# terms

id: SO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physically clustered group of two or more genes in a particular genome that together encode a biosynthetic pathway for the production of a specialized metabolite (including its chemical variants).","definition_xrefs":["PMID:26284661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biosynthetic_gene_cluster","synonyms":[{"name":"Metabolic gene cluster","type":"exact"}],"termid":"SO:0002357"}


id: PBO:0070990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 14","termid":"PBO:0070990"}


id: RO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are reduced or eliminated by the presence of the entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_ameliorated_by","termid":"RO:0003310"}


id: GO:0019385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including acetate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanogenesis, from acetate","secondary_identifiers":["MetaCyc:METH-ACETATE-PWY"],"synonyms":[{"name":"methane biosynthesis from acetate","type":"exact"},{"name":"methane biosynthetic process from acetate","type":"exact"}],"termid":"GO:0019385"}


id: PBO:0045811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 1","termid":"PBO:0045811"}


id: FYPO:0005354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at the RTS1 barrier in the mating type region is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"normal site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"normal site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005354"}


id: PBO:0068410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 1","termid":"PBO:0068410"}


id: PBO:0053900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: PBO:0090930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (calcipressin) regulatory subunit Rcn1","termid":"PBO:0090930"}


id: PBO:0084927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 5'-end-capping quality-control protein; has distributive, 5'-3' exoRNase activity; involved in the decapping of nicotinamide adenine dinucleotide (NAD) capped nuclear NAD-RNAs; similar to Rai1p","termid":"PBO:0084927"}


id: PBO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028569"}


id: MONDO:0022025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"},{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"boylan dew greco syndrome","secondary_identifiers":["MEDGEN:419407","UMLS:C2931419","MESH:C537083","GARD:954"],"synonyms":[{"name":"congenital hypomyelination neuropathy with arthrogryposis multiplex congenita","type":"related"}],"termid":"MONDO:0022025","xrefs":{"Monarch":{"xref_id":"0022025"}}}


id: GO:1905150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:24198377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of voltage-gated sodium channel activity","synonyms":[{"name":"regulation of voltage gated sodium channel activity","type":"exact"},{"name":"regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"regulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905150"}


id: GO:0099174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a presynapse.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"presynapse organization","termid":"GO:0099172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynapse organization","synonyms":[{"name":"regulation of presynapse organisation","type":"exact"},{"name":"regulation of presynapse organization and biogenesis","type":"related"},{"name":"regulation of presynapse structure","type":"exact"}],"termid":"GO:0099174"}


id: PR:000027986
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8","termid":"PR:000028197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-cdc8","type":"exact"}],"termid":"PR:000027986"}


id: GO:0004140
data:
  {"annotated_genes":["SJAG_04288","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70778,70973],"is_not":false,"summary":null,"term":"GO:0004140"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-dephospho-CoA + ATP = ADP + CoA + 2 H+.","definition_xrefs":["EC:2.7.1.24","RHEA:18245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04288":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"dephospho-CoA kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00130","MetaCyc:DEPHOSPHOCOAKIN-RXN","Reactome:R-HSA-196773","Reactome:R-HSA-9837337"],"synonyms":[{"name":"3'-dephospho-CoA kinase activity","type":"related"},{"name":"ATP:dephospho-CoA 3'-phosphotransferase activity","type":"related"},{"name":"dephosphocoenzyme A kinase (phosphorylating)","type":"related"},{"name":"dephosphocoenzyme A kinase activity","type":"related"}],"termid":"GO:0004140","terms_by_termid":{"GO:0004140":null}}


id: GO:0021694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar Purkinje cell layer. This process pertains to the initial formation of a structure from unspecified parts. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:jid","ISBN:0838580343","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer formation","termid":"GO:0021694"}


id: PBO:0051299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-35 (pseudogene)","termid":"PBO:0051299"}


id: PBO:0114521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex WD repeat subunit C, Pcf3","termid":"PBO:0114521"}


id: GO:0008025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The diazepam binding inhibitor is a 10kDa 86-residue polypeptide that acts as an endogenous ligand for a mitochondrial receptor (formerly regarded as a peripheral benzodiazepine binding site) in steroidogenic cells and regulates stimulation of steroidogenesis by tropic hormones. It also binds to the GABA-A receptor and modulates glucose-dependent insulin secretion and synthesis of acyl-CoA esters.","definition_xrefs":["PMID:11883709","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete diazepam binding inhibitor activity (obsolete GO:0008025)","synonyms":[{"name":"DBI","type":"exact"},{"name":"diazepam binding inhibitor activity","type":"exact"},{"name":"diazepam-binding inhibitor activity","type":"exact"}],"termid":"GO:0008025"}


id: GO:1902911
data:
  {"annotated_genes":["SJAG_02057","SJAG_02404","SJAG_03699","SJAG_00973","SJAG_00512","SJAG_01000","SJAG_04420","SJAG_04280","SJAG_00150","SJAG_00100","SJAG_04614","SJAG_04502","SJAG_03421","SJAG_02374","SJAG_01456","SJAG_02183","SJAG_03206","SJAG_01149","SJAG_01401","SJAG_03048","SJAG_03160","SJAG_03802","SJAG_01274","SJAG_04486","SJAG_01716","SJAG_03501","SJAG_03061","SJAG_03695","SJAG_01587","SJAG_01799","SJAG_01245","SJAG_02441","SJAG_03602","SJAG_00995","SJAG_01207","SJAG_03931","SJAG_00901","SJAG_01213","SJAG_04368","SJAG_03967","SJAG_03618","SJAG_04140","SJAG_04312","SJAG_04232","SJAG_05017","SJAG_05978","SJAG_03591","SJAG_03789","SJAG_01581","SJAG_00439","SJAG_02275","SJAG_00142","SJAG_00758","SJAG_02785","SJAG_03525"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70434,72226,71864,79457,117617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990316"},{"annotations":[70729,72928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005952"},{"annotations":[115809,103272,98780,98207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110115"},{"annotations":[110706,95561,79113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[77950,73693,71140,76471,87959,78151,104112,105492,70246,71295,69716,106056,74561,108153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000307"},{"annotations":[75249,111827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031431"},{"annotations":[118361,64201,94716,91451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[79376,118035,69731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031588"},{"annotations":[108676,108833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[118091,95015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009365"},{"annotations":[73773,77866,75664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005956"},{"annotations":[69980,74045,78368,108782,91930,114635,69678,75981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[111879,60580,76064],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of protein kinase activity.","definition_xrefs":["PMID:24606918","GOC:bhm","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00150":null,"SJAG_00439":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00973":null,"SJAG_00995":null,"SJAG_01000":null,"SJAG_01149":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01456":null,"SJAG_01581":null,"SJAG_01587":null,"SJAG_01716":null,"SJAG_01799":null,"SJAG_02057":null,"SJAG_02183":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02404":null,"SJAG_02441":null,"SJAG_02785":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03160":null,"SJAG_03206":null,"SJAG_03421":null,"SJAG_03501":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03602":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03789":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03967":null,"SJAG_04140":null,"SJAG_04232":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04486":null,"SJAG_04502":null,"SJAG_04614":null,"SJAG_05017":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein kinase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1902911","terms_by_termid":{"GO:0000307":null,"GO:0005675":null,"GO:0005952":null,"GO:0005956":null,"GO:0009365":null,"GO:0031431":null,"GO:0031588":null,"GO:0070691":null,"GO:0070692":null,"GO:0070985":null,"GO:0090730":null,"GO:0110115":null,"GO:1990316":null}}


id: PATO:0000543
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000543 light intensivity sensitivity value (obsolete PATO:0000543)","termid":"PATO:0000543"}


id: GO:0180006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-serine (consensus YSPTSPS)(position 2) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0140096","GO:0004721","GO:0016787"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain S2 phosphatase activity","type":"exact"}],"termid":"GO:0180006"}


id: GO:0051703
data:
  {"annotated_genes":["SJAG_03484","SJAG_03802","SJAG_03473","SJAG_02380","SJAG_01975","SJAG_00910","SJAG_04720","SJAG_01253","SJAG_04723","SJAG_04191","SJAG_00239","SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76284,69613,76751,78222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000128"},{"annotations":[103342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[106051,103343],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[108560,113889,105697,111172,115952,108437],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process in which an organism has an effect on an organism of the same species.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null,"SJAG_04723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in intraspecies interaction between organisms","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"intraspecies interaction between organisms","type":"exact"},{"name":"intraspecies interaction with other organisms","type":"exact"}],"termid":"GO:0051703","terms_by_termid":{"GO:0000128":null,"GO:0036349":null,"GO:0060257":null,"GO:1900735":null}}


id: PBO:0069071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 318, pseudogene","termid":"PBO:0069071"}


id: PBO:0034460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_thin_stable_microtubule_bundle","termid":"PBO:0034460"}


id: PBO:0072006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 8","termid":"PBO:0072006"}


id: PBO:0047007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A10","termid":"PBO:0047007"}


id: PBO:0058210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4502","termid":"PBO:0058210"}


id: PBO:0076113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX18 antisense RNA 1 (head to head)","termid":"PBO:0076113"}


id: PBO:0038724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 19","termid":"PBO:0038724"}


id: MOD:00654
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a sulfanyl group with a methylsulfanyl group","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"S-methylated residue","synonyms":[{"name":"SMeRes","type":"exact"}],"termid":"MOD:00654"}


id: MONDO:0018975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinically heterogeneous, neurocutaneous genetic disorder characterized by cafe-au-lait spots, iris Lisch nodules, axillary and inguinal freckling, and multiple neurofibromas.","definition_xrefs":["Orphanet:636"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"obsolete Moyamoya syndrome (obsolete MONDO:0018792)","termid":"MONDO:0018792"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"excluded_subClassOf","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"RASopathy","termid":"MONDO:0021060"},{"relation_name":"is_a","term_name":"neurofibromatosis","termid":"MONDO:0021061"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis type 1","secondary_identifiers":["GARD:7866","MESH:C538607","NORD:1502","NANDO:2201003","DECIPHER:15","NANDO:1200226","MESH:D009456","icd11.foundation:337970533","ICD9:237.71","MEDGEN:18013","NCIT:C3273","UMLS:C0027831","NANDO:1200225","NANDO:2100287","MedDRA:10047712","OMIM:162200","SCTID:92824003","DOID:0111253"],"synonyms":[{"name":"NF1","type":"exact"},{"name":"Neurofibromatosis 1","type":"exact"},{"name":"Nf1-Microdeletion syndrome","type":"exact"},{"name":"Recklinghausen's disease","type":"related"},{"name":"Von Recklinghausen disease","type":"related"},{"name":"neurofibromatosis","type":"broad"},{"name":"neurofibromatosis 1","type":"exact"},{"name":"neurofibromatosis type 1","type":"exact"},{"name":"neurofibromatosis type 1 microdeletion syndrome","type":"related"},{"name":"neurofibromatosis type i","type":"exact"},{"name":"neurofibromatosis, peripheral type","type":"related"},{"name":"neurofibromatosis, type 1","type":"exact"},{"name":"neurofibromatosis, type I","type":"related"},{"name":"nonmosaic NF1","type":"exact"},{"name":"nonmosaic neurofibromatosis type 1","type":"exact"},{"name":"peripheral neurofibromatosis","type":"exact"},{"name":"type 1 neurofibromatosis","type":"related"},{"name":"von Reklinghausen disease","type":"related"}],"termid":"MONDO:0018975","xrefs":{"Monarch":{"xref_id":"0018975"}}}


id: MONDO:0013057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 12, susceptibility to","secondary_identifiers":["OMIM:612950","DOID:0111291","UMLS:C2751854","MEDGEN:414124"],"synonyms":[{"name":"PSORS12","type":"exact"},{"name":"psoriasis 12, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 12","type":"exact"}],"termid":"MONDO:0013057","xrefs":{"Monarch":{"xref_id":"0013057"}}}


id: PBO:0071118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 120","termid":"PBO:0071118"}


id: PBO:0070801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 31","termid":"PBO:0070801"}


id: PBO:0059803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 29","termid":"PBO:0059803"}


id: GO:0051482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the concentration of calcium ions in the cytosol that occurs as part of a PLC-activating G protein-coupled receptor signaling pathway. G-protein-activated PLC hydrolyses phosphatidylinositol-bisphosphate (PIP2) to release diacylglycerol (DAG) and inositol trisphosphate (IP3). IP3 then binds to calcium release channels in the endoplasmic reticulum (ER) to trigger calcium ion release into the cytosol.","definition_xrefs":["GOC:ai","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway (obsolete GO:0051482)","synonyms":[{"name":"elevation of calcium ion concentration in cytoplasm during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of calcium ion concentration in cytosol during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytosolic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger","type":"exact"},{"name":"elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"},{"name":"positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"}],"termid":"GO:0051482"}


id: PBO:0063664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins inositol deacylase 1","termid":"PBO:0063664"}


id: GO:0032342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance.","definition_xrefs":["PMID:16527843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone biosynthetic process","termid":"GO:0006700"},{"relation_name":"is_a","term_name":"mineralocorticoid biosynthetic process","termid":"GO:0006705"},{"relation_name":"is_a","term_name":"aldosterone metabolic process","termid":"GO:0032341"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aldosterone biosynthetic process","termid":"GO:0032342"}


id: PBO:0050565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H1","termid":"PBO:0050565"}


id: PBO:0087661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Npr2p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and resulting in inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; homolog of human tumor suppressor NPRL2","termid":"PBO:0087661"}


id: MONDO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the lip.","definition_xrefs":["NCIT:C79545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lip disorder","termid":"MONDO:0004748"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cheilitis","secondary_identifiers":["DOID:1762","HP:0100825","icd11.foundation:482914030","MEDGEN:3349","MESH:D002613","SCTID:7847004","UMLS:C0007971"],"synonyms":[{"name":"inflammation of lip","type":"exact"},{"name":"lip inflammation","type":"exact"}],"termid":"MONDO:0002102","xrefs":{"Monarch":{"xref_id":"0002102"}}}


id: GO:0061643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of axon","termid":"GO:0061643"}


id: PBO:0054962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2376","termid":"PBO:0054962"}


id: MONDO:0005738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by tapeworm larvae of Echinococcus. It affects livestock and humans. It is characterized by the formation of hydatid cysts mainly in the liver, lungs, spleen, and kidneys. Rupture of the cysts may lead to shock.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"echinococcosis","secondary_identifiers":["icd11.foundation:1456802165","DOID:1496","ICD9:122","SCTID:74942003","EFO:0007245","UMLS:C0013502","ICD9:122.9","MESH:D004443","NCIT:C84682","MEDGEN:4438","ICD10CM:B67"],"synonyms":[{"name":"Echinococcus caused disease or disorder","type":"exact"},{"name":"Echinococcus disease or disorder","type":"exact"},{"name":"Echinococcus infectious disease","type":"exact"},{"name":"echinococcal disease","type":"narrow"},{"name":"echinococciasis","type":"related"},{"name":"echinococcosis","type":"exact"},{"name":"echinococcosis of liver","type":"exact"},{"name":"echinococcosis, unspecified, of liver","type":"narrow"},{"name":"echinococcus disease","type":"related"},{"name":"hepatic echinococcosis","type":"narrow"},{"name":"hydatid disease","type":"narrow"},{"name":"hydatidosis","type":"narrow"},{"name":"liver echinococcus","type":"exact"},{"name":"pulmonary echinococcosis","type":"narrow"}],"termid":"MONDO:0005738","xrefs":{"Monarch":{"xref_id":"0005738"}}}


id: MONDO:0032770
data:
  {"annotated_genes":["SJAG_03579","SJAG_02869","SJAG_01016"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86918,86919,86920],"is_not":false,"summary":null,"term":"MONDO:0032770"}]},"cv_name":"mondo","definition":"Any BAFopathy in which the cause of the disease is a mutation in the ACTL6B gene.","definition_xrefs":["PMID:30580808","MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01016":null,"SJAG_02869":null,"SJAG_03579":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with severe speech and ambulation defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1682234","OMIM:618470","GARD:18518","UMLS:C5193115"],"synonyms":[{"name":"ACTL6B-related BAFopathy","type":"exact"},{"name":"IDDSSAD","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH SEVERE SPEECH AND AMBULATION DEFECTS","type":"related"}],"termid":"MONDO:0032770","terms_by_termid":{"MONDO:0032770":null},"xrefs":{"Monarch":{"xref_id":"0032770"}}}


id: SO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that does not lead to any change in the amino acid sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonymous","termid":"SO:0001815"}


id: MONDO:0020757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by an aura that includes motor weakness and the absence of family history.","definition_xrefs":["NCIT:C117011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial or sporadic hemiplegic migraine","termid":"MONDO:0018925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic hemiplegic migraine","secondary_identifiers":["UMLS:C1832903","MEDGEN:318737","icd11.foundation:1303340532"],"synonyms":[{"name":"sporadic hemiplegic migraine","type":"exact"}],"termid":"MONDO:0020757","xrefs":{"Monarch":{"xref_id":"0020757"}}}


id: PR:O13794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01509","PANTHER:PTHR11203:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoribonuclease ysh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.16c","secondary_identifiers":["UniProtKB:O13794"],"synonyms":[{"name":"Spom972h-CPSF3","type":"exact"},{"name":"mRNA 3'-end-processing protein ysh1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13794"}


id: GO:0039588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the normal processing and presentation of a peptide antigen on its cell surface in association with an MHC protein complex.","definition_xrefs":["VZ:815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host adaptive immune response","termid":"GO:0039504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host antigen processing and presentation","synonyms":[{"name":"suppression by virus of host antigen processing and presentation","type":"narrow"}],"termid":"GO:0039588"}


id: PBO:0086663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified based on comparison to related yeast species; mCherry fusion protein localizes to the vacuole","termid":"PBO:0086663"}


id: PBO:0055292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2719","termid":"PBO:0055292"}


id: GO:1900386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of flavonol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of flavonoid biosynthetic process","termid":"GO:0009963"},{"relation_name":"is_a","term_name":"regulation of flavonol biosynthetic process","termid":"GO:1900384"},{"relation_name":"positively_regulates","term_name":"flavonol biosynthetic process","termid":"GO:0051555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flavonol biosynthetic process","synonyms":[{"name":"activation of flavonol biosynthetic process","type":"narrow"},{"name":"up regulation of flavonol biosynthetic process","type":"exact"},{"name":"up-regulation of flavonol biosynthetic process","type":"exact"},{"name":"upregulation of flavonol biosynthetic process","type":"exact"}],"termid":"GO:1900386"}


id: GO:1900763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of averantin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"averantin metabolic process","termid":"GO:1900761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"averantin biosynthetic process","synonyms":[{"name":"averantin anabolism","type":"exact"},{"name":"averantin biosynthesis","type":"exact"},{"name":"averantin formation","type":"exact"},{"name":"averantin synthesis","type":"exact"}],"termid":"GO:1900763"}


id: PBO:0113804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, phosphate quantity regulator Pqr1/Spx1","termid":"PBO:0113804"}


id: MONDO:0007323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chondronectin","secondary_identifiers":["OMIM:118670","UMLS:C3887693","MEDGEN:854532"],"synonyms":[{"name":"Chondronectin","type":"exact"}],"termid":"MONDO:0007323","xrefs":{"Monarch":{"xref_id":"0007323"}}}


id: GO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gonadotropin-releasing hormone to initiate a change in cell activity. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"gonadotropin-releasing hormone receptor activity","synonyms":[{"name":"GnRH receptor activity","type":"exact"},{"name":"gonadotrophin-releasing hormone receptor activity","type":"exact"}],"termid":"GO:0004968"}


id: PBO:0054304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1696","termid":"PBO:0054304"}


id: PBO:0034418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_indirect_input_(obsolete_has_indirect_input)","termid":"PBO:0034418"}


id: PBO:0091731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric small non-coding RNA","termid":"PBO:0091731"}


id: FYPO:0002731
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119023],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"mononucleate","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mononucleate cell","type":"exact"}],"termid":"FYPO:0002731","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0035977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of sugar residues from a glycosylated protein that contributes to the breakdown of a glycoprotein.","definition_xrefs":["GOC:bf","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglycosylation","termid":"GO:0006517"},{"relation_name":"part_of","term_name":"glycoprotein catabolic process","termid":"GO:0006516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein deglycosylation involved in glycoprotein catabolic process","termid":"GO:0035977"}


id: PBO:0049196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor delta type subunit 2","termid":"PBO:0049196"}


id: FYPO:0003767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of crossover junction endodeoxyribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased endodeoxyribonuclease activity","termid":"FYPO:0002037"},{"relation_name":"is_a","term_name":"abnormal crossover junction endodeoxyribonuclease activity","termid":"FYPO:0003666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0005447"],"is_obsolete":false,"name":"decreased crossover junction endodeoxyribonuclease activity","synonyms":[{"name":"reduced crossover junction endodeoxyribonuclease activity","type":"exact"}],"termid":"FYPO:0003767"}


id: GO:0048438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a floral whorl over time, from its formation to the mature structure. A floral whorl is a circular arrangement of parts of a flower arising from a stem of a plant.","definition_xrefs":["GOC:go_curators","PO:0025023","GOC:tb","GOC:PO_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl development","secondary_identifiers":["GO:0048413"],"synonyms":[{"name":"collective phyllome structure development","type":"broad"}],"termid":"GO:0048438"}


id: PBO:0050176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 32","termid":"PBO:0050176"}


id: GO:0140447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of a peptide bond in a precursor form of a cytokine, resulting in the mature (active) form of the cytokine.","definition_xrefs":["PMID:29247995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"},{"relation_name":"part_of","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"cytokine precursor processing","synonyms":[{"name":"interleukin maturation","type":"narrow"},{"name":"interleukin processing","type":"narrow"}],"termid":"GO:0140447"}


id: GO:0007026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"negative regulation of microtubule depolymerization","synonyms":[{"name":"down regulation of microtubule depolymerization","type":"exact"},{"name":"down-regulation of microtubule depolymerization","type":"exact"},{"name":"downregulation of microtubule depolymerization","type":"exact"},{"name":"inhibition of microtubule depolymerization","type":"narrow"},{"name":"microtubule rescue","type":"narrow"},{"name":"microtubule stabilization","type":"exact"},{"name":"negative regulation of microtubule catastrophe","type":"narrow"},{"name":"negative regulation of microtubule disassembly","type":"exact"}],"termid":"GO:0007026"}


id: PBO:0058952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKLN1 antisense RNA","termid":"PBO:0058952"}


id: GO:0061366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behaviour of an organism as a result of a chemical pain stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemosensory behavior","termid":"GO:0007635"},{"relation_name":"is_a","term_name":"behavioral response to pain","termid":"GO:0048266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to chemical pain","termid":"GO:0061366"}


id: PBO:0003562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit Dpb4","termid":"PBO:0003562"}


id: MONDO:0020236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Partial or complete displacement of the crystalline lens from its normal position in the eye.","definition_xrefs":["NCIT:C125484"],"gene_count":0,"genotype_count":0,"name":"obsolete lens position anomaly (obsolete MONDO:0020236)","secondary_identifiers":["HP:0001083","Orphanet:98653"],"synonyms":[{"name":"ectopia lentis","type":"exact"}],"termid":"MONDO:0020236","xrefs":{"Monarch":{"xref_id":"0020236"}}}


id: MONDO:0009476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atresia of small intestine is a special form of intestinal atresia with absence of mesentery, which is most likely due to an intrauterine intestinal vascular accident. Newborns are usually preterm infants with low birth-weights, that encounter feeding difficulties (including vomiting with initial feeds, which may later worsened and the abdomen becomes progressively distended) as well as failure to thrive. Affected children present disrupted bowel loops assuming a spiral configuration resembling an 'apple peel' and may have less than half of the normal length of the small bowel and a physiologically short bowel. Atresia of small intestine is characterized by jejunal atresia near the ligament of Treitz, foreshortened bowel, and a large mesenteric gap. The bowel distal to the atresia is precariously supplied. Atresia of small intestine may be a manifestation of cystic fibrosis. The most important cause of mortality is short bowel syndrome, encountered in 65% of cases.","definition_xrefs":["Orphanet:1201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"atresia of small intestine","secondary_identifiers":["MEDGEN:78590","UMLS:C0266172","icd11.foundation:1949256262","MedDRA:10010626","NCIT:C98828","OMIM:243600","NORD:1309","GARD:140","MESH:C538260"],"synonyms":[{"name":"APSB","type":"related"},{"name":"Jejunal Atresia","type":"exact"},{"name":"Jejunoileal atresia","type":"exact"},{"name":"apple peel small bowel syndrome","type":"related"},{"name":"apple peel syndrome","type":"exact"},{"name":"apple-peel intestinal atresia","type":"related"},{"name":"atresia of the small intestine","type":"exact"},{"name":"congenital atresia of the small intestine","type":"related"},{"name":"congenital small intestine atresia","type":"exact"},{"name":"familial apple peel jejunal atresia","type":"related"},{"name":"intestinal atresia type IIIb","type":"exact"},{"name":"jejunal atresia","type":"exact"},{"name":"small intestinal atresia","type":"exact"},{"name":"small intestine atresia","type":"exact"}],"termid":"MONDO:0009476","xrefs":{"Monarch":{"xref_id":"0009476"}}}


id: MONDO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess of the cornea.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deep keratitis","termid":"MONDO:0004903"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"corneal infection","termid":"MONDO:0023865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal abscess","secondary_identifiers":["UMLS:C0155091","icd11.foundation:485862779","ICD9:370.55","MEDGEN:56351","SCTID:64366002","DOID:11543","NCIT:C26969"],"termid":"MONDO:0001307","xrefs":{"Monarch":{"xref_id":"0001307"}}}


id: PBO:0067811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 113","termid":"PBO:0067811"}


id: GO:0044007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of an organism from a host to another host or from a host to another place in the environment. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete dissemination or transmission of symbiont from host (obsolete GO:0044007)","synonyms":[{"name":"dissemination or transmission of organism from host","type":"exact"}],"termid":"GO:0044007"}


id: MONDO:0009259
data:
  {"annotated_genes":["SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85663],"is_not":false,"summary":null,"term":"MONDO:0009259"}]},"cv_name":"mondo","definition":"Gamma-glutamylcysteine synthetase deficiency is principally characterized by hemolytic anemia, (usually rather mild), however, the presence of neurological symptoms has also been reported.","definition_xrefs":["Orphanet:33574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019241","MONDO:0005066"],"is_obsolete":false,"name":"gamma-glutamylcysteine synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:347272","UMLS:C1856603","OMIM:230450","MESH:C565557","ICD9:270.8","GARD:16631","DOID:0111681","SCTID:36799008"],"synonyms":[{"name":"gamma-glutamylcysteine synthetase deficiency, hemolytic anaemia due to","type":"exact"},{"name":"gamma-glutamylcysteine synthetase deficiency, hemolytic anemia due to","type":"exact"},{"name":"glutamate-cysteine ligase deficiency","type":"exact"},{"name":"hemolytic anaemia due to gamma-glutamylcysteine synthetase deficiency","type":"exact"},{"name":"hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency","type":"exact"},{"name":"inborn error of glutamate-cysteine ligase activity","type":"exact"},{"name":"inborn glutamate-cysteine ligase activity disorder","type":"exact"},{"name":"rare inborn error of glutamate-cysteine ligase activity","type":"exact"}],"termid":"MONDO:0009259","terms_by_termid":{"MONDO:0009259":null},"xrefs":{"Monarch":{"xref_id":"0009259"}}}


id: GO:0019032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral glycoprotein (obsolete GO:0019032)","synonyms":[{"name":"viral glycoprotein","type":"exact"}],"termid":"GO:0019032"}


id: PBO:0028103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_galactose_carbon_source","termid":"PBO:0028103"}


id: GO:0052327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the symbiont organism mediated by a substance secreted by the other organism by a type II secretion system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via protein secreted by type II secretion system (obsolete GO:0052327)","synonyms":[{"name":"interaction with symbiont via protein secreted by type II secretion system","type":"exact"}],"termid":"GO:0052327"}


id: GO:1990188
data:
  {"annotated_genes":["SJAG_00471","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105186,115803],"is_not":false,"summary":null,"term":"GO:1990188"}]},"cv_name":"molecular_function","definition":"Binding to euchromatin, a dispersed and relatively uncompacted form of chromatin.","definition_xrefs":["GOC:vw","PMID:22431512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"euchromatin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990188","terms_by_termid":{"GO:1990188":null}}


id: PBO:0051825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 2 binding protein 1","termid":"PBO:0051825"}


id: PR:O74349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase listerin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12389:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase listerin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.09c","secondary_identifiers":["UniProtKB:O74349"],"synonyms":[{"name":"SPBC21D10.09c","type":"related"},{"name":"Spom972h-LTN1","type":"exact"}],"termid":"PR:O74349"}


id: PATO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000090 relative sensitivity (obsolete PATO:0000090)","termid":"PATO:0000090"}


id: PBO:0074286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 1","termid":"PBO:0074286"}


id: PBO:0062647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 12 subfamily D member 1 (gene/pseudogene)","termid":"PBO:0062647"}


id: GO:0036418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mycolate outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:md"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mycolate outer membrane (obsolete GO:0036418)","synonyms":[{"name":"intrinsic to MOM","type":"exact"},{"name":"intrinsic to mycolate outer membrane","type":"narrow"},{"name":"intrinsic to mycomembrane","type":"exact"}],"termid":"GO:0036418"}


id: PBO:0090907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag101","termid":"PBO:0090907"}


id: MONDO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The use of a drug for a reason other than which it was intended or in a manner or in quantities other than directed.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance-related disorder","termid":"MONDO:0002494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substance abuse","secondary_identifiers":["ICD9:305.90","DOID:302","UMLS:C0740858","MEDGEN:152849","SCTID:66214007"],"termid":"MONDO:0002491","xrefs":{"Monarch":{"xref_id":"0002491"}}}


id: FYPO:0005248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tellurite (TeO3(2-)) ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to tellurite","synonyms":[{"name":"resistance to tellurite during mitotic cell cycle","type":"related"},{"name":"resistance to tellurite during vegetative growth","type":"exact"},{"name":"resistance to tellurite ions","type":"exact"},{"name":"resistant to tellurite","type":"exact"}],"termid":"FYPO:0005248"}


id: PBO:0058898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12116","termid":"PBO:0058898"}


id: MONDO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the organism Candida.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidiasis","secondary_identifiers":["ICD9:112.9","DOID:1508","ICD9:112","ICD9:112.89","UMLS:C0006840","NCIT:C26711","MEDGEN:14299","MESH:D002177","ICD10CM:B37","SCTID:78048006"],"synonyms":[{"name":"Candida <Debaryomycetaceae> infection","type":"exact"},{"name":"Candida infection","type":"exact"},{"name":"Candidosis","type":"exact"},{"name":"disseminated candidiasis","type":"narrow"},{"name":"infections, Candida <Debaryomycetaceae>","type":"related"},{"name":"systemic candidiasis","type":"narrow"},{"name":"thrush","type":"exact"}],"termid":"MONDO:0002026","xrefs":{"Monarch":{"xref_id":"0002026"}}}


id: PBO:0078133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 13-1","termid":"PBO:0078133"}


id: FYECO:0000162
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119390,119250,119295,119391,119392,119393,119394,119015,119379,119380,119381,119382,119383,119384,119385,119395,119396,119386,119052,119049,119335,119400,119402,119012,119014,119013,119011,119399,119401,119336,119389,119388],"is_not":false,"summary":null,"term":"FYECO:0000162"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is high (eg around 8%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01330":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02668":null,"SJAG_02763":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03449":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04061":null,"SJAG_04574":null},"genotype_count":19,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta frameshift(aa61->stop)","display_uniquename":"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-2","expression":"Not assayed or wild type"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta mpe1-R77W(aa)","display_uniquename":"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02668:allele-1","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_04574","SJAG_03689","SJAG_02668"],"name":"high glucose YES","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_02621","SJAG_04574","SJAG_02392","SJAG_01745","SJAG_03689","SJAG_02763","SJAG_02409","SJAG_03356","SJAG_00426","SJAG_04061","SJAG_03916","SJAG_01330","SJAG_02594"],"single_locus_genotype_uniquenames":["arb1delta","dcr1delta","pom1delta","lem2delta","ago1delta","man1delta","chp1delta","stc1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","clr4delta","rdp1delta","arb2delta","mad2delta"],"synonyms":[{"name":"high glucose rich medium","type":"related"}],"termid":"FYECO:0000162","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0140568
data:
  {"annotated_genes":["SJAG_01435","SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140569"},{"annotations":[74432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140570"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from a cellular membrane.","definition_xrefs":["PMID:24821790","PMID:32973005","PMID:28712723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01435":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"extraction of mislocalized protein from membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140568","terms_by_termid":{"GO:0140569":null,"GO:0140570":null}}


id: MONDO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"astigmatism","termid":"MONDO:0011284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"irregular astigmatism","secondary_identifiers":["SCTID:47099006","ICD9:367.22","DOID:13919","MEDGEN:508922","UMLS:C0152194","icd11.foundation:1086387343"],"termid":"MONDO:0001831","xrefs":{"Monarch":{"xref_id":"0001831"}}}


id: PBO:0042576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2B antisense RNA 1","termid":"PBO:0042576"}


id: GO:0047269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly(ribitol phosphate) + UDP-N-acetyl-D-glucosamine = N-acetyl-D-glucosaminyl-poly(ribitol phosphate) + UDP.","definition_xrefs":["EC:2.4.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"poly(ribitol-phosphate) N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.53-RXN","RHEA:21012"],"synonyms":[{"name":"UDP acetylglucosamine-poly(ribitol phosphate) acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:poly(ribitol-phosphate) N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-poly(ribitol phosphate) acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047269"}


id: MONDO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyloidosis (obsolete MONDO:0004711)","synonyms":[{"name":"obsolete amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0004711","xrefs":{"Monarch":{"xref_id":"0004711"}}}


id: GO:0080185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A symbiont process in which a molecule secreted by the symbiont activates a resistance gene-dependent defense response signaling pathway in the plant host, in order to activate a hypersensitive response to induce necrosis. In the plant, this process involves the direct or indirect recognition of the symbiont effector protein for example through plant resistance receptor or R proteins (or R genes).","definition_xrefs":["PMID:16497589","PMID:23411798","PMID:22241993","PMID:27641772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"effector-mediated activation of host programmed cell death by symbiont","termid":"GO:0034055"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host resistance gene-dependent defense response","termid":"GO:0052158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated activation of plant hypersensitive response by symbiont","secondary_identifiers":["GO:0052423","GO:0052101","GO:0052286","GO:0052527","Wikipedia:Effector-triggered_immunity"],"synonyms":[{"name":"ETI triggered of host innate immune response","type":"related"},{"name":"ETI-triggered of host innate immune response","type":"related"},{"name":"activation by organism of defense response in host by specific elicitors","type":"broad"},{"name":"activation by organism of host gene-for-gene resistance","type":"exact"},{"name":"activation by organism of host resistance gene-dependent defense response","type":"exact"},{"name":"activation by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"activation of HR","type":"narrow"},{"name":"activation of hypersensitive response","type":"narrow"},{"name":"avirulence protein","type":"related"},{"name":"effector-mediated induction of plant hypersensitive response by symbiont","type":"exact"},{"name":"effector-triggered immunity","type":"broad"},{"name":"effector-triggered induction of host innate immune response","type":"related"},{"name":"effector-triggered induction of plant hypersensitive response by symbiont","type":"related"},{"name":"effector-triggered necrosis","type":"related"},{"name":"induction by organism of defense response in host by specific elicitors","type":"broad"},{"name":"induction by organism of host gene-for-gene resistance","type":"exact"},{"name":"induction by organism of pathogen-race/host plant cultivar-specific resistance in host","type":"broad"},{"name":"induction by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"induction of effector-triggered immunity (ETI)","type":"related"},{"name":"necrotrophic effector","type":"related"},{"name":"positive regulation by organism of defense response in host by specific elicitors","type":"broad"},{"name":"positive regulation by organism of host gene-for-gene resistance","type":"exact"},{"name":"positive regulation by symbiont of host resistance gene-dependent defense response","type":"related"},{"name":"positive regulation by symbiont of plant HR","type":"exact"},{"name":"positive regulation by symbiont of plant hypersensitive response","type":"exact"}],"termid":"GO:0080185"}


id: MONDO:1010801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly, non-human animal","termid":"MONDO:1010156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, dog","secondary_identifiers":["OMIA:000146-9615"],"termid":"MONDO:1010801","xrefs":{"Monarch":{"xref_id":"1010801"}}}


id: PBO:0082821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAPDH-dependent diflavin reductase; component of an early step in the cytosolic Fe-S protein assembly (CIA) machinery; transfers electrons from NADPH to the Fe-S cluster of Dre2p; plays a pro-death role under oxidative stress; Tah18p-dependent nitric oxide synthesis confers high-temperature stress tolerance; possible target for development of antifungal drugs","termid":"PBO:0082821"}


id: GO:0061927
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein transport macromolecular complex of the chloroplast membrane that interacts with the precursor proteins and contains components of both the outer membrane and inner membrane complexes containing at least Toc75, Toc159, Toc34 and Tic110.","definition_xrefs":["PMID:28745032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"TOC-TIC supercomplex I","termid":"GO:0061927"}


id: PBO:0087667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner ring of the nuclear pore complex (NPC); contributes to NPC assembly and tethering of DNA to the nuclear periphery; both Nup170p and NUP157p are similar to human Nup155p; NUP157 has a paralog, NUP170, that arose from the whole genome duplication","termid":"PBO:0087667"}


id: PBO:0029055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029055"}


id: PBO:0116630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 3","termid":"PBO:0116630"}


id: PBO:0070044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear","termid":"PBO:0070044"}


id: MONDO:1010326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal degeneration that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal degeneration, non-human animal","secondary_identifiers":["OMIA:000866"],"termid":"MONDO:1010326","xrefs":{"Monarch":{"xref_id":"1010326"}}}


id: PBO:0046463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equatorin","termid":"PBO:0046463"}


id: PBO:0048793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha L","termid":"PBO:0048793"}


id: PBO:0027774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_viridicatumtoxin","termid":"PBO:0027774"}


id: GO:0047759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanal + CoA + NAD(P)+ = butanoyl-CoA + NAD(P)H + H+.","definition_xrefs":["MetaCyc:BUTANAL-DEHYDROGENASE-RXN","EC:1.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"butanal dehydrogenase activity","synonyms":[{"name":"butanal:NAD(P)+ oxidoreductase (CoA-acylating)","type":"related"}],"termid":"GO:0047759"}


id: PBO:0073282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 3","termid":"PBO:0073282"}


id: MONDO:0013348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the CDHR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"cone-rod dystrophy 15","secondary_identifiers":["DOID:0111021","GARD:15686","MEDGEN:462262","OMIM:613660","UMLS:C3150912"],"synonyms":[{"name":"CDHR1 cone-rod dystrophy","type":"exact"},{"name":"CORD15","type":"exact"},{"name":"cone-rod dystrophy 15","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in CDHR1","type":"exact"},{"name":"cone-rod dystrophy type 15","type":"exact"},{"name":"retinitis pigmentosa 65","type":"related"}],"termid":"MONDO:0013348","xrefs":{"Monarch":{"xref_id":"0013348"}}}


id: GO:0021551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the central nervous system is generated and organized. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system morphogenesis","termid":"GO:0021551"}


id: MONDO:0015101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"jaw-winking syndrome","termid":"MONDO:0007946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marin-Amat syndrome","secondary_identifiers":["GARD:19779","MEDGEN:1842834","icd11.foundation:727922687","Orphanet:101104","UMLS:C5681802"],"termid":"MONDO:0015101","xrefs":{"Monarch":{"xref_id":"0015101"}}}


id: PBO:0065838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 3","termid":"PBO:0065838"}


id: GO:0050977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a chemical stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. It is believed that organisms such as birds and salamanders use a 'chemical compass': chemical reactions that involve transitions between different spin states can be influenced by magnetic fields and by detecting the different product ratios, these organisms can perceive the direction of the magnetic field. The mechanism by which this is detected is not certain but it may also involve light stimuli.","definition_xrefs":["Wikipedia:Magnetoception","GOC:ai","PMID:15886990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"},{"relation_name":"is_a","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception by sensory perception of chemical stimulus","synonyms":[{"name":"magnetoreception by chemical stimulus","type":"exact"},{"name":"magnetoreception through chemical stimulus","type":"exact"},{"name":"magnetoreception, sensory perception of chemical stimulus","type":"exact"},{"name":"magnetoreception, using chemical stimulus","type":"exact"}],"termid":"GO:0050977"}


id: PBO:0031093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_present_in_increased_numbers_during_vegetative_growth","termid":"PBO:0031093"}


id: MONDO:0004898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary choroidal atrophy","termid":"MONDO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"total circumpapillary dystrophy of choroid","secondary_identifiers":["DOID:9842","UMLS:C0154896","ICD9:363.52","SCTID:59753003","MEDGEN:509705"],"synonyms":[{"name":"circumpapillary dystrophy of choroid, total","type":"exact"}],"termid":"MONDO:0004898","xrefs":{"Monarch":{"xref_id":"0004898"}}}


id: PBO:0086290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in DNA repair; mutants show reduced efficiency of non-homologous end-joining repair","termid":"PBO:0086290"}


id: FYPO:0008201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell enters the meiotic cell cycle normally: i.e after conjugation with cellular fusion and karyogamy with nuclear fusion.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic cell cycle entry","termid":"FYPO:0008201"}


id: GO:0021506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neuropore closure","termid":"GO:0021506"}


id: GO:0008605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of the enzyme protein kinase CK2.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase CK2 regulator activity (obsolete GO:0008605)","synonyms":[{"name":"casein kinase II, regulator","type":"exact"},{"name":"protein kinase CK2 regulator activity","type":"exact"},{"name":"protein kinase CK2, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008605"}


id: GO:0004618
data:
  {"annotated_genes":["SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69639],"is_not":false,"summary":null,"term":"GO:0004618"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + ATP = 3-phospho-D-glyceroyl phosphate + ADP + H+.","definition_xrefs":["RHEA:14801","EC:2.7.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"phosphoglycerate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70486","Reactome:R-HSA-71850","KEGG_REACTION:R01512","MetaCyc:PHOSGLYPHOS-RXN"],"synonyms":[{"name":"3-PGK","type":"related"},{"name":"3-phosphoglycerate kinase activity","type":"related"},{"name":"3-phosphoglycerate phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric acid kinase activity","type":"related"},{"name":"3-phosphoglyceric acid phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric kinase activity","type":"related"},{"name":"ATP-3-phospho-D-glycerate-1-phosphotransferase activity","type":"related"},{"name":"ATP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"},{"name":"ATP:D-3-phosphoglycerate 1-phosphotransferase activity","type":"related"},{"name":"PGK","type":"related"},{"name":"glycerate 3-phosphate kinase activity","type":"related"},{"name":"glycerophosphate kinase activity","type":"related"},{"name":"phosphoglyceric acid kinase activity","type":"related"},{"name":"phosphoglyceric kinase activity","type":"related"},{"name":"phosphoglycerokinase activity","type":"related"}],"termid":"GO:0004618","terms_by_termid":{"GO:0004618":null}}


id: PBO:0048529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 5","termid":"PBO:0048529"}


id: PBO:0082367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR domain protein that localizes to early and late Golgi vesicles; required for adaptation to varying nutrient concentrations, fluid-phase endocytosis, polarization of the actin cytoskeleton, and vacuole biogenesis","termid":"PBO:0082367"}


id: SO:0000329
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a plus 2 frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"plus_2_framshift","termid":"SO:0000869"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_plus_2_frameshift","synonyms":[{"name":"mRNA with plus 2 frameshift","type":"exact"}],"termid":"SO:0000329"}


id: PBO:0045158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 14","termid":"PBO:0045158"}


id: PBO:0004417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear distribution protein NUDC homolog","termid":"PBO:0004417"}


id: PBO:0013099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP core protein Smg1","termid":"PBO:0013099"}


id: PR:Q09171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate dehydrogenase E1 component subunit beta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11624:SF11","OMA:SCHPO03549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 component subunit beta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.13c","secondary_identifiers":["UniProtKB:Q09171"],"synonyms":[{"name":"PDHE1-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PDHB","type":"exact"}],"termid":"PR:Q09171"}


id: GO:0050098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + methylguanidine = methylammonium + urea.","definition_xrefs":["RHEA:11764","EC:3.5.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"methylguanidinase activity","secondary_identifiers":["MetaCyc:METHYLGUANIDINASE-RXN","KEGG_REACTION:R01589"],"synonyms":[{"name":"methylguanidine amidinohydrolase activity","type":"related"},{"name":"methylguanidine hydrolase activity","type":"related"}],"termid":"GO:0050098"}


id: MONDO:0004457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the maxillary sinus. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus Schneiderian papilloma","termid":"MONDO:0006353"},{"relation_name":"is_a","term_name":"benign neoplasm of maxillary sinus","termid":"MONDO:0021484"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary sinus Schneiderian papilloma","secondary_identifiers":["DOID:8093","MEDGEN:235306","UMLS:C1334646"],"synonyms":[{"name":"Schneiderian papilloma of maxillary sinus","type":"related"},{"name":"Schneiderian papilloma of the maxillary sinus","type":"exact"},{"name":"maxillary sinus Schneiderian papilloma","type":"exact"},{"name":"maxillary sinus paranasal sinus Schneiderian papilloma","type":"exact"},{"name":"paranasal sinus Schneiderian papilloma of maxillary sinus","type":"exact"}],"termid":"MONDO:0004457","xrefs":{"Monarch":{"xref_id":"0004457"}}}


id: GO:0090427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of meiosis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"activation of meiosis","termid":"GO:0090427"}


id: PBO:0079301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin","termid":"PBO:0079301"}


id: PBO:0068893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 135, pseudogene","termid":"PBO:0068893"}


id: MONDO:0018808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"Caroli syndrome","secondary_identifiers":["NANDO:2200934","DOID:0081394","GARD:21976","Orphanet:480520","MEDGEN:1814547","UMLS:C5700203"],"termid":"MONDO:0018808","xrefs":{"Monarch":{"xref_id":"0018808"}}}


id: GO:2001248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ammonia assimilation cycle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"regulates","term_name":"ammonia assimilation cycle","termid":"GO:0019676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of ammonia assimilation cycle","synonyms":[{"name":"regulation of glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"regulation of glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:2001248"}


id: MONDO:0013684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 6","secondary_identifiers":["MEDGEN:482071","GARD:18423","UMLS:C3280441","OMIM:614319"],"synonyms":[{"name":"VUR6","type":"exact"},{"name":"vesicoureteral reflux 6","type":"exact"}],"termid":"MONDO:0013684","xrefs":{"Monarch":{"xref_id":"0013684"}}}


id: PBO:0063461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor C","termid":"PBO:0063461"}


id: MONDO:0010739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taqi polymorphism","secondary_identifiers":["MEDGEN:374172","OMIM:313480","UMLS:C1839238"],"synonyms":[{"name":"TAQ1","type":"related"},{"name":"TaqI polymorphism","type":"related"},{"name":"Taqi polymorphism","type":"exact"}],"termid":"MONDO:0010739","xrefs":{"Monarch":{"xref_id":"0010739"}}}


id: PR:W6JQK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC651.07 gene.","definition_xrefs":["UniProtKB:W6JQK2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPBC651.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.07","synonyms":[{"name":"Spom972h-SPBC651.07","type":"exact"}],"termid":"PR:W6JQK2"}


id: PBO:0051009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily DCC subclass member 4","termid":"PBO:0051009"}


id: PBO:0073742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A1 divergent transcript","termid":"PBO:0073742"}


id: PR:O59806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC550.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C550.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.08","synonyms":[{"name":"Spom972h-SPCC550.08","type":"exact"}],"termid":"PR:O59806"}


id: PBO:0059152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 4","termid":"PBO:0059152"}


id: GO:0039530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of dsRNA from another organism to the cytoplasmic pattern recognition receptor (PRR) MDA-5 (also known as IFIH1). MDA-5 detects RNA synthesized during viral replication or shed by non-viral pathogens, and triggers a signaling pathway to protect the host against infection, for example by inducing the expression of cytokines.","definition_xrefs":["GOC:bf","PMID:33087405","PMID:19620789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MDA-5 signaling pathway","synonyms":[{"name":"IFIH1 signaling pathway","type":"exact"},{"name":"MDA-5 signalling pathway","type":"exact"},{"name":"MDA5 signaling pathway","type":"narrow"},{"name":"melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:0039530"}


id: PBO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda receptor 1","termid":"PBO:0050964"}


id: PBO:0078225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-3","termid":"PBO:0078225"}


id: PBO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H4","termid":"PBO:0050568"}


id: PBO:0083666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum membrane protein that binds and inhibits Ras2p; binds to and inhibits GTP-bound Ras2p at the endoplasmic reticulum (ER); component of the GPI-GnT complex which catalyzes the first step in GPI-anchor biosynthesis; probable homolog of mammalian PIG-Y protein","termid":"PBO:0083666"}


id: PBO:0079168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein","termid":"PBO:0079168"}


id: PBO:0035812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_tRNA_genes_during_vegetative_growth","termid":"PBO:0035812"}


id: MOD:00243
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-cysteine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:8183941","RESID:AA0238","PubMed:8895467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine oxazole-4-carboxylic acid","synonyms":[{"name":"2-(1-azanyl-2-sulfanylethyl)-4-oxazolecarboxylic acid","type":"exact"},{"name":"2-[(1R)-1-amino-2-sulfanylethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Cys-Ser)","type":"exact"},{"name":"L-cysteine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00243"}


id: MONDO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An alveolar soft part sarcoma arising from the cervix.","definition_xrefs":["NCIT:C40225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alveolar soft part sarcoma","termid":"MONDO:0011655"},{"relation_name":"is_a","term_name":"sarcoma of cervix uteri","termid":"MONDO:0016280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical alveolar soft part sarcoma","secondary_identifiers":["UMLS:C1516408","DOID:4442","MEDGEN:273905"],"termid":"MONDO:0003003","xrefs":{"Monarch":{"xref_id":"0003003"}}}


id: MONDO:0100293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diaphragm disorder","termid":"MONDO:0005728"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic malformation","termid":"MONDO:0100293","xrefs":{"Monarch":{"xref_id":"0100293"}}}


id: MONDO:0015974
data:
  {"annotated_genes":["SJAG_02527","SJAG_00677","SJAG_02038","SJAG_05024","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[86822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011686"},{"annotations":[85403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"},{"annotations":[85655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014168"},{"annotations":[86206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014391"}]},"cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) comprises a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T lymphocytes resulting in early-onset severe respiratory infections and failure to thrive. They are classified according to immunological phenotype into SCID with absence of T cells but presence of B cells (T-B+ SCID) or SCID with absence of both (T-B- SCID). Both of these groups include several forms, with or without natural killer (NK) cells.","definition_xrefs":["Orphanet:183660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00677":null,"SJAG_02038":null,"SJAG_02527":null,"SJAG_04199":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1706","icd11.foundation:963193284","NCIT:C3472","HP:0004430","GARD:7628","DOID:627","MEDGEN:88328","MESH:D016511","MedDRA:10069566","SCTID:31323000","UMLS:C0085110"],"synonyms":[{"name":"SCID","type":"exact"},{"name":"combined T and B cell inborn immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency (disease)","type":"exact"},{"name":"severe combined immunodeficiency disease","type":"exact"}],"termid":"MONDO:0015974","terms_by_termid":{"MONDO:0009973":null,"MONDO:0011686":null,"MONDO:0012650":null,"MONDO:0014168":null,"MONDO:0014391":null},"xrefs":{"Monarch":{"xref_id":"0015974"}}}


id: MONDO:0003455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive, papillary epithelial neoplasm that arises from the epithelium of the intrahepatic or extrahepatic bile ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"intraductal papilloma","termid":"MONDO:0002060"},{"relation_name":"is_a","term_name":"bile duct neoplasm","termid":"MONDO:0021662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct papillary neoplasm","secondary_identifiers":["NCIT:C6881","DOID:5468","UMLS:C1879344","ICDO:8503/0","MEDGEN:360303"],"synonyms":[{"name":"IPN","type":"exact"},{"name":"bile duct papillary epithelial neoplasm","type":"exact"},{"name":"bile duct papillary neoplasm","type":"exact"},{"name":"bile duct papillomatosis","type":"exact"},{"name":"biliary papillomatosis","type":"exact"},{"name":"intraductal papillary neoplasm","type":"exact"}],"termid":"MONDO:0003455","xrefs":{"Monarch":{"xref_id":"0003455"}}}


id: MONDO:0007683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Grant syndrome is a rare osteogenesis imperfecta-like disorder, described in two patients to date, characterized clinically by persistent wormian bones, blue sclera, mandibular hypoplasia, shallow glenoid fossa, and campomelia. There have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:2097"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Grant syndrome","secondary_identifiers":["MESH:C537293","icd11.foundation:1320218486","OMIM:138930","SCTID:723827003","UMLS:C1841835","MEDGEN:333925","GARD:2559"],"synonyms":[{"name":"Grant syndrome","type":"exact"},{"name":"persistent wormian bones, blue sclerae, mandibular hypoplasia, shallow glenoid fossae and campomelia","type":"related"}],"termid":"MONDO:0007683","xrefs":{"Monarch":{"xref_id":"0007683"}}}


id: MONDO:0044624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pediatric collagenous gastritis","secondary_identifiers":["Orphanet:487809","MEDGEN:1805938","UMLS:C5680109","GARD:21998"],"synonyms":[{"name":"childhood-onset collagenous gastritis","type":"exact"}],"termid":"MONDO:0044624","xrefs":{"Monarch":{"xref_id":"0044624"}}}


id: GO:0033398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of zeatin, 2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin biosynthetic process","termid":"GO:0009691"},{"relation_name":"is_a","term_name":"zeatin metabolic process","termid":"GO:0033397"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zeatin biosynthetic process","synonyms":[{"name":"zeatin anabolism","type":"exact"},{"name":"zeatin biosynthesis","type":"exact"},{"name":"zeatin formation","type":"exact"},{"name":"zeatin synthesis","type":"exact"}],"termid":"GO:0033398"}


id: PBO:0084464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase of the HOG signaling pathway; activated under severe osmotic stress; mitophagy-specific regulator; plays a role in regulating Ty1 transposition","termid":"PBO:0084464"}


id: PBO:0060944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor I A","termid":"PBO:0060944"}


id: PBO:0043628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit alpha","termid":"PBO:0043628"}


id: GO:0072280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity involved in nephron morphogenesis","termid":"GO:0072046"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity involved in metanephric nephron morphogenesis","synonyms":[{"name":"establishment of planar cell polarity involved in metanephric nephron morphogenesis","type":"narrow"}],"termid":"GO:0072280"}


id: PBO:0045986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 autophagy associated transmembrane protein","termid":"PBO:0045986"}


id: PBO:0076736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like 2, pseudogene","termid":"PBO:0076736"}


id: GO:0070310
data:
  {"annotated_genes":["SJAG_00429","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100642,106406],"is_not":false,"summary":null,"term":"GO:0070310"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the protein kinase ATR and ATR-interacting protein (ATRIP) and binds single-stranded DNA; ssDNA binding affinity is increased in the presence of replication protein A.","definition_xrefs":["PMID:14724280","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"ATR-ATRIP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mec1-Lcd1 complex","type":"narrow"},{"name":"Rad3-Rad26 complex","type":"narrow"}],"termid":"GO:0070310","terms_by_termid":{"GO:0070310":null}}


id: PBO:0088045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p; functions as a general positive regulator of Cdc34p activity; nuclear protein that may represent a link between nucleocytoplasmic transport and ubiquitin ligase activity","termid":"PBO:0088045"}


id: PATO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000561 length value (obsolete PATO:0000561)","termid":"PATO:0000561"}


id: PBO:0055820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LPP antisense RNA 2","termid":"PBO:0055820"}


id: FYPO:0003817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000661","FYPO:0000641"],"is_obsolete":false,"name":"abnormal 5'-3' DNA helicase activity","termid":"FYPO:0003817"}


id: GO:0102218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + n H2O + starch = n AMP + n hydrogenphosphate + a 6-phosphogluco-amylopectin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete starch, H2O dikinase activity (obsolete GO:0102218)","termid":"GO:0102218"}


id: PBO:0039301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG14 UDP-N-acetylglucosaminyltransferase subunit","termid":"PBO:0039301"}


id: PBO:0079973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 11","termid":"PBO:0079973"}


id: PBO:0070083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 40, pseudogene","termid":"PBO:0070083"}


id: MONDO:0019035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pancreatoblastoma is a rare malignant epithelial pancreatic neoplasm, most often found in children, which usually presents with the non-specific symptoms of a palpable mass, vomiting abdominal pain, jaundice, and weight loss/failure to thrive, and is characterized histologically by multiple lines of differentiation (acinar, ductal, mesenchymal, neuroendocrine) and the presence of squamoid nests.","definition_xrefs":["Orphanet:677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant exocrine pancreas neoplasm","termid":"MONDO:0002116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatoblastoma","secondary_identifiers":["MESH:C537162","icd11.foundation:733863058","NCIT:C4265","MEDGEN:87250","ONCOTREE:PB","UMLS:C0334489","NANDO:2200082","DOID:6823","icd11.foundation:1310236105","GARD:4210"],"synonyms":[{"name":"PB","type":"related"},{"name":"pancreatoblastoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0019035","xrefs":{"Monarch":{"xref_id":"0019035"}}}


id: SO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region that promotes or induces the process of recombination.","definition_xrefs":["PMID:8861911","SGD:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_regulatory_region","termid":"SO:0001681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_enhancer","synonyms":[{"name":"recombination enhancer","type":"exact"}],"termid":"SO:0002059"}


id: MONDO:0021838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by cherubism (disorder characterized by abnormal bone tissue in the lower part of the face. Beginning in early childhood, both the lower jaw (the mandible) and the upper jaw (the maxilla) become enlarged as bone is replaced with painless, cyst-like growths.), visual impairment due to optic atrophy and short stature. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:8281276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"cherubism","termid":"MONDO:0007315"},{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy","termid":"MONDO:0020250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328","MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"Al Gazali Khidr Prem Chandran syndrome","secondary_identifiers":["MESH:C535616","UMLS:C2930951","GARD:586","MEDGEN:419678"],"synonyms":[{"name":"cherubism, optic atrophy and short stature","type":"related"}],"termid":"MONDO:0021838","xrefs":{"Monarch":{"xref_id":"0021838"}}}


id: GO:0002632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of granuloma formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granuloma formation","termid":"GO:0002631"},{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"negatively_regulates","term_name":"granuloma formation","termid":"GO:0002432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granuloma formation","synonyms":[{"name":"down regulation of granuloma formation","type":"exact"},{"name":"down-regulation of granuloma formation","type":"exact"},{"name":"downregulation of granuloma formation","type":"exact"},{"name":"inhibition of granuloma formation","type":"narrow"}],"termid":"GO:0002632"}


id: GO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction. For example, some viruses are able to activate host autophagy as a cellular survival mechanism, hence delaying or inhibiting apoptosis.","definition_xrefs":["VZ:846","GOC:sp","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host autophagy","termid":"GO:0075071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host autophagy","secondary_identifiers":["GO:0075044"],"synonyms":[{"name":"activation of host autophagy by virus","type":"exact"},{"name":"autophagy of host cells involved in interaction with symbiont","type":"related"},{"name":"induction by virus of host autophagy","type":"narrow"},{"name":"positive regulation by virus of host autophagy","type":"broad"}],"termid":"GO:0039520"}


id: PR:Q9UT35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ectonucleoside triphosphate diphosphohydrolase 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00693","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine-diphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.08","secondary_identifiers":["UniProtKB:Q9UT35"],"synonyms":[{"name":"GDPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ENTPD6","type":"exact"}],"termid":"PR:Q9UT35"}


id: GO:1905065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:rph","GOC:TermGenie","GOC:BHF_miRNA","PMID:19088079","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905063"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell differentiation","synonyms":[{"name":"activation of VSMC differentiation","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell differentiation","type":"narrow"},{"name":"activation of vascular smooth muscle cell differentiation","type":"narrow"},{"name":"positive regulation of VSMC differentiation","type":"exact"},{"name":"positive regulation of vascular smooth muscle cell differentiation","type":"exact"},{"name":"up regulation of VSMC differentiation","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell differentiation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of VSMC differentiation","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of VSMC differentiation","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1905065"}


id: PR:Q9USQ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-tubulin complex component 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.20c","secondary_identifiers":["UniProtKB:Q9USQ2"],"synonyms":[{"name":"Spom972h-TUBGCP3","type":"exact"},{"name":"altered polarity protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ2"}


id: GO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of acetylcholine from one side of a membrane to the other. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transmembrane transporter activity","termid":"GO:0005326"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"acetate ester transmembrane transporter activity","termid":"GO:1901375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"acetylcholine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-264615"],"termid":"GO:0005277"}


id: PBO:0042380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD244 molecule","termid":"PBO:0042380"}


id: PBO:0047561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 14","termid":"PBO:0047561"}


id: PBO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family Glia Maturation Factor homolog Gmf1","termid":"PBO:0001291"}


id: GO:0015385
data:
  {"annotated_genes":["SJAG_04616","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77855,79849],"is_not":false,"summary":null,"term":"GO:0015385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out).","definition_xrefs":["TC:2.A.36.-.-","TC:2.A.35.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium:proton antiporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2872444","Reactome:R-HSA-426015","RHEA:29251","GO:0015502","Reactome:R-HSA-2872463","Reactome:R-HSA-2889070","Reactome:R-HSA-5661039","Reactome:R-HSA-425983","Reactome:R-HSA-425994","Reactome:R-HSA-425965","Reactome:R-HSA-5661086","MetaCyc:TRANS-RXN-129"],"synonyms":[{"name":"pH-dependent sodium:hydrogen antiporter activity","type":"narrow"},{"name":"pH-dependent sodium:proton antiporter activity","type":"narrow"},{"name":"sodium/hydrogen antiporter activity","type":"exact"},{"name":"sodium:hydrogen antiporter activity","type":"exact"},{"name":"sodium:hydrogen exchange activity","type":"exact"},{"name":"sodium:hydrogen exchanger","type":"exact"}],"termid":"GO:0015385","terms_by_termid":{"GO:0015385":null}}


id: PBO:0071815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 10","termid":"PBO:0071815"}


id: GO:0097215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["GOC:yaf","PMID:20544854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysosomal membrane permeability","termid":"GO:0097213"},{"relation_name":"is_a","term_name":"negative regulation of membrane permeability","termid":"GO:1905709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lysosomal membrane permeability","synonyms":[{"name":"negative regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097215"}


id: PBO:0060971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYB pseudogene 1","termid":"PBO:0060971"}


id: GO:0089705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a specific location the cell outer membrane.","definition_xrefs":["GOC:dos","PMID:12823819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to outer membrane","termid":"GO:0089705"}


id: MONDO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 77","secondary_identifiers":["MEDGEN:1788976","OMIM:619223","UMLS:C5543173"],"synonyms":[{"name":"IMD77","type":"exact"},{"name":"immunodeficiency 77","type":"exact"}],"termid":"MONDO:0030973","xrefs":{"Monarch":{"xref_id":"0030973"}}}


id: PBO:0051621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 3","termid":"PBO:0051621"}


id: PBO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster ME31B","termid":"PBO:0015694"}


id: PBO:0060302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12A and MYL12B antisense RNA 1","termid":"PBO:0060302"}


id: PBO:0077966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 18-2","termid":"PBO:0077966"}


id: GO:1904883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomerase catalytic core complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:rph","GOC:TermGenie","PMID:26586433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of telomerase catalytic core complex assembly","termid":"GO:1904882"},{"relation_name":"negatively_regulates","term_name":"telomerase catalytic core complex assembly","termid":"GO:1904868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of telomerase catalytic core complex assembly","synonyms":[{"name":"down regulation of TERT-TERC complex assembly","type":"related"},{"name":"down regulation of TERT-TERC complex formation","type":"related"},{"name":"down regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"down regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"down-regulation of TERT-TERC complex assembly","type":"related"},{"name":"down-regulation of TERT-TERC complex formation","type":"related"},{"name":"down-regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"down-regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"downregulation of TERT-TERC complex assembly","type":"related"},{"name":"downregulation of TERT-TERC complex formation","type":"related"},{"name":"downregulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"downregulation of telomerase catalytic core complex formation","type":"exact"},{"name":"inhibition of TERT-TERC complex assembly","type":"related"},{"name":"inhibition of TERT-TERC complex formation","type":"related"},{"name":"inhibition of telomerase catalytic core complex assembly","type":"narrow"},{"name":"inhibition of telomerase catalytic core complex formation","type":"narrow"},{"name":"negative regulation of TERT-TERC complex assembly","type":"related"},{"name":"negative regulation of TERT-TERC complex formation","type":"related"},{"name":"negative regulation of telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904883"}


id: MONDO:0022316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndrome with the association of stubby, coarse, sparse and fragile hair, eyebrows and eyelashes with photosensitivity and nonprogressive intellectual deficit, without a demonstrable metabolic aberration. It has been described in three sisters born to consanguineous parents.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hair shaft abnormality (obsolete MONDO:0019282)","termid":"MONDO:0019282"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hair defect with photosensitivity and intellectual disability syndrome","secondary_identifiers":["MEDGEN:383868","OMIM:234030","Orphanet:1408","SCTID:721007005","MESH:C537628","UMLS:C1856241"],"synonyms":[{"name":"Calderon Gonzalez-Cantu syndrome","type":"exact"},{"name":"Calderón-González-Cantu syndrome","type":"exact"},{"name":"hair defect with photosensitivity and intellectual disability","type":"related"},{"name":"hair defect with photosensitivity and intellectual disability syndrome","type":"exact"},{"name":"hair defect with photosensitivity and mental retardation","type":"related"},{"name":"hair defect-photosensitivity-intellectual disability syndrome","type":"exact"},{"name":"kinky hair, photosensitivity, broken eyebrows and eyelashes, and nonprogressive intellectual disability","type":"related"},{"name":"kinky hair, photosensitivity, broken eyebrows and eyelashes, and nonprogressive mental retardation","type":"related"}],"termid":"MONDO:0022316","xrefs":{"Monarch":{"xref_id":"0022316"}}}


id: PBO:0011972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Rad22 (previously Rad52)","termid":"PBO:0011972"}


id: MONDO:0005263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unipolar depression (obsolete MONDO:0005263)","termid":"MONDO:0005263","xrefs":{"Monarch":{"xref_id":"0005263"}}}


id: GO:0010912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the activity of an isomerase. An isomerase catalyzes the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of isomerase activity (obsolete GO:0010912)","termid":"GO:0010912"}


id: GO:0032814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell activation","synonyms":[{"name":"regulation of NK cell activation","type":"exact"}],"termid":"GO:0032814"}


id: GO:0031073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ NADPH + O2 = 26-hydroxycholesterol + H2O + NADP+.","definition_xrefs":["PMID:950499","RHEA:43836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholesterol 26-hydroxylase activity","termid":"GO:0031073"}


id: MONDO:0004468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paget disease involving the squamous epithelium of the anal canal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal Paget disease","termid":"MONDO:0002651"},{"relation_name":"is_a","term_name":"anal canal adenocarcinoma","termid":"MONDO:0002735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal canal Paget disease","secondary_identifiers":["UMLS:C1332261","NCIT:C7477","DOID:8119","MEDGEN:231062","SCTID:236811000119101"],"synonyms":[{"name":"Paget disease of the anal canal","type":"exact"},{"name":"Paget's disease of anal canal","type":"exact"},{"name":"Paget's disease of the anal canal","type":"exact"},{"name":"anal canal Paget disease","type":"exact"},{"name":"anal canal Paget's disease","type":"exact"},{"name":"anal canal mammary Paget's disease","type":"exact"}],"termid":"MONDO:0004468","xrefs":{"Monarch":{"xref_id":"0004468"}}}


id: MONDO:1011052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, crab-eating macaque","secondary_identifiers":["OMIA:000807-9541"],"termid":"MONDO:1011052","xrefs":{"Monarch":{"xref_id":"1011052"}}}


id: MONDO:0002078
data:
  {"annotated_genes":["SJAG_02730","SJAG_03703","SJAG_02431","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85721,85722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013567"},{"annotations":[85093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013011"},{"annotations":[86410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"},{"annotations":[86409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013769"}]},"cv_name":"mondo","definition":"A congenital disorder characterized by the presence of an abnormal communication between the atria or the ventricles of the heart due to defects in the cardiac septum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_02730":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart septal defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D006343","SCTID:253273004","ICD9:745.9","NCIT:C84482","MEDGEN:6752","ICD9:745.8","UMLS:C0018816","DOID:1681"],"synonyms":[{"name":"Cardiac septal defects","type":"exact"},{"name":"congenital septal defect","type":"exact"},{"name":"congenital septal defect of heart","type":"exact"},{"name":"holes in the heart","type":"exact"},{"name":"septal defect","type":"exact"}],"termid":"MONDO:0002078","terms_by_termid":{"MONDO:0013011":null,"MONDO:0013567":null,"MONDO:0013769":null,"MONDO:0013770":null},"xrefs":{"Monarch":{"xref_id":"0002078"}}}


id: PATO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that pertains to the post-translational modification of a protein by the covalent attachment of one or more ubiquitin monomer.","definition_xrefs":["neurolex:http://neurolex.org/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinated","synonyms":[{"name":"Ubiquitylation","type":"related"}],"termid":"PATO:0002216"}


id: GO:0008118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP-N-acetyl-beta-neuraminate = an N-acetyl-alpha-neuraminyl-(2->3)-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP + H+.","definition_xrefs":["RHEA:52316","PMID:10206952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase activity","secondary_identifiers":["EC:2.4.3.6","MetaCyc:2.4.99.6-RXN"],"synonyms":[{"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase","type":"exact"},{"name":"alpha2->3 sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-beta-galactosyl(1->4)acetylglucosaminide alpha2->3-sialyltransferase activity","type":"related"},{"name":"neolactotetraosylceramide alpha-2,3-sialyltransferase activity","type":"narrow"}],"termid":"GO:0008118"}


id: GO:0047449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-L-arabinonate = 2,5-dioxopentanoate + H2O.","definition_xrefs":["EC:4.2.1.43","RHEA:17201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-L-arabinonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02278","MetaCyc:4.2.1.43-RXN"],"synonyms":[{"name":"2-dehydro-3-deoxy-L-arabinonate hydro-lyase (2,5-dioxopentanoate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-L-arabinonate hydro-lyase activity","type":"related"},{"name":"2-keto-3-deoxy-L-arabinonate dehydratase activity","type":"related"}],"termid":"GO:0047449"}


id: PBO:0055067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2483","termid":"PBO:0055067"}


id: FYPO:0004578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of histone H3 in cell","synonyms":[{"name":"decreased accumulation of histone H3 in cell","type":"related"},{"name":"decreased cellular histone H3 level","type":"exact"},{"name":"decreased histone H3 level during vegetative growth","type":"exact"},{"name":"decreased level of histone H3 in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H3 in cell during vegetative growth","type":"exact"},{"name":"reduced level of histone H3 in cell","type":"exact"}],"termid":"FYPO:0004578"}


id: PBO:0043420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD nuclear envelope phosphatase 1 regulatory subunit 1","termid":"PBO:0043420"}


id: PBO:0029629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_meiotic_chromosomes","termid":"PBO:0029629"}


id: PBO:0042407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC20 divergent transcript","termid":"PBO:0042407"}


id: FYPO:0006510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is abnormal at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal telomere structure","synonyms":[{"name":"abnormal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"abnormal telomere structure during mitotic cell cycle","type":"related"},{"name":"abnormal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0006510"}


id: PBO:0052644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 12","termid":"PBO:0052644"}


id: GO:0075530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as linear structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a linear episome","synonyms":[{"name":"establishment of latency as a linear plasmid","type":"exact"},{"name":"establishment of linear plasmid latency","type":"exact"}],"termid":"GO:0075530"}


id: FYPO:0001861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost due to abnormal mitotic sister chromatid segregation at a higher frequency than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss during vegetative growth","termid":"FYPO:0001840"},{"relation_name":"output_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000337","FYPO:0005447","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"increased minichromosome loss upon segregation during vegetative growth","synonyms":[{"name":"increased plasmid loss upon segregation during mitotic cell cycle","type":"exact"},{"name":"mitotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001861"}


id: PR:Q10296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.02","synonyms":[{"name":"Spom972h-SPAC22H10.02","type":"exact"}],"termid":"PR:Q10296"}


id: PBO:0089378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase e1 component alpha subunit Pda1","termid":"PBO:0089378"}


id: PBO:0088622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase","termid":"PBO:0088622"}


id: MONDO:0033717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hereditary ataxia characterized by delayed motor milestones in early infancy, hypotonia, ataxic gait, intention tremor, nystagmus, dysarthric speech, and variable learning difficulties. Neuroimaging shows a mixed picture of cerebellar hypoplasia and degeneration, with an almost absent inferior lobule and thinning of the folia of the vermis. In addition, cisterna magna and fourth ventricle are enlarged with relative sparing of the brain stem volume.","definition_xrefs":["Orphanet:512260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital cerebellar ataxia","termid":"MONDO:0020043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"congenital cerebellar ataxia due to RNU12 mutation","secondary_identifiers":["MEDGEN:1799317","GARD:22075","UMLS:C5567894"],"termid":"MONDO:0033717","xrefs":{"Monarch":{"xref_id":"0033717"}}}


id: PBO:0072811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 7","termid":"PBO:0072811"}


id: PBO:0087271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase and subunit of TFIIK, a TFIIH subassembly; phosphorylates the C-terminal domain (CTD) of RNAPII (Ser5 and Ser7); facilitates recruitment of mRNA 5'-capping and polyadenylation factors to the RNAPII holoenzyme complex; minor role in RNAPII transcription; role in RNAPI transcription; regulates Atg1p kinase complex assembly during nitrogen starvation induced autophagy; associates with cyclin Ccl1p; relocalizes to the cytosol in response to hypoxia; ortholog of human CDK7","termid":"PBO:0087271"}


id: MONDO:0008765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the RPE65 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"RPE65-related recessive retinopathy","termid":"MONDO:0100368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"Leber congenital amaurosis 2","secondary_identifiers":["MEDGEN:348473","MESH:C536601","OMIM:204100","UMLS:C1859844","GARD:636","DOID:0110016","ICD10CM:H35.5"],"synonyms":[{"name":"LCA2","type":"exact"},{"name":"Leber congenital amaurosis 2","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in RPE65","type":"exact"},{"name":"Leber congenital amaurosis type 2","type":"exact"},{"name":"RPE65 Leber congenital amaurosis","type":"exact"},{"name":"amaurosis congenita of Leber 2","type":"related"},{"name":"amaurosis congenita of Leber II","type":"exact"},{"name":"amaurosis congenita of Leber, type 2","type":"related"}],"termid":"MONDO:0008765","xrefs":{"Monarch":{"xref_id":"0008765"}}}


id: MOD:00602
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with an methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated residue","synonyms":[{"name":"NMeRes","type":"exact"}],"termid":"MOD:00602"}


id: PBO:0004717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit F (predicted)","termid":"PBO:0004717"}


id: FYPO:0006559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle disassembly begins later than normal.","definition_xrefs":["GO:0051228","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle disassembly","termid":"FYPO:0004621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000337"],"is_obsolete":false,"name":"delayed onset of mitotic spindle disassembly","synonyms":[{"name":"delayed mitotic spindle disassembly","type":"exact"},{"name":"delayed onset of mitotic spindle disassembly during vegetative growth","type":"exact"},{"name":"delayed onset of spindle disassembly during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006559"}


id: MONDO:0002616
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that arises from the mesenchyma-derived cells of the soft tissue or bone. Representative examples include lipoma, leiomyoma, leiomyosarcoma and osteosarcoma.","definition_xrefs":["NCIT:C7059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"mesenchymal cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3350","MEDGEN:277359","UMLS:C1334699"],"synonyms":[{"name":"benign miscellaneous mesenchymal tumor","type":"exact"},{"name":"benign miscellaneous mesenchymal tumour","type":"exact"},{"name":"mesenchymal cell neoplasm","type":"exact"},{"name":"mesenchymal cell tumor","type":"exact"},{"name":"mesenchymal cell tumour","type":"exact"},{"name":"mesenchymal neoplasm","type":"exact"},{"name":"mesenchymal tumor","type":"exact"},{"name":"mesenchymal tumour","type":"exact"}],"termid":"MONDO:0002616","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0002616"}}}


id: PBO:0090034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, ribosome associated Sks2","termid":"PBO:0090034"}


id: MONDO:0008494
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86148],"is_not":false,"summary":null,"term":"MONDO:0008494"}]},"cv_name":"mondo","definition":"A rare, hereditary, hemolytic anemia due to a red cell membrane anomaly characterized by fatigue, mild anemia and pseudohyperkalemia due to a potassium leak from the red blood cells. A hallmark of this condition is that red blood cells lyse on storage at 4 degrees centigrade.","definition_xrefs":["Orphanet:398088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary stomatocytosis","termid":"MONDO:0020102"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"cryohydrocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535827","OMIM:185020","GARD:10184","MEDGEN:396137","UMLS:C1861453"],"synonyms":[{"name":"CHC","type":"exact"},{"name":"cryohydrocytosis","type":"exact"},{"name":"hereditary cryohydrocytosis with normal stomatin","type":"exact"},{"name":"pseudohyperkalemia Cardiff","type":"related"},{"name":"stomatocytosis, cold-sensitive","type":"exact"}],"termid":"MONDO:0008494","terms_by_termid":{"MONDO:0008494":null},"xrefs":{"Monarch":{"xref_id":"0008494"}}}


id: MONDO:0957396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 51","secondary_identifiers":["MEDGEN:1841244","OMIM:620438","UMLS:C5830608"],"termid":"MONDO:0957396","xrefs":{"Monarch":{"xref_id":"0957396"}}}


id: GO:0031627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which linear telomeric DNA is remodeled into duplex loops, by the invasion of a 3' single-stranded overhang into the duplex region.","definition_xrefs":["GOC:vw","PMID:10338214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"telomeric loop formation","synonyms":[{"name":"T loop biosynthesis","type":"exact"},{"name":"T loop formation","type":"exact"},{"name":"t-loop biosynthesis","type":"exact"},{"name":"t-loop formation","type":"exact"}],"termid":"GO:0031627"}


id: MONDO:0016703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An oligoastrocytoma characterized by the presence of increased cellularity, nuclear atypia, pleomorphism, and high mitotic activity.","definition_xrefs":["NCIT:C6959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"},{"relation_name":"is_a","term_name":"oligoastrocytoma","termid":"MONDO:0016702"},{"relation_name":"is_a","term_name":"anaplastic cancer","termid":"MONDO:0020633"},{"relation_name":"is_a","term_name":"grade III glioma","termid":"MONDO:0021640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"anaplastic oligoastrocytoma","secondary_identifiers":["MEDGEN:96556","ONCOTREE:AOAST","Orphanet:251663","GARD:10637","UMLS:C0431108","EFO:0002500"],"synonyms":[{"name":"AOAST","type":"related"},{"name":"WHO grade III mixed glioma","type":"exact"},{"name":"aMOA","type":"exact"},{"name":"anaplastic mixed glioma","type":"exact"},{"name":"anaplastic oligoastrocytoma","type":"exact"}],"termid":"MONDO:0016703","xrefs":{"Monarch":{"xref_id":"0016703"}}}


id: PBO:0049013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6A","termid":"PBO:0049013"}


id: PBO:0005636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine synthase Pps1","termid":"PBO:0005636"}


id: PBO:0040276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atos homolog B","termid":"PBO:0040276"}


id: PBO:0071444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 50","termid":"PBO:0071444"}


id: GO:0000153
data:
  {"annotated_genes":["SJAG_04384","SJAG_03841","SJAG_01051","SJAG_01134","SJAG_05274","SJAG_01709","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109366,103755,89001,116963,104608,105095,107472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found in the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000153","terms_by_termid":{"GO:0000836":null}}


id: SO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Bel-Pao superfamily are similar to LTRs in the Gypsy and Retrovirus superfamilies. Mainly described in metazoan genomes, this superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH and INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bel_Pao_LTR_retrotransposon","synonyms":[{"name":"Bel Pao LTR retrotransposon","type":"exact"},{"name":"Bel-Pao LTR retrotransposon","type":"exact"},{"name":"RLB retrotransposon","type":"exact"}],"termid":"SO:0002266"}


id: PBO:0056883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 3","termid":"PBO:0056883"}


id: MONDO:0971150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 11, with spasticity","secondary_identifiers":["MEDGEN:1856205","OMIM:620854","UMLS:C5935630"],"termid":"MONDO:0971150","xrefs":{"Monarch":{"xref_id":"0971150"}}}


id: FYPO:0007437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic spindle assembly checkpoint is activated continuously. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:28017606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"constitutive activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"constitutive activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"constitutively activated of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0007437"}


id: PR:Q09177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I and III subunit RPAC2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13946:SF17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I and III subunit RPAC2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.01","secondary_identifiers":["UniProtKB:Q09177"],"synonyms":[{"name":"AC19 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerases I and III 14 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I and III subunit AC2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1687.01","type":"related"},{"name":"Spom972h-POLR1D","type":"exact"},{"name":"rpa17","type":"related"}],"termid":"PR:Q09177"}


id: PBO:0113302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in C/D snoRNP assembly; critical for formation of small nucleolar ribonucleoprotein complexes that are required for rRNA processing and 2'-O-methylation; regulates abundance of Rsa1p; required for growth at high temperature; mutations in human homolog ZNHIT3 cause PEHO syndrome, a ribosomopathy characterized by extreme cerebellar atrophy","termid":"PBO:0113302"}


id: PBO:0038677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 3","termid":"PBO:0038677"}


id: PBO:0052685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 9","termid":"PBO:0052685"}


id: PBO:0087929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase); P4-type ATPase; maintains membrane lipid asymmetry in post-Golgi secretory vesicles; contributes to clathrin-coated vesicle formation, endocytosis, protein trafficking between the Golgi and endosomal system and the cellular response to mating pheromone; autoinhibited by its C-terminal tail; localizes to the trans-Golgi network","termid":"PBO:0087929"}


id: PBO:0057961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3682","termid":"PBO:0057961"}


id: PBO:0064003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 37","termid":"PBO:0064003"}


id: PBO:0081014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 2","termid":"PBO:0081014"}


id: MONDO:0859193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neuroocular syndrome","secondary_identifiers":["UMLS:C5551362","OMIMPS:619539","MEDGEN:1790414"],"termid":"MONDO:0859193","xrefs":{"Monarch":{"xref_id":"0859193"}}}


id: MONDO:0005366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of hepatitis B infection.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis B virus infection","termid":"MONDO:0005344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"chronic hepatitis B virus infection","secondary_identifiers":["EFO:0004239","MEDGEN:99834","MESH:D019694","UMLS:C0524909"],"synonyms":[{"name":"chronic Hepatitis B","type":"exact"},{"name":"hepatitis B infection, chronic","type":"exact"},{"name":"hepatitis B, chronic","type":"exact"}],"termid":"MONDO:0005366","xrefs":{"Monarch":{"xref_id":"0005366"}}}


id: PBO:0003647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphate aminotransferase imidazole acetol phosphate transaminase His3","termid":"PBO:0003647"}


id: PBO:0081042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing, antiviral 1","termid":"PBO:0081042"}


id: PBO:0080302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 66 pseudogene","termid":"PBO:0080302"}


id: PBO:0047728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructosamine 3 kinase","termid":"PBO:0047728"}


id: PBO:0083097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-responsive protein; expression is increased in response to heat-shock stress or treatments that produce DNA lesions; contains multiple repeats of the amino acid sequence NNNDSYGS; protein abundance increases in response to DNA replication stress","termid":"PBO:0083097"}


id: PBO:0064677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 13","termid":"PBO:0064677"}


id: PBO:0029566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_structure","termid":"PBO:0029566"}


id: PBO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 27","termid":"PBO:0062043"}


id: GO:0090516
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103624],"is_not":false,"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine transport","termid":"GO:0015825"},{"relation_name":"is_a","term_name":"neutral amino acid transmembrane import into vacuole","termid":"GO:0034491"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-serine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090516","terms_by_termid":{"GO:0090516":null}}


id: MONDO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vascular disorder characterized by thickening and hardening of the walls of the arteries.","definition_xrefs":["NCIT:C34398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteriosclerosis disorder","secondary_identifiers":["HP:0002634","MESH:D001161","DOID:2349","DOID:2348","CSP:0571-2299","MEDGEN:2076","SCTID:72092001","UMLS:C0003850","NCIT:C34403","ICD9:440"],"synonyms":[{"name":"arterial sclerosis","type":"exact"},{"name":"arteriosclerosis","type":"exact"},{"name":"arteriosclerotic cardiovascular disease","type":"exact"},{"name":"arteriosclerotic vascular disease","type":"exact"},{"name":"cardiovascular arteriosclerosis","type":"exact"},{"name":"vascular sclerosis","type":"exact"}],"termid":"MONDO:0002277","xrefs":{"Monarch":{"xref_id":"0002277"}}}


id: SO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic rRNA is an RNA component of the small or large subunits of cytosolic ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA","synonyms":[{"name":"cytosolic rRNA","type":"exact"},{"name":"cytosolic ribosomal RNA","type":"exact"}],"termid":"SO:0002343"}


id: PBO:0074368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm mitochondria associated cysteine rich protein","termid":"PBO:0074368"}


id: FYPO:0002587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any mitochondrially-encoded polycistronic RNA precursors measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of mitochondrial polycistronic RNA precursors","synonyms":[{"name":"increased accumulation of mitochondrial polycistronic RNA precursors","type":"related"},{"name":"increased level of mitochondrial polycistronic RNA precursors during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial polycistronic RNA precursors during vegetative growth","type":"exact"}],"termid":"FYPO:0002587"}


id: GO:0080061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetonitrile + 2 H2O = indole-3-acetic acid + NH3.","definition_xrefs":["RHEA:45776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetonitrile nitrilase activity","secondary_identifiers":["MetaCyc:RXN-1404"],"termid":"GO:0080061"}


id: PBO:0044742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 20","termid":"PBO:0044742"}


id: GO:1904378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining an endoplasmic reticulum (ER) protein in an unfolded, soluble state that contributes to its degradation by the cytoplasmic proteasome. Maintaining ER-resident proteins in an unfolded yet soluble state condition after their retro-translocation favors their turnover by the cytosolic proteasome.","definition_xrefs":["GOC:TermGenie","GOC:nc","PMID:21636303","GOC:bf","GO_REF:0000060","GOC:PARL","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of unfolded protein","termid":"GO:0036506"},{"relation_name":"part_of","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"maintenance of unfolded protein involved in ERAD pathway","synonyms":[{"name":"ERAD chaperone-like activity","type":"related"},{"name":"chaperone holdase activity","type":"related"},{"name":"holdase activity","type":"related"},{"name":"maintenance of unfolded protein during ERAD","type":"related"},{"name":"maintenance of unfolded protein involved in ER-associated degradation pathway","type":"related"},{"name":"maintenance of unfolded protein involved in endoplasmic reticulum-associated degradation","type":"exact"},{"name":"maintenance of unfolded protein involved in endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904378"}


id: PBO:0028232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_salt_stress","termid":"PBO:0028232"}


id: GO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of phosphorylation of viral or host proteins in a host.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein phosphorylation (obsolete GO:0039612)","termid":"GO:0039612"}


id: GO:0006968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense response that is mediated by cells.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular defense response","secondary_identifiers":["GO:0016066","GO:0016067","GO:0002818"],"synonyms":[{"name":"cellular defence response","type":"exact"},{"name":"intracellular defence response","type":"narrow"},{"name":"intracellular defense response","type":"narrow"}],"termid":"GO:0006968"}


id: FYPO:0001125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal vegetative cell shape","synonyms":[{"name":"normal cell shape during vegetative growth","type":"exact"},{"name":"normal vegetative cell shape during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001125"}


id: GO:0102084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-dopa + S-adenosyl-L-methionine = 3-O-methyldopa + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete L-dopa O-methyltransferase activity (obsolete GO:0102084)","termid":"GO:0102084"}


id: PBO:0082378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic zinc-finger protein; similar to human and mouse Kin17 proteins which are chromatin-associated proteins involved in UV response and DNA replication","termid":"PBO:0082378"}


id: FYPO:0003694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 18S ribosomal RNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature rRNA level","termid":"FYPO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased mature 18S rRNA level","synonyms":[{"name":"decreased 18S rRNA level","type":"broad"},{"name":"decreased mature 18S rRNA accumulation","type":"related"},{"name":"decreased mature 18S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature 18S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 18S rRNA transcript level","type":"exact"},{"name":"reduced mature 18S rRNA level","type":"exact"}],"termid":"FYPO:0003694"}


id: MONDO:0001004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by exposure to slate dust.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slate pneumoconiosis","secondary_identifiers":["UMLS:C0340186","MEDGEN:83300","ICD9:502","SCTID:1259003","NCIT:C35397","DOID:10330"],"synonyms":[{"name":"Schistosis","type":"exact"}],"termid":"MONDO:0001004","xrefs":{"Monarch":{"xref_id":"0001004"}}}


id: MONDO:0018431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal recessive hereditary sensory and autonomic neuropathy (obsolete MONDO:0015366)","termid":"MONDO:0015366"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"cold-induced sweating syndrome - hyperthermia spectrum","secondary_identifiers":["GARD:21708","MEDGEN:1842440","UMLS:C5681139","Orphanet:401993"],"termid":"MONDO:0018431","xrefs":{"Monarch":{"xref_id":"0018431"}}}


id: PBO:0061155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 3","termid":"PBO:0061155"}


id: GO:0033568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lactoferrin and delivering lactoferrin into the cell via endocytosis. Lactoferrin is an iron-binding glycoprotein which binds ferric iron most efficiently at low pH.","definition_xrefs":["PMID:16261254","GOC:mlg","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"lactoferrin receptor activity","termid":"GO:0033568"}


id: GO:1901528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any hydrogen peroxide mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen peroxide mediated signaling pathway involved in stomatal movement (obsolete GO:1901528)","synonyms":[{"name":"H2O2 mediated signaling pathway involved in stomatal movement","type":"exact"},{"name":"hydrogen peroxide mediated signalling pathway involved in stomatal movement","type":"exact"}],"termid":"GO:1901528"}


id: MONDO:0006326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma arising from and extending beyond the structures of the eye.","definition_xrefs":["NCIT:C7913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"ocular melanoma with extraocular extension","secondary_identifiers":["MEDGEN:75884","UMLS:C0278869"],"synonyms":[{"name":"extraocular extension melanoma","type":"exact"},{"name":"extraocular extension of melanoma","type":"exact"},{"name":"ocular melanoma with extraocular extension","type":"exact"}],"termid":"MONDO:0006326","xrefs":{"Monarch":{"xref_id":"0006326"}}}


id: PBO:0086621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086621"}


id: PBO:0049476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.0 linker histone","termid":"PBO:0049476"}


id: GO:0047287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-D-galactoside + CMP-N-acetyl-beta-neuraminate = an N-acetyl-alpha-neuraminyl-(2->6)-beta-D-galactosyl derivative + CMP + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactosylceramide alpha-2,6-N-sialyltransferase activity (obsolete GO:0047287)","termid":"GO:0047287"}


id: PBO:0044969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHRSX intronic transcript 1","termid":"PBO:0044969"}


id: PBO:0050642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 7, pseudogene","termid":"PBO:0050642"}


id: GO:0016729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, NAD, NADP or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on CH2 groups, other acceptors (obsolete GO:0016729)","synonyms":[{"name":"oxidoreductase activity, acting on CH2 groups, other acceptors","type":"exact"}],"termid":"GO:0016729"}


id: PBO:0049156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 2A","termid":"PBO:0049156"}


id: PBO:0055801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 3","termid":"PBO:0055801"}


id: GO:0034633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of retinol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"retinol transport","synonyms":[{"name":"vitamin A1 transport","type":"exact"}],"termid":"GO:0034633"}


id: MONDO:0100247
data:
  {"annotated_genes":["SJAG_03066","SJAG_04165","SJAG_04881","SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032808"},{"annotations":[85720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013563"},{"annotations":[86649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010466"},{"annotations":[85715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014165"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_03066":null,"SJAG_04165":null,"SJAG_04881":null},"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies-hypotonia-seizures syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:614080","UMLS:C5191419","DOID:0080503","MEDGEN:1683744"],"termid":"MONDO:0100247","terms_by_termid":{"MONDO:0010466":null,"MONDO:0013563":null,"MONDO:0014165":null,"MONDO:0032808":null},"xrefs":{"Monarch":{"xref_id":"0100247"}}}


id: GO:0051845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of immune avoidance that does not directly interfere with the symbiont immune system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"gene_count":0,"genotype_count":0,"name":"obsolete passive evasion of symbiont immune response (obsolete GO:0051845)","synonyms":[{"name":"passive evasion of symbiont immune response","type":"exact"},{"name":"passive immune evasion","type":"broad"}],"termid":"GO:0051845"}


id: MONDO:0007450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary central diabetes insipidus is a rare genetic subtype of central diabetes insipidus (CDI) characterized by polyuria and polydipsia due to a deficiency in vasopressin (AVP) synthesis.","definition_xrefs":["Orphanet:30925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"},{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"},{"relation_name":"is_a","term_name":"central diabetes insipidus","termid":"MONDO:0015790"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"neurohypophyseal diabetes insipidus","secondary_identifiers":["NANDO:2201050","OMIM:125700","icd11.foundation:97299603","GARD:16629","SCTID:45369008","UMLS:C0342394","NCIT:C84933","DOID:12388","MEDGEN:574999"],"synonyms":[{"name":"ADH deficiency","type":"exact"},{"name":"AVP deficiency","type":"exact"},{"name":"Arginine vasopressin deficiency","type":"exact"},{"name":"antidiuretic hormone deficiency","type":"exact"},{"name":"diabetes insipidus of pituitary gland","type":"exact"},{"name":"diabetes insipidus, cranial type","type":"related"},{"name":"diabetes insipidus, neurohypophyseal","type":"related"},{"name":"diabetes insipidus, primary central","type":"related"},{"name":"hereditary CDI","type":"exact"},{"name":"hereditary central diabetes insipidus","type":"related"},{"name":"hereditary neurogenic diabetes insipidus","type":"exact"},{"name":"neurogenic diabetes insipidus","type":"related"},{"name":"pituitary diabetes insipidus","type":"exact"},{"name":"pituitary gland diabetes insipidus","type":"exact"},{"name":"vasopressin defective diabetes insipidus","type":"exact"},{"name":"vasopressin deficiency","type":"exact"}],"termid":"MONDO:0007450","xrefs":{"Monarch":{"xref_id":"0007450"}}}


id: MONDO:0009682
data:
  {"annotated_genes":["SJAG_00804","SJAG_02103"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85513,85514],"is_not":false,"summary":null,"term":"MONDO:0009682"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00804":null,"SJAG_02103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy, congenital, with rapid progression","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:254100","MEDGEN:338135","MESH:C564983","UMLS:C1850840"],"synonyms":[{"name":"muscular dystrophy, congenital, with rapid progression","type":"exact"}],"termid":"MONDO:0009682","terms_by_termid":{"MONDO:0009682":null},"xrefs":{"Monarch":{"xref_id":"0009682"}}}


id: GO:0047085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylacetonitrile + H+ + NADPH + O2 = 4-hydroxymandelonitrile + H2O + NADP+.","definition_xrefs":["RHEA:50732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyphenylacetonitrile 2-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.42-RXN","KEGG_REACTION:R02708"],"synonyms":[{"name":"4-hydroxyphenylacetonitrile hydroxylase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile monooxygenase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"exact"}],"termid":"GO:0047085"}


id: PATO:0001093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001093 relative flux value (obsolete PATO:0001093)","termid":"PATO:0001093"}


id: GO:1904065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled acetylcholine receptor signaling pathway that is involved in positive regulation of acetylcholine secretion, neurotransmission.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22588719","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"},{"relation_name":"part_of","term_name":"positive regulation of acetylcholine secretion, neurotransmission","termid":"GO:0014057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in positive regulation of acetylcholine secretion, neurotransmission","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in activation of acetylcholine secretion","type":"narrow"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in positive regulation of acetylcholine secretion, neurotransmission","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in stimulation of acetylcholine secretion","type":"narrow"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in up regulation of acetylcholine secretion","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in up-regulation of acetylcholine secretion","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in upregulation of acetylcholine secretion","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in activation of acetylcholine secretion","type":"narrow"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in positive regulation of acetylcholine secretion, neurotransmission","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in stimulation of acetylcholine secretion","type":"narrow"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in up regulation of acetylcholine secretion","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in up-regulation of acetylcholine secretion","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in upregulation of acetylcholine secretion","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in activation of acetylcholine secretion","type":"narrow"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in positive regulation of acetylcholine secretion, neurotransmission","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in stimulation of acetylcholine secretion","type":"narrow"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in up regulation of acetylcholine secretion","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in up-regulation of acetylcholine secretion","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in upregulation of acetylcholine secretion","type":"exact"}],"termid":"GO:1904065"}


id: PBO:0067049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 69, pseudogene","termid":"PBO:0067049"}


id: GO:0030072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a peptide hormone from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"peptide hormone secretion","termid":"GO:0030072"}


id: MONDO:0012241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive external ophthalmoplegia with mitochondrial DNA deletions in which the cause of the disease is a mutation in the TWNK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant progressive external ophthalmoplegia","termid":"MONDO:0008003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0000426","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 3","secondary_identifiers":["GARD:16499","MEDGEN:373087","MESH:C563747","OMIM:609286","UMLS:C1836439","DOID:0111520"],"synonyms":[{"name":"PEOA3","type":"related"},{"name":"TWNK progressive external ophthalmoplegia with mitochondrial DNA deletions","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions caused by mutation in TWNK","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant type 3","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal dominant 3","type":"related"}],"termid":"MONDO:0012241","xrefs":{"Monarch":{"xref_id":"0012241"}}}


id: MONDO:0030941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 7","secondary_identifiers":["OMIM:619209","MEDGEN:1780408","UMLS:C5543106","GARD:18674"],"synonyms":[{"name":"EKVP7","type":"exact"},{"name":"erythrokeratodermia variabilis et progressiva 7","type":"exact"}],"termid":"MONDO:0030941","xrefs":{"Monarch":{"xref_id":"0030941"}}}


id: PBO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.48","termid":"PBO:0000910"}


id: GO:0045438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the formation of delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine from constituent amino acids and ATP in the presence of magnesium ions and dithioerythritol.","definition_xrefs":["PMID:1572368","PMID:2061333"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase activity (obsolete GO:0045438)","synonyms":[{"name":"ACV synthetase activity","type":"broad"}],"termid":"GO:0045438"}


id: PBO:0051668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactivation escape 2","termid":"PBO:0051668"}


id: MONDO:0011669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome including neonatal and infantile hypotonia and failure to thrive, cystinuria type 1 and nephrolithiasis, growth retardation due to growth hormone deficiency, and minor facial dysmorphism.","definition_xrefs":["Orphanet:163690"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 2","termid":"MONDO:0016884"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hypotonia-cystinuria syndrome","secondary_identifiers":["GARD:16998","SCTID:721173005","icd11.foundation:1742079513","UMLS:C1848030","Orphanet:238517","MESH:C564710","icd11.foundation:1852649756","DOID:0060858","MEDGEN:341133","OMIM:606407"],"synonyms":[{"name":"HCS","type":"exact"},{"name":"cystinuria with mitochondrial disease","type":"exact"},{"name":"homozygous 2P16 deletion syndrome","type":"related"},{"name":"homozygous 2P16 deletion syndrome, formerly","type":"related"},{"name":"homozygous 2P21 deletion syndrome","type":"related"},{"name":"hypotonia-cystinuria syndrome","type":"exact"},{"name":"hypotonia-cystinuria syndrome type 1","type":"exact"},{"name":"hypotonia-cystinuria type 1 syndrome","type":"exact"}],"termid":"MONDO:0011669","xrefs":{"Monarch":{"xref_id":"0011669"}}}


id: PR:Q10434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-actin-capping protein subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin-capping protein subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.07","secondary_identifiers":["UniProtKB:Q10434"],"synonyms":[{"name":"SPAC12B10.07","type":"related"},{"name":"Spom972h-CAPZA2","type":"exact"}],"termid":"PR:Q10434"}


id: PR:O43020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02505","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S16, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.06","secondary_identifiers":["UniProtKB:O43020"],"synonyms":[{"name":"Spom972h-rpsP","type":"exact"}],"termid":"PR:O43020"}


id: PBO:0062119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 46","termid":"PBO:0062119"}


id: PBO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphyria","termid":"PBO:0000225"}


id: PBO:0039333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, intestinal","termid":"PBO:0039333"}


id: PBO:0031614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_transport_during_vegetative_growth","termid":"PBO:0031614"}


id: PBO:0082602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin light chain; subunit of the major coat protein involved in intracellular protein transport and endocytosis; regulates endocytic progression; thought to regulate clathrin function; the clathrin triskelion is a trimeric molecule composed of three heavy chains that radiate from a vertex and three light chains which bind noncovalently near the vertex of the triskelion","termid":"PBO:0082602"}


id: FYPO:0002902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during vegetative growth","synonyms":[{"name":"decreased protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"decreased protein localization to kinetochore during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to kinetochore during vegetative growth","type":"exact"}],"termid":"FYPO:0002902"}


id: GO:1901929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-copaene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-copaene metabolic process","synonyms":[{"name":"alpha-copaene metabolism","type":"exact"}],"termid":"GO:1901929"}


id: GO:0019242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylglyoxal biosynthetic process","synonyms":[{"name":"methylglyoxal anabolism","type":"exact"},{"name":"methylglyoxal biosynthesis","type":"exact"},{"name":"methylglyoxal formation","type":"exact"},{"name":"methylglyoxal synthesis","type":"exact"}],"termid":"GO:0019242"}


id: PBO:0088349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexitol dehydrogenase","termid":"PBO:0088349"}


id: MONDO:0700219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metastatic neoplasm in which the tumor cells spread to leptomeninges (pia and arachnoid) and subarachnoid space. The most common primary tumors metastasizing to the leptomeninges are breast and lung carcinomas, melanoma, aggressive non-Hodgkin lymphoma, and acute lymphocytic leukemia.","definition_xrefs":["PMID:29535794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"neoplastic meningitis","secondary_identifiers":["MEDGEN:352817","NCIT:C3814","UMLS:C1704231","icd11.foundation:262966673"],"synonyms":[{"name":"carcinomatous meningitis","type":"exact"},{"name":"leptomeningeal carcinoma","type":"exact"},{"name":"leptomeningeal carcinomatosis","type":"exact"},{"name":"leptomeningeal metastasis","type":"exact"},{"name":"meningeal carcinomatosis","type":"exact"},{"name":"meningeal metastasis","type":"exact"},{"name":"metastatic malignant neoplasm in the leptomeninges","type":"exact"}],"termid":"MONDO:0700219","xrefs":{"Monarch":{"xref_id":"0700219"}}}


id: PBO:0111534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flocculin-like protein","termid":"PBO:0111534"}


id: PBO:0068057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 362","termid":"PBO:0068057"}


id: PBO:0069893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1183, pseudogene","termid":"PBO:0069893"}


id: MONDO:0020420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the lumen of the right or left pulmonary artery branch.","definition_xrefs":["NCIT:C99144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary branch stenosis","secondary_identifiers":["UMLS:C3531782","Orphanet:99084","MEDGEN:758898","GARD:4589"],"synonyms":[{"name":"branch pulmonary artery stenosis","type":"exact"},{"name":"peripheral pulmonary stenosis","type":"related"},{"name":"pulmonary artery stenosis, branch (not PPS)","type":"exact"}],"termid":"MONDO:0020420","xrefs":{"Monarch":{"xref_id":"0020420"}}}


id: MONDO:0016653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"2q33.1 microdeletion syndrome is a rare chromosomal anomaly syndrome, resulting from the partial deletion of the long arm of chromosome 2, with a highly variable phenotype typically characterized by severe intellectual disability, moderate to severe developmental delay (particularly speech), feeding difficulties, failure to thrive, hypotonia, thin, sparse hair, various dental abnormalities and cleft/high-arched palate. Typical dysmorphic features include high, prominent forehead, down-slanting palpebral fissures and prominent nasal bridge with beaked nose. Various behavioral problems (e.g. hyperactivity, chaotic/repetitive behavior, touch avoidance) are also associated.","definition_xrefs":["Orphanet:251028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2q33.1 microdeletion syndrome","secondary_identifiers":["MEDGEN:1645054","SCTID:763062006","UMLS:C4706258","GARD:17204","DECIPHER:51"],"synonyms":[{"name":"Del(2)(q33.1)","type":"exact"},{"name":"monosomy 2q33.1","type":"exact"}],"termid":"MONDO:0016653","xrefs":{"Monarch":{"xref_id":"0016653"}}}


id: PBO:0061566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase","termid":"PBO:0061566"}


id: FYPO:0005469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and eventually lyses.","definition_xrefs":["PomBase:mah","PMID:8978670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, lysed cell","synonyms":[{"name":"inviable after spore germination, undivided lysed cell","type":"exact"},{"name":"inviable following spore germination, without cell division, with cell lysis","type":"exact"},{"name":"inviable germinated spore, without cell division, with cell lysis","type":"exact"},{"name":"lethal after spore germination, without cell division, with cell lysis","type":"exact"}],"termid":"FYPO:0005469"}


id: MONDO:0004526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm of the uterine corpus. Representative examples include leiomyoma, leiomyosarcoma, and endometrial stromal sarcoma.","definition_xrefs":["NCIT:C40179"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed endometrial stromal and smooth muscle tumor","secondary_identifiers":["NCIT:C40178","UMLS:C1513364","MEDGEN:269077","DOID:8302"],"synonyms":[{"name":"Stromomyoma","type":"exact"},{"name":"mixed endometrial stromal and smooth muscle neoplasm","type":"exact"},{"name":"uterine corpus soft tissue neoplasm","type":"exact"}],"termid":"MONDO:0004526","xrefs":{"Monarch":{"xref_id":"0004526"}}}


id: PBO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease Sxa1","termid":"PBO:0002000"}


id: PBO:0044443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 12","termid":"PBO:0044443"}


id: GO:1990049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neuronal dense core vesicles along axonal microtubules towards the cell body.","definition_xrefs":["PMID:23358451","GOC:kmv","PMID:24762653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"dense core granule cytoskeletal transport","termid":"GO:0099519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"retrograde neuronal dense core vesicle transport","synonyms":[{"name":"retrograde dense core granule trafficking","type":"exact"},{"name":"retrograde dense core granule transport","type":"exact"}],"termid":"GO:1990049"}


id: GO:0097445
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron dense projection extending from the cytomatrix into the cytoplasm on which synaptic vesicles are tethered.","definition_xrefs":["NIF_Subcellular:sao494258938","PMID:15381754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone dense projection","synonyms":[{"name":"active zone dense projection","type":"exact"},{"name":"pre-synaptic active zone dense projection","type":"exact"}],"termid":"GO:0097445"}


id: GO:0034657
data:
  {"annotated_genes":["SJAG_04309","SJAG_01637","SJAG_01678","SJAG_03385","SJAG_02197","SJAG_01886","SJAG_01472"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70594,77105,78778,79763,80029,88037,114054],"is_not":false,"summary":null,"term":"GO:0034657"}]},"cv_name":"cellular_component","definition":"A protein complex with ubiquitin ligase activity that, in Saccharomyces cerevisiae, is involved in proteasomal degradation of fructose-1,6-bisphosphatase (FBPase) and phosphoenolpyruvate carboxykinase during the transition from gluconeogenic to glycolytic growth conditions. It appears to play a broader role in cellular homeostasis and development in other species.","definition_xrefs":["PMID:18508925","PMID:35682545","PMID:12686616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01472":null,"SJAG_01637":null,"SJAG_01678":null,"SJAG_01886":null,"SJAG_02197":null,"SJAG_03385":null,"SJAG_04309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GID complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal to LisH complex","type":"exact"},{"name":"CTLH complex","type":"exact"}],"termid":"GO:0034657","terms_by_termid":{"GO:0034657":null}}


id: PBO:0082084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; one of five related enzymes, which are active as heteromultimeric complexes","termid":"PBO:0082084"}


id: PR:Q9URZ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma11 gene.","definition_xrefs":["UniProtKB:Q9URZ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase 16 kDa proteolipid subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC732.01","synonyms":[{"name":"Spom972h-vma11","type":"exact"},{"name":"V-ATPase 16 kDa proteolipid subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"proteolipid protein vma11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump 16 kDa proteolipid subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ8"}


id: FYPO:0003291
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein does not contain galactose residues. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PMID:9125114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0003290","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"galactose absent from glycoprotein glycan","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"alpha 1,2-linked galactose residues absent from glycoprotein","type":"exact"},{"name":"galactose absent from glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0003291","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PR:O74886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC576.02 gene.","definition_xrefs":["UniProtKB:O74886","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C576.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.02","synonyms":[{"name":"Spom972h-SPCC576.02","type":"exact"}],"termid":"PR:O74886"}


id: PBO:0039887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 4","termid":"PBO:0039887"}


id: MONDO:0007138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 1","secondary_identifiers":["DOID:0060605","MEDGEN:1631197","UMLS:C4551992","DOID:0080606","OMIM:107250"],"synonyms":[{"name":"ASGD1","type":"related"},{"name":"ASMD","type":"related"},{"name":"anterior segment dysgenesis 1","type":"exact"},{"name":"anterior segment dysgenesis 1, multiple subtypes","type":"exact"},{"name":"anterior segment mesenchymal dysgenesis","type":"related"},{"name":"anterior segment ocular dysgenesis","type":"related"}],"termid":"MONDO:0007138","xrefs":{"Monarch":{"xref_id":"0007138"}}}


id: PBO:0088903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get1","termid":"PBO:0088903"}


id: MONDO:0004922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an impairment in the development of an individual's motor coordination skills; this impairment in motor development is not due to a medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental coordination disorder","secondary_identifiers":["NCIT:C92561","SCTID:27544004","ICD9:315.4","MESH:D019957","UMLS:C0011757","DOID:9923","MEDGEN:41511"],"synonyms":[{"name":"clumsy child syndrome","type":"exact"},{"name":"development coordination disorder","type":"exact"},{"name":"developmental dyspraxia","type":"exact"}],"termid":"MONDO:0004922","xrefs":{"Monarch":{"xref_id":"0004922"}}}


id: PBO:0029829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_septated_vegetative_cell_population_(obsolete_FYPO:0002408)","termid":"PBO:0029829"}


id: GO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabino-3-hexulose 6-phosphate = D-fructose 6-phosphate.","definition_xrefs":["PMID:11839305","MetaCyc:R12-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hexulose-6-phosphate isomerase activity","secondary_identifiers":["EC:5.3.1.27","RHEA:25900"],"synonyms":[{"name":"HUMPI","type":"exact"}],"termid":"GO:0043800"}


id: PBO:0062010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily J member 4 pseudogene","termid":"PBO:0062010"}


id: PBO:0012041
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lives if zapped","termid":"PBO:0012041"}


id: GO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an acute inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acute inflammatory response","termid":"GO:0002673"}


id: PBO:0055538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2974","termid":"PBO:0055538"}


id: MONDO:0014154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive intermediate Charcot-Marie-Tooth disease type C is a rare subtype of autosomal recessive intermediate Charcot-Marie-Tooth (CMT) disease characterized by childhood to adulthood-onset of progressive, moderate to severe, predominantly distal, mostly lower limb muscle weakness and atrophy, foot deformities (including pes cavus and hammer toes), absent deep tendon reflexes and distal sensory loss associated with decreased motor and sensory nerve conduction velocities and features of both demyelinating and axonal neuropathy on sural nerve biopsy.","definition_xrefs":["Orphanet:369867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0017058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease recessive intermediate C","secondary_identifiers":["DOID:0110198","MEDGEN:815639","UMLS:C3809309","OMIM:615376","GARD:17587"],"synonyms":[{"name":"CMTRIC","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in PLEKHG5","type":"exact"},{"name":"Charcot-Marie-Tooth disease recessive intermediate type C","type":"exact"},{"name":"Charcot-Marie-Tooth disease, recessive Intermediate type C","type":"exact"},{"name":"Charcot-Marie-Tooth disease, recessive intermediate C","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy, recessive Intermediate C","type":"related"},{"name":"PLEKHG5 Charcot-Marie-Tooth disease","type":"exact"},{"name":"RI-CMT type C","type":"exact"},{"name":"RI-CMTC","type":"exact"},{"name":"autosomal recessive intermediate Charcot-Marie-Tooth disease type C","type":"exact"}],"termid":"MONDO:0014154","xrefs":{"Monarch":{"xref_id":"0014154"}}}


id: MONDO:0009503
data:
  {"annotated_genes":["SJAG_00866"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86530],"is_not":false,"summary":null,"term":"MONDO:0009503"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase E3-binding protein deficiency is a rare mild form of pyruvate dehydrogenase deficiency (PDHD) characterized by variable lactic acidosis and neurological dysfunction.","definition_xrefs":["Orphanet:255182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0037792","MONDO:0004069"],"is_obsolete":false,"name":"pyruvate dehydrogenase E3-binding protein deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:343383","GARD:17237","MESH:C565447","UMLS:C1855553","OMIM:245349"],"synonyms":[{"name":"2-oxoglutarate complex deficiency","type":"exact"},{"name":"Glycine cleavage system L protein deficiency","type":"exact"},{"name":"PDHXD","type":"related"},{"name":"branched chain alpha-ketoacid dehydrogenase complex deficiency","type":"exact"},{"name":"diaphorase deficiency","type":"exact"},{"name":"dihydrolipoyl dehydrogenase deficiency","type":"exact"},{"name":"lactic acidemia due to defect in lipoyl-containing component 10 of the pyruvate dehydrogenase Complex","type":"related"},{"name":"lacticacidemia due to PDX1 deficiency","type":"exact"},{"name":"lipoamide dehydrogenase deficiency","type":"exact"},{"name":"pyruvate dehydrogenase E3-binding PROTEIN deficiency","type":"related"},{"name":"pyruvate dehydrogenase E3-binding protein deficiency","type":"exact"},{"name":"pyruvate dehydrogenase complex component E3 deficiency","type":"exact"},{"name":"pyruvate dehydrogenase protein X component deficiency","type":"exact"}],"termid":"MONDO:0009503","terms_by_termid":{"MONDO:0009503":null},"xrefs":{"Monarch":{"xref_id":"0009503"}}}


id: PBO:0065201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 31","termid":"PBO:0065201"}


id: GO:0004277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins, including fibronectin, type IV collagen and nucleolin. Preferential cleavage: Arg-Xaa > Lys-Xaa > Phe-Xaa in small molecule substrates.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete granzyme A activity (obsolete GO:0004277)","synonyms":[{"name":"CTLA3","type":"related"},{"name":"HuTPS","type":"related"},{"name":"T-cell associated protease 1","type":"related"},{"name":"T-cell derived serine proteinase","type":"narrow"},{"name":"TSP-1","type":"related"},{"name":"cytotoxic T lymphocyte serine protease","type":"narrow"},{"name":"cytotoxic T-lymphocyte proteinase 1 activity","type":"narrow"},{"name":"granzyme A activity","type":"exact"}],"termid":"GO:0004277"}


id: GO:0007355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specification of the anterior (head and thoracic segments) of the embryo by the gap genes; exemplified in insects by the actions of hunchback gene product.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior region determination","termid":"GO:0007355"}


id: PBO:0068084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 390","termid":"PBO:0068084"}


id: MONDO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually benign tumor arising from the breast. It is characterized by the proliferation of cells with myoepithelial differentiation around spaces which are lined by epithelial cells. Rarely, the epithelial and/or myoepithelial cells may undergo malignant transformation. Cases with malignant transformation may follow an aggressive clinical course, including recurrences and local and distant metastases.","definition_xrefs":["NCIT:C6899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast myoepithelial tumor","termid":"MONDO:0002483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast adenomyoepithelioma","secondary_identifiers":["DOID:1642","MEDGEN:267278","ICDO:8983/0","ONCOTREE:BRAME","UMLS:C1510795"],"synonyms":[{"name":"BRAME","type":"related"},{"name":"adenomyoepithelioma of the breast","type":"exact"},{"name":"breast adenomyoepithelioma","type":"exact"},{"name":"breast adenomyoepithelioma with malignant change","type":"exact"},{"name":"malignant adenomyoepithelioma of breast","type":"exact"}],"termid":"MONDO:0002066","xrefs":{"Monarch":{"xref_id":"0002066"}}}


id: PBO:0068296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 2 pseudogene 1","termid":"PBO:0068296"}


id: PBO:0088010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p; shuttles between cytosol and nucleus; mediates delivery of misfolded proteins into the nucleus for degradation; involved in proteasomal degradation of misfolded cytosolic proteins; protein abundance increases in response to DNA replication stress; polyQ aggregates sequester Sis1p and interfere with clearance of misfolded proteins; similar to bacterial DnaJ proteins and mammalian DnaJB1","termid":"PBO:0088010"}


id: GO:1904891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of excitatory synapse assembly.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:21670302","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synapse assembly","termid":"GO:0051965"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"positively_regulates","term_name":"excitatory synapse assembly","termid":"GO:1904861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of excitatory synapse assembly","synonyms":[{"name":"activation of excitatory synapse assembly","type":"narrow"},{"name":"activation of excitatory synapse formation","type":"narrow"},{"name":"positive regulation of excitatory synapse formation","type":"exact"},{"name":"up regulation of excitatory synapse assembly","type":"exact"},{"name":"up regulation of excitatory synapse formation","type":"exact"},{"name":"up-regulation of excitatory synapse assembly","type":"exact"},{"name":"up-regulation of excitatory synapse formation","type":"exact"},{"name":"upregulation of excitatory synapse assembly","type":"exact"},{"name":"upregulation of excitatory synapse formation","type":"exact"}],"termid":"GO:1904891"}


id: PBO:0044309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 4","termid":"PBO:0044309"}


id: GO:1902920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(hydroxyvalerate).","definition_xrefs":["PMID:21705209","GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) metabolic process","termid":"GO:1901440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyvalerate) metabolic process","synonyms":[{"name":"poly(hydroxyvalerate) metabolism","type":"exact"}],"termid":"GO:1902920"}


id: PBO:0042745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPS-CORT readthrough","termid":"PBO:0042745"}


id: PBO:0065181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein S","termid":"PBO:0065181"}


id: GO:0009110
data:
  {"annotated_genes":["SJAG_00106","SJAG_03275","SJAG_00376","SJAG_00252","SJAG_04481","SJAG_00691","SJAG_00815","SJAG_03632","SJAG_00707","SJAG_00480","SJAG_02408","SJAG_01935","SJAG_00827","SJAG_01126","SJAG_02491","SJAG_00283","SJAG_01543","SJAG_04866","SJAG_03538","SJAG_02360","SJAG_01054","SJAG_02420","SJAG_04845","SJAG_00381","SJAG_02406","SJAG_04282","SJAG_01970","SJAG_05200","SJAG_02421","SJAG_01881","SJAG_03679","SJAG_00043","SJAG_04156","SJAG_00673","SJAG_00491","SJAG_04711","SJAG_03362","SJAG_02225","SJAG_04067","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[79152,75947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[56915,60426,68600,104581,105882,108147,112211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[71927,88638,102543,113176,77279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[113487,88784],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[77896,74908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[114194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[75225,63834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[111624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[75228,63831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[59883,77674,116981,65521,78455,60409,76213,70926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[61331,73609,69662,73714,76793,78189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[77979,113399,115830,113393,67098,65329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[110245,99314,110246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00252":null,"SJAG_00283":null,"SJAG_00376":null,"SJAG_00381":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00815":null,"SJAG_00827":null,"SJAG_01054":null,"SJAG_01126":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_01935":null,"SJAG_01970":null,"SJAG_02225":null,"SJAG_02360":null,"SJAG_02406":null,"SJAG_02408":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02491":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04067":null,"SJAG_04156":null,"SJAG_04282":null,"SJAG_04481":null,"SJAG_04711":null,"SJAG_04845":null,"SJAG_04866":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"vitamin anabolism","type":"exact"},{"name":"vitamin biosynthesis","type":"exact"},{"name":"vitamin formation","type":"exact"},{"name":"vitamin synthesis","type":"exact"}],"termid":"GO:0009110","terms_by_termid":{"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042821":null,"GO:0042823":null,"GO:0046656":null,"GO:0090180":null}}


id: MONDO:0016110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A group of rare skeletal muscle ion-channel disorders caused by genetic mutations in the sodium and chloride channel genes. It is characterized by altered membrane excitability resulting in skeletal muscle stiffness. This group of myotonias is distinct from myotonic dystrophy because of the absence of systemic features or progressive weakness.","definition_xrefs":["NCIT:C122787"],"gene_count":0,"genotype_count":0,"name":"obsolete non-dystrophic myopathy (obsolete MONDO:0016110)","secondary_identifiers":["NANDO:1200496","Orphanet:206656","SCTID:424795008"],"synonyms":[{"name":"non dystrophic myotonia","type":"exact"},{"name":"non-dystrophic myotonia","type":"exact"}],"termid":"MONDO:0016110","xrefs":{"Monarch":{"xref_id":"0016110"}}}


id: GO:0006643
data:
  {"annotated_genes":["SJAG_05311","SJAG_05327","SJAG_03076","SJAG_01857","SJAG_03115","SJAG_04550","SJAG_03015","SJAG_04924","SJAG_01219","SJAG_02056","SJAG_01227","SJAG_02913","SJAG_02804","SJAG_03878","SJAG_00846","SJAG_01570","SJAG_00261","SJAG_00519","SJAG_00068","SJAG_04107","SJAG_02523","SJAG_03292","SJAG_06425","SJAG_04578","SJAG_02429","SJAG_02776","SJAG_01300","SJAG_03801","SJAG_04913","SJAG_02085","SJAG_04178","SJAG_04986","SJAG_06383","SJAG_04881","SJAG_04165","SJAG_00880","SJAG_03953","SJAG_04119","SJAG_02168","SJAG_00630","SJAG_00295","SJAG_03672","SJAG_01860","SJAG_00506","SJAG_04878","SJAG_01356","SJAG_01416","SJAG_01057","SJAG_03690","SJAG_02305","SJAG_03066","SJAG_00831","SJAG_02706","SJAG_03506","SJAG_02842","SJAG_02590","SJAG_02488","SJAG_02885","SJAG_05278","SJAG_04337","SJAG_00176","SJAG_04975"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110258],"is_not":false,"summary":null,"term":"GO:0006643"},{"annotations":[72489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006666"},{"annotations":[78660,78821,76607,108621,77746,73873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[72773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006672"},{"annotations":[76802,58151,58040,74530,92753,63192,72806,87182,71482,77612,103498,72994,75286,62276,57640,60206,57993,103560,89300,62851,76211,76108,77252,77989,77522,77245,72434,77255,69453,75309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[75800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006673"},{"annotations":[73442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[78991,112334,75258,91563,95012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[100528,110702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046467"},{"annotations":[89579,108622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"},{"annotations":[97984,109422,72490,117327,77376,93313,100032,73444,101202,91703,72775,73353,90352,94902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030148"},{"annotations":[71671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006665"},{"annotations":[105787,78659,73426,76606,96673,109515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving membrane lipids, any lipid found in or associated with a biological membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00176":null,"SJAG_00261":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00519":null,"SJAG_00630":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01227":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01857":null,"SJAG_01860":null,"SJAG_02056":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02590":null,"SJAG_02706":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_02913":null,"SJAG_03015":null,"SJAG_03066":null,"SJAG_03076":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03690":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04107":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04178":null,"SJAG_04337":null,"SJAG_04550":null,"SJAG_04578":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_04986":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"membrane lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"membrane lipid metabolism","type":"exact"}],"termid":"GO:0006643","terms_by_termid":{"GO:0006506":null,"GO:0006643":null,"GO:0006665":null,"GO:0006666":null,"GO:0006672":null,"GO:0006673":null,"GO:0006676":null,"GO:0030148":null,"GO:0046467":null,"GO:0046512":null,"GO:0046513":null,"GO:0046521":null,"GO:0051999":null}}


id: PBO:0029270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_binding","termid":"PBO:0029270"}


id: PBO:0030644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pH","termid":"PBO:0030644"}


id: PATO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001224 real number (obsolete PATO:0001224)","termid":"PATO:0001224"}


id: GO:0080173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial contact step made between the male gamete and the female gamete during double fertilization forming a zygote and endosperm. An example can be found in Arabidopsis thaliana.","definition_xrefs":["PMID:21123745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm","termid":"GO:0061936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"male-female gamete recognition during double fertilization forming a zygote and endosperm","synonyms":[{"name":"gamete recognition","type":"broad"},{"name":"male-female gamete recognition","type":"exact"}],"termid":"GO:0080173"}


id: PBO:0092031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucg), mitochondrial","termid":"PBO:0092031"}


id: PBO:0109114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 8, tRNA N3-cytidine","termid":"PBO:0109114"}


id: GO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of intermediate filaments by the addition of monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization or depolymerization","termid":"GO:0045108"},{"relation_name":"regulates","term_name":"intermediate filament polymerization","termid":"GO:0045107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of intermediate filament polymerization","termid":"GO:0030839"}


id: GO:0045951
data:
  {"annotated_genes":["SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79195],"is_not":false,"summary":null,"term":"GO:0045951"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination during mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"positive regulation of mitotic recombination","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"activation of mitotic recombination","type":"narrow"},{"name":"positive regulation of recombination within rDNA repeats","type":"narrow"},{"name":"stimulation of mitotic recombination","type":"narrow"},{"name":"up regulation of mitotic recombination","type":"exact"},{"name":"up-regulation of mitotic recombination","type":"exact"},{"name":"upregulation of mitotic recombination","type":"exact"}],"termid":"GO:0045951","terms_by_termid":{"GO:0045951":null}}


id: GO:0035907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the dorsal aorta over time, from its initial formation to the mature structure. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["GOC:bf","UBERON:0005805","Wikipedia:Aorta","GOC:dgh","ZFA:0000014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal aorta development","termid":"GO:0035907"}


id: GO:0061886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of mini excitatory postsynaptic potential. Mini excitatory postsynaptic potential is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell, induced by the spontaneous release of a single vesicle of an excitatory neurotransmitter into the synapse.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:20395454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mini excitatory postsynaptic potential","termid":"GO:0061884"},{"relation_name":"is_a","term_name":"negative regulation of excitatory postsynaptic potential","termid":"GO:0090394"},{"relation_name":"negatively_regulates","term_name":"mini excitatory postsynaptic potential","termid":"GO:0098816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mini excitatory postsynaptic potential","termid":"GO:0061886"}


id: PBO:0067944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 246","termid":"PBO:0067944"}


id: GO:1905103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the lysosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GO_REF:0000064","GOC:bf","GOC:TermGenie","PMID:26134396","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of lysosomal membrane (obsolete GO:1905103)","synonyms":[{"name":"integral component of lysosome membrane","type":"exact"},{"name":"integral to lysosomal membrane","type":"narrow"}],"termid":"GO:1905103"}


id: PATO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000257 absolute taste_acuity (obsolete PATO:0000257)","termid":"PATO:0000257"}


id: MOD:01013
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetramethylguanidinium termination by-product on amine","termid":"MOD:01013"}


id: GO:0060669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the embryonic placenta is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic placenta morphogenesis","termid":"GO:0060669"}


id: MONDO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A non-neoplastic or neoplastic disorder that affects the thorax and/or the organs of the thoracic cavity. Representative examples include pleural infection, mediastinitis, thymoma, mediastinal lymphoma, and pleural mesothelioma.","definition_xrefs":["NCIT:C35742"],"gene_count":0,"genotype_count":0,"name":"obsolete thoracic disorder (obsolete MONDO:0000651)","secondary_identifiers":["SCTID:118946009","DOID:0060118","MESH:D013896"],"synonyms":[{"name":"disease of thoracic segment of trunk","type":"exact"},{"name":"disease or disorder of thoracic segment of trunk","type":"exact"},{"name":"disorder of thoracic segment of trunk","type":"exact"},{"name":"disorder of thorax","type":"exact"},{"name":"thoracic disease","type":"exact"},{"name":"thoracic disorder","type":"exact"},{"name":"thoracic segment of trunk disease","type":"exact"},{"name":"thoracic segment of trunk disease or disorder","type":"exact"}],"termid":"MONDO:0000651","xrefs":{"Monarch":{"xref_id":"0000651"}}}


id: PBO:0046285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 3","termid":"PBO:0046285"}


id: PR:O94689
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.05 gene.","definition_xrefs":["UniProtKB:O94689","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial escape protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.05","synonyms":[{"name":"Spom972h-SPBC83.05","type":"exact"}],"termid":"PR:O94689"}


id: GO:0010054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a trichoblast, a root epidermal cell that will give rise to a root hair.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast differentiation","synonyms":[{"name":"trichoblast cell differentiation","type":"exact"}],"termid":"GO:0010054"}


id: PBO:0088319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mia40-Erv1 disulfide relay system thiol oxidase subunit Mia40","termid":"PBO:0088319"}


id: GO:1902154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA integrity checkpoint signaling","termid":"GO:1902152"},{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"positively_regulates","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to DNA damage checkpoint signaling","synonyms":[{"name":"activation of DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"positive regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"up regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"up-regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"upregulation of DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:1902154"}


id: PBO:0042903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1","termid":"PBO:0042903"}


id: PBO:0066225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 28","termid":"PBO:0066225"}


id: GO:0062034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-pipecolic acid, a metabolite of lysine.","definition_xrefs":["PMID:27758894","PMID:28330936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-pipecolic acid biosynthetic process","synonyms":[{"name":"L-pipecolate biosynthetic process","type":"exact"}],"termid":"GO:0062034"}


id: PBO:0074232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC47A1 pseudogene 1","termid":"PBO:0074232"}


id: PBO:0116227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane queuine and queuosine transmembrane importer, Qtp1","termid":"PBO:0116227"}


id: GO:0102720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + benzyl alcohol = benzyl acetate + CoA. Also converts (E)-cinnamyl alcohol into (E)-cinnamyl acetate.","definition_xrefs":["EC:2.3.1.224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"acetyl-coenzyme A:acetyl alcohol acetyltransferase activity","termid":"GO:0102720"}


id: GO:1901186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"positively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ERBB signaling pathway","synonyms":[{"name":"activation of EGF receptor family signaling pathway","type":"exact"},{"name":"activation of EGFR family signaling pathway","type":"related"},{"name":"activation of ERBB signaling pathway","type":"narrow"},{"name":"activation of ERBB signalling pathway","type":"exact"},{"name":"activation of ErbB signaling","type":"exact"},{"name":"positive regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"positive regulation of EGFR family signaling pathway","type":"related"},{"name":"positive regulation of ERBB signalling pathway","type":"exact"},{"name":"positive regulation of ErbB signaling","type":"exact"},{"name":"up regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up regulation of EGFR family signaling pathway","type":"related"},{"name":"up regulation of ERBB signaling pathway","type":"exact"},{"name":"up regulation of ERBB signalling pathway","type":"exact"},{"name":"up regulation of ErbB signaling","type":"exact"},{"name":"up-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up-regulation of EGFR family signaling pathway","type":"related"},{"name":"up-regulation of ERBB signaling pathway","type":"exact"},{"name":"up-regulation of ERBB signalling pathway","type":"exact"},{"name":"up-regulation of ErbB signaling","type":"exact"},{"name":"upregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"upregulation of EGFR family signaling pathway","type":"related"},{"name":"upregulation of ERBB signaling pathway","type":"exact"},{"name":"upregulation of ERBB signalling pathway","type":"exact"},{"name":"upregulation of ErbB signaling","type":"exact"}],"termid":"GO:1901186"}


id: PBO:0087057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L27B; homologous to mammalian ribosomal protein L27, no bacterial homolog; RPL27B has a paralog, RPL27A, that arose from the whole genome duplication","termid":"PBO:0087057"}


id: PBO:0087613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for tRNA gene clustering at the nucleolus; potential Cdc28p substrate","termid":"PBO:0087613"}


id: PBO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Pas1/PHO80 domain containing 1","termid":"PBO:0043477"}


id: GO:0044779
data:
  {"annotated_genes":["SJAG_03327","SJAG_01082","SJAG_01330","SJAG_04126","SJAG_04259","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114302,106115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116477,75000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[113589],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[101124],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell cycle checkpoint that delays the metaphase/anaphase transition of a meiotic nuclear division until the spindle is correctly assembled and that the chromosomes are attached to the spindle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle checkpoint signaling","termid":"GO:0031577"},{"relation_name":"is_a","term_name":"meiotic cell cycle checkpoint signaling","termid":"GO:0033313"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902103"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"meiotic spindle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902398"],"synonyms":[{"name":"intracellular signal transduction involved in meiotic spindle checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in meiotic spindle checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in meiotic spindle checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in meiotic spindle checkpoint","type":"exact"},{"name":"meiotic spindle checkpoint","type":"exact"}],"termid":"GO:0044779","terms_by_termid":{"GO:0033316":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: MONDO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy with microcephaly and mental subnormality","secondary_identifiers":["OMIM:271110","UMLS:C5935682","MEDGEN:1856346","MESH:C564806"],"synonyms":[{"name":"spinal muscular atrophy with microcephaly and mental subnormality","type":"exact"}],"termid":"MONDO:0010055","xrefs":{"Monarch":{"xref_id":"0010055"}}}


id: PBO:0070110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 24 pseudogene","termid":"PBO:0070110"}


id: GO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the relaxation of smooth muscle in a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in smooth muscle relaxation in another organism","synonyms":[{"name":"modulation of relaxation of smooth muscle in another organism","type":"related"},{"name":"modulation of relaxation of smooth muscle in other organism","type":"exact"},{"name":"regulation of relaxation of smooth muscle in other organism","type":"exact"}],"termid":"GO:0044617"}


id: GO:0046723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of malic acid, hydroxybutanedioic (hydroxysuccinic) acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transport","termid":"GO:0015743"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"malic acid secretion","synonyms":[{"name":"hydroxysuccinic acid secretion","type":"exact"},{"name":"malate secretion","type":"exact"}],"termid":"GO:0046723"}


id: FYPO:0003954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is decreased.","definition_xrefs":["GO:0019493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased triglyceride biosynthetic process","synonyms":[{"name":"decreased TAG biosynthetic process","type":"exact"},{"name":"decreased triacylglycerol biosynthesis","type":"exact"},{"name":"decreased triacylglycerol biosynthetic process","type":"exact"},{"name":"decreased triglyceride biosynthesis","type":"exact"},{"name":"decreased triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"decreased triglyceride biosynthetic process during vegetative growth","type":"exact"},{"name":"reduced triglyceride biosynthetic process","type":"exact"}],"termid":"FYPO:0003954"}


id: GO:0140814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine betaine(out) + Na+(out) + Cl-(out)= glycine betaine(in) + Na+(in) + Cl-(in).","definition_xrefs":["PMID:10358010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine transmembrane transporter activity","termid":"GO:0015199"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycine betaine:sodium:chloride symporter activity","secondary_identifiers":["RHEA:71175"],"synonyms":[{"name":"sodium/chloride-dependent glycine betaine transporter activity","type":"broad"}],"termid":"GO:0140814"}


id: MONDO:0014814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any advanced sleep phase syndrome in which the cause of the disease is a mutation in the PER3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"advanced sleep phase syndrome","termid":"MONDO:0015609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced sleep phase syndrome 3","secondary_identifiers":["OMIM:616882","GARD:16165","MEDGEN:909447","UMLS:C4225169","DOID:0110013"],"synonyms":[{"name":"FASPS3","type":"exact"},{"name":"PER3 advanced sleep phase syndrome","type":"exact"},{"name":"advanced sleep phase syndrome caused by mutation in PER3","type":"exact"},{"name":"advanced sleep phase syndrome type 3","type":"exact"},{"name":"advanced sleep phase syndrome, familial, 3","type":"exact"},{"name":"advanced sleep phase syndrome, familial, type 3","type":"exact"},{"name":"familial advanced sleep phase syndrome 3","type":"exact"}],"termid":"MONDO:0014814","xrefs":{"Monarch":{"xref_id":"0014814"}}}


id: PBO:0052504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 17","termid":"PBO:0052504"}


id: GO:0022835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when a specific neurotransmitter has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0038023","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"transmitter-gated channel activity","synonyms":[{"name":"extracellular substance gated channel activity","type":"exact"},{"name":"neurotransmitter-gated channel activity","type":"exact"}],"termid":"GO:0022835"}


id: PBO:0110161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine biosynthesis protein Tyw3","termid":"PBO:0110161"}


id: MONDO:0019933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromegaly is an acquired disorder related to excessive production of growth hormone (GH) and characterized by progressive somatic disfigurement (mainly involving the face and extremities) and systemic manifestations.","definition_xrefs":["Orphanet:963"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"growth hormone secreting pituitary adenoma 1","termid":"MONDO:0007052"},{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaly","secondary_identifiers":["NORD:723","SCTID:74107003","MESH:D000172","NANDO:2200315","DOID:2449","UMLS:C0001206","GARD:5725","EFO:1001485","MedDRA:10000599","NCIT:C84533","MEDGEN:1304","NANDO:2100112"],"synonyms":[{"name":"Growth hormone excess","type":"related"},{"name":"pituitary giant","type":"related"},{"name":"somatotroph adenoma","type":"related"}],"termid":"MONDO:0019933","xrefs":{"Monarch":{"xref_id":"0019933"}}}


id: PBO:0025432
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid metabolism disorders","termid":"PBO:0025432"}


id: PBO:0108905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 2","termid":"PBO:0108905"}


id: PBO:0083970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucokinase; catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucose metabolism; one of three glucose phosphorylating enzymes; expression regulated by non-fermentable carbon sources; GLK1 has a paralog, EMI2, that arose from the whole genome duplication","termid":"PBO:0083970"}


id: PBO:0087955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane histidine phosphotransfer kinase and osmosensor; regulates MAP kinase cascade; transmembrane protein with an intracellular kinase domain that signals to Ypd1p and Ssk1p, thereby forming a phosphorelay system similar to bacterial two-component regulators","termid":"PBO:0087955"}


id: GO:0141133
data:
  {"annotated_genes":["SJAG_02467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59091],"is_not":false,"summary":null,"term":"GO:0141133"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + 4 S-adenosyl-L-methionine = diphthine methyl ester-[translation elongation factor 2] + 3 H+ + 4 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:24739148","RHEA:42652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0008276"],"is_obsolete":false,"name":"diphthine methyl ester synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-15775","Reactome:R-HSA-5358484","EC:2.1.1.314"],"termid":"GO:0141133","terms_by_termid":{"GO:0141133":null}}


id: GO:0014861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by depolarization of muscle membrane and ionic fluxes.","definition_xrefs":["GOC:mtg_muscle","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"regulation of skeletal muscle contraction by action potential","termid":"GO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction via regulation of action potential","synonyms":[{"name":"regulation of skeletal muscle contraction via membrane action potential","type":"related"}],"termid":"GO:0014861"}


id: GO:0008116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin I(2).","definition_xrefs":["EC:5.3.99.4","RHEA:23580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"prostaglandin-I synthase activity","secondary_identifiers":["KEGG_REACTION:R02267","MetaCyc:PROSTAGLANDIN-I-SYNTHASE-RXN","Reactome:R-HSA-76496"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate 6-isomerase activity","type":"related"},{"name":"PGI(2) synthase activity","type":"related"},{"name":"PGI(2) synthetase activity","type":"related"},{"name":"PGI2 synthase activity","type":"related"},{"name":"PGI2 synthetase activity","type":"related"},{"name":"cytochrome P450 CYP8A1","type":"narrow"},{"name":"prostacyclin synthase activity","type":"related"},{"name":"prostacycline synthetase activity","type":"related"},{"name":"prostagladin I2 synthetase activity","type":"related"}],"termid":"GO:0008116"}


id: MONDO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A labyrinthitis which is a bacterial infectious disease of the inner ear, often causing deafness and loss of vestibular function. This is caused when bacteria spread to the inner ear during the course of severe acute otitis media, purulent meningitis, or an enlarging cholesteatoma.","definition_xrefs":["DOID:13534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purulent labyrinthitis","secondary_identifiers":["SCTID:24817009","icd11.foundation:479586656","ICD9:386.33","MEDGEN:509995","UMLS:C0155506"],"synonyms":[{"name":"acute suppurative labyrinthitis","type":"related"},{"name":"bacterial labyrinthitis","type":"exact"},{"name":"suppurative labyrinthitis","type":"exact"}],"termid":"MONDO:0001739","xrefs":{"Monarch":{"xref_id":"0001739"}}}


id: GO:0033013
data:
  {"annotated_genes":["SJAG_03961","SJAG_02896","SJAG_00366","SJAG_03862","SJAG_03173","SJAG_01155","SJAG_05283","SJAG_01786","SJAG_01372","SJAG_01192","SJAG_04109","SJAG_00699","SJAG_01841","SJAG_00097","SJAG_04944","SJAG_04397","SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60132],"is_not":false,"summary":null,"term":"GO:0033013"},{"annotations":[78000,79687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[73960,113677,104989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[106398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[57025,67115,62796,62904,64512,79682,59907,58935],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006782"},{"annotations":[71109,76522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[74730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrapyrrole metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"tetrapyrrole metabolism","type":"exact"}],"termid":"GO:0033013","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0033013":null,"GO:0042167":null}}


id: MONDO:0019887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 16q is a rare chromosomal anomaly syndrome, resulting from the partial trisomy of the long arm of chromosome 16, with variable phenotype principally characterized by developmental delay, severe intellectual disability, hypotonia, facial dysmorphism (incl. high, prominent forehead, epicanthic folds, dysplastic ears, broad/depressed nasal bridge, malar hypoplasia, narrow and arched palate, thin upper lip vermilion, micrognathia) and hand/feet anomalies (e.g. arachnodactyly, talipes equinovarus). Cardiac defects, genitourinary malformations and vertebral anomalies are also associated. Thrombocytopenia and recurrent infections have also been reported.","definition_xrefs":["Orphanet:96106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of the long arm of chromosome 16","termid":"MONDO:0016966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 16q","secondary_identifiers":["UMLS:C4706934","SCTID:764459008","MEDGEN:1633675","GARD:19320"],"synonyms":[{"name":"distal duplication 16q","type":"exact"},{"name":"distal trisomy type 16q","type":"exact"},{"name":"telomeric duplication 16q","type":"exact"},{"name":"trisomy 16qter","type":"exact"}],"termid":"MONDO:0019887","xrefs":{"Monarch":{"xref_id":"0019887"}}}


id: PBO:0056774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 24","termid":"PBO:0056774"}


id: PBO:0051858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 4","termid":"PBO:0051858"}


id: RO:HOM0000002
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Similarity that results from independent evolution.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_similarity_relationship_with","termid":"RO:HOM0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homoplasy_relationship_with","synonyms":[{"name":"analogy","type":"related"},{"name":"homoplasous to","type":"exact"}],"termid":"RO:HOM0000002"}


id: PBO:0079035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 4-1","termid":"PBO:0079035"}


id: PBO:0069537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 807, pseudogene","termid":"PBO:0069537"}


id: GO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex formed by a recombinase, a regulatory protein, and the DNA sequences bound by each protein; catalyzes a reversible site-specific recombination reaction that results in the alternate expression of one or more genes in various contexts.","definition_xrefs":["PMID:11114897","PMID:9732277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"invertasome","termid":"GO:0031421"}


id: MONDO:0060662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diamond-Blackfan anemia-like","secondary_identifiers":["MEDGEN:1633207","UMLS:C4693556","OMIM:617911"],"synonyms":[{"name":"DBAL","type":"related"},{"name":"Diamond-Blackfan anemia-like","type":"exact"}],"termid":"MONDO:0060662","xrefs":{"Monarch":{"xref_id":"0060662"}}}


id: PBO:0067243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 316, pseudogene","termid":"PBO:0067243"}


id: MONDO:0016811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal tubulopathy - encephalopathy - liver failure describes a spectrum of phenotypes with manifestations similar but milder than those seen in Gracile syndrome and that can be associated with encephalopathy and psychiatric disorders.","definition_xrefs":["Orphanet:254902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency nuclear type 1","termid":"MONDO:0007415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"renal tubulopathy-encephalopathy-liver failure syndrome","secondary_identifiers":["UMLS:C4274075","GARD:17231","MEDGEN:900319"],"termid":"MONDO:0016811","xrefs":{"Monarch":{"xref_id":"0016811"}}}


id: MONDO:1010813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, horse","secondary_identifiers":["OMIA:000810-9796"],"termid":"MONDO:1010813","xrefs":{"Monarch":{"xref_id":"1010813"}}}


id: PBO:0051328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-19 (pseudogene)","termid":"PBO:0051328"}


id: PATO:0001693
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity which relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"viscous","termid":"PATO:0000998"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased viscosity","synonyms":[{"name":"high viscosity","type":"exact"}],"termid":"PATO:0001693"}


id: GO:1905848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["PMID:23721876","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidopamine","synonyms":[{"name":"activation of cellular response to oxidopamine","type":"narrow"},{"name":"up regulation of cellular response to oxidopamine","type":"exact"},{"name":"up-regulation of cellular response to oxidopamine","type":"exact"},{"name":"upregulation of cellular response to oxidopamine","type":"exact"}],"termid":"GO:1905848"}


id: GO:0010999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a result of heme levels.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of eIF2 alpha phosphorylation by heme","secondary_identifiers":["Reactome:R-HSA-9648895"],"termid":"GO:0010999"}


id: GO:1902959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000059","GOC:sjp","PMID:24577224","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902959)","synonyms":[{"name":"regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902959"}


id: MONDO:1011637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile idiopathic epilepsy, non-human animal","secondary_identifiers":["OMIA:001757"],"termid":"MONDO:1011637","xrefs":{"Monarch":{"xref_id":"1011637"}}}


id: PBO:0049360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 19","termid":"PBO:0049360"}


id: MONDO:1012180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, Eurasian elk","secondary_identifiers":["OMIA:000690-9852"],"termid":"MONDO:1012180","xrefs":{"Monarch":{"xref_id":"1012180"}}}


id: GO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a lens fiber cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a lens fiber cell fate. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell development","synonyms":[{"name":"lens fibre cell development","type":"exact"}],"termid":"GO:0070307"}


id: FYPO:0003186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle","synonyms":[{"name":"abolished protein localization to spindle during mitotic cell cycle","type":"related"},{"name":"protein absent from mitotic spindle","type":"related"},{"name":"protein localisation to mitotic spindle abolished","type":"exact"},{"name":"protein localization to mitotic spindle abolished","type":"exact"},{"name":"protein localization to spindle abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003186"}


id: MONDO:0000556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive cerebellar ataxia (obsolete MONDO:0000556)","termid":"MONDO:0000556","xrefs":{"Monarch":{"xref_id":"0000556"}}}


id: PR:Q10103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromo domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.02c","synonyms":[{"name":"Spom972h-chp1","type":"exact"}],"termid":"PR:Q10103"}


id: PBO:0060597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit D2 pseudogene 1","termid":"PBO:0060597"}


id: PBO:0053945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1248","termid":"PBO:0053945"}


id: PBO:0058479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5586","termid":"PBO:0058479"}


id: GO:0035417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the rate or extent of mitotic prometaphase, the stage following prophase in mitosis (in higher eukaryotes) during which the nuclear envelope is disrupted and breaks into membrane vesicles, and the spindle microtubules enter the nuclear region.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitotic prometaphase (obsolete GO:0035417)","synonyms":[{"name":"negative regulation of mitotic prometaphase","type":"exact"}],"termid":"GO:0035417"}


id: MONDO:0012420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder caused by mutations in the MARVELD2 gene, encoding MARVEL domain-containing protein 2. The condition is characterized by profound prelingual deafness.","definition_xrefs":["NCIT:C129024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 49","secondary_identifiers":["MEDGEN:346670","OMIM:610153","MESH:C565717","UMLS:C1857811","GARD:22619","DOID:0110506"],"synonyms":[{"name":"DFNB49","type":"narrow"},{"name":"MARVELD2 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 49","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 49","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MARVELD2","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 49","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 49","type":"exact"},{"name":"deafness, autosomal recessive 49","type":"narrow"},{"name":"deafness, autosomal recessive type 49","type":"narrow"}],"termid":"MONDO:0012420","xrefs":{"Monarch":{"xref_id":"0012420"}}}


id: MOD:00204
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to D-leucine.","definition_xrefs":["PubMed:1548227","PubMed:10461743","PubMed:1358533","PubMed:12135762","RESID:AA0197","ChEBI:30005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-leucine","synonyms":[{"name":"(2R)-2-amino-4-methylpentanoic acid","type":"exact"},{"name":"D-Leu","type":"exact"},{"name":"D-leucine","type":"exact"},{"name":"MOD_RES D-leucine","type":"exact"},{"name":"alpha-aminoisocaproic acid","type":"exact"}],"termid":"MOD:00204"}


id: GO:0071131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to laminin alpha-4.","definition_xrefs":["PMID:16824487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-laminin alpha-4 complex","synonyms":[{"name":"ITGAV-ITGB3-LAMA4 complex","type":"narrow"}],"termid":"GO:0071131"}


id: PBO:0060491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nanos C2HC-type zinc finger 2","termid":"PBO:0060491"}


id: GO:0036203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10beta-hydroxytaxa-4(20),11-dien-5alpha-yl acetate + O2 + NADPH + H+ = 10beta,14beta-dihydroxytaxa-4(20),11-dien-5alpha-yl acetate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"taxoid 14-beta-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R09867","RHEA:31971"],"termid":"GO:0036203"}


id: GO:0090137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an epithelial cell to another epithelial cell via adhesion molecules that contributes to epithelium migration.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"},{"relation_name":"part_of","term_name":"epithelium migration","termid":"GO:0090132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}


id: PBO:0088384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial N(5)-glutamine methyltransferase","termid":"PBO:0088384"}


id: GO:0140102
data:
  {"annotated_genes":["SJAG_02417","SJAG_03332","SJAG_03713","SJAG_02281","SJAG_03289","SJAG_03877","SJAG_03016","SJAG_00722","SJAG_03008","SJAG_00943","SJAG_03773","SJAG_02024","SJAG_01958","SJAG_02821","SJAG_02350","SJAG_03755"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[57140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106388"},{"annotations":[94950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[76878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016433"},{"annotations":[98189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106142"},{"annotations":[59354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"},{"annotations":[78715,95379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[94661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070043"},{"annotations":[89376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[75452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070037"},{"annotations":[75635,78375,75362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[79252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"},{"annotations":[110001,73039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008649"}]},"cv_name":"molecular_function","definition":"Catalytic activity that acts to modify a ribosomal RNA.","definition_xrefs":["GOC:pdt","GOC:molecular_function_refactoring"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00943":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02350":null,"SJAG_02417":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03713":null,"SJAG_03755":null,"SJAG_03773":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"catalytic activity, acting on a rRNA","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0140102","terms_by_termid":{"GO:0000179":null,"GO:0008649":null,"GO:0008650":null,"GO:0009383":null,"GO:0016433":null,"GO:0052907":null,"GO:0052909":null,"GO:0070037":null,"GO:0070039":null,"GO:0070042":null,"GO:0070043":null,"GO:0106142":null,"GO:0106388":null}}


id: PBO:0018245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med12","termid":"PBO:0018245"}


id: GO:0020014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell division by multiple fission in which nuclei and other organelles in the parent cell divide repeatedly and move to the cell periphery before internal membranes develop around them, producing a large number of daughter cells simultaneously.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"schizogony","secondary_identifiers":["Wikipedia:Protozoal_merogony"],"termid":"GO:0020014"}


id: MONDO:0004991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary adenocarcinoma arising from the lung measuring 3 cm or less. It is characterized by a predominantly lepidic pattern and 5 mm or less invasion in greatest dimension. It is usually a non-mucinous adenocarcinoma, but rarely may be mucinous.","definition_xrefs":["NCIT:C2923","NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"minimally invasive lung adenocarcinoma","secondary_identifiers":["SCTID:373627005","DOID:4926","EFO:0000308","MEDGEN:2871","ICDO:8251/3","MESH:D002282","UMLS:C0007120","ICD9:162.9","ICDO:8250/3"],"synonyms":[{"name":"BAC","type":"exact"},{"name":"bac","type":"exact"},{"name":"bronchioalveolar adenocarcinoma of lung","type":"exact"},{"name":"bronchioalveolar adenocarcinoma of the lung","type":"exact"},{"name":"bronchioalveolar lung carcinoma","type":"exact"},{"name":"bronchiolo-alveolar adenocarcinoma","type":"related"},{"name":"bronchiolo-alveolar carcinoma of lung","type":"exact"},{"name":"bronchiolo-alveolar carcinoma of the lung","type":"exact"},{"name":"bronchiolo-alveolar lung carcinoma","type":"exact"},{"name":"bronchioloalveolar adenocarcinoma of lung","type":"exact"},{"name":"bronchioloalveolar adenocarcinoma of the lung","type":"exact"},{"name":"bronchioloalveolar carcinoma","type":"exact"},{"name":"bronchioloalveolar lung adenocarcinoma","type":"exact"},{"name":"carcinoma, bronchioloalveolar, malignant","type":"exact"},{"name":"minimally invasive lung adenocarcinoma","type":"exact"}],"termid":"MONDO:0004991","xrefs":{"Monarch":{"xref_id":"0004991"}}}


id: PBO:0073019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short coiled-coil protein","termid":"PBO:0073019"}


id: PBO:0113738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated deubiquitinase 1","termid":"PBO:0113738"}


id: GO:0102716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A28 + 2-oxoglutarate + O2 = (2betaOH)-gibberellin28 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A28,oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102716)","termid":"GO:0102716"}


id: GO:0046293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde biosynthetic process","synonyms":[{"name":"formaldehyde anabolism","type":"exact"},{"name":"formaldehyde biosynthesis","type":"exact"},{"name":"formaldehyde formation","type":"exact"},{"name":"formaldehyde synthesis","type":"exact"},{"name":"methanal biosynthesis","type":"exact"},{"name":"methanal biosynthetic process","type":"exact"}],"termid":"GO:0046293"}


id: PBO:0033832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase Psk1","termid":"PBO:0033832"}


id: MONDO:0013605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brittle cornea syndrome in which the cause of the disease is a mutation in the PRDM5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brittle cornea syndrome","termid":"MONDO:0009242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"brittle cornea syndrome 2","secondary_identifiers":["OMIM:614170","GARD:15764","DOID:0080729","UMLS:C3280011","MEDGEN:481641"],"synonyms":[{"name":"BCS2","type":"related"},{"name":"PRDM5 brittle cornea syndrome","type":"exact"},{"name":"brittle cornea syndrome 2","type":"exact"},{"name":"brittle cornea syndrome caused by mutation in PRDM5","type":"exact"},{"name":"brittle cornea syndrome type 2","type":"exact"}],"termid":"MONDO:0013605","xrefs":{"Monarch":{"xref_id":"0013605"}}}


id: PBO:0085386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane H+-ATPase; isoform of Pma1p, involved in pumping protons out of the cell; regulator of cytoplasmic pH and plasma membrane potential","termid":"PBO:0085386"}


id: FYPO:0003102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in regions containing protein-coding genes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at protein coding gene during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0003102"}


id: MONDO:0800392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the GNAT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"GNAT2-related retinopathy","termid":"MONDO:0800392","xrefs":{"Monarch":{"xref_id":"0800392"}}}


id: MONDO:0015009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"},{"relation_name":"is_a","term_name":"EPHB4-associated vascular malformation spectrum","termid":"MONDO:0700080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 7","secondary_identifiers":["MEDGEN:934596","OMIM:617300","UMLS:C4310629"],"synonyms":[{"name":"HFASD","type":"exact"},{"name":"hydrops fetalis, nonimmune, and/or atrial septal defect, susceptibility to","type":"exact"},{"name":"hydrops fetalis, nonimmune, and/or atrial septal defect, susceptibility to; HFASD","type":"exact"}],"termid":"MONDO:0015009","xrefs":{"Monarch":{"xref_id":"0015009"}}}


id: PBO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two MCB clusters regulate cell-cycle dependent cdc22+ transcription","termid":"PBO:0018254"}


id: MONDO:0014789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"CCDC115-CDG","secondary_identifiers":["MEDGEN:906792","DOID:0070267","GARD:17845","OMIM:616828","UMLS:C4225191","Orphanet:468684"],"synonyms":[{"name":"CDG IIo","type":"related"},{"name":"CDG syndrome type IIo","type":"exact"},{"name":"CDG-IIo","type":"exact"},{"name":"CDG2O","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIo","type":"exact"},{"name":"congenital disorder of glycosylation type 2o","type":"exact"},{"name":"congenital disorder of glycosylation type IIo","type":"exact"},{"name":"congenital disorder of glycosylation, type IIo","type":"exact"}],"termid":"MONDO:0014789","xrefs":{"Monarch":{"xref_id":"0014789"}}}


id: GO:0009833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of cellulose and pectin-containing cell walls that form adjacent to the middle lamella following cell division and during cell expansion. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000281","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"plant-type primary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall anabolism","type":"broad"},{"name":"primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall biosynthetic process","type":"broad"},{"name":"primary cell wall formation","type":"broad"},{"name":"primary cell wall synthesis","type":"broad"}],"termid":"GO:0009833"}


id: PBO:0048380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 4","termid":"PBO:0048380"}


id: PBO:0038693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 4","termid":"PBO:0038693"}


id: PBO:0076746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 1","termid":"PBO:0076746"}


id: PBO:0079933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA biogenesis phosphodiesterase 1","termid":"PBO:0079933"}


id: PBO:0053511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 499","termid":"PBO:0053511"}


id: PBO:0090785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyruvate Mpc2","termid":"PBO:0090785"}


id: PATO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's behavior.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioral quality of a process","synonyms":[{"name":"behavioral quality of occurrent","type":"exact"}],"termid":"PATO:0001530"}


id: PBO:0013798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37","termid":"PBO:0013798"}


id: PBO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulator of NHEJ","termid":"PBO:0044496"}


id: PBO:0062422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 83 pseudogene","termid":"PBO:0062422"}


id: GO:0002661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell tolerance induction","synonyms":[{"name":"regulation of B lymphocyte tolerance induction","type":"exact"},{"name":"regulation of B-cell tolerance induction","type":"exact"},{"name":"regulation of B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002661"}


id: MONDO:0040676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the great vessels.","definition_xrefs":["NCIT:C4575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"great vessel cancer","secondary_identifiers":["UMLS:C3665405","MEDGEN:777096"],"synonyms":[{"name":"cancer of great vessel of heart","type":"exact"},{"name":"great vessel cancer","type":"exact"},{"name":"great vessel of heart cancer","type":"exact"},{"name":"malignant great vessel neoplasm","type":"exact"},{"name":"malignant great vessel of heart neoplasm","type":"exact"},{"name":"malignant great vessel tumor","type":"exact"},{"name":"malignant great vessel tumour","type":"exact"},{"name":"malignant neoplasm of great vessel of heart","type":"exact"}],"termid":"MONDO:0040676","xrefs":{"Monarch":{"xref_id":"0040676"}}}


id: GO:0043451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["Wikipedia:Alkene","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkene catabolic process","synonyms":[{"name":"alkene breakdown","type":"exact"},{"name":"alkene catabolism","type":"exact"},{"name":"alkene degradation","type":"exact"}],"termid":"GO:0043451"}


id: PBO:0053103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 2","termid":"PBO:0053103"}


id: PBO:0046523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum metallopeptidase 1","termid":"PBO:0046523"}


id: GO:0035125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the embryonic anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic medial fin morphogenesis","termid":"GO:0035122"},{"relation_name":"is_a","term_name":"anal fin morphogenesis","termid":"GO:0035144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic anal fin morphogenesis","termid":"GO:0035125"}


id: PBO:0025533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-C ortholog Cnp3","termid":"PBO:0025533"}


id: GO:0048709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system.","definition_xrefs":["GOC:vp","PMID:15139015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte differentiation","termid":"GO:0048709"}


id: PBO:0081368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF205 antisense RNA 1","termid":"PBO:0081368"}


id: MONDO:0001609
data:
  {"annotated_genes":["SJAG_02330","SJAG_01759","SJAG_03089","SJAG_02208","SJAG_02453","SJAG_01732","SJAG_01798","SJAG_03684","SJAG_03889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[85736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[85991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[85850,85851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[86444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[86538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[85461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[86383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A decrease in the number of mature granulocytes (neutrophils, eosinophils, and basophils) in the peripheral blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukopenia","termid":"MONDO:0003785"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_03089":null,"SJAG_03684":null,"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agranulocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:7932","icd11.foundation:1913706366","UMLS:C0001824","ICD9:288.8","MESH:D000380","NCIT:C2863","DOID:12987","ICD10CM:D70","ICD10WHO:D70","SCTID:417672002"],"synonyms":[{"name":"Granulocytopenic disorder","type":"exact"},{"name":"Granulopenia","type":"exact"},{"name":"granulocytopenia","type":"exact"}],"termid":"MONDO:0001609","terms_by_termid":{"MONDO:0010294":null,"MONDO:0011405":null,"MONDO:0011997":null,"MONDO:0012559":null,"MONDO:0014118":null,"MONDO:0032899":null,"MONDO:0957809":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0001609"}}}


id: MONDO:0005966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the spleen","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"spleen cancer","secondary_identifiers":["SCTID:127230005","MEDGEN:102271","EFO:0007491","DOID:672","NCIT:C3383","NCIT:C3539","MESH:D013160","ICD10CM:C26.1","UMLS:C0153470"],"synonyms":[{"name":"cancer of spleen","type":"exact"},{"name":"cancer of the spleen","type":"exact"},{"name":"malignant neoplasm of spleen","type":"exact"},{"name":"malignant neoplasm of the spleen","type":"exact"},{"name":"malignant spleen neoplasm","type":"exact"},{"name":"malignant splenic neoplasm","type":"exact"},{"name":"malignant splenic tumor","type":"exact"},{"name":"malignant splenic tumour","type":"exact"},{"name":"malignant tumor of spleen","type":"exact"},{"name":"malignant tumor of the spleen","type":"exact"},{"name":"malignant tumour of spleen","type":"exact"},{"name":"malignant tumour of the spleen","type":"exact"},{"name":"spleen cancer","type":"exact"},{"name":"spleen neoplasm","type":"broad"},{"name":"splenic cancer","type":"exact"},{"name":"splenic neoplasm","type":"broad"}],"termid":"MONDO:0005966","xrefs":{"Monarch":{"xref_id":"0005966"}}}


id: GO:0120056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Migration of ingested material along the length of the large intestine.","definition_xrefs":["GOC:sl","PMID:28157109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal motility","termid":"GO:0120054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"large intestinal transit","synonyms":[{"name":"colon transit","type":"exact"},{"name":"colonic transit","type":"exact"},{"name":"large bowel transit","type":"exact"},{"name":"large intestine transit","type":"exact"}],"termid":"GO:0120056"}


id: GO:0070369
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains beta-catenin and TCF7L2 (TCF4), binds to the TCF DNA motif within a promoter element, and is involved in the regulation of WNT target gene transcription.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:9065401","PMID:9065402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catenin-TCF7L2 complex","termid":"GO:0071664"},{"relation_name":"is_a","term_name":"beta-catenin-TCF complex","termid":"GO:1990907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"beta-catenin-TCF7L2 complex","synonyms":[{"name":"beta-catenin-TCF4 complex","type":"exact"}],"termid":"GO:0070369"}


id: PBO:0040204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astacin like metalloendopeptidase","termid":"PBO:0040204"}


id: PBO:0073859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member 7 pseudogene 1","termid":"PBO:0073859"}


id: PBO:0063014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2B","termid":"PBO:0063014"}


id: MONDO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Dehydrated hereditary stomatocytosis (obsolete MONDO:0000203)","termid":"MONDO:0000203","xrefs":{"Monarch":{"xref_id":"0000203"}}}


id: PBO:0002714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A, intrinsic regulator (predicted)","termid":"PBO:0002714"}


id: MOD:01163
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an amino acid residue and 5'-phosphoguanosine through either a phosphodiester or a phosphoramide bond.","definition_xrefs":["Unimod:413","DeltaMass:304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylated residue","synonyms":[{"name":"5'phos Guanosyl","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"phospho-guanosine","type":"related"}],"termid":"MOD:01163"}


id: MONDO:0010075
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86493],"is_not":false,"summary":null,"term":"MONDO:0010075"}]},"cv_name":"mondo","definition":"Any spondyloepimetaphyseal dysplasia with joint laxity in which the cause of the disease is a mutation in the B3GALT6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112198","UMLS:C4017377","Orphanet:642099","MEDGEN:865814","OMIM:271640"],"synonyms":[{"name":"B3GALT6 spondyloepimetaphyseal dysplasia with joint laxity","type":"exact"},{"name":"SEMDJL","type":"broad"},{"name":"SEMDJL1","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity, type 1, with or without fractures","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity caused by mutation in B3GALT6","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, Beighton type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures","type":"exact"}],"termid":"MONDO:0010075","terms_by_termid":{"MONDO:0010075":null},"xrefs":{"Monarch":{"xref_id":"0010075"}}}


id: GO:1901416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to ethanol","termid":"GO:1901416"}


id: GO:1990549
data:
  {"annotated_genes":["SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92661],"is_not":false,"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The process in which NAD is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:16291748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD transmembrane transport","termid":"GO:0035352"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrial NAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990549","terms_by_termid":{"GO:1990549":null}}


id: MONDO:0017895
data:
  {"annotated_genes":["SJAG_03453","SJAG_04067","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85611,87053,87054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A papillary or follicular thyroid gland carcinoma with a genetic component that develops within the same family. Current studies suggest that it is inherited in an autosomal dominant pattern. It is often multifocal and bilateral and usually affects younger patients.","definition_xrefs":["NCIT:C118829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated thyroid carcinoma","termid":"MONDO:0015447"},{"relation_name":"is_a","term_name":"familial nonmedullary thyroid carcinoma","termid":"MONDO:0017896"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial papillary or follicular thyroid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8488","UMLS:C5191836","MEDGEN:1681657","Orphanet:319487"],"synonyms":[{"name":"FNMTC","type":"exact"},{"name":"familial nonmedullary thyroid gland carcinoma","type":"exact"},{"name":"familial pure nonmedullary thyroid carcinoma","type":"exact"}],"termid":"MONDO:0017895","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0017895"}}}


id: PBO:0083647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongin A; F-box protein that forms a heterodimer with Elc1p and is required for ubiquitin-dependent degradation of the RNA Polymerase II subunit Rpo21p; subunit of the Elongin-Cullin-Socs (ECS) ligase complex","termid":"PBO:0083647"}


id: PBO:0051070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-12","termid":"PBO:0051070"}


id: MONDO:0060556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"joint laxity, short stature, and myopia","secondary_identifiers":["GARD:17963","Orphanet:527450","UMLS:C4540020","MEDGEN:1621331","OMIM:617662"],"synonyms":[{"name":"JLSM","type":"related"},{"name":"joint laxity, short stature, and myopia","type":"exact"}],"termid":"MONDO:0060556","xrefs":{"Monarch":{"xref_id":"0060556"}}}


id: PBO:0031434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_1-NA-PP1","termid":"PBO:0031434"}


id: PATO:0000886
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000886 absolute litter size value (obsolete PATO:0000886)","termid":"PATO:0000886"}


id: MONDO:0044996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the cerebral cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral cortex disorder","secondary_identifiers":["MEDGEN:688117","SCTID:128128003","UMLS:C1263847"],"synonyms":[{"name":"cerebral cortex disease","type":"exact"},{"name":"cerebral cortex disease or disorder","type":"exact"},{"name":"disease of cerebral cortex","type":"exact"},{"name":"disease or disorder of cerebral cortex","type":"exact"},{"name":"disorder of cerebral cortex","type":"exact"}],"termid":"MONDO:0044996","xrefs":{"Monarch":{"xref_id":"0044996"}}}


id: GO:0046859
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a hydrogenosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"hydrogenosome","termid":"GO:0042566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"hydrogenosomal membrane","synonyms":[{"name":"hydrogenosome membrane","type":"exact"}],"termid":"GO:0046859"}


id: GO:0033406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"UCC codon-amino acid adaptor activity","synonyms":[{"name":"TCC codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033406"}


id: PBO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRP-like ion channel Pkd2","termid":"PBO:0002418"}


id: MONDO:0009557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal recessive inherited disorder caused by mutations in the LMNA gene. It is characterized by growth retardation, craniofacial abnormalities with mandibular hypoplasia, skeletal abnormalities with progressive osteolysis of the distal phalanges and clavicles, and mottled or patchy skin pigmentation. The affected individuals have a marked acral loss of adipose tissue with normal or increased adipose tissue in the neck and trunk.","definition_xrefs":["NCIT:C123417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandibuloacral dysplasia","termid":"MONDO:0016584"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"mandibuloacral dysplasia with type A lipodystrophy","secondary_identifiers":["OMIM:248370","UMLS:C5399785","icd11.foundation:1756335062","Orphanet:90153","MEDGEN:1757618","SCTID:109419009","GARD:3374","DOID:0081128","MESH:C535705"],"synonyms":[{"name":"MADA","type":"related"},{"name":"MANDIBULOACRAL dysplasia with type A lipodystrophy","type":"related"},{"name":"Mandibuloacral dysplasia with type a lipodystrophy, atypical","type":"related"},{"name":"craniomandibular Dermatodysostosis","type":"related"},{"name":"lipodystrophy, type A, associated with Mandibuloacral dysplasia","type":"related"},{"name":"mandibuloacral dysplasia","type":"broad"},{"name":"mandibuloacral dysplasia with type A lipodystrophy","type":"exact"}],"termid":"MONDO:0009557","xrefs":{"Monarch":{"xref_id":"0009557"}}}


id: GO:0075292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporangiospore formation","termid":"GO:0075288"},{"relation_name":"is_a","term_name":"regulation of aplanospore formation","termid":"GO:0075290"},{"relation_name":"negatively_regulates","term_name":"aplanospore formation","termid":"GO:0075289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aplanospore formation","termid":"GO:0075292"}


id: GO:0016429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methyladenine.","definition_xrefs":["EC:2.1.1.36"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (adenine-N1)-methyltransferase activity (obsolete GO:0016429)","synonyms":[{"name":"1-methyladenine transfer RNA methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-1-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-N1-)-methyltransferase activity","type":"related"},{"name":"adenine-1-methylase activity","type":"related"},{"name":"tRNA (adenine-N1-)-methyltransferase activity","type":"exact"},{"name":"transfer RNA (adenine-1) methyltransferase activity","type":"related"},{"name":"transfer ribonucleate adenine 1-methyltransferase activity","type":"related"}],"termid":"GO:0016429"}


id: PBO:0045012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIP2A intronic transcript 1","termid":"PBO:0045012"}


id: MONDO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic non-acquired premature ovarian failure (obsolete MONDO:0034443)","secondary_identifiers":["Orphanet:485382"],"termid":"MONDO:0034443","xrefs":{"Monarch":{"xref_id":"0034443"}}}


id: PR:Q10368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22E12.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22E12.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.18","synonyms":[{"name":"Spom972h-SPAC22E12.18","type":"exact"}],"termid":"PR:Q10368"}


id: PBO:0046682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1","termid":"PBO:0046682"}


id: MONDO:0800146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any agammaglobulinemia in which the cause of the disease is autosomal recessive deficiency in the BOB1 gene.","definition_xrefs":["PMID:33571536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia, autosomal recessive, due to BOB1 deficiency","termid":"MONDO:0800146","xrefs":{"Monarch":{"xref_id":"0800146"}}}


id: SO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_2prime_O_dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_2_prime_O_dimethyladenosine","secondary_identifiers":["RNAMOD:088"],"synonyms":[{"name":"N6 2 prime O dimethyladenosine","type":"exact"},{"name":"N6,2'-O-dimethyladenosine","type":"exact"},{"name":"m6Am","type":"exact"}],"termid":"SO:0001312"}


id: PBO:0045338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 11","termid":"PBO:0045338"}


id: FYPO:0003427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which one or more transfer RNA (tRNA) molecules contains fewer queuosine residues than normal.","definition_xrefs":["PMID:24911101","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"decreased queuosine level in tRNA","synonyms":[{"name":"reduced queuosine content of tRNA","type":"exact"},{"name":"reduced queuosine level in tRNA","type":"exact"}],"termid":"FYPO:0003427"}


id: PBO:0078552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 42","termid":"PBO:0078552"}


id: PBO:0081589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF516 antisense RNA 1","termid":"PBO:0081589"}


id: PBO:0028461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_septin_ring","termid":"PBO:0028461"}


id: PR:Q9C116
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1786.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1786.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.04","synonyms":[{"name":"Spom972h-SPAC1786.04","type":"exact"}],"termid":"PR:Q9C116"}


id: PBO:0018214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor, glutathione S-transferase (predicted)","termid":"PBO:0018214"}


id: GO:0033466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trans-zeatin, (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zeatin biosynthetic process","termid":"GO:0033398"},{"relation_name":"is_a","term_name":"trans-zeatin metabolic process","termid":"GO:0033400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trans-zeatin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-2681"],"synonyms":[{"name":"trans-zeatin anabolism","type":"exact"},{"name":"trans-zeatin biosynthesis","type":"exact"},{"name":"trans-zeatin formation","type":"exact"},{"name":"trans-zeatin synthesis","type":"exact"}],"termid":"GO:0033466"}


id: PBO:0081308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90 pseudogene 3","termid":"PBO:0081308"}


id: MONDO:0015853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete deficient breast volume or number (obsolete MONDO:0015853)","secondary_identifiers":["Orphanet:180173"],"termid":"MONDO:0015853","xrefs":{"Monarch":{"xref_id":"0015853"}}}


id: GO:0052049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type III secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type III secretion system (obsolete GO:0052049)","termid":"GO:0052049"}


id: MONDO:0012637
data:
  {"annotated_genes":["SJAG_00041"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86518],"is_not":false,"summary":null,"term":"MONDO:0012637"}]},"cv_name":"mondo","definition":"COG1-CDG is an extremely rare form of CDG syndrome characterized clinically in the few cases reported to date by variable signs including microcephaly, growth retardation, psychomotor retardation and facial dysmorphism.","definition_xrefs":["Orphanet:263508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"COG1-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:718750004","UMLS:C2931011","GARD:10226","DOID:0070259","MESH:C535756","MEDGEN:443957","OMIM:611209"],"synonyms":[{"name":"CDG 2G","type":"related"},{"name":"CDG IIg","type":"related"},{"name":"CDG syndrome type IIg","type":"exact"},{"name":"CDG-IIg","type":"exact"},{"name":"CDG2G","type":"exact"},{"name":"COG1-CDG","type":"exact"},{"name":"COG1-CDG (CDG-IIg)","type":"related"},{"name":"COG1-congenital disorder of glycosylation","type":"exact"},{"name":"Cdgii/Cog1 Cerebrocostomandibular-like syndrome","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type IIg","type":"exact"},{"name":"congenital disorder of glycosylation type 2g","type":"exact"},{"name":"congenital disorder of glycosylation type IIg","type":"exact"},{"name":"congenital disorder of glycosylation, type IIg","type":"related"}],"termid":"MONDO:0012637","terms_by_termid":{"MONDO:0012637":null},"xrefs":{"Monarch":{"xref_id":"0012637"}}}


id: FYPO:0005817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or both ends end of a microtubule does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during mitotic interphase","termid":"FYPO:0005441"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule plus-end","termid":"FYPO:0005814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to microtubule plus-end during mitotic interphase","synonyms":[{"name":"abolished protein localisation to microtubule plus-end during mitotic interphase","type":"exact"},{"name":"abolished protein localization to microtubule plus end during mitotic interphase","type":"exact"},{"name":"abolished protein localization to microtubule plus-end during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule plus-end during interphase of mitotic cell cycle","type":"exact"},{"name":"protein localization to microtubule plus-end abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0005817"}


id: PBO:0034553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CRE_promoter","termid":"PBO:0034553"}


id: GO:0004905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a type I interferon and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","ISBN:0126896631","PMID:16681834","GOC:signaling","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"type I interferon receptor activity","synonyms":[{"name":"interferon-alpha receptor activity","type":"narrow"},{"name":"interferon-alpha/beta receptor activity","type":"narrow"},{"name":"interferon-beta receptor activity","type":"narrow"},{"name":"interferon-delta receptor activity","type":"narrow"},{"name":"interferon-epsilon receptor activity","type":"narrow"},{"name":"interferon-kappa receptor activity","type":"narrow"},{"name":"interferon-omega receptor activity","type":"narrow"},{"name":"interferon-tau receptor activity","type":"narrow"},{"name":"interferon-zeta receptor activity","type":"narrow"},{"name":"type I IFN receptor activity","type":"exact"}],"termid":"GO:0004905"}


id: PBO:0036207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_metaphase_chromosome_recapture","termid":"PBO:0036207"}


id: FYPO:0003039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is decreased during a cellular response to ultraviolet light. RNA molecules are more likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:10954610","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal RNA stability","termid":"FYPO:0003038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA stability during cellular response to UV","synonyms":[{"name":"decreased RNA stability during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased RNA stability during cellular response to UV during vegetative growth","type":"exact"},{"name":"decreased RNA stability during cellular response to ultraviolet light","type":"exact"},{"name":"reduced RNA stability during cellular response to UV","type":"exact"}],"termid":"FYPO:0003039"}


id: GO:0007484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia development","termid":"GO:0048806"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived genitalia development","synonyms":[{"name":"genital development","type":"broad"}],"termid":"GO:0007484"}


id: PBO:0052572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 5A","termid":"PBO:0052572"}


id: PBO:0059059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A pseudogene 2","termid":"PBO:0059059"}


id: FYPO:0001766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA methylation, the posttranscriptional addition of methyl groups to specific residues in a tRNA molecule, is abnormal.","definition_xrefs":["PomBase:mah","GO:0030488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal tRNA methylation","synonyms":[{"name":"abnormal tRNA methylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001766"}


id: PBO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase Tkt1","termid":"PBO:0090424"}


id: PBO:0067993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 295","termid":"PBO:0067993"}


id: PBO:0058048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4269","termid":"PBO:0058048"}


id: GO:1904047
data:
  {"annotated_genes":["SJAG_03755","SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57144,97626],"is_not":false,"summary":null,"term":"GO:1904047"}]},"cv_name":"molecular_function","definition":"Binding to S-adenosyl-L-methionine.","definition_xrefs":["GO_REF:0000067","GOC:BHF","GOC:hal","GOC:TermGenie","PMID:22985361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"S-adenosyl-L-methionine binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070283","Reactome:R-HSA-947535"],"synonyms":[{"name":"radical SAM enzyme activity","type":"narrow"}],"termid":"GO:1904047","terms_by_termid":{"GO:1904047":null}}


