joint laxity). Affected individuals also present neonatal hypotonia, variable respiratory manifestations, chronic feeding difficulties and gray matter heterotopia.","definition_xrefs":["Orphanet:314679"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Maldergem syndrome","secondary_identifiers":["DOID:0060238","OMIMPS:601390","MEDGEN:318616","GARD:5456","UMLS:C1832390"],"synonyms":[{"name":"Van Maldergem Wetzburger Verloes syndrome","type":"related"},{"name":"Van Maldergem syndrome","type":"exact"},{"name":"cerebro-facio-articular syndrome","type":"exact"},{"name":"cerebro-facio-articular syndrome of Van Maldergem","type":"related"}],"termid":"MONDO:0017813","xrefs":{"Monarch":{"xref_id":"0017813"}}}


id: GO:0046938
data:
  {"annotated_genes":["SJAG_00988","SJAG_02599","SJAG_04516","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70509,93070,96787,108237],"is_not":false,"summary":null,"term":"GO:0046938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phytochelatin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cadystin biosynthetic process","type":"related"},{"name":"phytochelatin anabolism","type":"exact"},{"name":"phytochelatin biosynthesis","type":"exact"},{"name":"phytochelatin formation","type":"exact"},{"name":"phytochelatin synthesis","type":"exact"}],"termid":"GO:0046938","terms_by_termid":{"GO:0046938":null}}


