# terms

id: PR:Q09882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNW domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12096:SF0","OMA:SCHPO04706","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.11","secondary_identifiers":["UniProtKB:Q09882"],"synonyms":[{"name":"Spom972h-SNW1","type":"exact"},{"name":"complexed with cdc5 protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcriptional coregulator snw1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09882"}


id: PBO:0063586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 1","termid":"PBO:0063586"}


id: GO:0160027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multicellular organismal reproductive process that results in the movement of an egg from within an organism into the external environment.","definition_xrefs":["PMID:31164023","PMID:18050396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg deposition","termid":"GO:0160027"}


id: PATO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000149 relative temperature (obsolete PATO:0000149)","termid":"PATO:0000149"}


id: GO:0102987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: palmitoleoyl-CoA + O2 + a reduced electron acceptor = (9Z,12Z)-hexadecadienoyl-CoA + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoleic acid delta 12 desaturase activity (obsolete GO:0102987)","termid":"GO:0102987"}


id: PBO:0068054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 359","termid":"PBO:0068054"}


id: PBO:0062830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSMR divergent transcript","termid":"PBO:0062830"}


id: GO:0051695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of capping protein from the end of actin filaments to free the ends for addition, exchange or removal of further actin subunits.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament depolymerization","termid":"GO:0030836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin filament uncapping","synonyms":[{"name":"F-actin uncapping","type":"exact"}],"termid":"GO:0051695"}


id: MONDO:0013717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Jeune syndrome in which the cause of the disease is a mutation in the WDR19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"asphyxiating thoracic dystrophy 5","secondary_identifiers":["GARD:15795","MEDGEN:482228","DOID:0110089","OMIM:614376","UMLS:C3280598"],"synonyms":[{"name":"ATD5","type":"exact"},{"name":"Jeune syndrome caused by mutation in WDR19","type":"exact"},{"name":"SRTD5","type":"exact"},{"name":"WDR19 Jeune syndrome","type":"exact"},{"name":"asphyxiating thoracic dystrophy 5","type":"exact"},{"name":"asphyxiating thoracic dystrophy type 5","type":"exact"},{"name":"short-rib thoracic dysplasia 5 with or without polydactyly","type":"exact"}],"termid":"MONDO:0013717","xrefs":{"Monarch":{"xref_id":"0013717"}}}


id: GO:0071375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptide hormone stimulus","synonyms":[{"name":"cellular response to polypeptide hormone stimulus","type":"exact"}],"termid":"GO:0071375"}


id: PBO:0048471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell nuclear acidic peptidase","termid":"PBO:0048471"}


id: GO:0061582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an intestinal epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell migration","termid":"GO:0061582"}


id: PBO:0083559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene PMT1/YDL095W; YDL096C is not essential","termid":"PBO:0083559"}


id: PBO:0076293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin binding cytoplasmic RNA interacting protein","termid":"PBO:0076293"}


id: PBO:0030472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_separation","termid":"PBO:0030472"}


id: GO:0090400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress-induced premature senescence","synonyms":[{"name":"SIPS","type":"exact"}],"termid":"GO:0090400"}


id: MONDO:0007761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A laboratory test result indicating an autosomal dominant condition in which there is increased very low density lipoprotein production, which leads to increased triglyceride concentration.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperlipoproteinemia type IV (obsolete MONDO:0007761)","secondary_identifiers":["DOID:1172","SCTID:238085009","MESH:D006953","ICD9:272.1","SCTID:34528009","OMIM:144600","Orphanet:413"],"synonyms":[{"name":"Fredrickson type IV Lipidemia","type":"related"},{"name":"Fredrickson type IV hyperlipoproteinemia","type":"related"},{"name":"Fredrickson type IV lipidaemia","type":"related"},{"name":"VLDL hyperlipoproteinemia","type":"exact"},{"name":"carbohydrate inducible hyperlipemia","type":"related"},{"name":"carbohydrate-inducible hyperlipemia","type":"related"},{"name":"endogenous hyperlipidaemia","type":"exact"},{"name":"familial hypertriglyceridemia","type":"broad"},{"name":"familial type IV hyperlipoproteinemia","type":"related"},{"name":"hyperlipoproteinemia type 4","type":"related"},{"name":"hyperlipoproteinemia, type 4","type":"related"},{"name":"hyperlipoproteinemia, type IV","type":"related"}],"termid":"MONDO:0007761","xrefs":{"Monarch":{"xref_id":"0007761"}}}


id: MONDO:0004326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the ciliated respiratory mucosa that lines the sphenoid sinus. It results from the invagination and proliferation of epithelial cells in the underlying stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted papilloma","termid":"MONDO:0002537"},{"relation_name":"is_a","term_name":"sphenoid sinus Schneiderian papilloma","termid":"MONDO:0004327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoid sinus inverted papilloma","secondary_identifiers":["DOID:7678","UMLS:C1336037","MEDGEN:236834","NCIT:C6841"],"synonyms":[{"name":"inverted papilloma of sphenoid sinus","type":"exact"},{"name":"inverted papilloma of the sphenoid sinus","type":"exact"},{"name":"sphenoidal sinus inverted papilloma","type":"exact"}],"termid":"MONDO:0004326","xrefs":{"Monarch":{"xref_id":"0004326"}}}


id: MONDO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lagophthalmos","termid":"MONDO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"paralytic lagophthalmos","secondary_identifiers":["MEDGEN:509844","DOID:12958","HP:0030003","UMLS:C0155197","icd11.foundation:2122617367","ICD9:374.21"],"synonyms":[{"name":"paralytic lagophthalmos","type":"exact"},{"name":"paralytic lagophthalmos (disease)","type":"exact"}],"termid":"MONDO:0001603","xrefs":{"Monarch":{"xref_id":"0001603"}}}


id: GO:0055019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle fiber development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle fiber development","termid":"GO:0055018"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle fiber development","synonyms":[{"name":"down regulation of cardiac muscle fiber development","type":"exact"},{"name":"down-regulation of cardiac muscle fiber development","type":"exact"},{"name":"downregulation of cardiac muscle fiber development","type":"exact"},{"name":"inhibition of cardiac muscle fiber development","type":"narrow"},{"name":"negative regulation of cardiac muscle fibre development","type":"exact"},{"name":"negative regulation of heart muscle fiber development","type":"related"}],"termid":"GO:0055019"}


id: FYPO:0005114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to endosome","synonyms":[{"name":"normal protein localisation to endosome","type":"exact"},{"name":"normal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endosome during vegetative growth","type":"exact"},{"name":"normal protein targeting to endosome","type":"related"}],"termid":"FYPO:0005114"}


id: PBO:0029833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system","termid":"PBO:0029833"}


id: PR:000027543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P36631-1, Thr-173, MOD:00047|Ser-218, MOD:00046.","definition_xrefs":["PMID:11702950","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ste11/Phos(T173,S218)","pombase_gene_id":"SPBC32C12.02","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor ste11 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ste11/Phos:1","type":"exact"},{"name":"ste11/Phos(T173,S218)","type":"exact"}],"termid":"PR:000027543"}


id: GO:0048374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate determination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate determination","termid":"GO:0048373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate determination","synonyms":[{"name":"regulation of lateral mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048374"}


id: MOD:00578
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +28","synonyms":[{"name":"Acetaldehyde +28","type":"related"},{"name":"Delta:H(4)C(2)","type":"related"}],"termid":"MOD:00578"}


id: MONDO:0012154
data:
  {"annotated_genes":["SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85799],"is_not":false,"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"Any myopia in which the cause of the disease is a mutation in the SCO2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:608908","MEDGEN:324696","GARD:9937","MESH:C536105","UMLS:C1837148"],"synonyms":[{"name":"MYP6","type":"related"},{"name":"SCO2 myopia (disease)","type":"exact"},{"name":"myopia (disease) caused by mutation in SCO2","type":"exact"},{"name":"myopia 6","type":"exact"},{"name":"myopia type 6","type":"exact"},{"name":"myopia, susceptibility to","type":"related"}],"termid":"MONDO:0012154","terms_by_termid":{"MONDO:0012154":null},"xrefs":{"Monarch":{"xref_id":"0012154"}}}


id: MONDO:0957317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematuria, benign familial","secondary_identifiers":["MEDGEN:66039","Orphanet:97562","UMLS:C0241908","MESH:C562476","OMIMPS:141200","DOID:0111365"],"termid":"MONDO:0957317","xrefs":{"Monarch":{"xref_id":"0957317"}}}


id: PBO:0074566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 20","termid":"PBO:0074566"}


id: GO:0061345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via effectors other than beta-catenin and contributing to a cardioblast being committed to a cardiac muscle cell fate.","definition_xrefs":["GOC:dph","PMID:16860783","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"},{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway involved in heart development","termid":"GO:0061341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"planar cell polarity pathway involved in cardiac muscle cell fate commitment","termid":"GO:0061345"}


id: PBO:0070529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 28","termid":"PBO:0070529"}


id: GO:0048160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when a single layer of cuboidal follicle cells surrounds the oocyte. The oocyte nucleus is large.","definition_xrefs":["ISBN:0198542771","GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary follicle stage","synonyms":[{"name":"mammalian oogenesis stage 3","type":"exact"}],"termid":"GO:0048160"}


id: GO:0033745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + thioredoxin disulfide + H2O = L-methionine (R)-S-oxide + thioredoxin.","definition_xrefs":["EC:1.8.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-methionine-(R)-S-oxide reductase activity","secondary_identifiers":["RHEA:21260","MetaCyc:1.8.4.14-RXN"],"synonyms":[{"name":"FRMsr","type":"related"},{"name":"L-methionine:thioredoxin-disulfide S-oxidoreductase [L-methionine (R)-S-oxide-forming] activity","type":"related"},{"name":"free met-R-(o) reductase activity","type":"related"},{"name":"free-methionine (R)-S-oxide reductase activity","type":"related"},{"name":"methionine-R-sulfoxide reductase activity","type":"related"}],"termid":"GO:0033745"}


id: PBO:0065087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit beta 2","termid":"PBO:0065087"}


id: PBO:0011141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, inmplicated in translation (predicted)","termid":"PBO:0011141"}


id: MOD:00561
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:211","PubMed:12766232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d0","synonyms":[{"name":"N-ethyl iodoacetamide-d0","type":"related"},{"name":"NEIAA","type":"related"}],"termid":"MOD:00561"}


id: PBO:0017959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family Utp18 (predicted)","termid":"PBO:0017959"}


id: PBO:0035803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-ammonia_ligase_activity_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0035803"}


id: PBO:0076292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syncoilin, intermediate filament protein","termid":"PBO:0076292"}


id: GO:0017162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an aryl hydrocarbon receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"aryl hydrocarbon receptor binding","termid":"GO:0017162"}


id: PBO:0057591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 920","termid":"PBO:0057591"}


id: PBO:0088309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase","termid":"PBO:0088309"}


id: PBO:0113202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein; component of the interface between microtubules and the kinetochore; involved in sister chromatid separation and mitotic spindle elongation; involved in karyogamy during mating; stabilizes Kip2p at microtubule plus ends and recruits Kip2p to mitotic SPBs; essential in polyploid cells but not in haploid or diploid cells; promotes plus-end directed movement of Dyn1p; ortholog of mammalian CLIP-170","termid":"PBO:0113202"}


id: PBO:0059860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational initiation factor 3","termid":"PBO:0059860"}


id: PBO:0043434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 4","termid":"PBO:0043434"}


id: GO:0034790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (+)-(3S,4R)-cis-3,4-dihydroxy-3,4-dihydrofluorene = 3,4-dihydroxyfluorene + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,4-dihydroxy-3,4-dihydrofluorene dehydrogenase activity (obsolete GO:0034790)","termid":"GO:0034790"}


id: MONDO:0013213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss, cisplatin-induced, susceptibility to","secondary_identifiers":["MEDGEN:413752","OMIM:613290","UMLS:C2750088"],"synonyms":[{"name":"CIHL","type":"exact"},{"name":"hearing loss, cisplatin-induced, susceptibility to","type":"exact"}],"termid":"MONDO:0013213","xrefs":{"Monarch":{"xref_id":"0013213"}}}


id: PBO:0046955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 76 member B","termid":"PBO:0046955"}


id: GO:0045775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta 2 integrin biosynthetic process","termid":"GO:0045115"},{"relation_name":"is_a","term_name":"positive regulation of integrin biosynthetic process","termid":"GO:0045726"},{"relation_name":"positively_regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"activation of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of beta 2 integrin anabolism","type":"exact"},{"name":"positive regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"positive regulation of beta 2 integrin formation","type":"exact"},{"name":"positive regulation of beta 2 integrin synthesis","type":"exact"},{"name":"stimulation of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"up regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"up-regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"upregulation of beta 2 integrin biosynthetic process","type":"exact"}],"termid":"GO:0045775"}


id: PR:Q8TFH3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium transporter protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.11","secondary_identifiers":["UniProtKB:Q8TFH3"],"synonyms":[{"name":"Spom972h-MAGT1","type":"exact"},{"name":"oligosaccharyl transferase 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit OST3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH3"}


id: GO:0019176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroneopterin monophosphate = dihydroneopterin + phosphate.","definition_xrefs":["MetaCyc:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"dihydroneopterin monophosphate phosphatase activity","secondary_identifiers":["RHEA:25306"],"synonyms":[{"name":"dihydroneopterin monophosphate dephosphorylase activity","type":"exact"}],"termid":"GO:0019176"}


id: PR:O74438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.08c","synonyms":[{"name":"Spom972h-mcp2","type":"exact"}],"termid":"PR:O74438"}


id: GO:0047303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + oxaloacetate = L-aspartate + glyoxylate.","definition_xrefs":["RHEA:17141","EC:2.6.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"glycine-oxaloacetate transaminase activity","secondary_identifiers":["KEGG_REACTION:R00373","MetaCyc:2.6.1.35-RXN"],"synonyms":[{"name":"glycine--oxaloacetate aminotransferase activity","type":"related"},{"name":"glycine-oxalacetate aminotransferase activity","type":"related"},{"name":"glycine-oxaloacetate aminotransferase activity","type":"exact"},{"name":"glycine:oxaloacetate aminotransferase activity","type":"related"}],"termid":"GO:0047303"}


id: PBO:0031114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phenotype_during_exponential_phase","termid":"PBO:0031114"}


id: PBO:0011482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 lysine methyltransferase Clr4","termid":"PBO:0011482"}


id: PBO:0066629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA sensor RIG-I","termid":"PBO:0066629"}


id: GO:0031829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 4 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 4 receptor binding","type":"exact"},{"name":"type 4 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031829"}


id: MONDO:0014293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 2p21-p12.","definition_xrefs":["DOID:0110582","PMID:19159392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 58","secondary_identifiers":["GARD:18139","UMLS:C3888210","MEDGEN:854817","OMIM:615654"],"synonyms":[{"name":"DFNA58","type":"narrow"},{"name":"autosomal dominant deafness 58","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 58","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 58","type":"narrow"},{"name":"deafness, autosomal dominant 58","type":"narrow"}],"termid":"MONDO:0014293","xrefs":{"Monarch":{"xref_id":"0014293"}}}


id: PBO:0025465
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentosuria","termid":"PBO:0025465"}


id: PBO:0028798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest_at_rDNA_repeats","termid":"PBO:0028798"}


id: PBO:0091597
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly annotated as pex22","termid":"PBO:0091597"}


id: GO:0015824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"proline transport","synonyms":[{"name":"L-proline transport","type":"narrow"}],"termid":"GO:0015824"}


id: GO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excessive phosphorylation of a protein, as a result of activation of kinases, deactivation of phosphatases, or both.","definition_xrefs":["ISBN:039751820X","GOC:jid","PMID:12859672"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperphosphorylation (obsolete GO:0048151)","synonyms":[{"name":"hyperphosphorylation","type":"exact"}],"termid":"GO:0048151"}


id: PBO:0039985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6","termid":"PBO:0039985"}


id: PBO:0043895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 2","termid":"PBO:0043895"}


id: PBO:0048655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 4","termid":"PBO:0048655"}


id: PBO:0069622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 899, pseudogene","termid":"PBO:0069622"}


id: PBO:0046943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member E","termid":"PBO:0046943"}


id: MONDO:0003580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete embryonal testis carcinoma (obsolete MONDO:0003580)","termid":"MONDO:0003580","xrefs":{"Monarch":{"xref_id":"0003580"}}}


id: PBO:0087266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr kinase involved in transcription and stress response; functions as part of a network of genes in exit from mitosis; localization is cell cycle regulated; activated by Cdc15p during the exit from mitosis; also plays a role in regulating the stability of SWI5 and CLB2 mRNAs; phosphorylates Chs2p to regulate primary septum formation and Hof1p to regulate cytokinesis; DBF2 has a paralog, DBF20, that arose from the whole genome duplication","termid":"PBO:0087266"}


id: FYPO:0002214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with abnormal morphology (i.e. size, shape, or structure).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, abnormal germ tube morphology (obsolete FYPO:0002214)","synonyms":[{"name":"cell population inviable after spore germination, abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore population, abnormal germ tube morphology","type":"exact"},{"name":"inviable population of undivided germinated spores with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0002214"}


id: GO:0036500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum membrane stress sensor ATF6 (activating transcription factor 6). Begins with activation of ATF6 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. Under conditions of endoplasmic reticulum stress, ATF6 translocates to the Golgi where it is processed by proteases to release a cytoplasmic domain (ATF6f), which operates as a transcriptional activator of many genes required to restore folding capacity.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ATF6-mediated unfolded protein response","secondary_identifiers":["Reactome:R-HSA-381033"],"synonyms":[{"name":"ATF6 branch of UPR","type":"exact"},{"name":"ATF6 signal transduction pathway","type":"broad"},{"name":"ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"ATF6-alpha UPR branch","type":"narrow"},{"name":"ATF6-beta UPR branch","type":"narrow"},{"name":"UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:0036500"}


id: PBO:0069179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 433, pseudogene","termid":"PBO:0069179"}


id: PBO:0079522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYRO3P protein tyrosine kinase pseudogene","termid":"PBO:0079522"}


id: GO:0033337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal fin development","termid":"GO:0033337"}


id: FYPO:0002558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to medial cortex during vegetative growth","synonyms":[{"name":"normal protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"normal protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0002558"}


id: GO:0036215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stem cell factor","synonyms":[{"name":"response to KIT ligand","type":"exact"},{"name":"response to SCF","type":"exact"},{"name":"response to hematopoietic growth factor KL","type":"exact"},{"name":"response to stem cell factor stimulus","type":"exact"}],"termid":"GO:0036215"}


id: FYPO:0001074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of myo-inositol into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal myo-inositol import","termid":"FYPO:0001073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased myo-inositol import","synonyms":[{"name":"decreased myo-inositol import across plasma membrane","type":"exact"},{"name":"decreased myo-inositol import during mitotic cell cycle","type":"related"},{"name":"decreased myo-inositol import during vegetative growth","type":"exact"},{"name":"decreased myo-inositol import into cell","type":"exact"},{"name":"decreased myo-inositol uptake","type":"exact"},{"name":"reduced myo-inositol import","type":"exact"}],"termid":"FYPO:0001074"}


id: MONDO:0017805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intellectual disability-hypotonia-brachycephaly-pyloric stenosis-cryptorchidism syndrome","secondary_identifiers":["MEDGEN:1655593","Orphanet:314575","UMLS:C4751073","GARD:21379"],"termid":"MONDO:0017805","xrefs":{"Monarch":{"xref_id":"0017805"}}}


id: GO:0120223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the larynx is generated and organized. The larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration.","definition_xrefs":["PMID:28177282","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"larynx development","termid":"GO:0120224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larynx morphogenesis","synonyms":[{"name":"laryngeal morphogenesis","type":"exact"}],"termid":"GO:0120223"}


id: GO:1904419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric loop formation.","definition_xrefs":["GO_REF:0000058","GOC:nc","PMID:22579284","GOC:BHF","GOC:TermGenie","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomeric loop formation","termid":"GO:1904418"},{"relation_name":"negatively_regulates","term_name":"telomeric loop formation","termid":"GO:0031627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomeric loop formation","synonyms":[{"name":"down regulation of t-loop biosynthesis","type":"exact"},{"name":"down regulation of t-loop formation","type":"exact"},{"name":"down regulation of telomeric loop formation","type":"exact"},{"name":"down-regulation of t-loop biosynthesis","type":"exact"},{"name":"down-regulation of t-loop formation","type":"exact"},{"name":"down-regulation of telomeric loop formation","type":"exact"},{"name":"downregulation of t-loop biosynthesis","type":"exact"},{"name":"downregulation of t-loop formation","type":"exact"},{"name":"downregulation of telomeric loop formation","type":"exact"},{"name":"inhibition of t-loop biosynthesis","type":"narrow"},{"name":"inhibition of t-loop formation","type":"narrow"},{"name":"inhibition of telomeric loop formation","type":"narrow"},{"name":"negative regulation of t-loop biosynthesis","type":"exact"},{"name":"negative regulation of t-loop formation","type":"exact"}],"termid":"GO:1904419"}


id: MONDO:0957202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 7","secondary_identifiers":["UMLS:C5829567","DOID:0070598","MEDGEN:1840203","OMIM:301106"],"termid":"MONDO:0957202","xrefs":{"Monarch":{"xref_id":"0957202"}}}


id: GO:0016887
data:
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id: MONDO:0000139
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id: GO:0045687
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id: MONDO:0054731
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id: GO:0140081
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycosylated region of a protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"glycosylated region protein binding","termid":"GO:0140081"}


id: GO:0031009
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id: PBO:0005731
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type zinc finger protein","termid":"PBO:0005731"}


id: PBO:0087419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 8 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; oriented facing the intermembrane space; expression is regulated by Abf1p and Cpf1p","termid":"PBO:0087419"}


id: RO:0002385
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id: GO:0072086
data:
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id: MONDO:0002263
data:
  {"annotated_genes":["SJAG_02748","SJAG_02339","SJAG_01419","SJAG_03720","SJAG_01156","SJAG_04114","SJAG_04738","SJAG_03418","SJAG_02690","SJAG_00103","SJAG_03051","SJAG_03698","SJAG_04950","SJAG_02954","SJAG_02294","SJAG_04703","SJAG_00377","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[85718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87016,84799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[86877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[86953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[85763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86169,86170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[85464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[85866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[86761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86355,86354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"A disease involving the female reproductive system.","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_01156":null,"SJAG_01419":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02748":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"female reproductive system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0236100","EFO:0009549","DOID:229","NCIT:C27020","MEDGEN:65928","SCTID:310789003","ICD9:629.9","MESH:D005831"],"synonyms":[{"name":"disease of female genital system","type":"related"},{"name":"disease of female reproductive system","type":"exact"},{"name":"disease or disorder of female reproductive system","type":"exact"},{"name":"disorder of female genital system","type":"exact"},{"name":"disorder of female genital tract","type":"related"},{"name":"disorder of female reproductive system","type":"exact"},{"name":"female reproductive disease","type":"exact"},{"name":"female reproductive system disease","type":"exact"},{"name":"female reproductive system disease or disorder","type":"exact"},{"name":"female reproductive system disorder","type":"exact"},{"name":"gynaecological disease","type":"related"},{"name":"gynecological disease","type":"related"}],"termid":"MONDO:0002263","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0011962":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0032747":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0002263"}}}


id: PBO:0055753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA neighboring enhancer of FOXA2","termid":"PBO:0055753"}


id: GO:0051109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + crotono-betaine + ATP = AMP + diphosphate + crotonobetainyl-CoA.","definition_xrefs":["MetaCyc:CROTCOALIG-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"crotonobetaine-CoA ligase activity","secondary_identifiers":["RHEA:30079"],"synonyms":[{"name":"crotonobetaine-CoA synthase activity","type":"exact"},{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"broad"}],"termid":"GO:0051109"}


id: MONDO:0002394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Leydig cell tumor (obsolete MONDO:0002394)","termid":"MONDO:0002394","xrefs":{"Monarch":{"xref_id":"0002394"}}}


id: PR:Q1MTP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iss9 gene.","definition_xrefs":["UniProtKB:Q1MTP1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THP3 homolog C2A9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.11c","synonyms":[{"name":"Spom972h-iss9","type":"exact"}],"termid":"PR:Q1MTP1"}


id: GO:2000086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:2000084"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"positive regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000086"}


id: MONDO:0010674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease leading to a massive accumulation of glycosaminoglycans and a wide variety of symptoms including distinctive coarse facial features, short stature, cardio-respiratory involvement and skeletal abnormalities. It manifests as a continuum varying from a severe to an attenuated form without neuronal involvement.","definition_xrefs":["Orphanet:580"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic neurometabolic disease with X-linked intellectual disability (obsolete MONDO:0015920)","termid":"MONDO:0015920"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lysosomal disease with hypertrophic cardiomyopathy (obsolete MONDO:0016326)","termid":"MONDO:0016326"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disease with skin involvement (obsolete MONDO:0019301)","termid":"MONDO:0019301"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lysosomal storage disease with skeletal involvement (obsolete MONDO:0019706)","termid":"MONDO:0019706"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyelids malposition disorder (obsolete MONDO:0020158)","termid":"MONDO:0020158"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0037792"],"is_obsolete":false,"name":"mucopolysaccharidosis type 2","secondary_identifiers":["MESH:D016532","SCTID:70737009","MEDGEN:7734","MedDRA:10056889","GARD:6675","DOID:12799","NCIT:C61260","Orphanet:79388","ICD10CM:E76.1","NANDO:2200548","UMLS:C0026705","NORD:1255","icd11.foundation:1056274204","NANDO:1200097","OMIM:309900"],"synonyms":[{"name":"Hunter syndrome","type":"exact"},{"name":"Hunter's syndrome","type":"exact"},{"name":"I2S deficiency","type":"exact"},{"name":"IDS deficiency","type":"exact"},{"name":"MPS 2","type":"exact"},{"name":"MPS II","type":"exact"},{"name":"MPS II - Hunter syndrome","type":"exact"},{"name":"MPS with skin involvement","type":"exact"},{"name":"MPS2","type":"exact"},{"name":"MPSII","type":"exact"},{"name":"Mucopolysaccharidosis Type II","type":"exact"},{"name":"SIDS deficiency","type":"exact"},{"name":"attenuated MPS (subtype; formerly known as mild MPS II)","type":"exact"},{"name":"deficiency of iduronate-2-sulphatase","type":"exact"},{"name":"iduronate 2-sulfatase deficiency","type":"exact"},{"name":"mucopolysaccharidosis II","type":"exact"},{"name":"mucopolysaccharidosis II, X-linked recessive","type":"exact"},{"name":"mucopolysaccharidosis type 2","type":"exact"},{"name":"mucopolysaccharidosis type II","type":"exact"},{"name":"mucopolysaccharidosis with skin involvement","type":"exact"},{"name":"mucopolysaccharidosis, MPS-II","type":"exact"},{"name":"mucopolysaccharidosis, type 2","type":"exact"},{"name":"mucopolysaccharidosis, type II","type":"exact"},{"name":"severe MPS II","type":"exact"},{"name":"sulfoiduronate sulfatase deficiency","type":"exact"}],"termid":"MONDO:0010674","xrefs":{"Monarch":{"xref_id":"0010674"}}}


id: GO:0042755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue.","definition_xrefs":["PMID:19361967","GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eating behavior","synonyms":[{"name":"eating behaviour","type":"exact"}],"termid":"GO:0042755"}


id: PBO:0035841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosomal_S6_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0035841"}


id: PBO:0058922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7b","termid":"PBO:0058922"}


id: GO:0043958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propanoyl-CoA + NAD+ = acryloyl-CoA + H+ + NADH.","definition_xrefs":["GOC:jl","PMID:12603323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acryloyl-CoA reductase (NADH) activity","secondary_identifiers":["RHEA:34471","MetaCyc:RXN-8568","EC:1.3.1.95"],"synonyms":[{"name":"acryloyl-CoA reductase activity","type":"broad"},{"name":"acryloyl-coenzyme A reductase activity","type":"broad"},{"name":"acrylyl-CoA reductase (NADH)","type":"exact"},{"name":"propionyl-CoA dehydrogenase","type":"broad"}],"termid":"GO:0043958"}


id: GO:0008688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(3-hydroxyphenyl)propionate + NADH + oxygen + H+ = 3-(2,3-dihydroxyphenyl)propionate + NAD+ + H2O.","definition_xrefs":["RHEA:24785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propionate hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06786","EC:1.14.13.127","MetaCyc:MHPHYDROXY-RXN"],"termid":"GO:0008688"}


id: FYPO:0006695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-methionine (SAM) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-methionine level during vegetative growth","synonyms":[{"name":"decreased S-adenosyl-L-methionine accumulation during vegetative growth","type":"related"},{"name":"decreased cellular S-adenosyl-L-methionine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosylmethionine level during vegetative growth","type":"exact"},{"name":"decreased cellular SAM level during vegetative growth","type":"exact"},{"name":"reduced cellular S-adenosyl-L-methionine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006695"}


id: PBO:0050653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 3, pseudogene","termid":"PBO:0050653"}


id: PBO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in REreplication","termid":"PBO:0000353"}


id: PBO:0042674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 8","termid":"PBO:0042674"}


id: PBO:0017423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-located_in","termid":"PBO:0017423"}


id: PBO:0031135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_osmotic_stress","termid":"PBO:0031135"}


id: GO:0019732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against a fungus mediated through a body fluid. An example of this process is the antifungal humoral response in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal humoral response","secondary_identifiers":["GO:0006966","GO:0019734"],"termid":"GO:0019732"}


id: PBO:0039470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD17 divergent transcript","termid":"PBO:0039470"}


id: PR:O42925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16C6.01c gene.","definition_xrefs":["UniProtKB:O42925","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.01c","synonyms":[{"name":"Spom972h-SPBC16C6.01c","type":"exact"}],"termid":"PR:O42925"}


id: PBO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (predicted)","termid":"PBO:0001076"}


id: GO:0020031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense ring at the most anterior position of the apical complex, from which the conoid fibers originate; formed during an invasive life cycle stage of an apicomplexan parasite.","definition_xrefs":["PMID:16518471","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polar ring of apical complex","synonyms":[{"name":"anterior polar ring of apical complex","type":"exact"},{"name":"upper polar ring of apical complex","type":"exact"}],"termid":"GO:0020031"}


id: PBO:0003841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II","termid":"PBO:0003841"}


id: GO:0016109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tetraterpenoid biosynthetic process","synonyms":[{"name":"tetraterpene biosynthesis","type":"narrow"},{"name":"tetraterpene biosynthetic process","type":"narrow"},{"name":"tetraterpenoid anabolism","type":"exact"},{"name":"tetraterpenoid biosynthesis","type":"exact"},{"name":"tetraterpenoid formation","type":"exact"},{"name":"tetraterpenoid synthesis","type":"exact"}],"termid":"GO:0016109"}


id: PBO:0088459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER phosphatidate cytidylyltransferase Bbl1","termid":"PBO:0088459"}


id: GO:0033755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 sulfur + 4 H2O + O2 = 2 hydrogen sulfide + 2 bisulfite + 2 H+.","definition_xrefs":["EC:1.13.11.55","PMID:1522063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfur oxygenase/reductase activity","secondary_identifiers":["RHEA:13957","MetaCyc:1.13.11.55-RXN"],"synonyms":[{"name":"SOR","type":"related"},{"name":"sulfur oxygenase activity","type":"broad"},{"name":"sulfur:oxygen oxidoreductase (hydrogen-sulfide- and sulfite-forming) activity","type":"related"},{"name":"sulphur oxygenase/reductase activity","type":"exact"}],"termid":"GO:0033755"}


id: GO:0009831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that occur during cell growth that result in chemical or structural changes to existing cell walls of the type composed chiefly of cellulose and pectin. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cell wall modification involved in multidimensional cell growth","termid":"GO:0042547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall modification involved in multidimensional cell growth","synonyms":[{"name":"cell wall modification during cell expansion","type":"broad"},{"name":"cellulose and pectin-containing cell wall modification during multidimensional cell growth","type":"related"}],"termid":"GO:0009831"}


id: PR:O14053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13889:SF2","PRO:DNx","OMA:SCHPO04369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 21 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.07","secondary_identifiers":["UniProtKB:O14053"],"synonyms":[{"name":"Spom972h-WDR36","type":"exact"},{"name":"U3 snoRNA-associated protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14053"}


id: PBO:0084087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for the GTPase Gtr1p; subunit of the HOPS endocytic tethering complex; vacuole membrane protein; functions as a Rab GTPase effector, interacting with both GTP- and GDP-bound conformations of Ypt7p; facilitates tethering and promotes membrane fusion events at the late endosome and vacuole; required for both membrane and protein trafficking; component of vacuole-mitochondrion contacts (vCLAMPs) important for lipid transfer between organelles","termid":"PBO:0084087"}


id: PBO:0055911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 2","termid":"PBO:0055911"}


id: PBO:0047863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(p24.2)","termid":"PBO:0047863"}


id: PBO:0111828
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPR repeats","termid":"PBO:0111828"}


id: MOD:01334
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 6x(13)C labeled L-lysine.","definition_xrefs":["OMSSA:138","PubMed:11857757","Unimod:188#K","PubMed:12716131","PubMed:12175151","PubMed:11999733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-lysine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"},{"name":"lys-13c6","type":"exact"}],"termid":"MOD:01334"}


id: PBO:0004559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc3 (predicted)","termid":"PBO:0004559"}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: FYPO:0002194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a larger volume than normal and spheroid shape, and contain one or more septa each. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen septated spheroid cells (obsolete FYPO:0002194)","synonyms":[{"name":"inviable microcolony, enlarged septated spheroid vegetative cells","type":"related"},{"name":"inviable microcolony, septated large spheroid vegetative cells","type":"related"},{"name":"inviable microcolony, septated, spheroid vegetative cells with increased cell size","type":"related"},{"name":"inviable microcolony, septated, spheroid vegetative cells with increased cell volume","type":"exact"},{"name":"inviable microcolony, swollen septated rounded cells","type":"exact"},{"name":"inviable microcolony, swollen septated spheroid vegetative cells","type":"exact"}],"termid":"FYPO:0002194"}


id: MONDO:0021131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymal tumor affecting the frontal lobe of the brain.","definition_xrefs":["NCIT:C131573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe neoplasm","termid":"MONDO:0001421"},{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"frontal lobe ependymal tumor","secondary_identifiers":["UMLS:C4330009","MEDGEN:1391114"],"synonyms":[{"name":"ependymal tumor of frontal lobe","type":"exact"},{"name":"ependymal tumour of frontal lobe","type":"exact"},{"name":"frontal lobe ependymal tumor","type":"exact"}],"termid":"MONDO:0021131","xrefs":{"Monarch":{"xref_id":"0021131"}}}


id: PR:Q9UT66
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4F11.05 gene.","definition_xrefs":["UniProtKB:Q9UT66","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.05","synonyms":[{"name":"Spom972h-SPCC4F11.05","type":"exact"}],"termid":"PR:Q9UT66"}


id: PBO:0044748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 27","termid":"PBO:0044748"}


id: FYPO:0004712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more nucleotide metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Nucleotide metabolism RNAs are transcribed from genes whose products are involved in any nucleotide metabolic process.","definition_xrefs":["PomBase:mah","PMID:18203864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of nucleotide metabolism gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of nucleotide metabolism gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of nucleotide metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of nucleotide metabolism gene transcripts during vegetative growth","type":"exact"},{"name":"decreased nucleotide metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of nucleotide metabolism gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004712"}


id: GO:1903742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["PMID:25329901","GOC:kmv","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"}


id: PBO:0080058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 28","termid":"PBO:0080058"}


id: PBO:0028864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pre-mRNA_level","termid":"PBO:0028864"}


id: GO:1904107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a microvillus membrane.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:25335890","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to microvillus","termid":"GO:1904106"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microvillus membrane","synonyms":[{"name":"protein localisation in microvillus membrane","type":"exact"},{"name":"protein localisation to microvillus membrane","type":"exact"},{"name":"protein localization in microvillus membrane","type":"exact"}],"termid":"GO:1904107"}


id: MONDO:0017148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heritable pulmonary arterial hypertension (HPAH) is a form of pulmonary arterial hypertension (PAH), occurring due to mutations in PAH predisposing genes or in a familial context. HPAH is characterized by elevated pulmonary arterial resistance leading to right heart failure. HPAH is progressive and potentially fatal.","definition_xrefs":["Orphanet:275777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heritable pulmonary arterial hypertension","secondary_identifiers":["MEDGEN:90953","NANDO:2201047","OMIMPS:178600","NCIT:C121945","SCTID:697897003","UMLS:C0340543","GARD:11914"],"synonyms":[{"name":"FPAH","type":"exact"},{"name":"HPAH","type":"exact"},{"name":"HpaH","type":"exact"},{"name":"familial pulmonary arterial hypertension","type":"exact"},{"name":"hereditary pulmonary arterial hypertension","type":"exact"}],"termid":"MONDO:0017148","xrefs":{"Monarch":{"xref_id":"0017148"}}}


id: PBO:0072057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 27","termid":"PBO:0072057"}


id: SO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Arrangement of the polypeptide with respect to the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_structure","secondary_identifiers":["BS:00128"],"synonyms":[{"name":"membrane structure","type":"exact"}],"termid":"SO:0001071"}


id: GO:0000032
data:
  {"annotated_genes":["SJAG_00598","SJAG_03082","SJAG_04906","SJAG_01264","SJAG_02519","SJAG_04770","SJAG_00816","SJAG_01021","SJAG_01276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71574,74278,74503,76573,77337,77884,79167,80153,87249],"is_not":false,"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cell wall mannoproteins, any cell wall protein that contains covalently bound mannose residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannoprotein biosynthetic process","termid":"GO:0006057"},{"relation_name":"is_a","term_name":"cell wall glycoprotein biosynthetic process","termid":"GO:0031506"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall mannoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall mannoprotein anabolism","type":"exact"},{"name":"cell wall mannoprotein biosynthesis","type":"exact"},{"name":"cell wall mannoprotein formation","type":"exact"},{"name":"cell wall mannoprotein synthesis","type":"exact"}],"termid":"GO:0000032","terms_by_termid":{"GO:0000032":null}}


id: PR:Q9UTE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MAK16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00377","PANTHER:PTHR23405:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mak16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.06","secondary_identifiers":["UniProtKB:Q9UTE6"],"synonyms":[{"name":"Spom972h-MAK16","type":"exact"}],"termid":"PR:Q9UTE6"}


id: MONDO:0018378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An area of necrotic bone in the mandible or maxilla.","definition_xrefs":["NCIT:C63924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary avascular necrosis","termid":"MONDO:0018374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteonecrosis of the jaw","secondary_identifiers":["GARD:21663","ICD9:733.45","Orphanet:399293","SCTID:441809006","MEDGEN:751019","UMLS:C2711248"],"synonyms":[{"name":"ONJ","type":"exact"},{"name":"jaw osteonecrosis","type":"exact"},{"name":"osteonecrosis of jaw","type":"exact"}],"termid":"MONDO:0018378","xrefs":{"Monarch":{"xref_id":"0018378"}}}


id: PBO:0028589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intermittent_monopolar_cell_growth","termid":"PBO:0028589"}


id: GO:0047120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD+ = 3,4-dihydroxybenzoate + CO2 + NADH.","definition_xrefs":["RHEA:10744","EC:1.3.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01633","GO:0018514","MetaCyc:1.3.1.53-RXN","UM-BBD_reactionID:r0151"],"synonyms":[{"name":"(1R,2S)-dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylate dehydrogenase activity","type":"related"},{"name":"(3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate:NAD+ oxidoreductase activity","type":"related"},{"name":"cis-4,5-dihydroxycyclohexa-1(6),2-diene-1,4-dicarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylate dehydrogenase activity","type":"related"},{"name":"terephthalate 1,2-cis-dihydrodiol dehydrogenase activity","type":"exact"}],"termid":"GO:0047120"}


id: PR:O60064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mannose-1-phosphate guanyltransferase alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22572:SF15","OMA:SCHPO03828","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.02","secondary_identifiers":["UniProtKB:O60064"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"GTP-mannose-1-phosphate guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"Spom972h-GMPPA","type":"exact"}],"termid":"PR:O60064"}


id: PBO:0110357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 1","termid":"PBO:0110357"}


id: PBO:0087811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetradecameric mitochondrial chaperonin; required for ATP-dependent folding of precursor polypeptides and complex assembly; prevents aggregation and mediates protein refolding after heat shock; role in mtDNA transmission; phosphorylated","termid":"PBO:0087811"}


id: GO:0099167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099167)","termid":"GO:0099167"}


id: PBO:0052381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 23","termid":"PBO:0052381"}


id: GO:0070325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipoprotein particle receptor.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lipoprotein particle receptor binding","termid":"GO:0070325"}


id: MONDO:0015338
data:
  {"annotated_genes":["SJAG_02165","SJAG_04270","SJAG_04995","SJAG_03249","SJAG_02200"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[84840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[85189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[85296,85295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009039"},{"annotations":[86368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013740"}]},"cv_name":"mondo","definition":"A craniosynostosis that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02200":null,"SJAG_03249":null,"SJAG_04270":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"syndromic craniosynostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:139393","GARD:19911","UMLS:C5680624","MEDGEN:1842203"],"synonyms":[{"name":"syndrome associated with craniosynostosis","type":"exact"},{"name":"syndromic craniosynostosis","type":"exact"}],"termid":"MONDO:0015338","terms_by_termid":{"MONDO:0008726":null,"MONDO:0009039":null,"MONDO:0013740":null,"MONDO:0014558":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0015338"}}}


id: PBO:0062817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSBPL10 antisense RNA 1","termid":"PBO:0062817"}


id: MONDO:0008292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Punctate palmoplantar keratoderma type 2 is a type of isolated, punctate, hereditary palmoplantar keratoderma characterized by multiple, asymptomatic, 1 to 2 mm-long, firm, hyperkeratotic projections (\\\"spiny keratosis\\\") on the palms, soles and digits (typically confined to their volar and/or lateral aspects). Histopathologically, compact columnar parakeratosis over hypo- or agranular epidermis is observed.","definition_xrefs":["Orphanet:79502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma type 2","secondary_identifiers":["MEDGEN:356886","OMIM:175860","SCTID:765096001","UMLS:C1867982","GARD:4439","DOID:0080213"],"synonyms":[{"name":"PPKP2","type":"exact"},{"name":"PPPP","type":"exact"},{"name":"keratoderma palmoplantar, punctate type 2","type":"related"},{"name":"palmoplantar keratoderma, punctate type II","type":"related"},{"name":"porokeratosis punctata palmaris Et plantaris","type":"related"},{"name":"punctate palmoplantar hyperkeratosis type 2","type":"exact"},{"name":"punctate palmoplantar keratoderma type II","type":"related"},{"name":"type 2 punctate PPK","type":"related"}],"termid":"MONDO:0008292","xrefs":{"Monarch":{"xref_id":"0008292"}}}


id: PBO:0091208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His","termid":"PBO:0091208"}


id: PBO:0057923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3648-2","termid":"PBO:0057923"}


id: PBO:0082215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 4 subunit of the 20S proteasome; may replace alpha 3 subunit (Pre9p) under stress conditions to create a more active proteasomal isoform; GFP-fusion protein relocates from cytosol to the mitochondrial surface upon oxidative stress","termid":"PBO:0082215"}


id: PBO:0062694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 5","termid":"PBO:0062694"}


id: PR:Q9USH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucosidase 2 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04545","PANTHER:PTHR12630:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase 2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.02","secondary_identifiers":["UniProtKB:Q9USH8"],"synonyms":[{"name":"Spom972h-PRKCSH","type":"exact"},{"name":"alpha-glucosidase 2 subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH8"}


id: PBO:0044687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartate oxidase","termid":"PBO:0044687"}


id: PBO:0086674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF is contained within RDN25-2 and RDN37-2","termid":"PBO:0086674"}


id: PBO:0017468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-formed_as_result_of","termid":"PBO:0017468"}


id: PBO:0052338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KICSTOR subunit 2","termid":"PBO:0052338"}


id: GO:1901798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of signal transduction by p53 class mediator","synonyms":[{"name":"activation of signal transduction by p53 class mediator","type":"narrow"},{"name":"up regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"up-regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"upregulation of signal transduction by p53 class mediator","type":"exact"}],"termid":"GO:1901798"}


id: PBO:0078416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-2","termid":"PBO:0078416"}


id: FYPO:0000850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to a stress. Typically, a cell population is deemed resistant to a stress if cells in the population grow and divide when exposed to the stress at an intensity at which wild-type cells stop growing (and may die).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to stress during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"resistance to stress during mitotic cell cycle","type":"related"},{"name":"resistant to stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000850"}


id: MONDO:0017855
data:
  {"annotated_genes":["SJAG_02527","SJAG_02038","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[86822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011686"},{"annotations":[85403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"}]},"cv_name":"mondo","definition":"T-B- severe combined immunodeficiency (SCID) is a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T and B lymphocytes, resulting in recurrent early-onset severe respiratory viral, bacterial or fungal infections, diarrhea and failure to thrive. Hypersensitivity to ionizing radiation is a characteristic feature of some of its sub-types.","definition_xrefs":["Orphanet:317419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02038":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B- severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5679893","GARD:21406","MEDGEN:1842252"],"synonyms":[{"name":"T-B- SCID","type":"exact"}],"termid":"MONDO:0017855","terms_by_termid":{"MONDO:0009973":null,"MONDO:0011686":null,"MONDO:0012650":null},"xrefs":{"Monarch":{"xref_id":"0017855"}}}


id: MONDO:0016919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 21","secondary_identifiers":["GARD:20840","Orphanet:262173","MEDGEN:1825976","UMLS:C5679731"],"synonyms":[{"name":"partial deletion of chromosome 21q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 21","type":"exact"},{"name":"partial monosomy of chromosome 21q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 21","type":"exact"}],"termid":"MONDO:0016919","xrefs":{"Monarch":{"xref_id":"0016919"}}}


id: GO:0060006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vestibular reflex by which a response to an angular acceleration stimulus begins with an afferent nerve impulse from a receptor in the semi-circular canal and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["PMID:11784757","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular reflex","termid":"GO:0060005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angular vestibuloocular reflex","termid":"GO:0060006"}


id: PBO:0056468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST4 antisense RNA 1","termid":"PBO:0056468"}


id: MONDO:0024558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome in which the cause of the disease is a mutation in the HOXA11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome","termid":"MONDO:0011555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005570"],"is_obsolete":false,"name":"radioulnar synostosis with amegakaryocytic thrombocytopenia 1","secondary_identifiers":["OMIM:605432","GARD:18068","MEDGEN:1637913","UMLS:C4551975"],"synonyms":[{"name":"HOXA11 radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome","type":"exact"},{"name":"RUSAT1","type":"related"},{"name":"Rusat","type":"related"},{"name":"radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome caused by mutation in HOXA11","type":"exact"},{"name":"radioulnar synostosis with amegakaryocytic thrombocytopenia 1","type":"exact"},{"name":"thrombocytopenia, congenital, with radioulnar synostosis","type":"related"}],"termid":"MONDO:0024558","xrefs":{"Monarch":{"xref_id":"0024558"}}}


id: GO:1902725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of satellite cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:23212449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle cell differentiation","termid":"GO:2001015"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle satellite cell differentiation","termid":"GO:0014816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of satellite cell differentiation","synonyms":[{"name":"down regulation of satellite cell differentiation","type":"exact"},{"name":"down-regulation of satellite cell differentiation","type":"exact"},{"name":"downregulation of satellite cell differentiation","type":"exact"},{"name":"inhibition of satellite cell differentiation","type":"narrow"}],"termid":"GO:1902725"}


id: PBO:0084209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeodomain-containing transcriptional repressor; regulates expression of PTR2, which encodes a major peptide transporter; imported peptides activate ubiquitin-dependent proteolysis, resulting in degradation of Cup9p and de-repression of PTR2 transcription; CUP9 has a paralog, TOS8, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084209"}


id: GO:1904759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an equatorial microtubule organizing center.","definition_xrefs":["PMID:16611237","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to equatorial microtubule organizing center","synonyms":[{"name":"protein localisation in equatorial microtubule organizing center","type":"exact"},{"name":"protein localisation to equatorial microtubule organizing center","type":"exact"},{"name":"protein localization in equatorial microtubule organizing center","type":"exact"},{"name":"protein localization to eMTOC","type":"exact"}],"termid":"GO:1904759"}


id: MONDO:0021670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-infectious syndrome","termid":"MONDO:0021670","xrefs":{"Monarch":{"xref_id":"0021670"}}}


id: PBO:0108834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase activating complex subunit Npr2","termid":"PBO:0108834"}


id: PBO:0046340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase family member 5","termid":"PBO:0046340"}


id: MONDO:0010174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Valinemia is a very rare metabolic disorder characterized by abnormally high levels of the amino acid valine in the blood and urine.Infants with valinemia reportedly experience lack of appetite, vomiting, and failure to thrive. In some cases, the condition may be life-threatening. Low muscle tone (hypotonia), excessive drowsiness, hyperactivity, and developmental delay have also been reported. Valinemia is caused by a deficiency of the enzymevaline transaminase, which is needed for the breakdown (metabolism) of valine in the body. It is inherited in an autosomal recessive manner, although the gene responsible for the condition is not yet known. Treatment includes adiet low in valine (introduced during early infancy) which usually improves symptoms and brings valine levels to normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Valinemia","secondary_identifiers":["MESH:C536524","SCTID:47719001","OMIM:277100","MEDGEN:120652","UMLS:C0268573"],"synonyms":[{"name":"Valinemia","type":"exact"},{"name":"hypervalinemia","type":"related"},{"name":"valine transaminase deficiency","type":"related"}],"termid":"MONDO:0010174","xrefs":{"Monarch":{"xref_id":"0010174"}}}


id: MONDO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cutaneous lesion presenting as a scaly verrucous plaque. Morphologically, the plaque contains nests of basaloid cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"Borst-Jadassohn intraepidermal carcinoma","secondary_identifiers":["SCTID:403886007","UMLS:C2937231","ICDO:8096/0","DOID:7039","NCIT:C4110","MEDGEN:424845"],"synonyms":[{"name":"Bowen's disease, clonal","type":"exact"},{"name":"intraepidermal epithelioma of Jadassohn","type":"exact"}],"termid":"MONDO:0004083","xrefs":{"Monarch":{"xref_id":"0004083"}}}


id: GO:0045130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + keratan = adenosine 3',5'-bisphosphate + keratan 6'-sulfate.","definition_xrefs":["EC:2.8.2.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan sulfotransferase activity","termid":"GO:0050698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"keratan sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2046175","MetaCyc:KERATAN-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl keratan sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:keratan 6'-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate:keratan sulfotransferase activity","type":"related"},{"name":"keratan sulfate Gal-6-sulfotransferase activity","type":"exact"},{"name":"keratan sulfate sulfotransferase activity","type":"related"},{"name":"keratan sulphotransferase activity","type":"exact"}],"termid":"GO:0045130"}


id: GO:0043903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiosis, an interaction between two organisms living together in more or less intimate association.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of biological process involved in symbiotic interaction","synonyms":[{"name":"regulation of interspecies interactions between organisms","type":"broad"},{"name":"regulation of symbiosis, encompassing mutualism through parasitism","type":"related"},{"name":"regulation of symbiotic process","type":"exact"}],"termid":"GO:0043903"}


id: GO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The site on the mitochondrial membrane where the separation of a single continuous mitochondrial membrane into two membranes occurs as a final step in mitochondrial fission.","definition_xrefs":["PMID:26618722","GOC:PARL","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial membrane scission site","termid":"GO:0090692"}


id: GO:0005942
data:
  {"annotated_genes":["SJAG_04860","SJAG_02699","SJAG_03403","SJAG_04552","SJAG_01876","SJAG_00114"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71157,94384,76969,76385,111314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034271"},{"annotations":[76386,105513,71158,76970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"A protein complex capable of phosphatidylinositol 3-kinase activity and containing subunits of any phosphatidylinositol 3-kinase (PI3K) enzyme. These complexes are divided in three classes (called I, II and III) that differ for their presence across taxonomic groups and for the type of their constituents. Catalytic subunits of phosphatidylinositol 3-kinase enzymes are present in all 3 classes; regulatory subunits of phosphatidylinositol 3-kinase enzymes are present in classes I and III; adaptor proteins have been observed in class II complexes and may be present in other classes too.","definition_xrefs":["GOC:bf","PMID:24587488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"extrinsic component of membrane","termid":"GO:0019898"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_01876":null,"SJAG_02699":null,"SJAG_03403":null,"SJAG_04552":null,"SJAG_04860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidylinositol 3-kinase complex","type":"exact"},{"name":"PI3-kinase p85-subunit alpha- PI3-kinase p110 complex","type":"narrow"},{"name":"PI3K complex","type":"exact"},{"name":"PIK3C3-PIK3R4 complex","type":"narrow"},{"name":"PIK3CA-PIK3R1 complex","type":"narrow"},{"name":"phosphoinositide 3-kinase complex","type":"exact"}],"termid":"GO:0005942","terms_by_termid":{"GO:0034271":null,"GO:0034272":null}}


id: PBO:0073247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 1","termid":"PBO:0073247"}


id: PBO:0083715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein that promotes export of misfolded polypeptides; required for ER-associated protein degradation of misfolded or unassembled proteins; initiates export of aberrant polypeptides from ER lumen by threading them into ER membrane and routing them to Hrd1p for ubiquitination; function normally requires N-terminal acetylation by NatB; N- and C- termini protrude into cytoplasm; similar to Dfm1p; homolog of mammalian derlin-1","termid":"PBO:0083715"}


id: PBO:0046037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 5","termid":"PBO:0046037"}


id: GO:0102864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-2-18:2-phosphatidylcholine + O2 + a reduced electron acceptor = 1-18:3-2-18:3-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:3-2-18:2-phosphatidylcholine desaturase activity (obsolete GO:0102864)","termid":"GO:0102864"}


id: MONDO:0008668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 von Willebrand disease (type 1 VWD) is a form of VWD characterized by a bleeding disorder associated with a partial quantitative plasmatic deficiency of an otherwise structurally and functionally normal Willebrand factor (von Willebrand factor; VWF).","definition_xrefs":["Orphanet:166078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary von Willebrand disease","termid":"MONDO:0019565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease 1","secondary_identifiers":["DOID:0060573","GARD:17019","NCIT:C131685","UMLS:C1264039","MESH:D056725","OMIM:193400","MEDGEN:220393","SCTID:128106003"],"synonyms":[{"name":"VON WILLEBRAND disease, type 1","type":"related"},{"name":"VWD type 1","type":"exact"},{"name":"VWD, type 1","type":"related"},{"name":"VWD1","type":"exact"},{"name":"Von Willebrand disease, type 1","type":"related"},{"name":"von Willebrand disease 1","type":"exact"},{"name":"von Willebrand disease type 1","type":"exact"},{"name":"von Willebrand disease type I","type":"exact"},{"name":"von Willebrand's disease type 1","type":"exact"},{"name":"von willebrand's disease 1","type":"exact"}],"termid":"MONDO:0008668","xrefs":{"Monarch":{"xref_id":"0008668"}}}


id: PBO:0045946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonal Fyn-associated substrate","termid":"PBO:0045946"}


id: GO:0008241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of C-terminal dipeptides from a polypeptide chain.","definition_xrefs":["GOC:mb","EC:3.4.15.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0008233","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptidyl-dipeptidase activity","termid":"GO:0008241"}


id: SO:0001230
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which hypoxanthine is bound to the ribose ring.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine","secondary_identifiers":["http://en.wikipedia.org/wiki/Inosine"],"synonyms":[{"name":"I","type":"related"},{"name":"RNAMOD:017","type":"related"}],"termid":"SO:0001230"}


id: GO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulonate + NADP+ = D-glucuronate + H+ + NADPH.","definition_xrefs":["RHEA:14909","EC:1.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-glucuronate reductase activity","secondary_identifiers":["Reactome:R-HSA-5661256","MetaCyc:GLUCURONATE-REDUCTASE-RXN","KEGG_REACTION:R01481"],"synonyms":[{"name":"D-glucuronate dehydrogenase activity","type":"related"},{"name":"D-glucuronate reductase activity","type":"narrow"},{"name":"NADP-L-gulonate dehydrogenase activity","type":"related"},{"name":"TPN-L-gulonate dehydrogenase activity","type":"related"},{"name":"aldehyde reductase II activity","type":"related"},{"name":"glucuronate dehydrogenase activity","type":"related"},{"name":"glucuronate reductase activity","type":"exact"}],"termid":"GO:0047939"}


id: PR:O60059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C56F2.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.08c","synonyms":[{"name":"Spom972h-puf1","type":"exact"}],"termid":"PR:O60059"}


id: GO:0007245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (mating sensu Saccharomyces) (obsolete GO:0007245)","synonyms":[{"name":"activation of MAPKKK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007245"}


id: GO:0052584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction in which a halogen in the donor substance acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on halogen in donors, with NAD or NADP as acceptor (obsolete GO:0052584)","termid":"GO:0052584"}


id: GO:0007175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor-activated receptor activity","termid":"GO:0007176"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor-activated receptor activity","secondary_identifiers":["GO:0007177"],"synonyms":[{"name":"EGF receptor downregulation","type":"exact"},{"name":"down regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"downregulation of epidermal growth factor receptor activity","type":"exact"},{"name":"inhibition of epidermal growth factor receptor activity","type":"narrow"},{"name":"negative regulation of EGF receptor activity","type":"exact"},{"name":"negative regulation of EGFR activity","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007175"}


id: PBO:0111381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Llp1","termid":"PBO:0111381"}


id: MONDO:0015157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human herpesvirus 8-related tumor","secondary_identifiers":["MEDGEN:1843228","Orphanet:102024","UMLS:C5680371","GARD:19830"],"synonyms":[{"name":"HHV-8-related disorder","type":"exact"}],"termid":"MONDO:0015157","xrefs":{"Monarch":{"xref_id":"0015157"}}}


id: MONDO:0043424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral, bacterial, fungal, or parasitic infectious process that affects the digestive system.","definition_xrefs":["NCIT:C35503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"digestive system infectious disorder","secondary_identifiers":["SCTID:715852004"],"synonyms":[{"name":"digestive system infection","type":"exact"},{"name":"gastrointestinal infection","type":"exact"},{"name":"gastrointestinal system infection","type":"exact"},{"name":"infection of gastrointestinal tract","type":"related"}],"termid":"MONDO:0043424","xrefs":{"Monarch":{"xref_id":"0043424"}}}


id: FYPO:0002753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing sulfate ions as the sole sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002058","FYPO:0002060","FYPO:0005447","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"abolished cell population growth on sulfate sulfur source","synonyms":[{"name":"abolished cell population growth on sulphate sulphur source","type":"exact"},{"name":"abolished growth on sulfate sulfur source","type":"broad"},{"name":"abolished sulfate utilization","type":"related"},{"name":"abolished vegetative cell population growth on sulfate ion sulfur source","type":"exact"},{"name":"cell population growth on sulfate sulfur source abolished","type":"exact"},{"name":"inability to utilize sulphate as sole sulphur source","type":"related"}],"termid":"FYPO:0002753"}


id: PBO:0113160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP70 family ATP-binding protein; role in protein folding and vacuolar protein import; required for Ub-dependent degradation of short-lived proteins; associated with the chaperonin-containing T-complex; unique specificity in propagation of [URE3] prions and vacuolar degradation of gluconeogenic enzymes; contributes to tRNA nuclear import during starvation; targeted to vacuoles via the AP-3 pathway; localizes to exosomes during heat stress with a role in thermotolerance; 98% identity with Ssa1p","termid":"PBO:0113160"}


id: PBO:0084084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs); involved in vesicular transport between the Golgi and ER, Golgi organization, and actin cytoskeleton organization; GEA1 has a paralog, GEA2, that arose from the whole genome duplication","termid":"PBO:0084084"}


id: PBO:0004042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tor complex Tor2 interacting protein 1","termid":"PBO:0004042"}


id: MONDO:0015445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of aorta coarctation.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"aorta coarctation","termid":"MONDO:0007345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant coarctation of aorta","secondary_identifiers":["GARD:18722","MEDGEN:443900","Orphanet:1455","UMLS:C2930803"],"synonyms":[{"name":"aorta coarctation, autosomal dominant","type":"exact"},{"name":"autosomal dominant aorta coarctation","type":"exact"}],"termid":"MONDO:0015445","xrefs":{"Monarch":{"xref_id":"0015445"}}}


id: FYPO:0003743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002060","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth during glucose starvation","synonyms":[{"name":"decreased cell population growth during glucose depletion","type":"exact"},{"name":"decreased cell population growth during glucose deprivation","type":"exact"},{"name":"decreased cell population growth during glucose limitation","type":"related"},{"name":"decreased cell population growth in response to glucose starvation","type":"exact"},{"name":"hypersensitive to glucose starvation","type":"related"},{"name":"reduced cell population growth during glucose starvation","type":"related"},{"name":"sensitive to glucose starvation","type":"related"},{"name":"slow cell population growth during glucose starvation","type":"narrow"}],"termid":"FYPO:0003743"}


id: PBO:0065822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C antisense RNA 1","termid":"PBO:0065822"}


id: PBO:0047787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 4","termid":"PBO:0047787"}


id: GO:0048921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cupula development","termid":"GO:0048887"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast cupula development","termid":"GO:0048921"}


id: GO:0045097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0716731363","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete basic/neutral keratin (obsolete GO:0045097)","synonyms":[{"name":"basic/neutral keratin","type":"exact"},{"name":"type II intermediate filament","type":"exact"}],"termid":"GO:0045097"}


id: MONDO:0007557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa with congenital localized absence of skin and deformity of nails","secondary_identifiers":["SCTID:2689001","ICD9:757.39","OMIM:132000","UMLS:C0268371","MESH:C562638","MEDGEN:82797","DOID:0111347"],"synonyms":[{"name":"EBD, Bart type","type":"exact"},{"name":"epidermolysis bullosa dystrophica, Bart type","type":"related"},{"name":"epidermolysis bullosa with congenital localized absence of skin and deformity of nails","type":"exact"}],"termid":"MONDO:0007557","xrefs":{"Monarch":{"xref_id":"0007557"}}}


id: PBO:0056120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 7","termid":"PBO:0056120"}


id: PBO:0116409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 5","termid":"PBO:0116409"}


id: PBO:0091945
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule regulator","termid":"PBO:0091945"}


id: PBO:0055724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 1","termid":"PBO:0055724"}


id: PBO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid P component, serum","termid":"PBO:0039692"}


id: PBO:0048552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GFOD1 antisense RNA 1","termid":"PBO:0048552"}


id: GO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with vasopressin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"vasopressin receptor activity","secondary_identifiers":["GO:0016931"],"synonyms":[{"name":"vasopressin activated calcium mobilizing receptor activity","type":"narrow"}],"termid":"GO:0005000"}


id: GO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of an alpha-1,2-linked mannose from the B-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:22160784"],"gene_count":0,"genotype_count":0,"name":"obsolete trimming of terminal mannose on B branch (obsolete GO:0036509)","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8B(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8B","type":"related"},{"name":"glycoprotein mannose trimming on B branch","type":"exact"}],"termid":"GO:0036509"}


id: FYPO:0005995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature long non-coding RNA (lncRNA) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased lncRNA level","synonyms":[{"name":"increased lncRNA accumulation","type":"related"},{"name":"increased lncRNA level during mitotic cell cycle","type":"related"},{"name":"increased lncRNA level during vegetative growth","type":"exact"},{"name":"increased lncRNA transcript level","type":"broad"},{"name":"increased long non-coding RNA level","type":"exact"},{"name":"increased mature lncRNA level","type":"exact"}],"termid":"FYPO:0005995"}


id: PBO:0062599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 9 pseudogene","termid":"PBO:0062599"}


id: PBO:0059347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12","termid":"PBO:0059347"}


id: PR:P54280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mismatch repair endonuclease PMS2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01675","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein pms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.02c","secondary_identifiers":["UniProtKB:P54280"],"synonyms":[{"name":"Spom972h-PMS2","type":"exact"}],"termid":"PR:P54280"}


id: GO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 2S ribosomal RNA (rRNA) molecule into a mature 2S rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"maturation of 2S rRNA","termid":"GO:0000475"}


id: MOD:01328
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - hydroxylethanone","definition_xrefs":["PubMed:17525468","Unimod:6#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetic acid - site W","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:01328"}


id: GO:2000462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of eukaryotic cell surface binding (obsolete GO:2000462)","synonyms":[{"name":"positive regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000462"}


id: GO:0019874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,8-diazacyclotetradecane-2,9-dione + H2O = N-(6-aminohexanoyl)-6-aminohexanoate.","definition_xrefs":["EC:3.5.2.12","RHEA:16225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"6-aminohexanoate-cyclic-dimer hydrolase activity","secondary_identifiers":["KEGG_REACTION:R03448","MetaCyc:3.5.2.12-RXN","UM-BBD_reactionID:r1097"],"synonyms":[{"name":"1,8-diazacyclotetradecane-2,9-dione lactamhydrolase activity","type":"related"}],"termid":"GO:0019874"}


id: PBO:0072878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAYSVFN motif domain containing 1","termid":"PBO:0072878"}


id: MONDO:0023076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic pustular folliculitis (EPF) is a skin disorder characterized by recurring itchy, red or skin-colored bumps and pustules (bumps containing pus). The condition is named after the fact that skin biopsies of this disorder find eosinophils (a type of immune cell) around hair follicles. The papules mostly appear on the face, scalp, neck and trunk and may persist for weeks or months. EPF affects males more than females.There are several variants of EPF includingclassic eosinophilic pustular folliculitis (mainly occurring in adults in Japan); HIV-associated EPF, also referred to as immunosuppression-associated EPF; and infantile EPF (with onset from birth or within the first year of life). Whether these are distinct disorders rather than variants of one disorder is controversial, partly because the underlying cause of EFP is not known.Several treatments have been described with variable results, including various oral or topical medications and phototherapy. In patients with HIV-associated disease, antiretroviral therapy tends to greatly diminish symptoms or even eliminate the condition.","definition_xrefs":["GARD:0008534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folliculitis","termid":"MONDO:0006552"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eosinophilic pustular folliculitis","secondary_identifiers":["icd11.foundation:1653155576","MESH:C535953","ICD9:704.8","MEDGEN:140800","SCTID:95333004","UMLS:C0406305","GARD:8534"],"synonyms":[{"name":"EPF","type":"related"},{"name":"Ofuji disease","type":"related"},{"name":"Ofuji's disease","type":"related"},{"name":"eosinophilic folliculitis","type":"related"},{"name":"eosinophilic folliculitis, pustular","type":"related"}],"termid":"MONDO:0023076","xrefs":{"Monarch":{"xref_id":"0023076"}}}


id: PBO:0039257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 6 family member A1","termid":"PBO:0039257"}


id: PBO:0018239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose alpha-glucosidase Agl1","termid":"PBO:0018239"}


id: MONDO:0000919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the ampulla of Vater.","definition_xrefs":["NCIT:C3536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenum cancer","termid":"MONDO:0000920"},{"relation_name":"is_a","term_name":"ampulla of vater neoplasm","termid":"MONDO:0000921"},{"relation_name":"is_a","term_name":"malignant tumor of extrahepatic bile duct","termid":"MONDO:0021321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"ampulla of vater cancer","secondary_identifiers":["MEDGEN:57785","UMLS:C0153454","ICD9:156.2","DOID:10020","SCTID:363417006"],"synonyms":[{"name":"cancer of hepatopancreatic ampulla","type":"exact"},{"name":"hepatopancreatic ampulla cancer","type":"exact"},{"name":"malignant ampulla of Vater neoplasm","type":"exact"},{"name":"malignant ampulla of Vater tumor","type":"exact"},{"name":"malignant ampulla of Vater tumour","type":"exact"},{"name":"malignant hepatopancreatic ampulla neoplasm","type":"exact"},{"name":"malignant neoplasm of ampulla of Vater","type":"exact"},{"name":"malignant neoplasm of hepatopancreatic ampulla","type":"exact"},{"name":"malignant neoplasm of the ampulla of Vater","type":"exact"},{"name":"malignant tumor of ampulla of Vater","type":"exact"},{"name":"malignant tumor of ampulla of vater","type":"exact"},{"name":"malignant tumor of the ampulla of Vater","type":"exact"},{"name":"malignant tumour of ampulla of Vater","type":"exact"},{"name":"malignant tumour of ampulla of vater","type":"exact"},{"name":"malignant tumour of the ampulla of Vater","type":"exact"}],"termid":"MONDO:0000919","xrefs":{"Monarch":{"xref_id":"0000919"}}}


id: PBO:0072314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26","termid":"PBO:0072314"}


id: GO:0034825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetralin + O2 + NADH + H+ = cis-1,2-dihydroxy-1,2,5,6,7,8-hexahydronaphthalene + NAD+.","definition_xrefs":["UM-BBD_reactionID:r1169"],"gene_count":0,"genotype_count":0,"name":"obsolete tetralin ring-hydroxylating dioxygenase activity (obsolete GO:0034825)","termid":"GO:0034825"}


id: GO:0021758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the putamen over time from its initial formation until its mature state. The putamen is the lens-shaped basal ganglion involved with control of voluntary movement in the brain.","definition_xrefs":["GOC:dgh","ISBN:0878937420","GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putamen development","termid":"GO:0021758"}


id: GO:0045841
data:
  {"annotated_genes":["SJAG_01679","SJAG_04884","SJAG_02169","SJAG_02451","SJAG_01837","SJAG_00883","SJAG_03353","SJAG_01330","SJAG_03681","SJAG_03126","SJAG_04999","SJAG_04126","SJAG_01082","SJAG_02336","SJAG_04699","SJAG_01297","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99376,111757,113584,115709,108054,90477,103681,107032,114072],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[114305,99220,101586,115363,106117,109708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[93959],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116484],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"negative regulation of mitotic nuclear division","termid":"GO:0045839"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902100"},{"relation_name":"is_a","term_name":"negative regulation of mitotic sister chromatid separation","termid":"GO:2000816"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"down-regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"downregulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"inhibition of mitotic metaphase/anaphase transition","type":"narrow"}],"termid":"GO:0045841","terms_by_termid":{"GO:0007094":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PATO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteriorly.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior orientation","synonyms":[{"name":"anteriorly directly","type":"exact"}],"termid":"PATO:0002490"}


id: GO:0018949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mxy"],"synonyms":[{"name":"m-xylene metabolism","type":"exact"},{"name":"meta-xylene metabolic process","type":"exact"},{"name":"meta-xylene metabolism","type":"exact"}],"termid":"GO:0018949"}


id: PBO:0052763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 55","termid":"PBO:0052763"}


id: GO:1900735
data:
  {"annotated_genes":["SJAG_03484","SJAG_04191","SJAG_03802","SJAG_01253","SJAG_02380","SJAG_00910"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105697,108437,108560,111172,113889,115952],"is_not":false,"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of flocculation.","definition_xrefs":["PMID:15466424","PMID:16568252","GOC:dgf","GOC:TermGenie","PMID:10591965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of flocculation","termid":"GO:0060256"},{"relation_name":"positively_regulates","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1900479"],"synonyms":[{"name":"activation of flocculation","type":"narrow"},{"name":"activation of flocculation via cell wall protein-carbohydrate interaction","type":"narrow"},{"name":"positive regulation of flocculation via cell wall protein-carbohydrate interaction","type":"related"},{"name":"up regulation of flocculation","type":"exact"},{"name":"up regulation of flocculation via cell wall protein-carbohydrate interaction","type":"exact"},{"name":"up-regulation of flocculation","type":"exact"},{"name":"up-regulation of flocculation via cell wall protein-carbohydrate interaction","type":"exact"},{"name":"upregulation of flocculation","type":"exact"},{"name":"upregulation of flocculation via cell wall protein-carbohydrate interaction","type":"exact"}],"termid":"GO:1900735","terms_by_termid":{"GO:1900735":null}}


id: GO:0102792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sinapoyl aldehyde + NADP + H2O = 2 H+ + trans-sinapate + NADPH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sinapaldehyde:NAD(P)+ oxidoreductase activity (obsolete GO:0102792)","termid":"GO:0102792"}


id: PBO:0072825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component pseudogene 1","termid":"PBO:0072825"}


id: GO:0048152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of S100 beta protein. S100 is a small calcium and zinc binding protein produced in astrocytes that is implicated in Alzheimer's disease, Down Syndrome and ALS.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete S100 beta biosynthetic process (obsolete GO:0048152)","synonyms":[{"name":"S100 beta anabolism","type":"exact"},{"name":"S100 beta biosynthesis","type":"exact"},{"name":"S100 beta formation","type":"exact"},{"name":"S100 beta synthesis","type":"exact"}],"termid":"GO:0048152"}


id: GO:1900952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 18-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900950"},{"relation_name":"is_a","term_name":"positive regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900955"},{"relation_name":"positively_regulates","term_name":"18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900952"}


id: PBO:0043813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 4","termid":"PBO:0043813"}


id: _global:has_penetrance
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed penetrance in a population. Penetrance is the proportion of individuals carrying an allele that express a trait associated with the allele.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_penetrance","synonyms":[{"name":"penetrance","type":"exact"}],"termid":"_global:has_penetrance"}


id: GO:0120033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"negatively_regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"}


id: PR:O94301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hfi1 gene.","definition_xrefs":["UniProtKB:O94301","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator hfi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.18c","synonyms":[{"name":"Spom972h-hfi1","type":"exact"}],"termid":"PR:O94301"}


id: PATO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Recurrent and often more or less cyclic alteration.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant","termid":"PATO:0001227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluctuating","termid":"PATO:0002374"}


id: PBO:0066415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renin","termid":"PBO:0066415"}


id: GO:0070510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 20 of histone H4.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4-K20 methylation (obsolete GO:0070510)","termid":"GO:0070510"}


id: PBO:0049921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HFE antisense RNA 1","termid":"PBO:0049921"}


id: GO:0052478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the deposition of callose by the symbiont in its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont cell wall callose deposition (obsolete GO:0052478)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont cell wall callose deposition","type":"exact"}],"termid":"GO:0052478"}


id: MOD:01590
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-farnesyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan.","definition_xrefs":["RESID:AA0500","ChEBI:52950","PubMed:18323630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"farnesylated residue","termid":"MOD:00437"},{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"isoprenylated tryptophan","termid":"MOD:01115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"3'-farnesyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","synonyms":[{"name":"(2S,3aR,8aS)-3a-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]-1,2,3,3a,8,8a-hexahydropyrrolo[2,3-b]indole-2-carboxylic acid","type":"exact"},{"name":"3'-farnesyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","type":"exact"},{"name":"LIPID 3'-farnesyl-2',N2-cyclotryptophan","type":"exact"}],"termid":"MOD:01590"}


id: MONDO:0006615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the sweat gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sweat gland disorder","secondary_identifiers":["SCTID:88232005","ICD9:705.89","MEDGEN:892310","MESH:D013543","ICD9:705.9","ICD9:705","UMLS:C0262643","DOID:1383"],"synonyms":[{"name":"disease of sweat gland","type":"exact"},{"name":"disease of sweat glands","type":"related"},{"name":"disease or disorder of sweat gland","type":"exact"},{"name":"disorder of sweat gland","type":"exact"},{"name":"disorder of sweat glands","type":"related"},{"name":"sweat gland disease","type":"exact"},{"name":"sweat gland disease or disorder","type":"exact"}],"termid":"MONDO:0006615","xrefs":{"Monarch":{"xref_id":"0006615"}}}


id: PBO:0064582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member C","termid":"PBO:0064582"}


id: MONDO:0006784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized as a coagulation disturbance in newborns due to vitamin K deficiency resulting in impaired production of coagulation factors II, VII, IX, and X, and proteins C and S by the liver.","definition_xrefs":["NCIT:C111857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"},{"relation_name":"is_a","term_name":"nutritional disorder","termid":"MONDO:0005137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemorrhagic disease of newborn","secondary_identifiers":["SCTID:12546009","MedDRA:10019601","MESH:D006475","EFO:1000964","ICD10CM:P53","ICD9:776.0","MEDGEN:42406","UMLS:C0019088"],"synonyms":[{"name":"hemorrhagic disease of newborn","type":"exact"},{"name":"vitamin K deficiency bleeding in newborn","type":"exact"}],"termid":"MONDO:0006784","xrefs":{"Monarch":{"xref_id":"0006784"}}}


id: PBO:0085047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein involved in pre-mRNA splicing; component of a complex containing Cef1p; has similarity to S. pombe Cwf15p","termid":"PBO:0085047"}


id: MONDO:0004706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"noninfectious dermatoses of eyelid","termid":"MONDO:0002137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"discoid lupus erythematosus of eyelid","secondary_identifiers":["MEDGEN:509835","UMLS:C0155180","ICD9:373.34","DOID:9076","icd11.foundation:743513349","SCTID:79291003"],"termid":"MONDO:0004706","xrefs":{"Monarch":{"xref_id":"0004706"}}}


id: GO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric distal convoluted tubule over time, from its formation to the mature structure. The metanephric distal convoluted tubule is the first segment of the metanephric nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal convoluted tubule development","termid":"GO:0072025"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}


id: PBO:0071307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 30","termid":"PBO:0071307"}


id: PBO:0087789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC)","termid":"PBO:0087789"}


id: GO:0045807
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103486],"is_not":false,"summary":null,"term":"GO:0045807"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of endocytosis","type":"narrow"},{"name":"stimulation of endocytosis","type":"narrow"},{"name":"up regulation of endocytosis","type":"exact"},{"name":"up-regulation of endocytosis","type":"exact"},{"name":"upregulation of endocytosis","type":"exact"}],"termid":"GO:0045807","terms_by_termid":{"GO:0045807":null}}


id: MONDO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a fascination with fire and recurrent episodes of fire setting during which the individual experiences a rising subjective sense of tension before the fire setting and a sense of gratification or relief when setting the fire. There is no ulterior motive (such as monetary gain or the expression of political ideology) to the fire setting.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyromania","secondary_identifiers":["icd11.foundation:1532500290","ICD9:312.33","ICD10CM:F63.1","SCTID:600009","MEDGEN:42028","UMLS:C0016142","MESH:D005391","NCIT:C94334","DOID:12402"],"synonyms":[{"name":"firesetting behavior","type":"exact"},{"name":"firesetting behaviour","type":"exact"},{"name":"pathological firesetting","type":"exact"}],"termid":"MONDO:0001522","xrefs":{"Monarch":{"xref_id":"0001522"}}}


id: GO:1990030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Ramification of basket cell axon surrounding cell bodies, forming the characteristic pericellular baskets from which the cell class derives its name.","definition_xrefs":["NIF_Subcellular:sao413722576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pericellular basket","synonyms":[{"name":"peri cellular basket","type":"exact"},{"name":"peri-cellular basket","type":"exact"}],"termid":"GO:1990030"}


id: PBO:0049200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIK1 antisense RNA 1","termid":"PBO:0049200"}


id: MONDO:0003900
data:
  {"annotated_genes":["SJAG_01748","SJAG_05979","SJAG_03785","SJAG_04865","SJAG_02855","SJAG_04380","SJAG_04290","SJAG_05239","SJAG_00400","SJAG_03805","SJAG_00321","SJAG_03905","SJAG_04541","SJAG_04077","SJAG_01349","SJAG_01344","SJAG_02763","SJAG_04287","SJAG_03596","SJAG_04969","SJAG_04118","SJAG_01884","SJAG_03453","SJAG_00853","SJAG_01474","SJAG_03429","SJAG_01151","SJAG_05213","SJAG_01013","SJAG_02039","SJAG_03151","SJAG_00031","SJAG_04569","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86961,86960,86959,86962,87114,87115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[85100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[84930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[84933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[85019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[87028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[86983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013944"},{"annotations":[84926,84925,84927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[85920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[85087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[86544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[85782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[86401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[86505,86504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[85422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[85423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[85647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[84828,84827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[86440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[85183,85184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[84883,84882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011462"},{"annotations":[86185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[86036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[85653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026777"},{"annotations":[85402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A disease involving the connective tissue.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00321":null,"SJAG_00400":null,"SJAG_00853":null,"SJAG_01013":null,"SJAG_01151":null,"SJAG_01344":null,"SJAG_01349":null,"SJAG_01474":null,"SJAG_01748":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02763":null,"SJAG_02855":null,"SJAG_03151":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03785":null,"SJAG_03805":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04077":null,"SJAG_04118":null,"SJAG_04287":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04865":null,"SJAG_04969":null,"SJAG_05213":null,"SJAG_05239":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"connective tissue disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1001986","SCTID:105969002","DOID:65","MESH:D003240","NANDO:2100172","NCIT:C26729","UMLS:C0009782","MEDGEN:1098"],"synonyms":[{"name":"connective tissue disease","type":"exact"},{"name":"connective tissue disease or disorder","type":"exact"},{"name":"connective tissue diseases","type":"exact"},{"name":"connective tissue disorder","type":"exact"},{"name":"connective tissue disorders","type":"exact"},{"name":"disease of connective tissue","type":"exact"},{"name":"disease or disorder of connective tissue","type":"exact"},{"name":"disease, connective tissue","type":"exact"},{"name":"disorder of connective tissue","type":"exact"},{"name":"primary disorder of connective tissue","type":"exact"},{"name":"tissue disease, connective","type":"exact"}],"termid":"MONDO:0003900","terms_by_termid":{"MONDO:0002629":null,"MONDO:0007205":null,"MONDO:0007483":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007908":null,"MONDO:0009050":null,"MONDO:0009849":null,"MONDO:0009925":null,"MONDO:0010523":null,"MONDO:0010621":null,"MONDO:0011462":null,"MONDO:0012316":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0012481":null,"MONDO:0013766":null,"MONDO:0013818":null,"MONDO:0013944":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0018874":null,"MONDO:0024541":null,"MONDO:0026777":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0003900"}}}


id: PBO:0031276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_G0_to_G1_transition","termid":"PBO:0031276"}


id: MONDO:0012898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, susceptibility to","termid":"MONDO:0100049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy 4, susceptibility to","secondary_identifiers":["OMIM:612417","MEDGEN:391001","UMLS:C2676275"],"synonyms":[{"name":"NRCLP4","type":"exact"},{"name":"narcolepsy 4","type":"related"},{"name":"narcolepsy 4, susceptibility to","type":"exact"}],"termid":"MONDO:0012898","xrefs":{"Monarch":{"xref_id":"0012898"}}}


id: PBO:0084033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi PI4K effector, PtdIns4P sensor, and retention receptor; interacts with glycosyltransferases, and in the PtdIns4P-bound state mediates retention of these enzymes in the Golgi; PtdIns4P sensor that limits PI4K signaling and regulates lipid homeostasis, interacting with the catalytic domain of Sac1p, the major PtdIns4P phosphatase, directing dephosphosphorylation of the Golgi pool of PtdIns4P; tetramerization required for function; contributes to telomere function; ortholog of human GOLPH3","termid":"PBO:0084033"}


id: MONDO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral retinal degeneration","termid":"MONDO:0001451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal lattice degeneration","secondary_identifiers":["UMLS:C0154856","SCTID:3577000","DOID:12165","ICD9:362.63","MEDGEN:102321"],"synonyms":[{"name":"palisade degeneration of retina","type":"exact"}],"termid":"MONDO:0001455","xrefs":{"Monarch":{"xref_id":"0001455"}}}


id: GO:0140810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H1 L-arginyl (position 54)= histone H1 L-citrullyl (position 54) + NH4+, resulting in histone H1 citrullination at position 54.","definition_xrefs":["PMID:24463520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone arginine deiminase activity","termid":"GO:0140794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"histone H1R54 arginine deiminase activity","synonyms":[{"name":"H1-R54 citrullination","type":"exact"},{"name":"histone H1-R54 deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H1-R54 specific)","type":"exact"}],"termid":"GO:0140810"}


id: GO:0052842
data:
  {"annotated_genes":["SJAG_00244","SJAG_04870","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104998,114868,88470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[88471,104999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol diphosphate pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2023971","Reactome:R-HSA-1855198"],"termid":"GO:0052842","terms_by_termid":{"GO:0052843":null,"GO:0052845":null}}


id: MONDO:1011617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, domestic cat","secondary_identifiers":["OMIA:001059-9685"],"termid":"MONDO:1011617","xrefs":{"Monarch":{"xref_id":"1011617"}}}


id: MONDO:0014320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Optic atrophy-intellectual disability syndrome is a rare, hereditary, syndromic intellectual disability characterized by developmental delay, intellectual disability, and significant visual impairment due to optic nerve atrophy, optic nerve hypoplasia or cerebral visual impairment. Other common clinical signs and symptoms are hypotonia, oromotor dysfunction, seizures, autism spectrum disorder, and repetitive behaviors. Dysmorphic facial features are variable and nonspecific.","definition_xrefs":["Orphanet:401777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bosch-Boonstra-Schaaf optic atrophy syndrome","secondary_identifiers":["UMLS:C3810363","ICD10CM:H47.2","GARD:12903","MEDGEN:816693","DOID:0112226","OMIM:615722"],"synonyms":[{"name":"BBSOAS","type":"exact"},{"name":"Bosch-Boonstra-Schaaf optic atrophy syndrome","type":"exact"},{"name":"optic atrophy-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0014320","xrefs":{"Monarch":{"xref_id":"0014320"}}}


id: MONDO:0021207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Crohn disease involving a pathogenic inflammatory response in the jejunum.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small bowel Crohn disease","termid":"MONDO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"Crohn jejunitis","secondary_identifiers":["MEDGEN:540631","SCTID:91390005","UMLS:C0267379"],"termid":"MONDO:0021207","xrefs":{"Monarch":{"xref_id":"0021207"}}}


id: PBO:0039393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMZ2 pseudogene 2","termid":"PBO:0039393"}


id: PBO:0054372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1766","termid":"PBO:0054372"}


id: PBO:0083141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of ORF HOT1/YMR172W","termid":"PBO:0083141"}


id: PBO:0040968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 39","termid":"PBO:0040968"}


id: PBO:0067899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 201","termid":"PBO:0067899"}


id: GO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of ectoderm during gastrulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of primary germ layer","termid":"GO:0001704"},{"relation_name":"part_of","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectoderm formation","termid":"GO:0001705"}


id: PBO:0003188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup107","termid":"PBO:0003188"}


id: GO:0032063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"negative regulation of translation in response to osmotic stress","termid":"GO:0032061"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational initiation in response to osmotic stress","synonyms":[{"name":"down regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"down-regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"downregulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"inhibition of translation initiation in response to osmotic stress","type":"narrow"}],"termid":"GO:0032063"}


id: PBO:0039934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF38 intronic transcript 1","termid":"PBO:0039934"}


id: GO:0047817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arginine + H2O = D-ornithine + urea.","definition_xrefs":["RHEA:12901","EC:3.5.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"D-arginase activity","secondary_identifiers":["MetaCyc:D-ARGINASE-RXN","KEGG_REACTION:R02458"],"synonyms":[{"name":"D-arginine amidinohydrolase activity","type":"related"}],"termid":"GO:0047817"}


id: PBO:0047369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 22","termid":"PBO:0047369"}


id: MONDO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 86, autosomal recessive","secondary_identifiers":["Orphanet:631085","DOID:0112342","UMLS:C5676910","OMIM:619735","MEDGEN:1801286"],"synonyms":[{"name":"SPG86","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 86","type":"exact"},{"name":"spastic paraplegia 86, autosomal recessive","type":"exact"}],"termid":"MONDO:0030673","xrefs":{"Monarch":{"xref_id":"0030673"}}}


id: PBO:0017721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal ion homeostasis protein Bsd2 (predicted)","termid":"PBO:0017721"}


id: GO:0060003
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107652],"is_not":false,"summary":null,"term":"GO:0060003"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions out of a cell or organelle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"copper ion export","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper export","type":"exact"}],"termid":"GO:0060003","terms_by_termid":{"GO:0060003":null}}


id: GO:0010749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010749"}


id: PBO:0049244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE like 1, mitochondrial","termid":"PBO:0049244"}


id: GO:1903559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-cyano-L-alanine.","definition_xrefs":["GOC:kmv","GO_REF:0000068","GOC:TermGenie","PMID:24100226","PMID:24843024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile catabolic process","termid":"GO:0050899"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"3-cyano-L-alanine metabolic process","termid":"GO:1903558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"3-cyano-L-alanine catabolic process","synonyms":[{"name":"3-cyano-L-alanine breakdown","type":"exact"},{"name":"3-cyano-L-alanine catabolism","type":"exact"},{"name":"3-cyano-L-alanine degradation","type":"exact"}],"termid":"GO:1903559"}


id: MONDO:0005655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with nematodes of the genus ascaridia. This condition usually occurs in fowl, often manifesting diarrhea.","definition_xrefs":["MESH:D001198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ascaridiasis","secondary_identifiers":["SCTID:76160002","DOID:3108","MEDGEN:2089","UMLS:C0003952","EFO:0007155","ICD10CM:B77","SCTID:2435008"],"synonyms":[{"name":"Ascaridia caused disease or disorder","type":"exact"},{"name":"Ascaridia disease or disorder","type":"exact"},{"name":"Ascaridia infectious disease","type":"exact"},{"name":"ascaridiosis","type":"related"},{"name":"infection by Ascaridia","type":"exact"},{"name":"infection caused by Ascaridia","type":"related"}],"termid":"MONDO:0005655","xrefs":{"Monarch":{"xref_id":"0005655"}}}


id: MONDO:0011910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1C (obsolete MONDO:0011910)","secondary_identifiers":["NCIT:C148318","OMIM:607801","DOID:0110302","SCTID:719986000","MESH:C563362","Orphanet:265"],"termid":"MONDO:0011910","xrefs":{"Monarch":{"xref_id":"0011910"}}}


id: PR:Q9P7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hop1 gene.","definition_xrefs":["UniProtKB:Q9P7P2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific protein hop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.02","synonyms":[{"name":"Spom972h-hop1","type":"exact"},{"name":"linear element-associated protein hop1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P2"}


id: PR:O74844
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta7 gene.","definition_xrefs":["UniProtKB:O74844","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.07","synonyms":[{"name":"Spom972h-fta7","type":"exact"},{"name":"sim4 complex subunit fta7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74844"}


id: PBO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_fusion_during_conjugation","termid":"PBO:0031789"}


id: GO:0048158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in mammalian oogenesis when the primordial germ cell is hardly distinguishable from other cortical cells of the ovary.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oogonium stage","synonyms":[{"name":"mammalian oogenesis stage 1","type":"exact"}],"termid":"GO:0048158"}


id: GO:0006697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecdysone, (22R)-2-beta,3-beta,14,22,25-pentahydroxycholest-7-en-6-one, an ecdysteroid found in insects.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone metabolic process","termid":"GO:0008205"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"ecdysone biosynthetic process","synonyms":[{"name":"ecdysone anabolism","type":"exact"},{"name":"ecdysone biosynthesis","type":"exact"},{"name":"ecdysone formation","type":"exact"},{"name":"ecdysone synthesis","type":"exact"}],"termid":"GO:0006697"}


id: GO:0010801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"},{"relation_name":"negatively_regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-threonine phosphorylation","termid":"GO:0010801"}


id: MOD:01928
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks either an L-asparagine residue or an L-aspartic acid residue with a glycine residue by an isopeptide bond with formation of N-(L-isoaspartyl)glycine.","definition_xrefs":["RESID:AA0126","PubMed:1826288","ChEBI:21479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoaspartyl)-glycine","synonyms":[{"name":"(2S)-2-amino-4-(carboxymethyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-(carboxymethyl)-butanediamic acid","type":"exact"},{"name":"N-(L-isoaspartyl)-glycine","type":"exact"},{"name":"N-beta-aspartylglycine","type":"exact"},{"name":"N4-(carboxymethyl)-asparagine","type":"exact"},{"name":"XLNK-4Asp-NGly","type":"exact"},{"name":"isoaspartyl glycine","type":"exact"}],"termid":"MOD:01928"}


id: PBO:0052139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 6","termid":"PBO:0052139"}


id: PBO:0003296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent microtubule severing protein (predicted)","termid":"PBO:0003296"}


id: PBO:0066905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 206","termid":"PBO:0066905"}


id: PBO:0077864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 5","termid":"PBO:0077864"}


id: MONDO:1011166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondritis dissecans that occurs in snow leopard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondritis dissecans, non-human animal","termid":"MONDO:1010298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondritis dissecans, snow leopard","secondary_identifiers":["OMIA:000748-29064"],"termid":"MONDO:1011166","xrefs":{"Monarch":{"xref_id":"1011166"}}}


id: GO:0062021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The protein localization to chromatin by which a cohesin ring complex is topologically linked to dsDNA (leading strand) as part of the mitotic cell cycle.","definition_xrefs":["GOC:vw","PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin dsDNA (leading strand) loading (obsolete GO:0062021)","termid":"GO:0062021"}


id: GO:0006776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid, all of which are derivatives of beta-carotene.","definition_xrefs":["GOC:jl","PMID:1503811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid metabolic process","termid":"GO:0001523"},{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"vitamin A metabolic process","synonyms":[{"name":"vitamin A metabolism","type":"exact"}],"termid":"GO:0006776"}


id: PBO:0042344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD81 molecule","termid":"PBO:0042344"}


id: PBO:0085308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase with a broad substrate specificity; has some similarity to GPM1/YKL152C, a phosphoglycerate mutase; YOR283W is not an essential gene","termid":"PBO:0085308"}


id: PBO:0060713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 10","termid":"PBO:0060713"}


id: FYPO:0003860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of miconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to miconazole","synonyms":[{"name":"resistance to miconazole during mitotic cell cycle","type":"related"},{"name":"resistance to miconazole during vegetative growth","type":"exact"},{"name":"resistant to miconazole","type":"exact"}],"termid":"FYPO:0003860"}


id: PBO:0063815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHLDA1 antisense RNA 1","termid":"PBO:0063815"}


id: MONDO:0025003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the domestic or wild goat of the genus Capra.","definition_xrefs":["MESH:D015511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goat disease","synonyms":[{"name":"caprine disease","type":"related"},{"name":"caprine diseases","type":"related"},{"name":"disease, caprine","type":"related"},{"name":"disease, goat","type":"related"},{"name":"diseases, caprine","type":"related"},{"name":"diseases, goat","type":"related"},{"name":"goat disease","type":"exact"}],"termid":"MONDO:0025003","xrefs":{"Monarch":{"xref_id":"0025003"}}}


id: PBO:0065227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR7 antisense RNA 1","termid":"PBO:0065227"}


id: GO:0007623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process in an organism that recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian rhythm","secondary_identifiers":["Wikipedia:Circadian_rhythm","GO:0050895","Reactome:R-HSA-400253"],"synonyms":[{"name":"circadian process","type":"exact"},{"name":"circadian response","type":"related"},{"name":"response to circadian rhythm","type":"related"}],"termid":"GO:0007623"}


id: PBO:0073358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family E member 2","termid":"PBO:0073358"}


id: MONDO:0033046
data:
  {"annotated_genes":["SJAG_01354"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85168],"is_not":false,"summary":null,"term":"MONDO:0033046"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080255","OMIM:617564","UMLS:C4479655","MEDGEN:1390366"],"synonyms":[{"name":"MGORS8","type":"related"},{"name":"Meier-Gorlin syndrome 8","type":"exact"}],"termid":"MONDO:0033046","terms_by_termid":{"MONDO:0033046":null},"xrefs":{"Monarch":{"xref_id":"0033046"}}}


id: GO:0042184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylene catabolic process","synonyms":[{"name":"xylene breakdown","type":"exact"},{"name":"xylene catabolism","type":"exact"},{"name":"xylene degradation","type":"exact"}],"termid":"GO:0042184"}


id: FYPO:0008229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phosphate (Pi). Cells stop growing (and may die) at a concentration of phosphate that allows wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to phosphate (Pi)","termid":"FYPO:0008229"}


id: _global:towards
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"q towards e2 if and only if q is a relational quality such that q inheres-in some e, and e != e2 and q is dependent on e2","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"towards","secondary_identifiers":["RO:0002503"],"termid":"_global:towards"}


id: PBO:0041165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 2","termid":"PBO:0041165"}


id: PBO:0053641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 689","termid":"PBO:0053641"}


id: PBO:0090411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Chp1","termid":"PBO:0090411"}


id: GO:0062111
data:
  {"annotated_genes":["SJAG_01803","SJAG_03528","SJAG_00328","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93530,93529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[74320,104102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into the organelle.","definition_xrefs":["PMID:29529046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into organelle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0062111","terms_by_termid":{"GO:0140209":null,"GO:1904257":null}}


id: GO:1904388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ncRNA transcription associated with protein coding gene TSS/TES.","definition_xrefs":["PMID:20502517","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ncRNA transcription associated with protein coding gene TSS/TES (obsolete GO:1904388)","synonyms":[{"name":"downregulation of ncRNA transcription associated with protein coding gene TSS/TES","type":"exact"}],"termid":"GO:1904388"}


id: MONDO:0017499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital absence of both forearm and hand, bilateral is a rare developmental defect during embryogenesis characterized by a bilateral, transverse absence of the radius and ulna (of varying terminal lengths), as well as all the elements composing the hand.","definition_xrefs":["Orphanet:295095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of both forearm and hand","termid":"MONDO:0017443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both forearm and hand, bilateral","secondary_identifiers":["icd11.foundation:1524444518","UMLS:C2910270","MEDGEN:1843505","ICD10CM:Q71.23"],"synonyms":[{"name":"radio-ulnar terminal transverse meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017499","xrefs":{"Monarch":{"xref_id":"0017499"}}}


id: MONDO:0003725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic disorder characterized by epithelial and/or myoepithelial tissue growth in the breast lobules. It may be associated with apocrine changes or sclerosis.","definition_xrefs":["NCIT:C3484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast adenosis","secondary_identifiers":["UMLS:C0085750","MESH:D005348","EFO:0006891","DOID:5998","MEDGEN:39336"],"synonyms":[{"name":"adenosis","type":"broad"},{"name":"adenosis - breast","type":"exact"},{"name":"adenosis of breast","type":"exact"},{"name":"adenosis of the breast","type":"exact"},{"name":"breast adenosis","type":"exact"},{"name":"microglandular adenosis","type":"related"}],"termid":"MONDO:0003725","xrefs":{"Monarch":{"xref_id":"0003725"}}}


id: PR:P32747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydroorotate dehydrogenase (quinone), mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00561","PRO:DNx","PANTHER:PTHR11938:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.12c","secondary_identifiers":["UniProtKB:P32747"],"synonyms":[{"name":"DHOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHODase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHOdehase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DHODH","type":"exact"},{"name":"dihydroorotate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32747"}


id: PBO:0080143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle amine transport 1","termid":"PBO:0080143"}


id: PBO:0041381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5a receptor 2","termid":"PBO:0041381"}


id: GO:0160045
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multilamellar subcellular structure formed in the cytoplasm of developing neuron, composed of Tmem240 and Emd proteins.","definition_xrefs":["PMID:32535204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"TMEM240-body","synonyms":[{"name":"T240-body","type":"exact"}],"termid":"GO:0160045"}


id: MONDO:0017988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal atrial tachycardia is a rare supraventricular arrhythmia in neonates and young infants that is characterized by multiple P waves with varying P wave morphology and is usually asymptomatic.","definition_xrefs":["Orphanet:3282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"multifocal atrial tachycardia","secondary_identifiers":["UMLS:C0221158","icd11.foundation:262929566","MEDGEN:66362","SCTID:49982000","HP:0011701","ICD9:427.89","GARD:1235"],"synonyms":[{"name":"MAT","type":"exact"},{"name":"chaotic atrial tachycardia","type":"exact"},{"name":"multifocal atrial tachycardia","type":"exact"},{"name":"multifocal atrial tachycardia (disease)","type":"exact"}],"termid":"MONDO:0017988","xrefs":{"Monarch":{"xref_id":"0017988"}}}


id: GO:0046922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor.","definition_xrefs":["EC:2.4.1.221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"peptide-O-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5173192","MetaCyc:2.4.1.221-RXN","Reactome:R-HSA-1912349"],"synonyms":[{"name":"GDP-L-fucose:polypeptide fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:polypeptide O-alpha-L-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose protein O-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:polypeptide fucosyltransferase activity","type":"related"}],"termid":"GO:0046922"}


id: PBO:0080377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS9 domain containing 1","termid":"PBO:0080377"}


id: PBO:0089247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in vesicle docking Pep5/Vps11-like","termid":"PBO:0089247"}


id: GO:0036143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kringle domain. Kringle domains are protein domains that fold into large loops stabilized by 3 disulfide linkages, and are important in protein-protein interactions with blood coagulation factors.","definition_xrefs":["GOC:yaf","Wikipedia:Kringle_domain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"kringle domain binding","termid":"GO:0036143"}


id: PBO:0082338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant","termid":"PBO:0082338"}


id: GO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein phosphatidylinositol + H2O = phosphatidate + glycoprotein inositol.","definition_xrefs":["EC:3.1.4.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase D activity","termid":"GO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"glycosylphosphatidylinositol phospholipase D activity","secondary_identifiers":["MetaCyc:GLYCOPROTEIN-PHOSPHOLIPASE-D-RXN","Reactome:R-HSA-8940388","RHEA:10832"],"synonyms":[{"name":"GPI-PLD activity","type":"related"},{"name":"glycoprotein phospholipase D activity","type":"exact"},{"name":"glycoprotein-phosphatidylinositol phosphatidohydrolase activity","type":"related"},{"name":"phosphatidylinositol phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-glycan-specific phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-specific phospholipase D activity","type":"related"}],"termid":"GO:0004621"}


id: PBO:0039080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylglycerone phosphate synthase","termid":"PBO:0039080"}


id: PBO:0114066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDT pseudogene 1","termid":"PBO:0114066"}


id: GO:0035744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a T-helper 1 cell.","definition_xrefs":["GOC:BHF","CL:0000545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell cytokine production","termid":"GO:0035743"},{"relation_name":"part_of","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell cytokine production","synonyms":[{"name":"Th1 cell cytokine production","type":"exact"}],"termid":"GO:0035744"}


id: PBO:0052213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel regulator","termid":"PBO:0052213"}


id: PBO:0039750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 1","termid":"PBO:0039750"}


id: MOD:01507
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["Unimod:889#N-term","OMSSA:176","OMSSA:211","Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ117nterm","type":"exact"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"},{"name":"mTRAQ heavy on nterm","type":"exact"}],"termid":"MOD:01507"}


id: PBO:0017998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat/BOP1NT protein Erb1 (predicted)","termid":"PBO:0017998"}


id: PBO:0068590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 41, pseudogene","termid":"PBO:0068590"}


id: MONDO:0021470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pancreas.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of pancreas","secondary_identifiers":["NCIT:C4612","SCTID:92264007","MEDGEN:91126","UMLS:C0347284","icd11.foundation:1870352651","ICD10CM:D13.6"],"synonyms":[{"name":"benign neoplasm of the pancreas","type":"exact"},{"name":"benign pancreas neoplasm","type":"exact"},{"name":"benign pancreas tumor","type":"exact"},{"name":"benign pancreas tumour","type":"exact"},{"name":"benign pancreatic neoplasm","type":"exact"},{"name":"benign pancreatic tumor","type":"exact"},{"name":"benign pancreatic tumour","type":"exact"},{"name":"benign tumor of pancreas","type":"exact"},{"name":"benign tumor of the pancreas","type":"exact"},{"name":"benign tumour of pancreas","type":"exact"},{"name":"benign tumour of the pancreas","type":"exact"},{"name":"pancreas benign neoplasm","type":"exact"},{"name":"pancreas neoplasm, benign","type":"exact"},{"name":"pancreas tumor, benign","type":"exact"},{"name":"pancreatic neoplasm, benign","type":"exact"},{"name":"pancreatic tumor, benign","type":"exact"}],"termid":"MONDO:0021470","xrefs":{"Monarch":{"xref_id":"0021470"}}}


id: PR:O14253
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear cap-binding protein subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding protein subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.07","secondary_identifiers":["UniProtKB:O14253"],"synonyms":[{"name":"80 kDa nuclear cap-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CBP80 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NCBP 80 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NCBP1","type":"exact"}],"termid":"PR:O14253"}


id: PBO:0070715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 20","termid":"PBO:0070715"}


id: GO:0010842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia.","definition_xrefs":["PMID:1270266","GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina layer formation","synonyms":[{"name":"retinal lamination","type":"exact"},{"name":"retinal layer formation","type":"exact"}],"termid":"GO:0010842"}


id: PBO:0005517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing protein Rik1","termid":"PBO:0005517"}


id: GO:0061701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, bilayered proteolipid vesicle released from gram-negative bacterial outer membranes.","definition_xrefs":["GOC:pr","GOC:dph","PMID:20596524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"bacterial outer membrane vesicle","termid":"GO:0061701"}


id: PBO:0086940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; GSP1 has a paralog, GSP2, that arose from the whole genome duplication","termid":"PBO:0086940"}


id: FYPO:0006474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to starvation for one or more amino acids is abnormal.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of translation in response to amino acid starvation","synonyms":[{"name":"abnormal regulation of translation during cellular response to amino acid starvation","type":"exact"},{"name":"abnormal regulation of translation in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of translation in response to amino acid starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006474"}


id: PBO:0065352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 2","termid":"PBO:0065352"}


id: PBO:0030259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_chloramphenicol","termid":"PBO:0030259"}


id: GO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response to an antigenic stimulus, which can be include any number of T cell or B cell epitopes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"},{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}


id: MONDO:0014316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Alzheimer disease in which the cause of the disease is a mutation in the PLD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Alzheimer disease 19","secondary_identifiers":["MEDGEN:816679","OMIM:615711","UMLS:C3810349","DOID:0110051"],"synonyms":[{"name":"AD19","type":"exact"},{"name":"Alzheimer disease 19","type":"exact"},{"name":"Alzheimer disease 19 late onset","type":"exact"},{"name":"Alzheimer disease 19, late-onset","type":"related"},{"name":"Alzheimer disease caused by mutation in PLD3","type":"exact"},{"name":"Alzheimer disease type 19","type":"exact"},{"name":"Alzheimer's disease 19","type":"exact"},{"name":"Alzheimer's disease type 19","type":"exact"},{"name":"PLD3 Alzheimer disease","type":"exact"}],"termid":"MONDO:0014316","xrefs":{"Monarch":{"xref_id":"0014316"}}}


id: MONDO:0011836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid Hurthle cell carcinoma","secondary_identifiers":["UMLS:C0749424","MESH:C536913","NCIT:C4946","ONCOTREE:THHC","DOID:8161","GARD:9428","OMIM:607464","SCTID:423158009","MEDGEN:196672"],"synonyms":[{"name":"Hurthle cell carcinoma of the thyroid","type":"exact"},{"name":"Hurthle cell carcinoma of the thyroid gland","type":"exact"},{"name":"Hurthle cell carcinoma of thyroid","type":"exact"},{"name":"Hurthle cell carcinoma of thyroid gland","type":"exact"},{"name":"Hurthle cell thyroid cancer","type":"related"},{"name":"Hurthle cell thyroid gland carcinoma","type":"exact"},{"name":"Hurthle cell thyroid neoplasia","type":"related"},{"name":"follicular thyroid cancer, Hurthle cell type","type":"related"},{"name":"oncocytic carcinoma of the thyroid","type":"exact"},{"name":"oncocytic carcinoma of thyroid","type":"exact"},{"name":"thyroid Hurthle cell carcinoma","type":"exact"},{"name":"thyroid cancer, Hurthle cell","type":"related"},{"name":"thyroid cancer, follicular, Hurthle cell type","type":"related"},{"name":"thyroid carcinoma, Hurthle cell","type":"exact"},{"name":"thyroid gland Hurthle cell carcinoma","type":"exact"},{"name":"thyroid gland oncocytic follicular carcinoma","type":"exact"},{"name":"thyroid oncocytic carcinoma","type":"exact"}],"termid":"MONDO:0011836","xrefs":{"Monarch":{"xref_id":"0011836"}}}


id: PBO:0044395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 23, pseudogene","termid":"PBO:0044395"}


id: PBO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-peroxisomes_absent","termid":"PBO:0031833"}


id: PBO:0041582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 31","termid":"PBO:0041582"}


id: PBO:0059712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 20","termid":"PBO:0059712"}


id: PBO:0047455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and double SH3 domains 2","termid":"PBO:0047455"}


id: PR:O94733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.01 gene.","definition_xrefs":["UniProtKB:O94733","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.01","synonyms":[{"name":"Spom972h-SPCC191.01","type":"exact"}],"termid":"PR:O94733"}


id: GO:0051432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH1 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["PMID:11048732","Prosite:PS01080","PMID:12133724","PMID:9020082","PMID:9704409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BH1 domain binding","termid":"GO:0051432"}


id: GO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct assembly of ribosomes or ribosomal subunits in vivo, but is not a component of the assembled ribosome when performing its normal biological function.","definition_xrefs":["GOC:jl","PMID:12150913"],"gene_count":0,"genotype_count":0,"name":"obsolete ribosomal chaperone activity (obsolete GO:0000005)","synonyms":[{"name":"ribosomal chaperone activity","type":"exact"}],"termid":"GO:0000005"}


id: GO:2001107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of guanyl-nucleotide exchange factor activity","termid":"GO:1905098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho guanyl-nucleotide exchange factor activity","synonyms":[{"name":"negative regulation of Rho guanine nucleotide exchange factor","type":"exact"},{"name":"negative regulation of RhoGEF","type":"exact"}],"termid":"GO:2001107"}


id: PR:Q10057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein disulfide-isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide-isomerase C1F5.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.02","secondary_identifiers":["UniProtKB:Q10057"],"synonyms":[{"name":"Spom972h-P4HB","type":"exact"}],"termid":"PR:Q10057"}


id: MONDO:0003331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that arises from the ovary and is characterized by the presence of tissues derived exclusively from one embryonic germ cell layer.","definition_xrefs":["NCIT:C7286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian teratoma","termid":"MONDO:0005602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian monodermal teratoma","secondary_identifiers":["MEDGEN:266265","DOID:5207","UMLS:C1302569"],"synonyms":[{"name":"monodermal teratoma","type":"exact"},{"name":"monodermal teratoma (morphologic abnormality)","type":"exact"},{"name":"ovarian monodermal teratoma","type":"exact"}],"termid":"MONDO:0003331","xrefs":{"Monarch":{"xref_id":"0003331"}}}


id: GO:0052795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of alpha-(2->6)-glycosidic linkages of terminal sialic residues in substrates.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exo-alpha-(2->6)-sialidase activity (obsolete GO:0052795)","synonyms":[{"name":"exo-alpha-(2,6)-sialidase activity","type":"exact"},{"name":"exo-alpha-2,6-sialidase activity","type":"exact"}],"termid":"GO:0052795"}


id: PBO:0079365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 8","termid":"PBO:0079365"}


id: GO:0016020
data:
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id: PBO:0072047
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id: MONDO:0031332
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bleeding syndrome characterized by spontaneous mucocutaneous bleeding and an exaggerated response to trauma due to a constitutional thrombocytopenia","definition_xrefs":["Orphanet:849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Glanzmann thrombasthenia","termid":"MONDO:0100326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Glanzmann thrombasthenia 1","secondary_identifiers":["DOID:2219","MESH:D013915","OMIM:273800","NCIT:C61249","SCTID:32942005","GARD:15240"],"synonyms":[{"name":"BDPLT2","type":"exact"},{"name":"Diacyclothrombopathia 2B 3A","type":"related"},{"name":"GP IIb-IIIa Complex, deficiency of","type":"related"},{"name":"GT","type":"related"},{"name":"Glanzmann thrombasthenia","type":"broad"},{"name":"Glanzmann thrombasthenia 1","type":"exact"},{"name":"Glanzmann thrombasthenia type A","type":"related"},{"name":"Glanzmann's thrombasthenia","type":"broad"},{"name":"Platelet fibrinogen receptor, deficiency of","type":"related"},{"name":"Platelet glycoprotein 2B 3A deficiency","type":"related"},{"name":"Platelet glycoprotein IIb-IIIa deficiency","type":"related"},{"name":"Thrombocytasthenia","type":"exact"},{"name":"bleeding disorder, Platelet-type, 2","type":"related"},{"name":"deficiency of GP 2B 3A complex","type":"related"},{"name":"deficiency of GP IIb-IIIa complex","type":"exact"},{"name":"deficiency of glycoprotein complex IIb-IIIa","type":"exact"},{"name":"deficiency of platelet fibrinogen receptor","type":"exact"},{"name":"glycoprotein Complex IIb-IIIa, deficiency of","type":"related"},{"name":"glycoprotein IIb/IIIa defect","type":"exact"},{"name":"platelet glycoprotein IIb-IIIa deficiency","type":"exact"},{"name":"platelet-type bleeding disorder 2","type":"exact"},{"name":"thrombasthenia","type":"exact"},{"name":"thrombasthenia of Glanzmann and Naegeli","type":"exact"}],"termid":"MONDO:0031332","xrefs":{"Monarch":{"xref_id":"0031332"}}}


id: PBO:0053714
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 923","termid":"PBO:0053714"}


id: PBO:0075560
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id: MONDO:0033636
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id: GO:0097730
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id: MONDO:0019357
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital cervical spinal stenosis is a rare neurological disease characterized by a congenital narrowing of the bony anatomy of the cervical spinal canal (sagittal diameter <14mm), predisposing the individual to symptomatic neural compression, such as cramps, paresthesias, pain, muscle hypertonia and weakness, myelopathy and sphincter disturbances.","definition_xrefs":["Orphanet:831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital narrowing of cervical spinal canal","secondary_identifiers":["MEDGEN:1653635","UMLS:C4749275","GARD:18706"],"synonyms":[{"name":"congenital cervical spinal stenosis","type":"related"},{"name":"congenital stenosis of the cervical spine","type":"exact"}],"termid":"MONDO:0019357","xrefs":{"Monarch":{"xref_id":"0019357"}}}


id: MONDO:0003394
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the dental pulp.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental pulp disorder","secondary_identifiers":["MESH:D003788","SCTID:57203004","DOID:5330","NCIT:C34530","EFO:0009540","UMLS:C0011405","MEDGEN:8305","ICD9:522.9"],"synonyms":[{"name":"dental pulp disease","type":"exact"},{"name":"dental pulp disease or disorder","type":"exact"},{"name":"dental pulp disorder","type":"exact"},{"name":"disease of dental pulp","type":"exact"},{"name":"disease or disorder of dental pulp","type":"exact"},{"name":"disorder of dental pulp","type":"exact"},{"name":"disorder of pulp of tooth","type":"exact"},{"name":"pulp disorder","type":"exact"}],"termid":"MONDO:0003394","xrefs":{"Monarch":{"xref_id":"0003394"}}}


id: GO:0018293
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and flavin-adenine dinucleotide (FAD).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-FAD linkage","termid":"GO:0018293"}


id: PBO:0109394
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 22","termid":"PBO:0109394"}


id: SO:0001632
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_gene_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:downstream","type":"related"},{"name":"Jannovar:downstream_gene_variant","type":"exact"},{"name":"VEP:downstream_gene_variant","type":"exact"},{"name":"downstream gene variant","type":"exact"},{"name":"snpEff:DOWNSTREAM","type":"exact"}],"termid":"SO:0001632"}


id: PBO:0073318
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 1","termid":"PBO:0073318"}


id: PBO:0070973
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 11","termid":"PBO:0070973"}


id: MONDO:0001171
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of salpingo-oophoritis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingo-oophoritis","termid":"MONDO:0001172"},{"relation_name":"is_a","term_name":"acute salpingitis","termid":"MONDO:0001173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute salpingo-oophoritis","secondary_identifiers":["MEDGEN:510243","DOID:10971","SCTID:266581008","UMLS:C0156327","ICD9:614.0"],"synonyms":[{"name":"acute salpingitis and oophoritis","type":"exact"},{"name":"salpingo-oophoritis, acute","type":"exact"}],"termid":"MONDO:0001171","xrefs":{"Monarch":{"xref_id":"0001171"}}}


id: GO:0051849
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating the symbiont's antigen processing or presentation pathways, e.g. by blocking any stage in MHC class II presentation. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"gene_count":0,"genotype_count":0,"name":"obsolete active evasion of symbiont immune response via regulation of symbiont antigen processing and presentation (obsolete GO:0051849)","synonyms":[{"name":"active evasion of symbiont immune response via regulation of symbiont antigen processing and presentation","type":"exact"},{"name":"active evasion of symbiont immune response via regulation of symbiont antigen processing and presentation pathway","type":"exact"},{"name":"active immune evasion via modulation of symbiont antigen processing and presentation","type":"exact"},{"name":"active immune evasion via modulation of symbiont antigen processing/presentation","type":"exact"},{"name":"active immune evasion via regulation of symbiont antigen processing or presentation","type":"exact"}],"termid":"GO:0051849"}


id: PBO:0046223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 16","termid":"PBO:0046223"}


id: GO:2001167
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2B ubiquitination (obsolete GO:2001167)","termid":"GO:2001167"}


id: PBO:0089394
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id: PBO:0005735
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase (predicted)","termid":"PBO:0005735"}


id: PBO:0060596
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit D2","termid":"PBO:0060596"}


id: PBO:0082144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Sar1p GTPase activity; paralog of Sec23 but does not associate with the COPII components; not an essential gene","termid":"PBO:0082144"}


id: PBO:0029634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers","termid":"PBO:0029634"}


id: PR:O74834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil-DNA glycosylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04380","PANTHER:PTHR11264:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.06","secondary_identifiers":["UniProtKB:O74834"],"synonyms":[{"name":"Spom972h-UNG","type":"exact"},{"name":"UDG (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74834"}


id: PBO:0073103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 7","termid":"PBO:0073103"}


id: FYPO:0005682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers, occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"},{"relation_name":"is_a","term_name":"decreased microtubule polymerization or depolymerization","termid":"FYPO:0000904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule shrinkage during vegetative growth","type":"related"},{"name":"reduced microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005682"}


id: PBO:0068437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 7, pseudogene","termid":"PBO:0068437"}


id: MONDO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the ovary.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"},{"relation_name":"is_a","term_name":"oophoritis","termid":"MONDO:0006877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous oophoritis","secondary_identifiers":["ICD9:016.60","MEDGEN:546959","UMLS:C0275932","ICD9:016.6","SCTID:84194006","icd11.foundation:1634640694","DOID:2148"],"termid":"MONDO:0002226","xrefs":{"Monarch":{"xref_id":"0002226"}}}


id: GO:0016933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"extracellularly glycine-gated ion channel activity","synonyms":[{"name":"extracellular-glycine-gated ion channel activity","type":"exact"},{"name":"glycine receptor","type":"broad"}],"termid":"GO:0016933"}


id: GO:0086063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of an SA node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated sodium channel activity involved in SA node cell action potential","synonyms":[{"name":"voltage-gated sodium channel activity involved in SA node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in SAN cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086063"}


id: PBO:0046888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM9C pseudogene 1","termid":"PBO:0046888"}


id: GO:0050835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0356"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide (obsolete GO:0050835)","termid":"GO:0050835"}


id: GO:0072677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an eosinophil within or between different tissues and organs of the body.","definition_xrefs":["CL:0000771","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil migration","termid":"GO:0072677"}


id: MONDO:0033187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete combined oxidative phosphorylation defect type 29 (obsolete MONDO:0033187)","termid":"MONDO:0033187","xrefs":{"Monarch":{"xref_id":"0033187"}}}


id: GO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A punctate, filamentous structure composed of Bcl10 that appears in the cytoplasm of T-cells shortly after T-cell receptor stimulation. Polkadots stands for Punctate Oligomeric Killing and Activating DOmains Transducing Signals.","definition_xrefs":["PMID:14724296","PMID:16495340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"polkadots","termid":"GO:0002096"}


id: PBO:0066543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 7 binding protein","termid":"PBO:0066543"}


id: PBO:0013813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phophatidylinositol 3-kinase complex subunit Vps38","termid":"PBO:0013813"}


id: GO:0031430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A band","termid":"GO:0031672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"M band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"M disc","type":"exact"},{"name":"M line","type":"narrow"},{"name":"mesophragma","type":"exact"},{"name":"midline","type":"broad"}],"termid":"GO:0031430"}


id: PR:O74394
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L33, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L39, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.08c","secondary_identifiers":["UniProtKB:O74394"],"synonyms":[{"name":"SPBC4F6.08c","type":"related"},{"name":"Spom972h-MRPL33","type":"exact"}],"termid":"PR:O74394"}


id: PBO:0084750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial manganese superoxide dismutase; protects cells against oxygen toxicity and oxidative stress; human mitochondrial SOD2 can complement a yeast null mutant and human cytoplasmic SOD1 can also complement when targeted to the mitochondrial matrix","termid":"PBO:0084750"}


id: MONDO:0008104
data:
  {"annotated_genes":["SJAG_02342","SJAG_00993","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87012,87013,87014],"is_not":false,"summary":null,"term":"MONDO:0008104"}]},"cv_name":"mondo","definition":"Noonan syndrome caused by mutations in the PTPN11 gene.","definition_xrefs":["NCIT:C75459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4551602","OMIM:163950","GARD:7223","MEDGEN:1638960","DOID:0060578"],"synonyms":[{"name":"Male Turner syndrome","type":"related"},{"name":"NS1","type":"exact"},{"name":"Noonan syndrome","type":"related"},{"name":"Noonan syndrome 1","type":"exact"},{"name":"Noonan syndrome type 1","type":"exact"},{"name":"Turner phenotype with normal karyotype","type":"related"},{"name":"female pseudo-Turner syndrome","type":"related"},{"name":"pterygium colli syndrome","type":"related"}],"termid":"MONDO:0008104","terms_by_termid":{"MONDO:0008104":null},"xrefs":{"Monarch":{"xref_id":"0008104"}}}


id: GO:0033473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any indole-3-acetic acid conjugate, a form of indoleacetic acid covalently bound to another molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indoleacetic acid conjugate metabolic process","synonyms":[{"name":"IAA conjugate metabolic process","type":"exact"},{"name":"indole acetic acid conjugate metabolic process","type":"exact"},{"name":"indole acetic acid conjugate metabolism","type":"exact"},{"name":"indoleacetic acid conjugate metabolism","type":"exact"}],"termid":"GO:0033473"}


id: MONDO:0016551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital primary megaureter","termid":"MONDO:0018960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital primary megaureter, refluxing form","secondary_identifiers":["UMLS:C5680935","MEDGEN:1842549","icd11.foundation:1229028805","GARD:20641","Orphanet:238650"],"termid":"MONDO:0016551","xrefs":{"Monarch":{"xref_id":"0016551"}}}


id: MONDO:0022458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by congenital constriction bands, often deformity of the nails with distally located bands, and commonly a malformation of the hand.","definition_xrefs":["PMID:374416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annular constricting bands","termid":"MONDO:0022458","xrefs":{"Monarch":{"xref_id":"0022458"}}}


id: FYPO:0001463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases abnormally, or does not change, immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001463"}


id: PBO:0014590
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rrm-containing protein, isolated from a synthetic lethal Mutant with Nab2","termid":"PBO:0014590"}


id: PBO:0041330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 88","termid":"PBO:0041330"}


id: GO:0005839
data:
  {"annotated_genes":["SJAG_03151","SJAG_04229","SJAG_04888","SJAG_02562","SJAG_00778","SJAG_04306","SJAG_04969","SJAG_01014","SJAG_05316","SJAG_02502","SJAG_00808","SJAG_04357","SJAG_00128","SJAG_04541"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72635,69425,74823,75097,78141,71614,72194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019773"},{"annotations":[69181,57239,56799,61091,61410,63252,63987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019774"}]},"cv_name":"cellular_component","definition":"A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.","definition_xrefs":["GOC:rb","PMID:10806206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_00778":null,"SJAG_00808":null,"SJAG_01014":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_03151":null,"SJAG_04229":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_04541":null,"SJAG_04888":null,"SJAG_04969":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome core complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0000503"],"synonyms":[{"name":"20S core complex","type":"narrow"},{"name":"20S proteasome","type":"narrow"},{"name":"PA28gamma-20S proteasome","type":"narrow"},{"name":"macropain","type":"exact"}],"termid":"GO:0005839","terms_by_termid":{"GO:0019773":null,"GO:0019774":null}}


id: PBO:0053777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1023","termid":"PBO:0053777"}


id: PBO:0079377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 12","termid":"PBO:0079377"}


id: GO:0009381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid at sites flanking regions of damaged DNA to which the Uvr ABC excinuclease complexes bind.","definition_xrefs":["PMID:15192705","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"excinuclease ABC activity","termid":"GO:0009381"}


id: MONDO:0017661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare parkinsonian syndrome due to genetic neurodegenerative disease (obsolete MONDO:0017661)","secondary_identifiers":["Orphanet:307055"],"termid":"MONDO:0017661","xrefs":{"Monarch":{"xref_id":"0017661"}}}


id: PBO:0067091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 127, pseudogene","termid":"PBO:0067091"}


id: GO:0075091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein alpha subunit (obsolete GO:0075091)","termid":"GO:0075091"}


id: GO:0004479
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77981],"is_not":false,"summary":null,"term":"GO:0004479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA.","definition_xrefs":["EC:2.1.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0003824","GO:0016740","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"methionyl-tRNA formyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:METHIONYL-TRNA-FORMYLTRANSFERASE-RXN","Reactome:R-HSA-5389841","GO:0070128","RHEA:24380","GO:0001718"],"synonyms":[{"name":"10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase activity","type":"related"},{"name":"N(10)-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"N-terminal peptidyl-methionine N-formylation","type":"related"},{"name":"N10-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"conversion of met-tRNAf to fmet-tRNA","type":"related"},{"name":"conversion of mitochondrial met-tRNAf to fmet-tRNA","type":"related"},{"name":"formylmethionyl-transfer ribonucleic synthetase activity","type":"related"},{"name":"methionyl ribonucleic formyltransferase activity","type":"related"},{"name":"methionyl-tRNA Met formyltransferase activity","type":"related"},{"name":"methionyl-tRNA transformylase activity","type":"related"},{"name":"methionyl-transfer RNA transformylase activity","type":"related"},{"name":"methionyl-transfer ribonucleate methyltransferase activity","type":"related"},{"name":"methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"mitochondrial N-terminal peptidyl-methionine N-formylation","type":"related"}],"termid":"GO:0004479","terms_by_termid":{"GO:0004479":null}}


id: PATO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000840 absolute auditory acuity value (obsolete PATO:0000840)","termid":"PATO:0000840"}


id: MONDO:0060554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertebral-cardiac-renal anomalies syndrome","termid":"MONDO:0020831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0006025"],"is_obsolete":false,"name":"vertebral, cardiac, renal, and limb defects syndrome 1","secondary_identifiers":["OMIM:617660","GARD:18508","UMLS:C4540004","MEDGEN:1621146"],"synonyms":[{"name":"3-hydroxyanthranilic acidemia","type":"related"},{"name":"VCRL1","type":"related"},{"name":"congenital NAD deficiency Disorder 1","type":"related"},{"name":"vertebral, cardiac, renal, and limb defects syndrome 1","type":"exact"}],"termid":"MONDO:0060554","xrefs":{"Monarch":{"xref_id":"0060554"}}}


id: MONDO:0006873
data:
  {"annotated_genes":["SJAG_04042","SJAG_04425","SJAG_05230","SJAG_04459","SJAG_01199","SJAG_01881","SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[86034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[85002,85003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[85614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[86434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[85253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"A condition produced by dietary or metabolic deficiency. The term includes all diseases caused by an insufficient supply of essential nutrients, i.e., protein (or amino acids), vitamins, and minerals. It also includes an inadequacy of calories. (From Dorland, 27th ed; Stedman, 25th ed)","definition_xrefs":["MESH:D003677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional disorder","termid":"MONDO:0005137"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01199":null,"SJAG_01881":null,"SJAG_03069":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"nutritional deficiency disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E40-E46","MedDRA:10046058","NCIT:C3669","ICD9:269.8","DOID:5113","EFO:1001067","ICD9:269.9","MEDGEN:1677627","SCTID:363246002","SCTID:70241007","UMLS:C4761312"],"synonyms":[{"name":"malnourished","type":"exact"},{"name":"malnutrition","type":"exact"}],"termid":"MONDO:0006873","terms_by_termid":{"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0010184":null,"MONDO:0012407":null,"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0006873"}}}


id: MONDO:0032821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, congenital, progressive, with scoliosis","secondary_identifiers":["UMLS:C5231417","DOID:0081351","MEDGEN:1684769","OMIM:618578"],"synonyms":[{"name":"MYOSCO","type":"exact"},{"name":"myopathy, congenital, progressive, with scoliosis","type":"exact"}],"termid":"MONDO:0032821","xrefs":{"Monarch":{"xref_id":"0032821"}}}


id: PATO:0001617
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's being distorted in form.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deformed","synonyms":[{"name":"disfigured","type":"related"},{"name":"distorted","type":"related"}],"termid":"PATO:0001617"}


id: FYPO:0007842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is absent.","definition_xrefs":["PMID:34019809","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abolished peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"abolished NAT activity","type":"related"},{"name":"abolished protein N-terminal acetyltransferase activity","type":"exact"},{"name":"peptide alpha-N-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007842"}


id: PR:O94272
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-aminobutyric acid receptor-associated protein-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.24c","secondary_identifiers":["UniProtKB:O94272"],"synonyms":[{"name":"Spom972h-GABARAPL2","type":"exact"},{"name":"autophagy-related ubiquitin-like modifier atg8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94272"}


id: GO:0047525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-hydroxydihydrodaidzein + NADP+ = 2'-hydroxydaidzein + NADPH + H+.","definition_xrefs":["EC:1.3.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2'-hydroxydaidzein reductase activity","secondary_identifiers":["RHEA:17145","MetaCyc:RXN-4502"],"synonyms":[{"name":"2'-hydroxy-2,3-dihydrodaidzein:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"2'-hydroxydihydrodaidzein:NADP(+) 2'-oxidoreductase activity","type":"related"},{"name":"2'-hydroxydihydrodaidzein:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"HDR activity","type":"related"},{"name":"NADPH:2'-hydroxydaidzein oxidoreductase activity","type":"related"}],"termid":"GO:0047525"}


id: PBO:0087729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SF3a splicing factor complex; required for spliceosome assembly","termid":"PBO:0087729"}


id: PBO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.30","termid":"PBO:0000268"}


id: MONDO:0017581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial infantile gigantism (obsolete MONDO:0017581)","secondary_identifiers":["Orphanet:300373"],"synonyms":[{"name":"X-LAG (X-linked acrogigantism)","type":"exact"},{"name":"hereditary infantile gigantism","type":"exact"},{"name":"hereditary pituitary hyperplasia","type":"exact"},{"name":"infantile gigantism due to pituitary hyperplasia","type":"exact"}],"termid":"MONDO:0017581","xrefs":{"Monarch":{"xref_id":"0017581"}}}


id: MONDO:0800348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 53","secondary_identifiers":["MEDGEN:461558","UMLS:C3150208"],"synonyms":[{"name":"RP53","type":"exact"}],"termid":"MONDO:0800348","xrefs":{"Monarch":{"xref_id":"0800348"}}}


id: GO:0031842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1 neuropeptide Y receptor binding","synonyms":[{"name":"type 1 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031842"}


id: MONDO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the squamous cells of the epidermis. Skin squamous cell carcinoma is most commonly found on sun-exposed areas. The majority of the tumors are well-differentiated.","definition_xrefs":["NCIT:C4819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin squamous cell carcinoma","secondary_identifiers":["DOID:3151","SCTID:254651007","UMLS:C0553723","ONCOTREE:CSCC","MEDGEN:107512"],"synonyms":[{"name":"CSCC","type":"related"},{"name":"cutaneous squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of skin","type":"exact"},{"name":"epidermoid carcinoma of the skin","type":"exact"},{"name":"epidermoid skin carcinoma","type":"exact"},{"name":"skin squamous cell cancer","type":"exact"},{"name":"skin squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma - skin","type":"exact"},{"name":"squamous cell carcinoma of skin","type":"exact"},{"name":"squamous cell carcinoma of the skin","type":"exact"},{"name":"squamous cell skin carcinoma","type":"exact"},{"name":"zone of skin squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002529","xrefs":{"Monarch":{"xref_id":"0002529"}}}


id: PBO:0071415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 21","termid":"PBO:0071415"}


id: PBO:0072114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 3","termid":"PBO:0072114"}


id: PBO:0088493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane trafficking protein, ER to Golgi Psg1","termid":"PBO:0088493"}


id: GO:0090252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a wing epithelium undergo directed movement and contribute to imaginal disc-derived morphogenesis.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium migration","termid":"GO:0090132"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium migration involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090252"}


id: PBO:0049065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 82","termid":"PBO:0049065"}


id: MONDO:0003041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mesenchymal chondrosarcoma occurring in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"mesenchymal chondrosarcoma","termid":"MONDO:0006853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric mesenchymal chondrosarcoma","secondary_identifiers":["UMLS:C1332982","DOID:4546","NCIT:C27374","MEDGEN:232063"],"synonyms":[{"name":"childhood mesenchymal chondrosarcoma","type":"exact"},{"name":"mesenchymal chondrosarcoma","type":"broad"},{"name":"mesenchymal chondrosarcoma of childhood","type":"exact"},{"name":"pediatric mesenchymal chondrosarcoma","type":"exact"}],"termid":"MONDO:0003041","xrefs":{"Monarch":{"xref_id":"0003041"}}}


id: PBO:0058901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12119","termid":"PBO:0058901"}


id: MONDO:0006953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mother develops antibodies against red blood cell Rhesus antigens. This may lead to potential fetal adverse outcomes such as anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood group incompatibility","termid":"MONDO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Rh isoimmunization","secondary_identifiers":["EFO:1001159","MedDRA:10039016","UMLS:C0035404","MEDGEN:11224","SCTID:44795003","DOID:4175"],"synonyms":[{"name":"Rh incompatibility affecting management of mother","type":"exact"}],"termid":"MONDO:0006953","xrefs":{"Monarch":{"xref_id":"0006953"}}}


id: GO:0071661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of granzyme B production","termid":"GO:0071661"}


id: PBO:0067011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 19, pseudogene","termid":"PBO:0067011"}


id: MONDO:0010835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pterygium colli-intellectual disability-digital anomalies syndrome is characterized by pterygium colli, digital anomalies (abnormal small thumbs, widened interphalangeal joints, and broad terminal phalanges), and craniofacial abnormalities (brachycephaly, epicanthic folds, angulated eyebrows, upward slanting of the palpebral fissures, ptosis, hypertelorism, and prominent low-set, posteriorly rotated ears). It has been described in a woman and her son, but the manifestations were much less severe in the mother. The son also had intellectual deficit. The inheritance is either X-linked dominant or autosomal dominant.","definition_xrefs":["Orphanet:2988"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterygium colli-intellectual disability-digital anomalies syndrome","secondary_identifiers":["MEDGEN:374001","MESH:C535831","OMIM:600159","UMLS:C1838562","SCTID:719256004","GARD:4568"],"synonyms":[{"name":"khalifa-Graham syndrome","type":"exact"},{"name":"pterygium colli and intellectual disability with facial and digital anomalies","type":"related"},{"name":"pterygium colli and mental retardation with facial and digital anomalies","type":"related"},{"name":"pterygium colli intellectual disability digital anomalies","type":"related"},{"name":"pterygium colli mental retardation digital anomalies","type":"related"}],"termid":"MONDO:0010835","xrefs":{"Monarch":{"xref_id":"0010835"}}}


id: PBO:0063025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 5","termid":"PBO:0063025"}


id: PBO:0072910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAN domain containing 3","termid":"PBO:0072910"}


id: GO:0043627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to estrogen","synonyms":[{"name":"response to 17alpha-ethynylestradiol","type":"related"},{"name":"response to estrogen stimulus","type":"exact"},{"name":"response to oestrogen stimulus","type":"exact"}],"termid":"GO:0043627"}


id: PBO:0029709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_low_pH","termid":"PBO:0029709"}


id: PBO:0004786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LYHRT homolog","termid":"PBO:0004786"}


id: MONDO:1010538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megacolon that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megacolon, non-human animal","termid":"MONDO:1010039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megacolon, cattle","secondary_identifiers":["OMIA:000629-9913"],"termid":"MONDO:1010538","xrefs":{"Monarch":{"xref_id":"1010538"}}}


id: PR:O74409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uricase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.09","secondary_identifiers":["UniProtKB:O74409"],"synonyms":[{"name":"Spom972h-Uox","type":"exact"},{"name":"urate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74409"}


id: PBO:0027850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclease_activity","termid":"PBO:0027850"}


id: MONDO:0100234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, cardiac rhythm disease characterized by ventricular fibrillation in the absence of any structural or functional heart disease, or known repolarization abnormalities. The presence of J waves is associated with a higher risk of nocturnal ventricular fibrillation events and a higher risk of recurrence.","definition_xrefs":["Orphanet:228140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular fibrillation","termid":"MONDO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"paroxysmal familial ventricular fibrillation","secondary_identifiers":["MEDGEN:83310","UMLS:C0340493","GARD:4227"],"synonyms":[{"name":"IVF","type":"exact"},{"name":"idiopathic ventricular fibrillation","type":"exact"},{"name":"idiopathic ventricular fibrillation, non Brugada type","type":"exact"},{"name":"paroxysmal familial ventricular fibrillation","type":"exact"},{"name":"paroxysmal familial ventricular fibrillation (disorder)","type":"exact"},{"name":"paroxysmal ventricular fibrillation","type":"exact"},{"name":"ventricular fibrillation, paroxysmal familial","type":"exact"}],"termid":"MONDO:0100234","xrefs":{"Monarch":{"xref_id":"0100234"}}}


id: PBO:0063677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 1","termid":"PBO:0063677"}


id: MONDO:0700209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Strongylida infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic disease, non-human animal","termid":"MONDO:0024969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Strongylida infectious disease, non-human animal","termid":"MONDO:0700209","xrefs":{"Monarch":{"xref_id":"0700209"}}}


id: PBO:0090177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-cysteine ligase regulatory subunit Gcs2","termid":"PBO:0090177"}


id: FYPO:0006212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates but dies before forming a germ tube or dividing, when spore germination takes place under conditions of copper ion starvation. Such spores exit dormancy and undergo isotropic swelling but the spore wall does not rupture and no germ tube emerges.","definition_xrefs":["PMID:28572514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, before germ tube formation","termid":"FYPO:0006211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, before germ tube formation, during copper ion starvation","synonyms":[{"name":"inviable after spore germination, before germ tube formation, during cellular response to copper ion starvation","type":"exact"},{"name":"inviable after spore germination, before germ tube formation, during copper starvation","type":"exact"},{"name":"inviable following spore germination, before germ tube formation, during copper ion starvation","type":"exact"},{"name":"inviable germinated spore, without germ tube formation, during copper ion starvation","type":"exact"},{"name":"lethal after spore germination, before germ tube formation, during copper ion starvation","type":"exact"}],"termid":"FYPO:0006212"}


id: PR:Q9P802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis18 gene.","definition_xrefs":["UniProtKB:Q9P802","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein mis18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.12","synonyms":[{"name":"Spom972h-mis18","type":"exact"}],"termid":"PR:Q9P802"}


id: PBO:0086040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in DNA repair","termid":"PBO:0086040"}


id: GO:0016598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway.","definition_xrefs":["PMID:17896865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein arginylation","secondary_identifiers":["GO:0019130"],"synonyms":[{"name":"protein amino acid arginylation","type":"exact"}],"termid":"GO:0016598"}


id: PBO:0082945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic inorganic pyrophosphatase (PPase); homodimer that catalyzes the rapid exchange of oxygens from Pi with water, highly expressed and essential for viability, active-site residues show identity to those from E. coli PPase","termid":"PBO:0082945"}


id: MONDO:0022694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral calcifications opalescent teeth phosphaturia","termid":"MONDO:0022694","xrefs":{"Monarch":{"xref_id":"0022694"}}}


id: PATO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in exudate by virtue of the bearer's containing fibrin.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinopurulent","termid":"PATO:0002116"}


id: PBO:0058116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4418","termid":"PBO:0058116"}


id: MONDO:0958199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Lafora disease in which the cause of the disease is a variation in the EPM2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lafora disease","termid":"MONDO:0009697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"myoclonic epilepsy of Lafora 1","secondary_identifiers":["OMIM:254780","UMLS:C5848203","MEDGEN:1844054"],"termid":"MONDO:0958199","xrefs":{"Monarch":{"xref_id":"0958199"}}}


id: GO:0032494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["ISBN:0721601464","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to peptidoglycan","termid":"GO:0032494"}


id: PBO:0011164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex subunit, GTPase regulator Vps3 (predicted)","termid":"PBO:0011164"}


id: GO:0048343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a paraxial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell differentiation","termid":"GO:0048342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}


id: FYECO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ammonium iron(2+) sulfate (ferrous ammonium sulfate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ammonium iron(2+) sulfate","synonyms":[{"name":"+ ferrous ammonium sulfate (anhydrous)","type":"related"}],"termid":"FYECO:0000302"}


id: PBO:0055440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2871","termid":"PBO:0055440"}


id: PBO:0027719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_lysine_methylation","termid":"PBO:0027719"}


id: MONDO:0032844
data:
  {"annotated_genes":["SJAG_01166"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86600],"is_not":false,"summary":null,"term":"MONDO:0032844"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infantile liver failure","termid":"MONDO:0000023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01166":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"infantile liver failure syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231437","OMIM:618641","GARD:16483","MEDGEN:1684678"],"synonyms":[{"name":"ILFS3","type":"related"},{"name":"INFANTILE LIVER FAILURE SYNDROME 3","type":"related"}],"termid":"MONDO:0032844","terms_by_termid":{"MONDO:0032844":null},"xrefs":{"Monarch":{"xref_id":"0032844"}}}


id: GO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a XCR1 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"XCR1 chemokine receptor binding","synonyms":[{"name":"XCR1 chemokine receptor ligand","type":"narrow"},{"name":"lymphotactin receptor binding","type":"exact"}],"termid":"GO:0031738"}


id: PR:O43015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2G2.17c gene.","definition_xrefs":["UniProtKB:O43015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase C2G2.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.17c","synonyms":[{"name":"Spom972h-SPBC2G2.17c","type":"exact"}],"termid":"PR:O43015"}


