# terms

id: PBO:0048897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 19","termid":"PBO:0048897"}


id: GO:0140053
data:
  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process in which a mitochondrial gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.","definition_xrefs":["PMID:27058308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":161,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00077":null,"SJAG_00086":null,"SJAG_00103":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00255":null,"SJAG_00286":null,"SJAG_00308":null,"SJAG_00315":null,"SJAG_00358":null,"SJAG_00428":null,"SJAG_00462":null,"SJAG_00497":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00634":null,"SJAG_00637":null,"SJAG_00653":null,"SJAG_00782":null,"SJAG_00797":null,"SJAG_00799":null,"SJAG_00833":null,"SJAG_00844":null,"SJAG_00847":null,"SJAG_00860":null,"SJAG_00865":null,"SJAG_00887":null,"SJAG_00889":null,"SJAG_00936":null,"SJAG_00944":null,"SJAG_00997":null,"SJAG_01045":null,"SJAG_01174":null,"SJAG_01249":null,"SJAG_01303":null,"SJAG_01352":null,"SJAG_01368":null,"SJAG_01413":null,"SJAG_01446":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01517":null,"SJAG_01518":null,"SJAG_01520":null,"SJAG_01577":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01704":null,"SJAG_01713":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01797":null,"SJAG_01806":null,"SJAG_01829":null,"SJAG_01882":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02201":null,"SJAG_02217":null,"SJAG_02236":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02324":null,"SJAG_02353":null,"SJAG_02359":null,"SJAG_02428":null,"SJAG_02452":null,"SJAG_02526":null,"SJAG_02548":null,"SJAG_02615":null,"SJAG_02643":null,"SJAG_02721":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02836":null,"SJAG_02856":null,"SJAG_02977":null,"SJAG_02991":null,"SJAG_03014":null,"SJAG_03040":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03071":null,"SJAG_03104":null,"SJAG_03144":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03232":null,"SJAG_03284":null,"SJAG_03289":null,"SJAG_03297":null,"SJAG_03322":null,"SJAG_03402":null,"SJAG_03426":null,"SJAG_03459":null,"SJAG_03461":null,"SJAG_03550":null,"SJAG_03578":null,"SJAG_03584":null,"SJAG_03585":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_03674":null,"SJAG_04019":null,"SJAG_04030":null,"SJAG_04094":null,"SJAG_04113":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04240":null,"SJAG_04244":null,"SJAG_04281":null,"SJAG_04285":null,"SJAG_04351":null,"SJAG_04367":null,"SJAG_04377":null,"SJAG_04378":null,"SJAG_04409":null,"SJAG_04473":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04635":null,"SJAG_04689":null,"SJAG_04700":null,"SJAG_04738":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04840":null,"SJAG_04856":null,"SJAG_04862":null,"SJAG_04885":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04918":null,"SJAG_04929":null,"SJAG_04934":null,"SJAG_04959":null,"SJAG_05008":null,"SJAG_05218":null,"SJAG_05221":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05271":null,"SJAG_05320":null,"SJAG_05560":null,"SJAG_05573":null,"SJAG_05693":null,"SJAG_06038":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_06586":null,"SJAG_07009":null,"SJAG_16456":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial gene expression","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0140053","terms_by_termid":{"GO:0000963":null,"GO:0000964":null,"GO:0000965":null,"GO:0006390":null,"GO:0006391":null,"GO:0032543":null,"GO:0070124":null,"GO:0070125":null,"GO:0070126":null,"GO:0070131":null,"GO:0070134":null,"GO:0070143":null,"GO:0070144":null,"GO:0070146":null,"GO:0070150":null,"GO:0070158":null,"GO:0070183":null,"GO:0070185":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0140040":null,"GO:0140053":null,"GO:1990180":null,"GO:1990799":null}}


id: PBO:0116806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 6","termid":"PBO:0116806"}


id: PBO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T5orf172 family protein","termid":"PBO:0001753"}


id: GO:2000992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of galactomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of galactomannan catabolic process","termid":"GO:2000991"},{"relation_name":"negatively_regulates","term_name":"galactomannan catabolic process","termid":"GO:0051682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of galactomannan catabolic process","termid":"GO:2000992"}


id: GO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid gland development","termid":"GO:0030878"}


id: PBO:0076284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYF2 pre-mRNA splicing factor pseudogene 1","termid":"PBO:0076284"}


id: PBO:0064309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteolipid protein 1","termid":"PBO:0064309"}


id: PBO:0066196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 15","termid":"PBO:0066196"}


id: PBO:0026850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_rRNA_gene","termid":"PBO:0026850"}


id: FYPO:0005948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin regions where RNA polymerase II actively transcribes genes is decreased.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0004161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at polymerase II highly transcribed genes during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005948"}


id: GO:0160093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cordate pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:23020903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate pharynx development","termid":"GO:0160093"}


id: GO:1901923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sclerotium development.","definition_xrefs":["PMID:21148914","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of sclerotium development","termid":"GO:1901922"},{"relation_name":"negatively_regulates","term_name":"sclerotium development","termid":"GO:1990045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sclerotium development","synonyms":[{"name":"down regulation of sclerotium development","type":"exact"},{"name":"down-regulation of sclerotium development","type":"exact"},{"name":"downregulation of sclerotium development","type":"exact"},{"name":"inhibition of sclerotium development","type":"narrow"}],"termid":"GO:1901923"}


id: GO:0075259
data:
  {"annotated_genes":["SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118041],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075319"}]},"cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spore-bearing structure over time, from its formation to the mature structure. A spore-bearing structure is an anatomical structure that produces new spores.","definition_xrefs":["GOC:mcc","GOC:mah","GOC:di","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore-bearing structure development","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fruiting structure development","type":"exact"},{"name":"sporangium development","type":"broad"},{"name":"spore-bearing organ development","type":"related"},{"name":"sporophore development","type":"exact"}],"termid":"GO:0075259","terms_by_termid":{"GO:0075319":null}}


id: PBO:0027041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_heat-shock-inducible_genes_during_cellular_response_to_heat_shock","termid":"PBO:0027041"}


id: MONDO:0001296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of night blindness that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"night blindness","termid":"MONDO:0004588"},{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acquired night blindness","secondary_identifiers":["ICD9:368.62","MEDGEN:508926","DOID:11491","ICD10CM:H53.62","SCTID:53808001","UMLS:C0152202","icd11.foundation:1609326234"],"synonyms":[{"name":"acquired night blindness","type":"exact"}],"termid":"MONDO:0001296","xrefs":{"Monarch":{"xref_id":"0001296"}}}


id: MONDO:0016947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 10","termid":"MONDO:0016931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 10","secondary_identifiers":["icd11.foundation:1720386511","MEDGEN:1826038","Orphanet:262776","UMLS:C5679712","GARD:20867"],"synonyms":[{"name":"partial duplication of chromosome 10p","type":"exact"},{"name":"partial trisomy of chromosome 10p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 10","type":"exact"}],"termid":"MONDO:0016947","xrefs":{"Monarch":{"xref_id":"0016947"}}}


id: PBO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase (predicted)","termid":"PBO:0002628"}


id: PBO:0056644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 5","termid":"PBO:0056644"}


id: PBO:0085714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085714"}


id: PBO:0077578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 3","termid":"PBO:0077578"}


id: MONDO:0958174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nevoid basal cell carcinoma syndrome","termid":"MONDO:0007187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"basal cell nevus syndrome 1","secondary_identifiers":["OMIM:109400"],"termid":"MONDO:0958174","xrefs":{"Monarch":{"xref_id":"0958174"}}}


id: PBO:0080736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWP1 antisense RNA 1","termid":"PBO:0080736"}


id: PBO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP18 small subunit processome component","termid":"PBO:0080105"}


id: PBO:0042852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP61 antisense RNA 1","termid":"PBO:0042852"}


id: MONDO:0004414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of endometrial abnormalities that occur in women who use tamoxifen to treat or prevent the development of breast cancer. These abnormalities include endometrial polyps, endometrial hyperplasia, and endometrial carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tamoxifen-related endometrial lesion","secondary_identifiers":["MEDGEN:271571","NCIT:C40159","UMLS:C1515212","DOID:7962"],"synonyms":[{"name":"tamoxifen-related endometrial disorder","type":"exact"}],"termid":"MONDO:0004414","xrefs":{"Monarch":{"xref_id":"0004414"}}}


id: GO:1903857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","PMID:25535363","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytokinin dehydrogenase activity (obsolete GO:1903857)","synonyms":[{"name":"down regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down regulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"down regulation of cytokinin oxidase activity","type":"related"},{"name":"down-regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down-regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down-regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down-regulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"down-regulation of cytokinin oxidase activity","type":"related"},{"name":"downregulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"downregulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"downregulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"downregulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"downregulation of cytokinin oxidase activity","type":"related"},{"name":"inhibition of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"narrow"},{"name":"inhibition of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"inhibition of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"narrow"},{"name":"inhibition of cytokinin dehydrogenase activity","type":"narrow"},{"name":"inhibition of cytokinin oxidase activity","type":"related"},{"name":"negative regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"negative regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"negative regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"negative regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903857"}


id: PBO:0075811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 antisense RNA 1","termid":"PBO:0075811"}


id: MONDO:0022887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofrontonasal syndrome Teebi type","termid":"MONDO:0022887","xrefs":{"Monarch":{"xref_id":"0022887"}}}


id: GO:1904572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:19716792"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA binding (obsolete GO:1904572)","synonyms":[{"name":"down regulation of mRNA binding","type":"exact"},{"name":"down-regulation of mRNA binding","type":"exact"},{"name":"downregulation of mRNA binding","type":"exact"},{"name":"inhibition of mRNA binding","type":"narrow"}],"termid":"GO:1904572"}


id: MONDO:1011232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, rabbit","secondary_identifiers":["OMIA:000337-9986"],"termid":"MONDO:1011232","xrefs":{"Monarch":{"xref_id":"1011232"}}}


id: MONDO:1011047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome, non-human animal","termid":"MONDO:1010261"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, dog","secondary_identifiers":["OMIA:000712-9615"],"termid":"MONDO:1011047","xrefs":{"Monarch":{"xref_id":"1011047"}}}


id: GO:0016068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors on mast cells or basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"},{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I hypersensitivity","secondary_identifiers":["Wikipedia:Type_I_hypersensitivity"],"synonyms":[{"name":"immediate hypersensitivity response","type":"exact"}],"termid":"GO:0016068"}


id: GO:0060285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to the motion of one or more eukaryotic cilia. A eukaryotic cilium is a specialized organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:krc","GOC:dgh","GOC:dph","GOC:mlg","GOC:cilia","GOC:mtg_cambridge_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium or flagellum-dependent cell motility","termid":"GO:0001539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium-dependent cell motility","secondary_identifiers":["GO:0071974"],"synonyms":[{"name":"ciliary cell motility","type":"related"},{"name":"cilium cell motility","type":"exact"},{"name":"microtubule-based flagellar cell motility","type":"exact"}],"termid":"GO:0060285"}


id: GO:0031735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR10 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CCR10 chemokine receptor binding","synonyms":[{"name":"CCR10 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031735"}


id: MONDO:1012399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anal sac gland carcinoma, non-human animal","termid":"MONDO:1011817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sac gland carcinoma, dog","secondary_identifiers":["OMIA:001500-9615"],"termid":"MONDO:1012399","xrefs":{"Monarch":{"xref_id":"1012399"}}}


id: FYPO:0006686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA double-strand break resection is decreased. DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["PMID:21931565","GO:0000729","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA double-strand break processing","synonyms":[{"name":"decreased DNA double-strand break resection","type":"exact"},{"name":"decreased DNA double-strand break resectioning","type":"exact"},{"name":"decreased DSB processing","type":"exact"},{"name":"reduced DNA double-strand break processing","type":"exact"}],"termid":"FYPO:0006686"}


id: GO:0010497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells via plasmodesmata. Plasmodesmata is a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["PMID:17601829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"plasmodesmata-mediated intercellular transport","secondary_identifiers":["GO:1902587"],"synonyms":[{"name":"plasmodesma-mediated cell-to-cell transport","type":"exact"},{"name":"plasmodesma-mediated intercellular transport","type":"exact"},{"name":"plasmodesmata-mediated cell-to-cell transport","type":"exact"},{"name":"single organism plasmodesmata-mediated intercellular transport","type":"related"},{"name":"single-organism plasmodesmata-mediated intercellular transport","type":"related"}],"termid":"GO:0010497"}


id: PBO:0067960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 262","termid":"PBO:0067960"}


id: PBO:0060422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 1","termid":"PBO:0060422"}


id: GO:0098822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-L-cysteine persulfide.","definition_xrefs":["PMID:11592406"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine modification to L-cysteine persulfide (obsolete GO:0098822)","termid":"GO:0098822"}


id: MONDO:0024346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis amiantacea","secondary_identifiers":["ICD9:696.5","MEDGEN:575384","icd11.foundation:210953452","SCTID:238924007","UMLS:C0343100"],"synonyms":[{"name":"pityriasis amiantacea","type":"exact"},{"name":"tinea amiantacea","type":"related"}],"termid":"MONDO:0024346","xrefs":{"Monarch":{"xref_id":"0024346"}}}


id: MONDO:0859576
data:
  {"annotated_genes":["SJAG_03436"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85369],"is_not":false,"summary":null,"term":"MONDO:0859576"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"},{"relation_name":"is_a","term_name":"Atelis syndrome","termid":"MONDO:0859393"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03436":null},"genotype_count":0,"is_obsolete":false,"name":"Atelis syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774282","MEDGEN:1824055","OMIM:620185"],"termid":"MONDO:0859576","terms_by_termid":{"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0859576"}}}


id: FYPO:0008342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transfer RNAs measured in a cell is lower than normal. Total tRNA or a specific tRNA may be affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased pre-tRNA or mature level during vegetative growth","termid":"FYPO:0008342"}


id: GO:0003070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by a neurotransmitter. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by neurotransmitter","termid":"GO:0003070"}


id: PBO:0027413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027413"}


id: PBO:0042147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 5","termid":"PBO:0042147"}


id: MONDO:0004987
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001187"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm of the bladder. - 2003","definition_xrefs":["NCIT:C2901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"},{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"urinary bladder neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:594","UMLS:C0005695","EFO:0000294","SCTID:126885006","ICD9:239.4"],"synonyms":[{"name":"bladder neoplasm","type":"exact"},{"name":"bladder tumor","type":"exact"},{"name":"bladder tumors","type":"exact"},{"name":"bladder tumour","type":"exact"},{"name":"bladder tumours","type":"exact"},{"name":"neoplasm of bladder","type":"exact"},{"name":"neoplasm of the bladder","type":"exact"},{"name":"neoplasm of the urinary bladder","type":"exact"},{"name":"neoplasm of urinary bladder","type":"exact"},{"name":"tumor of bladder","type":"exact"},{"name":"tumor of the bladder","type":"exact"},{"name":"tumor of the urinary bladder","type":"exact"},{"name":"tumor of urinary bladder","type":"exact"},{"name":"tumour of bladder","type":"exact"},{"name":"tumour of the bladder","type":"exact"},{"name":"tumour of the urinary bladder","type":"exact"},{"name":"tumour of urinary bladder","type":"exact"},{"name":"urinary bladder neoplasm","type":"exact"},{"name":"urinary bladder neoplasm (disease)","type":"exact"},{"name":"urinary bladder neoplasms","type":"exact"},{"name":"urinary bladder tumor","type":"exact"},{"name":"urinary bladder tumors","type":"exact"},{"name":"urinary bladder tumour","type":"exact"},{"name":"urinary bladder tumours","type":"exact"}],"termid":"MONDO:0004987","terms_by_termid":{"MONDO:0001187":null},"xrefs":{"Monarch":{"xref_id":"0004987"}}}


id: GO:0048216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["ISBN:0716731363","GOC:jid","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"},{"relation_name":"negatively_regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of Golgi vesicle fusion to target membrane","synonyms":[{"name":"down regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"down-regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"downregulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"inhibition of Golgi vesicle fusion to target membrane","type":"narrow"}],"termid":"GO:0048216"}


id: MONDO:0005680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A delayed relapse of epidemic typhus, caused by Rickettsia prowazekii.","definition_xrefs":["Wikipedia:Brill%E2%80%93Zinsser_disease"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"typhoid fever","termid":"MONDO:0005619"},{"relation_name":"is_a","term_name":"epidemic louse-borne typhus","termid":"MONDO:0019362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brill-Zinsser disease","secondary_identifiers":["SCTID:47761007","icd11.foundation:1961511435","MEDGEN:2730","GARD:19725","Orphanet:99990","EFO:0007182","ICD9:081.1","UMLS:C0006181","DOID:11254"],"synonyms":[{"name":"Brill Zinsser disease","type":"exact"},{"name":"Brill disease","type":"exact"},{"name":"Brill's disease","type":"exact"},{"name":"latent typhus","type":"related"},{"name":"recrudescent typhus","type":"exact"},{"name":"sporadic typhus","type":"related"}],"termid":"MONDO:0005680","xrefs":{"Monarch":{"xref_id":"0005680"}}}


id: PBO:0040967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 38","termid":"PBO:0040967"}


id: GO:1903905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of T cell polarity.","definition_xrefs":["GO_REF:0000058","PMID:23575248","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of establishment of T cell polarity","termid":"GO:1903903"},{"relation_name":"positively_regulates","term_name":"establishment of T cell polarity","termid":"GO:0001768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"positively_regulates","termid":"GO:0007163"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007163","GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of establishment of T cell polarity","synonyms":[{"name":"activation of T cell polarization","type":"narrow"},{"name":"activation of T lymphocyte polarization","type":"narrow"},{"name":"activation of T-cell polarization","type":"narrow"},{"name":"activation of establishment of T cell polarity","type":"narrow"},{"name":"activation of establishment of T lymphocyte polarity","type":"narrow"},{"name":"activation of establishment of T-cell polarity","type":"narrow"},{"name":"activation of establishment of T-lymphocyte polarity","type":"narrow"},{"name":"positive regulation of T cell polarization","type":"exact"},{"name":"positive regulation of T lymphocyte polarization","type":"exact"},{"name":"positive regulation of T-cell polarization","type":"exact"},{"name":"positive regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"positive regulation of establishment of T-cell polarity","type":"exact"},{"name":"positive regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"up regulation of T cell polarization","type":"exact"},{"name":"up regulation of T lymphocyte polarization","type":"exact"},{"name":"up regulation of T-cell polarization","type":"exact"},{"name":"up regulation of establishment of T cell polarity","type":"exact"},{"name":"up regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"up regulation of establishment of T-cell polarity","type":"exact"},{"name":"up regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"up-regulation of T cell polarization","type":"exact"},{"name":"up-regulation of T lymphocyte polarization","type":"exact"},{"name":"up-regulation of T-cell polarization","type":"exact"},{"name":"up-regulation of establishment of T cell polarity","type":"exact"},{"name":"up-regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"up-regulation of establishment of T-cell polarity","type":"exact"},{"name":"up-regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"upregulation of T cell polarization","type":"exact"},{"name":"upregulation of T lymphocyte polarization","type":"exact"},{"name":"upregulation of T-cell polarization","type":"exact"},{"name":"upregulation of establishment of T cell polarity","type":"exact"},{"name":"upregulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"upregulation of establishment of T-cell polarity","type":"exact"},{"name":"upregulation of establishment of T-lymphocyte polarity","type":"exact"}],"termid":"GO:1903905"}


id: PBO:0057154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 301b","termid":"PBO:0057154"}


id: PATO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flexibility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"flexible","termid":"PATO:0001544"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased flexibility","synonyms":[{"name":"high flexibility","type":"exact"}],"termid":"PATO:0001776"}


id: GO:0032552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleotide, any compound consisting of a deoxyribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"deoxyribonucleotide binding","termid":"GO:0032552"}


id: GO:0030680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease P complex that contains a single RNA molecule that is necessary and usually sufficient for catalysis, and a single protein molecule. Examples of this complex are found in Bacterial species.","definition_xrefs":["GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease P complex","termid":"GO:0030677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dimeric ribonuclease P complex","synonyms":[{"name":"dimeric RNase P complex","type":"exact"}],"termid":"GO:0030680"}


id: PR:O74524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline dehydrogenase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.03c","secondary_identifiers":["UniProtKB:O74524"],"synonyms":[{"name":"Spom972h-PRODH2","type":"exact"},{"name":"proline oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74524"}


id: PBO:0065407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 6 pseudogene 3","termid":"PBO:0065407"}


id: PBO:0079285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 4","termid":"PBO:0079285"}


id: GO:0045686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"negatively_regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell differentiation","synonyms":[{"name":"down regulation of glial cell differentiation","type":"exact"},{"name":"down-regulation of glial cell differentiation","type":"exact"},{"name":"downregulation of glial cell differentiation","type":"exact"},{"name":"inhibition of glial cell differentiation","type":"narrow"},{"name":"negative regulation of glia cell differentiation","type":"exact"},{"name":"negative regulation of neuroglia differentiation","type":"exact"}],"termid":"GO:0045686"}


id: PBO:0087897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; contains a N-terminal regulatory motif (RI) that acts as a cytoplasmic retention determinant and as an Asi dependent degron in the nucleus; undergoes proteolytic processing by SPS (Ssy1p-Ptr3p-Ssy5p)-sensor component Ssy5p in response to extracellular amino acids; activates transcription of amino acid permease genes and may have a role in tRNA processing; STP1 has a paralog, STP2, that arose from the whole genome duplication","termid":"PBO:0087897"}


id: MONDO:1010571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, domestic guinea pig","secondary_identifiers":["OMIA:000279-10141"],"termid":"MONDO:1010571","xrefs":{"Monarch":{"xref_id":"1010571"}}}


id: FYPO:0000499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal mitophagy","termid":"FYPO:0007590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitophagy","synonyms":[{"name":"abolished autophagy of mitochondrion","type":"exact"},{"name":"absent mitophagy","type":"exact"},{"name":"mitophagy abolished","type":"exact"},{"name":"mitophagy: absent","type":"related"}],"termid":"FYPO:0000499"}


id: GO:0070928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, mediated by small non-coding RNAs, that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.","definition_xrefs":["GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA stability, ncRNA-mediated (obsolete GO:0070928)","synonyms":[{"name":"ncRNA-mediated regulation of mRNA stability","type":"exact"},{"name":"regulation of mRNA stability, non-coding RNA-mediated","type":"exact"}],"termid":"GO:0070928"}


id: GO:0002664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell tolerance induction","synonyms":[{"name":"regulation of T lymphocyte tolerance induction","type":"exact"},{"name":"regulation of T-cell tolerance induction","type":"exact"},{"name":"regulation of T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002664"}


id: FYPO:0004252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of DNA replication is normal (i.e. indistinguishable from wild type) when one or more replication forks arrest.","definition_xrefs":["PomBase:mah","PMID:24806966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of DNA replication during replication fork arrest","synonyms":[{"name":"normal regulation of DNA replication during replication fork arrest during mitotic cell cycle","type":"exact"},{"name":"normal regulation of DNA replication during replication fork arrest during vegetative growth","type":"exact"},{"name":"normal regulation of nuclear cell cycle DNA replication during replication fork arrest","type":"exact"}],"termid":"FYPO:0004252"}


id: GO:0047124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,5S)-3,5-diaminohexanoate + H2O + NAD+ = (S)-5-amino-3-oxo-hexanoate + H+ + NADH + NH4.","definition_xrefs":["EC:1.4.1.11","RHEA:19633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-erythro-3,5-diaminohexanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03349","MetaCyc:1.4.1.11-RXN"],"synonyms":[{"name":"L-3,5-diaminohexanoate dehydrogenase activity","type":"related"},{"name":"L-erythro-3,5-diaminohexanoate:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047124"}


id: GO:0018990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding of the old chitin-based cuticlar fragments during the molting cycle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecdysis, chitin-based cuticle","termid":"GO:0018990"}


id: FYPO:0001270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the separation of chromosomes into two distinct unequal masses, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PomBase:mah","PMID:22711988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000337","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation","synonyms":[{"name":"aneuploidy","type":"related"},{"name":"complete but unequal mitotic chromosome segregation","type":"exact"},{"name":"complete but unequal mitotic sister chromatid separation","type":"related"},{"name":"complete but unequal mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"complete but unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001270"}


id: PR:Q8TFH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.12c gene.","definition_xrefs":["UniProtKB:Q8TFH2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier PB17E12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.12c","synonyms":[{"name":"Spom972h-SPAPB17E12.12c","type":"exact"}],"termid":"PR:Q8TFH2"}


id: PBO:0083031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deletion suppressor of mpt5 mutation; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0083031"}


id: FYPO:0005433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination at one or more recombination hotspots is decreased to the background level. The basal rate of recombination (i.e. away from hotspots) may remain normal or may be decreased.","definition_xrefs":["PMID:12019258","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased meiotic recombination at hotspot","synonyms":[{"name":"decreased meiotic recombination at recombination hotspot","type":"exact"},{"name":"hotspot-specific decreased meiotic recombination","type":"exact"},{"name":"reduced meiotic recombination at hotspot","type":"exact"}],"termid":"FYPO:0005433"}


id: PBO:0011427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Slx9 (predicted)","termid":"PBO:0011427"}


id: GO:2000942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amylopectin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amylopectin metabolic process","synonyms":[{"name":"regulation of Amylopectin metabolism","type":"exact"}],"termid":"GO:2000942"}


id: GO:0015955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine deoxyribonucleotide is synthesized from another pyrimidine deoxyribonucleotide.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide interconversion","termid":"GO:0015953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide interconversion","termid":"GO:0015955"}


id: MONDO:1010986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in tiger.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, tiger","secondary_identifiers":["OMIA:000487-9694"],"termid":"MONDO:1010986","xrefs":{"Monarch":{"xref_id":"1010986"}}}


id: GO:0019927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to tryptophyl quinone to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone, a cofactor found at the active site of amine dehydrogenase.","definition_xrefs":["PDB:1JJU","RESID:AA0313","PMID:11555656","PMID:11717396"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone (obsolete GO:0019927)","termid":"GO:0019927"}


id: PBO:0091372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER zinc importer, CDF family, Zhf1","termid":"PBO:0091372"}


id: PBO:0057581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 885","termid":"PBO:0057581"}


id: PBO:0072568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras responsive element binding protein 1","termid":"PBO:0072568"}


id: GO:0061758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + acceptor -> 2-oxoglutarate + reduced acceptor.","definition_xrefs":["GOC:dph","RHEA:21253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutarate dehydrogenase activity","termid":"GO:0047545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyglutarate dehydrogenase activity, forward reaction","synonyms":[{"name":"alpha-ketoglutarate reductase activity, reverse reaction","type":"exact"}],"termid":"GO:0061758"}


id: MOD:00780
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-acetyl-L-asparagine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-asparagine","synonyms":[{"name":"AcAsn","type":"exact"}],"termid":"MOD:00780"}


id: GO:1901353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:12869188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of phosphatidylglycerol biosynthetic process","termid":"GO:1901351"},{"relation_name":"positively_regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"activation of phosphatidylglycerol anabolism","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthesis","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylglycerol formation","type":"narrow"},{"name":"activation of phosphatidylglycerol synthesis","type":"narrow"},{"name":"positive regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"positive regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylglycerol formation","type":"exact"},{"name":"positive regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up-regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylglycerol formation","type":"exact"},{"name":"upregulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901353"}


id: MONDO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histidinemia (obsolete MONDO:0000695)","termid":"MONDO:0000695","xrefs":{"Monarch":{"xref_id":"0000695"}}}


id: PBO:0088806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh3","termid":"PBO:0088806"}


id: MONDO:0004509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive, papillary epithelial neoplasm that arises from the epithelium of the intrahepatic bile ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct papillary neoplasm","termid":"MONDO:0003455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"intrahepatic biliary papillomatosis","secondary_identifiers":["MEDGEN:233574","DOID:8230","UMLS:C1334258","NCIT:C7125"],"synonyms":[{"name":"intrahepatic bile duct papillary neoplasm","type":"exact"},{"name":"intrahepatic bile duct papillomatosis","type":"exact"},{"name":"intrahepatic biliary papillomatosis","type":"exact"}],"termid":"MONDO:0004509","xrefs":{"Monarch":{"xref_id":"0004509"}}}


id: PBO:0080545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 4","termid":"PBO:0080545"}


id: GO:0045202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.","definition_xrefs":["PMID:31998110","PMID:24619342","ISBN:0198506732","GOC:aruk","PMID:29383328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction","termid":"GO:0030054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"synapse","secondary_identifiers":["Wikipedia:Chemical_synapse","NIF_Subcellular:sao914572699"],"synonyms":[{"name":"electrotonic synapse","type":"related"},{"name":"mixed synapse","type":"narrow"},{"name":"synaptic junction","type":"exact"}],"termid":"GO:0045202"}


id: FYPO:0001342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects a response to a stimulus in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"cellular response phenotype during vegetative growth","synonyms":[{"name":"cellular response phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular response phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001342"}


id: GO:0099060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane (obsolete GO:0099060)","termid":"GO:0099060"}


id: PBO:0061434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group I member 3","termid":"PBO:0061434"}


id: PBO:0052765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 57","termid":"PBO:0052765"}


id: PBO:0113361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine kinase; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0113361"}


id: GO:0140074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a cardiac endothelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. Endocardial cells (specialized endothelial cells that line the heart) undergo EndMT, and give rise to mesenchymal cells necessary for proper heart development. EndMT, specifically generates valve progenitor cells that give rise to the mitral and tricuspid valves. EndMT also contributes to endocardial cushion formation, as well as to generation of cardiac fibroblasts and smooth muscle cells, but not cardiac myocytes.","definition_xrefs":["PMID:16162442","PMID:26053665","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac endothelial to mesenchymal transition","synonyms":[{"name":"EndMT","type":"exact"},{"name":"EndoMT","type":"exact"}],"termid":"GO:0140074"}


id: MONDO:0100177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing allergic rhinitis.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allergic rhinitis, susceptibility to","secondary_identifiers":["MEDGEN:865977","UMLS:C4017540","OMIM:607154"],"synonyms":[{"name":"allergic rhinitis, susceptibility to","type":"exact"}],"termid":"MONDO:0100177","xrefs":{"Monarch":{"xref_id":"0100177"}}}


id: GO:1990953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of vesicles and protein complexes carried out by molecular motors, kinesins and dynein, along the microtubule tracks within the manchette and by myosin along actin filaments.","definition_xrefs":["PMID:24440897","PMID:26792866","GOC:krc","PMID:22319670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intramanchette transport","synonyms":[{"name":"IMT","type":"related"}],"termid":"GO:1990953"}


id: GO:0030076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-pigment complex that may be closely or peripherally associated to photosynthetic reaction centers that participate in harvesting and transferring radiant energy to the reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"light-harvesting complex","secondary_identifiers":["Wikipedia:Light-harvesting_complex"],"synonyms":[{"name":"antenna complex","type":"related"}],"termid":"GO:0030076"}


id: MOD:00464
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N'-formyl-L-kynurenine.","definition_xrefs":["PubMed:12124932","PubMed:12686488","PubMed:9252331","DeltaMass:356","OMSSA:45","Unimod:425#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N'-formyl-L-kynurenine","synonyms":[{"name":"Dioxidation","type":"related"},{"name":"Double oxidation of Trp","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"formylkynureninw","type":"exact"},{"name":"tryptophan oxidation to formylkynurenin","type":"related"}],"termid":"MOD:00464"}


id: GO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with neuromedin U, a hypothalamic peptide involved in energy homeostasis and stress responses.","definition_xrefs":["GOC:jl","PMID:12584108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide binding","termid":"GO:0042923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"neuromedin U binding","synonyms":[{"name":"NMU binding","type":"exact"}],"termid":"GO:0042924"}


id: GO:0033740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: hydroxylamine + NH3 = hydrazine + H2O, and hydrazine + acceptor = N2 + reduced acceptor.","definition_xrefs":["EC:1.7.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroxylamine oxidoreductase activity","secondary_identifiers":["MetaCyc:1.7.99.8-RXN","RHEA:23232"],"synonyms":[{"name":"hydroxylamine:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0033740"}


id: PBO:0036358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga9 (predicted)","termid":"PBO:0036358"}


id: PBO:0017406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, uncharacterized","termid":"PBO:0017406"}


id: PR:Q09912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psi1 gene.","definition_xrefs":["UniProtKB:Q09912","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein psi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.07c","synonyms":[{"name":"Spom972h-psi1","type":"exact"},{"name":"protein psi (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09912"}


id: PBO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor B","termid":"PBO:0001446"}


id: PBO:0080714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing, antisense to TP73","termid":"PBO:0080714"}


id: PBO:0038478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 1","termid":"PBO:0038478"}


id: PBO:0071139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 2","termid":"PBO:0071139"}


id: GO:1904424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of GTP binding.","definition_xrefs":["GOC:TermGenie","PMID:19066305","PMID:21454546","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of GTP binding (obsolete GO:1904424)","termid":"GO:1904424"}


id: PBO:0036223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_site_selection_from_asymmetrically_located_sites,_forming_incomplete_septum","termid":"PBO:0036223"}


id: PBO:0080663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 9","termid":"PBO:0080663"}


id: GO:0060937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"}


id: GO:0097564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the anterior and ventral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["PMID:16607022","ISBN:9780124260207","GOC:giardia","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right lateral basal body pair","termid":"GO:0097564"}


id: MONDO:1012277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, ducks","secondary_identifiers":["OMIA:001016-8835"],"termid":"MONDO:1012277","xrefs":{"Monarch":{"xref_id":"1012277"}}}


id: FYPO:0003684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of any macromolecular complex present in a cell differs from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered level of macromolecular complex during vegetative growth","synonyms":[{"name":"abnormal level of macromolecular complex during vegetative growth","type":"exact"},{"name":"altered level of macromolecular complex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003684"}


id: MONDO:0004480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic invasive intraductal papillary-mucinous carcinoma (obsolete MONDO:0004480)","termid":"MONDO:0004480","xrefs":{"Monarch":{"xref_id":"0004480"}}}


id: PBO:0043936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB regulated transcription coactivator 1","termid":"PBO:0043936"}


id: PBO:0085193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ornithine carbamoyltransferase; also known as carbamoylphosphate:L-ornithine carbamoyltransferase; catalyzes the biosynthesis of the arginine precursor citrulline","termid":"PBO:0085193"}


id: FYPO:0008329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in the plasma membrane is too low to detect.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"phosphatidylserine absent from plasma membrane","termid":"FYPO:0008329"}


id: SO:0000895
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by DNA methylation, resulting in repression of transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced_by_DNA_modification","termid":"SO:0000894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_DNA_methylation","synonyms":[{"name":"silenced by DNA methylation","type":"exact"}],"termid":"SO:0000895"}


id: PR:Q9HGK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A homologous-pairing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15938:SF0","PRO:DNx","OMA:SCHPO00387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous-pairing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.15","secondary_identifiers":["UniProtKB:Q9HGK2"],"synonyms":[{"name":"Spom972h-PSMC3IP","type":"exact"},{"name":"meiotic expression up-regulated protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGK2"}


id: MONDO:0007457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diastema, dental medial","secondary_identifiers":["OMIM:125900","MEDGEN:342157","MESH:C565098","UMLS:C1852086"],"synonyms":[{"name":"diastema, dental medial","type":"exact"}],"termid":"MONDO:0007457","xrefs":{"Monarch":{"xref_id":"0007457"}}}


id: GO:0016041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + 2 oxidized ferredoxin = L-glutamine + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+. This is a two-step reaction: (a) L-glutamate + NH3 = L-glutamine + H2O, (b) L-glutamate + 2 oxidized ferredoxin + H2O = NH3 + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+.","definition_xrefs":["EC:1.4.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","termid":"GO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate synthase (ferredoxin) activity","secondary_identifiers":["RHEA:12128","MetaCyc:GLUTAMATE-SYNTHASE-FERREDOXIN-RXN"],"synonyms":[{"name":"L-glutamate:ferredoxin oxidoreductase (transaminating)","type":"related"},{"name":"ferredoxin-dependent glutamate synthase activity","type":"related"},{"name":"ferredoxin-glutamate synthase activity","type":"related"},{"name":"glutamate synthase (ferredoxin-dependent)","type":"related"}],"termid":"GO:0016041"}


id: MONDO:0013204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fuchs' endothelial dystrophy in which the cause of the disease is a mutation in the SLC4A11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, Fuchs endothelial, 4","secondary_identifiers":["MEDGEN:413309","OMIM:613268","GARD:18219","MESH:C567677","UMLS:C2750450"],"synonyms":[{"name":"FECD4","type":"related"},{"name":"Fuchs' endothelial dystrophy caused by mutation in SLC4A11","type":"exact"},{"name":"SLC4A11 Fuchs' endothelial dystrophy","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, 4","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, late-onset","type":"related"},{"name":"corneal dystrophy, Fuchs endothelial, type 4","type":"exact"}],"termid":"MONDO:0013204","xrefs":{"Monarch":{"xref_id":"0013204"}}}


id: FYPO:0004719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes and a single, normally located septum, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:al","PMID:8387358","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with condensed chromosomes","termid":"FYPO:0003738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell","synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes, septated cell during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated vegetative cell","type":"exact"}],"termid":"FYPO:0004719"}


id: GO:0046810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the extracellular matrix of a host cell.","definition_xrefs":["PMID:7996163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"host cell extracellular matrix binding","termid":"GO:0046810"}


id: GO:0050636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-epivellosimine + acetyl-CoA = CoA + vinorine.","definition_xrefs":["EC:2.3.1.160","RHEA:24016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"vinorine synthase activity","secondary_identifiers":["KEGG_REACTION:R05876","MetaCyc:2.3.1.160-RXN"],"synonyms":[{"name":"acyl-CoA:16-epivellosimine O-acetyltransferase (cyclizing)","type":"related"}],"termid":"GO:0050636"}


id: PR:O36020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug126 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 126 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.08","synonyms":[{"name":"Spom972h-mug126","type":"exact"}],"termid":"PR:O36020"}


id: GO:0102052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-proline + ATP(4-) = H+ + indole-3-acetyl-proline + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-proline synthetase activity (obsolete GO:0102052)","termid":"GO:0102052"}


id: PBO:0077623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15B","termid":"PBO:0077623"}


id: GO:0060923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to specific cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate commitment","termid":"GO:0042693"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell fate commitment","synonyms":[{"name":"cardiomyocyte cell fate commitment","type":"exact"},{"name":"heart muscle cell fate commitment","type":"exact"}],"termid":"GO:0060923"}


id: PBO:0062273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 4 pseudogene","termid":"PBO:0062273"}


id: PBO:0027239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_streptothricin","termid":"PBO:0027239"}


id: PBO:0039602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B pseudogene 3","termid":"PBO:0039602"}


id: PBO:0088826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1","termid":"PBO:0088826"}


id: PBO:0054694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2103","termid":"PBO:0054694"}


id: PBO:0002725
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome","termid":"PBO:0002725"}


id: PBO:0018001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase I, ubiquitin ligase F-box adaptor Fbh1","termid":"PBO:0018001"}


id: MOD:00693
data:
  {"annotated_genes":["SJAG_04819","SJAG_01488","SJAG_03009"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80423,80370,80426,80374,80427,80376,80425,80424,80375,80267,80269,80270,80373,80371,80268,80422,80266,80372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00006"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01488":null,"SJAG_03009":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"glycosylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"GlycoRes","type":"exact"}],"termid":"MOD:00693","terms_by_termid":{"MOD:00006":null}}


id: GO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced coenzyme F420 + CoB-S-S-CoM = coenzyme F420 + CoM-SH + CoB-SH.","definition_xrefs":["GOC:mengo_curators","PMID:9914308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"reduced coenzyme F420:heterodisulfide oxidoreductase activity","synonyms":[{"name":"F420-dependent heterodisulfide oxidoreductase activity","type":"exact"},{"name":"F420H2:heterodisulfide oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent heterodisulfide oxidoreductase activity","type":"exact"}],"termid":"GO:0052752"}


id: PBO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3b (p84)","termid":"PBO:0002463"}


id: PBO:0067987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 289","termid":"PBO:0067987"}


id: PBO:0043815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 6","termid":"PBO:0043815"}


id: PBO:0045750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein Barr virus modification site 1","termid":"PBO:0045750"}


id: MONDO:0019983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"multiloculated renal cyst","secondary_identifiers":["SCTID:86463003","UMLS:C0431719","GARD:19376","NANDO:2200171","MEDGEN:609113","Orphanet:97366"],"synonyms":[{"name":"multilocular cyst of the kidney","type":"exact"},{"name":"multilocular renal cyst","type":"exact"}],"termid":"MONDO:0019983","xrefs":{"Monarch":{"xref_id":"0019983"}}}


id: GO:0031315
data:
  {"annotated_genes":["SJAG_00655"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107011],"is_not":false,"summary":null,"term":"GO:0031315"}]},"cv_name":"cellular_component","definition":"The component of a mitochondrial outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"mitochondrial outer membrane","termid":"GO:0005741"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00655":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"extrinsic component of mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to mitochondrial outer membrane","type":"narrow"}],"termid":"GO:0031315","terms_by_termid":{"GO:0031315":null}}


id: PBO:0086555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene","termid":"PBO:0086555"}


id: PBO:0028573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_monoseptate_cell_with_mitotic_cell_cycle_arrest_before_cell_separation","termid":"PBO:0028573"}


id: PBO:0052735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 27","termid":"PBO:0052735"}


id: GO:0106292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + 2 O2 = H+ + NADP+ + 2 superoxide.","definition_xrefs":["RHEA:63180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide-generating NAD(P)H oxidase activity","termid":"GO:0016175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"superoxide-generating NADPH oxidase activity","termid":"GO:0106292"}


id: PBO:0002010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga2 (predicted)","termid":"PBO:0002010"}


id: GO:0003420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"}


id: PBO:0042402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 14A","termid":"PBO:0042402"}


id: PBO:0085857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0085857"}


id: PBO:0005115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn8 (predicted)","termid":"PBO:0005115"}


id: PBO:0038527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 1","termid":"PBO:0038527"}


id: PBO:0059640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 6","termid":"PBO:0059640"}


id: MOD:01173
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-asparaginyl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["PubMed:12626404","RESID:AA0425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:00764"],"is_obsolete":false,"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSIAsn","type":"exact"},{"name":"LIPID GPI-like-anchor amidated asparagine","type":"exact"},{"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:01173"}


id: PBO:0031874
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deletion Bleomycin Sensitive","termid":"PBO:0031874"}


id: MONDO:0010787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kearns-Sayre syndrome (KSS) is a mitochondrial disease characterized by progressive external ophthalmoplegia (PEO), pigmentary retinitis and an onset before the age of 20 years. Common additional features include deafness, cerebellar ataxia and heart block.","definition_xrefs":["Orphanet:480"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia","termid":"MONDO:0005181"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005267","MONDO:0005244","MONDO:0004069","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"Kearns-Sayre syndrome","secondary_identifiers":["NORD:1323","MEDGEN:9618","OMIM:530000","NCIT:C84798","UMLS:C0022541","NANDO:2200529","MedDRA:10048804","icd11.foundation:399100745","NANDO:1201064","SCTID:25792000","GARD:6817","MESH:D007625","DOID:12934"],"synonyms":[{"name":"CPEO with myopathy","type":"related"},{"name":"CPEO with ragged red fibers","type":"related"},{"name":"CPEO with ragged red fibres","type":"related"},{"name":"CPEO with ragged-Red fibers","type":"related"},{"name":"CPEO with ragged-Red fibres","type":"related"},{"name":"KSS","type":"related"},{"name":"Kearns Sayre Syndrome","type":"exact"},{"name":"Kearns-Sayre syndrome","type":"exact"},{"name":"chronic progressive external ophthalmoplegia with myopathy","type":"related"},{"name":"mitochondrial Cytopathy","type":"related"},{"name":"oculocraniosomatic syndrome","type":"related"},{"name":"ophthalmoplegia plus syndrome","type":"related"},{"name":"ophthalmoplegia, pigmentary Degeneration of retina, and cardiomyopathy","type":"related"},{"name":"ophthalmoplegia, progressive external, with ragged red fibers","type":"related"},{"name":"ophthalmoplegia, progressive external, with ragged red fibres","type":"related"},{"name":"ophthalmoplegia, progressive external, with ragged-Red fibers","type":"related"},{"name":"ophthalmoplegia, progressive external, with ragged-Red fibres","type":"related"},{"name":"ophthalmoplegia-plus syndrome","type":"related"}],"termid":"MONDO:0010787","xrefs":{"Monarch":{"xref_id":"0010787"}}}


id: PR:Q9Y7Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp15 gene.","definition_xrefs":["UniProtKB:Q9Y7Z7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L15, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.01c","synonyms":[{"name":"Spom972h-mrp15","type":"exact"}],"termid":"PR:Q9Y7Z7"}


id: GO:0016836
data:
  {"annotated_genes":["SJAG_01630","SJAG_04404","SJAG_02293","SJAG_01372","SJAG_06611","SJAG_03124","SJAG_03243","SJAG_03669","SJAG_02988","SJAG_00305","SJAG_04843","SJAG_00461","SJAG_03213","SJAG_04674","SJAG_02084","SJAG_05007","SJAG_00592","SJAG_02689","SJAG_01574","SJAG_05283","SJAG_00337","SJAG_04098","SJAG_02369","SJAG_03588","SJAG_02106","SJAG_04107","SJAG_02107","SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74233,59485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019171"},{"annotations":[59672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003855"},{"annotations":[59034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003861"},{"annotations":[73331,72846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003994"},{"annotations":[77294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047453"},{"annotations":[77340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004089"},{"annotations":[70853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004160"},{"annotations":[78952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004333"},{"annotations":[74163,60677,58885,72417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019172"},{"annotations":[63942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004409"},{"annotations":[75435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004424"},{"annotations":[78108,80070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046570"},{"annotations":[69413,70016,76592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004634"},{"annotations":[71346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004655"},{"annotations":[77647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004664"},{"annotations":[79397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004730"},{"annotations":[80040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061503"},{"annotations":[72988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004834"},{"annotations":[74728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004852"},{"annotations":[61262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond by elimination of water.","definition_xrefs":["EC:4.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00305":null,"SJAG_00337":null,"SJAG_00461":null,"SJAG_00592":null,"SJAG_01300":null,"SJAG_01372":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_02084":null,"SJAG_02106":null,"SJAG_02107":null,"SJAG_02293":null,"SJAG_02369":null,"SJAG_02689":null,"SJAG_02988":null,"SJAG_03124":null,"SJAG_03213":null,"SJAG_03243":null,"SJAG_03588":null,"SJAG_03669":null,"SJAG_04098":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04843":null,"SJAG_05007":null,"SJAG_05283":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydro-lyase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9014627","Reactome:R-HSA-2161659"],"termid":"GO:0016836","terms_by_termid":{"GO:0003855":null,"GO:0003861":null,"GO:0003994":null,"GO:0004089":null,"GO:0004160":null,"GO:0004333":null,"GO:0004409":null,"GO:0004424":null,"GO:0004634":null,"GO:0004655":null,"GO:0004664":null,"GO:0004730":null,"GO:0004834":null,"GO:0004852":null,"GO:0019171":null,"GO:0019172":null,"GO:0046570":null,"GO:0047453":null,"GO:0061503":null,"GO:0102158":null}}


id: GO:1904791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of shelterin complex assembly.","definition_xrefs":["PMID:24270157","GOC:BHF","GOC:nc","GOC:BHF_telomere","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of shelterin complex assembly","termid":"GO:1904790"},{"relation_name":"negatively_regulates","term_name":"shelterin complex assembly","termid":"GO:0071573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of shelterin complex assembly","synonyms":[{"name":"down regulation of Pot1 complex assembly","type":"exact"},{"name":"down regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"down regulation of shelterin complex formation","type":"exact"},{"name":"down regulation of telosome assembly","type":"exact"},{"name":"down-regulation of Pot1 complex assembly","type":"exact"},{"name":"down-regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"down-regulation of shelterin complex formation","type":"exact"},{"name":"down-regulation of telosome assembly","type":"exact"},{"name":"downregulation of Pot1 complex assembly","type":"exact"},{"name":"downregulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"downregulation of shelterin complex formation","type":"exact"},{"name":"downregulation of telosome assembly","type":"exact"},{"name":"inhibition of Pot1 complex assembly","type":"narrow"},{"name":"inhibition of Pot1-Tpz1 complex assembly","type":"narrow"},{"name":"inhibition of shelterin complex formation","type":"narrow"},{"name":"inhibition of telosome assembly","type":"narrow"},{"name":"negative regulation of Pot1 complex assembly","type":"exact"},{"name":"negative regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"negative regulation of shelterin complex formation","type":"exact"},{"name":"negative regulation of telosome assembly","type":"exact"}],"termid":"GO:1904791"}


id: FYPO:0006515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which telomere length is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology","termid":"FYPO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere length","termid":"FYPO:0006515"}


id: PBO:0088385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase involved in late endosome to Golgi transport","termid":"PBO:0088385"}


id: PBO:0005663
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Thi5","termid":"PBO:0005663"}


id: GO:0000213
data:
  {"annotated_genes":["SJAG_00754","SJAG_01260","SJAG_03328","SJAG_04907"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71023,72711,78735,117493],"is_not":false,"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron.","definition_xrefs":["EC:4.6.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific ribonuclease activity","termid":"GO:0004549"},{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0140101","GO:0003674","GO:0016787","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA-intron endonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.27.9-RXN"],"synonyms":[{"name":"tRNA splicing endonuclease activity","type":"related"},{"name":"tRNA-intron endoribonuclease activity","type":"exact"}],"termid":"GO:0000213","terms_by_termid":{"GO:0000213":null}}


id: PBO:0070167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 81 pseudogene","termid":"PBO:0070167"}


id: MONDO:0007872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multiple congenital anomaly syndrome characterized by hypoplasia, aplasia or atresia of the lacrimal system; anomalies of the ears and hearing loss; hypoplasias, apalsias or atresias of the salivary glands; dental anomalies and digital malformations.","definition_xrefs":["Orphanet:2363"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nose and cavum anomaly (obsolete MONDO:0015503)","termid":"MONDO:0015503"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary otorhinolaryngological malformation (obsolete MONDO:0018562)","termid":"MONDO:0018562"},{"relation_name":"excluded_subClassOf","term_name":"obsolete EEC syndrome and related syndrome (obsolete MONDO:0020197)","termid":"MONDO:0020197"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"LADD syndrome","secondary_identifiers":["MESH:C538132","NORD:1345","OMIMPS:149730","SCTID:23817003","DOID:0081370","ICD9:759.89","UMLS:C0265269","DOID:0050331","MEDGEN:78545","GARD:6848"],"synonyms":[{"name":"LACRIMOAURICULODENTODIGITAL syndrome","type":"exact"},{"name":"LADD","type":"related"},{"name":"LADD syndrome","type":"exact"},{"name":"Lacrimo-auriculo-dento-digital syndrome","type":"exact"},{"name":"Lacrimoauriculodento-digital syndrome","type":"exact"},{"name":"Lacrimoauriculoradiodental syndrome","type":"exact"},{"name":"Levy Hollister syndrome","type":"exact"},{"name":"Levy-Hollister syndrome","type":"exact"},{"name":"lacrimoauriculodentodigital syndrome","type":"exact"},{"name":"lard syndrome","type":"exact"}],"termid":"MONDO:0007872","xrefs":{"Monarch":{"xref_id":"0007872"}}}


id: GO:0070165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"positively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of adiponectin secretion","synonyms":[{"name":"activation of adiponectin secretion","type":"narrow"},{"name":"stimulation of adiponectin secretion","type":"narrow"},{"name":"up regulation of adiponectin secretion","type":"exact"},{"name":"up-regulation of adiponectin secretion","type":"exact"},{"name":"upregulation of adiponectin secretion","type":"exact"}],"termid":"GO:0070165"}


id: GO:0048827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a phyllome over time, from its formation to the mature structure. A phyllome is a collective term for all the different types of leaves appearing on plants.","definition_xrefs":["GOC:tb","PO:0006001","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phyllome development","termid":"GO:0048827"}


id: GO:0045250
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cytosolic complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA; comprises subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). Usually contains fewer subunits than its eukaryotic counterpart; for example, the E. coli complex contains 12 E1 dimers, 8 E2 trimers, and 6 E3 dimers arranged in highly symmetric cubic order.","definition_xrefs":["GOC:mtg_sensu","ISBN:0716720094","ISBN:0471331309"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic pyruvate dehydrogenase complex (obsolete GO:0045250)","synonyms":[{"name":"pyruvate dehydrogenase complex (lipoamide)","type":"related"}],"termid":"GO:0045250"}


id: MONDO:0018641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paroxysmal nocturnal hemoglobinuria (obsolete MONDO:0018641)","secondary_identifiers":["NANDO:1200300","NANDO:2100182","NANDO:2200621","NANDO:1200311"],"termid":"MONDO:0018641","xrefs":{"Monarch":{"xref_id":"0018641"}}}


id: PBO:0036324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor Coa2 (predicted)","termid":"PBO:0036324"}


id: MONDO:0014451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the PAX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 7","secondary_identifiers":["MEDGEN:863362","DOID:0111132","GARD:16045","OMIM:616002","UMLS:C4014925"],"synonyms":[{"name":"FSGS7","type":"exact"},{"name":"PAX2 focal segmental glomerulosclerosis","type":"exact"},{"name":"focal segmental glomerulosclerosis 7","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in PAX2","type":"exact"},{"name":"focal segmental glomerulosclerosis type 7","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 7","type":"related"}],"termid":"MONDO:0014451","xrefs":{"Monarch":{"xref_id":"0014451"}}}


id: GO:0097435
data:
  {"annotated_genes":["SJAG_03086","SJAG_04498","SJAG_02700","SJAG_00723","SJAG_04624","SJAG_03455","SJAG_00521","SJAG_02864","SJAG_02075","SJAG_00677","SJAG_02624","SJAG_03025","SJAG_03380","SJAG_01756","SJAG_01388","SJAG_04003","SJAG_01964","SJAG_01268","SJAG_02245","SJAG_04479","SJAG_00279","SJAG_01894","SJAG_03540","SJAG_03052","SJAG_02040","SJAG_04074","SJAG_03088","SJAG_02761","SJAG_00938","SJAG_00918","SJAG_07018","SJAG_01215","SJAG_01384","SJAG_03011","SJAG_04172","SJAG_03835","SJAG_01943","SJAG_04982","SJAG_02737","SJAG_01732","SJAG_02336","SJAG_04522","SJAG_04841","SJAG_04312","SJAG_01297","SJAG_00856","SJAG_04621","SJAG_01224","SJAG_01613","SJAG_02286","SJAG_02695","SJAG_02566","SJAG_01993","SJAG_00970","SJAG_02228","SJAG_04100","SJAG_02509","SJAG_04703","SJAG_02886","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051764"},{"annotations":[90428,99651,103101,97694,104961,98621,99470,87896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090135"},{"annotations":[76943,93581,75255,74547,71078,75775,76169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051017"},{"annotations":[99435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061572"},{"annotations":[115986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[69628,73190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[71079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051639"},{"annotations":[105366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007015"},{"annotations":[93582,64661,97497,98622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[89114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045010"},{"annotations":[89074,107932,98072,97806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[79665,106962,77900,78637,79491,77599,102528,76250,97695,74515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[76037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[116749],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[106243,100165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030953"},{"annotations":[92083,79807,78904,75373],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[107303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043622"},{"annotations":[99006,67671,116997,102111,87501,99869,71321,102234,96745,118470,111926,107224,79647,70801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031122"},{"annotations":[115988,107934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[104947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110009"},{"annotations":[117959,98406,89367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[78703,70798,71318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[117000,100169,106245,100774,116754,99871],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[100775,118473],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[79249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[77166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"},{"annotations":[74180],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"},{"annotations":[103690,108066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[101639],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[107414],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"},{"annotations":[67576,79053,77019,66691,76482],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a supramolecular fiber, a polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component 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fiber organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0043206"],"synonyms":[{"name":"extracellular fibril organisation","type":"narrow"},{"name":"extracellular fibril organization","type":"narrow"},{"name":"extracellular fibril organization and biogenesis","type":"narrow"},{"name":"fibril organisation","type":"related"},{"name":"fibril 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id: GO:0102332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonyl-CoA + H+ + a long-chain acyl-[acp] + a reduced electron acceptor = 2 carbon dioxide + coenzyme A + a terminal olefin + a holo-[acyl-carrier protein] + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete fatty-acyl-[acp] elongase/decarboxylase activity (obsolete GO:0102332)","termid":"GO:0102332"}


id: PBO:0036425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, domain associated with Mpn1 in some fungi","termid":"PBO:0036425"}


id: PBO:0041740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMSAP1 divergent transcript","termid":"PBO:0041740"}


id: PBO:0016103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat protein, involved in protein localization to plasma membrane (predicted)","termid":"PBO:0016103"}


id: PBO:0031658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth_during_cellular_hyperosmotic_response","termid":"PBO:0031658"}


id: GO:0016761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-glucose + ((1,4)-beta-D-glucosyl)(n) = GDP + ((1,4)-beta-D-glucosyl)(n+1).","definition_xrefs":["EC:2.4.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase activity","termid":"GO:0016759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"cellulose synthase (GDP-forming) activity","secondary_identifiers":["MetaCyc:CELLULOSE-SYNTHASE-GDP-FORMING-RXN","RHEA:17797"],"synonyms":[{"name":"GDP-glucose-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"GDP-glucose-cellulose glucosyltransferase activity","type":"related"},{"name":"GDP-glucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"GDPglucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"cellulose synthase (guanosine diphosphate-forming) activity","type":"related"},{"name":"guanosine diphosphoglucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"guanosine diphosphoglucose-cellulose glucosyltransferase activity","type":"related"}],"termid":"GO:0016761"}


id: PBO:0079717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 4","termid":"PBO:0079717"}


id: PBO:0113038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centromeric histone H3-like protein; associates with promoters, accessible chromatin and RNAPII-bound regions; centromeric association promotes kinetochore assembly and Sgo1p association with CEN chromatin; Ipl1p-dependent phosphorylation destabilizes defective kinetochores promoting biorientation; phosphorylation by Cdc7p maintains Cse4p at kinetochores and promotes chromosome segregation; R37 methylation regulates kinetochore function and chromosome segregation; complements human homolog CENPA","termid":"PBO:0113038"}


id: FYPO:0007015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of tRNA genes is increased.","definition_xrefs":["PomBase:mah","PMID:31294478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at tRNA genes","termid":"FYPO:0004033"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","termid":"FYPO:0007734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of tRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of tRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of transfer RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at tRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007015"}


id: MONDO:0015815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary cutaneous diffuse large B-cell lymphoma, leg type (obsolete MONDO:0015815)","termid":"MONDO:0015815","xrefs":{"Monarch":{"xref_id":"0015815"}}}


id: MONDO:0044699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"SIN3A-related intellectual disability syndrome","secondary_identifiers":["Orphanet:500163","GARD:22043"],"termid":"MONDO:0044699","xrefs":{"Monarch":{"xref_id":"0044699"}}}


id: MONDO:0019713
data:
  {"annotated_genes":["SJAG_01852","SJAG_04092","SJAG_03484","SJAG_01831","SJAG_00796","SJAG_04995","SJAG_02200","SJAG_05019","SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85897,85896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013895"},{"annotations":[85301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007387"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010370"},{"annotations":[85441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012555"},{"annotations":[85900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013864"},{"annotations":[85318,85319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009955"},{"annotations":[86839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01067":null,"SJAG_01831":null,"SJAG_01852":null,"SJAG_02200":null,"SJAG_03484":null,"SJAG_04092":null,"SJAG_04995":null,"SJAG_05019":null},"genotype_count":0,"is_obsolete":false,"name":"non-syndromic limb reduction defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:93457","MEDGEN:1842256","UMLS:C5680277","GARD:19210"],"synonyms":[{"name":"isolated limb reduction defect","type":"related"},{"name":"non-syndromic limb hypoplasia","type":"exact"},{"name":"nonsyndromic limb reduction defect","type":"exact"}],"termid":"MONDO:0019713","terms_by_termid":{"MONDO:0007387":null,"MONDO:0009955":null,"MONDO:0010121":null,"MONDO:0010370":null,"MONDO:0012555":null,"MONDO:0013864":null,"MONDO:0013895":null},"xrefs":{"Monarch":{"xref_id":"0019713"}}}


id: PBO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2","termid":"PBO:0061738"}


id: GO:0038196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by type III interferon binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["GOC:signaling","PMID:32464097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon-mediated signaling pathway","termid":"GO:0140888"},{"relation_name":"part_of","term_name":"cellular response to type III interferon","termid":"GO:0071358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"type III interferon-mediated signaling pathway","synonyms":[{"name":"interferon lambda signaling pathway","type":"narrow"},{"name":"type III interferon signaling pathway","type":"exact"},{"name":"type III interferon-activated signaling pathway","type":"exact"}],"termid":"GO:0038196"}


id: FYPO:0006870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone methylation is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification","termid":"FYPO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone methylation","termid":"FYPO:0006870"}


id: GO:0008810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.","definition_xrefs":["EC:3.2.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"cellulase activity","secondary_identifiers":["MetaCyc:RXN-2043"],"synonyms":[{"name":"1,4-(1,3;1,4)-beta-D-glucan 4-glucanohydrolase activity","type":"related"},{"name":"9.5 cellulase activity","type":"related"},{"name":"alkali cellulase activity","type":"narrow"},{"name":"avicelase activity","type":"related"},{"name":"beta-1,4-endoglucan hydrolase activity","type":"broad"},{"name":"beta-1,4-glucanase activity","type":"broad"},{"name":"carboxymethyl cellulase activity","type":"narrow"},{"name":"celluase A","type":"related"},{"name":"celludextrinase activity","type":"related"},{"name":"cellulase A 3","type":"related"},{"name":"cellulosin AP","type":"related"},{"name":"endo-1,4-beta-D-glucanase activity","type":"broad"},{"name":"endo-1,4-beta-D-glucanohydrolase activity","type":"broad"},{"name":"endo-1,4-beta-glucanase activity","type":"broad"},{"name":"endoglucanase D","type":"related"},{"name":"endoglucanase activity","type":"broad"},{"name":"pancellase SS","type":"related"}],"termid":"GO:0008810"}


id: PBO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_chromosome_fragmentation_upon_segregation","termid":"PBO:0031091"}


id: PBO:0090564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein, serine/threonine repeat","termid":"PBO:0090564"}


id: GO:0106314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ammonium hydroxide + 3 NADP+ + H2O = nitrite + 3 NADPH + 3 H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrite reductase NADPH activity (obsolete GO:0106314)","termid":"GO:0106314"}


id: PBO:0028039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_disassembly","termid":"PBO:0028039"}


id: MONDO:0009716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Richieri Costa-da Silva syndrome","secondary_identifiers":["MESH:C535675","OMIM:255710","Orphanet:3101","UMLS:C2930978","GARD:4709","MEDGEN:419686"],"synonyms":[{"name":"Richieri Costa Da Silva syndrome","type":"related"},{"name":"myotonia with skeletal abnormalities and intellectual disability","type":"related"},{"name":"myotonia with skeletal abnormalities and mental retardation","type":"related"},{"name":"myotonia-intellectual disability-skeletal anomalies syndrome","type":"exact"}],"termid":"MONDO:0009716","xrefs":{"Monarch":{"xref_id":"0009716"}}}


id: MOD:01227
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an L-fluorophenylalanine.","definition_xrefs":["PubMed:8069568","Unimod:127#F","OMSSA:46","DeltaMass:181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated L-phenylalanine","synonyms":[{"name":"Fluoro","type":"related"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"},{"name":"phef","type":"exact"}],"termid":"MOD:01227"}


id: GO:0047591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxypentanoate + acetyl-CoA = 5-hydroxy-pentanoyl-CoA + acetate.","definition_xrefs":["EC:2.8.3.14","RHEA:23496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"5-hydroxypentanoate CoA-transferase activity","secondary_identifiers":["KEGG_REACTION:R04057","MetaCyc:5-HYDROXYPENTANOATE-COA-TRANSFERASE-RXN"],"synonyms":[{"name":"5-hydroxyvalerate CoA-transferase activity","type":"related"},{"name":"5-hydroxyvalerate coenzyme A transferase activity","type":"related"},{"name":"acetyl-CoA:5-hydroxypentanoate CoA-transferase activity","type":"related"}],"termid":"GO:0047591"}


id: PBO:0060351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVIIIA","termid":"PBO:0060351"}


id: PBO:0050335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 37","termid":"PBO:0050335"}


id: PBO:0008725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA arginine","termid":"PBO:0008725"}


id: PBO:0111878
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octicosapeptide repeat","termid":"PBO:0111878"}


id: MONDO:0007558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neurological disorder characterized by visual seizures and occipital epileptiform paroxysms reactive to ocular opening which present in infancy to mid-adolescence. Vomiting, tonic eye deviation and impairment of consciousness are typically associated with the Panayiotopoulos type, while visual hallucinations, ictal blindness and post-ictal headache are commonly observed in the Gastaut type. Electroencephalographic findings in both types are similar and include bilateral, synchronous, high voltage spike-wave complexes in a normal background activity located predominantly in the occipital lobes.","definition_xrefs":["Orphanet:25968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited childhood occipital epilepsy","secondary_identifiers":["OMIM:132090","icd11.foundation:49954675","UMLS:C1851549","MEDGEN:377052","GARD:2170"],"synonyms":[{"name":"BOE","type":"related"},{"name":"benign occipital epilepsy","type":"exact"},{"name":"epilepsy, benign occipital","type":"related"}],"termid":"MONDO:0007558","xrefs":{"Monarch":{"xref_id":"0007558"}}}


id: PATO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located towards the central axis of the organism or an extremity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axial to","termid":"PATO:0002036"}


id: PBO:0012260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome C oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0012260"}


id: SO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig composed of mRNA_reads.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_contig","synonyms":[{"name":"mRNA contig","type":"related"}],"termid":"SO:0001829"}


id: PBO:0066535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 2","termid":"PBO:0066535"}


id: MONDO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus haemophilus.","definition_xrefs":["MESH:D006192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haemophilus infectious disease","secondary_identifiers":["SCTID:41659003","NCIT:C34654","EFO:1001127"],"synonyms":[{"name":"Haemophilus caused disease or disorder","type":"exact"},{"name":"Haemophilus disease or disorder","type":"exact"},{"name":"Haemophilus infection","type":"related"},{"name":"Haemophilus infectious disease","type":"exact"},{"name":"Hemophilus infection","type":"related"},{"name":"Hemophilus infections","type":"related"},{"name":"haemophilus infectious disease","type":"exact"},{"name":"infection, Haemophilus","type":"related"},{"name":"infection, Hemophilus","type":"related"},{"name":"infections, Haemophilus","type":"related"},{"name":"infections, Hemophilus","type":"related"}],"termid":"MONDO:0006926","xrefs":{"Monarch":{"xref_id":"0006926"}}}


id: GO:0006779
data:
  {"annotated_genes":["SJAG_01372","SJAG_05283","SJAG_01192","SJAG_01841","SJAG_00097","SJAG_02896","SJAG_04944","SJAG_04397","SJAG_01155","SJAG_03961","SJAG_03862","SJAG_02876","SJAG_01786","SJAG_04109","SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78000,79687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[73960,104989,113677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[64512,62904,59907,57025,62796,58935,79682,67115],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[71109,76522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[74730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["ISBN:0198506732","Wikipedia:Porphyrin#Natural_formation","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin anabolism","type":"related"},{"name":"porphyrin biosynthesis","type":"related"},{"name":"porphyrin biosynthetic process","type":"related"},{"name":"porphyrin formation","type":"related"},{"name":"porphyrin synthesis","type":"related"}],"termid":"GO:0006779","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: PBO:0087079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L41A; comprises only 25 amino acids; rpl41a rpl41b double null mutant is viable; homologous to mammalian ribosomal protein L41, no bacterial homolog; RPL41A has a paralog, RPL41B, that arose from the whole genome duplication","termid":"PBO:0087079"}


id: PBO:0030747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell","termid":"PBO:0030747"}


id: GO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a cell, leading to the activation or perpetuation of an immune response.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating signaling pathway","termid":"GO:0002757"},{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway","termid":"GO:0002768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"immune response-activating cell surface receptor signaling pathway","synonyms":[{"name":"activation of immune response by cell surface receptor signaling pathway","type":"exact"},{"name":"immune response-activating cell surface receptor signalling pathway","type":"exact"}],"termid":"GO:0002429"}


id: MONDO:0008153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic bone disorder characterized clinically by progressive extraskeletal bone formation presenting in early life with cutaneous ossification, that progressively involves subcutaneous and then subsequently deep connective tissues, including muscle and fascia. POH overlaps with a number of related genetic disorders including Albright hereditary osteodystrophy, pseudohypoparathyroidism (see these terms), and primary osteoma cutis, that share the common features of superficial heterotopic ossification in association with inactivating mutations of GNAS gene (20q13.2-q13.3), coding for guanine nucleotide-binding proteins. POH can, however, be distinguished clinically by the deep and progressive nature of the heterotopic bone formation.","definition_xrefs":["Orphanet:2762"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments (obsolete MONDO:0018231)","termid":"MONDO:0018231"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"disorder of GNAS inactivation","termid":"MONDO:0800466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"progressive osseous heteroplasia","secondary_identifiers":["DOID:0111535","GARD:109","OMIM:166350","MESH:C562735","NORD:1618","SCTID:719271000","MedDRA:10048902","icd11.foundation:1107209347","MEDGEN:137714","UMLS:C0334041"],"synonyms":[{"name":"POH","type":"exact"},{"name":"ectopic ossification familial type","type":"related"},{"name":"ectopic ossification, familial","type":"related"},{"name":"familial ectopic ossification","type":"exact"},{"name":"osseous heteroplasia, progressive","type":"related"},{"name":"osteoma cutis","type":"related"},{"name":"poh","type":"exact"}],"termid":"MONDO:0008153","xrefs":{"Monarch":{"xref_id":"0008153"}}}


id: MONDO:0018914
data:
  {"annotated_genes":["SJAG_00155","SJAG_01202","SJAG_03469"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014027"},{"annotations":[86197,86196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014384"}]},"cv_name":"mondo","definition":"Hypotrichosis simplex (HS) or hereditary hypotrichosis simplex (HHS) is characterized by reduced pilosity over the scalp and body (with sparse, thin, and short hair) in the absence of other anomalies.","definition_xrefs":["Orphanet:55654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_01202":null,"SJAG_03469":null},"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis simplex","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537160","MEDGEN:344257","GARD:9170","SCTID:723362004","UMLS:C1854310"],"synonyms":[{"name":"hereditary hypotrichosis simplex","type":"narrow"}],"termid":"MONDO:0018914","terms_by_termid":{"MONDO:0014027":null,"MONDO:0014384":null},"xrefs":{"Monarch":{"xref_id":"0018914"}}}


id: PBO:0110196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex associated protein","termid":"PBO:0110196"}


id: PBO:0065266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 27","termid":"PBO:0065266"}


id: PBO:0050338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 40","termid":"PBO:0050338"}


id: MONDO:0015564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Castleman disease (CD) is a benign lymphoproliferative disorder that may present as a localized or multicentric form. The clinical manifestations are heterogeneous, ranging from asymptomatic discrete lymphadenopathy to recurrent episodes of diffuse lymphadenopathy with severe systemic symptoms.","definition_xrefs":["Orphanet:160"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"human herpesvirus 8-related tumor","termid":"MONDO:0015157"},{"relation_name":"excluded_subClassOf","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"},{"relation_name":"is_a","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Castleman disease","secondary_identifiers":["SCTID:207036003","UMLS:C0017531","DOID:0111157","ICD10CM:D47.Z2","icd11.foundation:1940989685","GARD:12656","MEDGEN:42211","MESH:D005871","MedDRA:10050251","NCIT:C3056","NORD:898"],"synonyms":[{"name":"AFLH","type":"exact"},{"name":"ALNH","type":"related"},{"name":"Castleman disease","type":"exact"},{"name":"Castleman's disease","type":"exact"},{"name":"Castleman's tumor","type":"exact"},{"name":"Castleman's tumour","type":"exact"},{"name":"GLNH","type":"exact"},{"name":"angiofollicular ganglionic hyperplasia","type":"exact"},{"name":"angiofollicular lymph hyperplasia","type":"exact"},{"name":"angiofollicular lymph node hyperplasia","type":"exact"},{"name":"angiofollicular lymphoid hyperplasia","type":"exact"},{"name":"giant lymph node hyperplasia","type":"exact"},{"name":"lymphoid hamartoma","type":"exact"}],"termid":"MONDO:0015564","xrefs":{"Monarch":{"xref_id":"0015564"}}}


id: PBO:0078802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 19-2","termid":"PBO:0078802"}


id: PBO:0051567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 13 receptor subunit alpha 1","termid":"PBO:0051567"}


id: SO:0000652
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 5S rRNA is an RNA component of the large subunit of cytosolic ribosomes in both prokaryotes and eukaryotes.","direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_5S_gene","termid":"SO:0002238"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_5S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/5S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 5S LSU rRNA","type":"exact"},{"name":"cytosolic 5S rRNA","type":"exact"},{"name":"cytosolic 5S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 5S","type":"exact"}],"termid":"SO:0000652"}


id: GO:0102526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 8-desmethylnovobiocic acid = S-adenosyl-L-homocysteine + novobiocic acid + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"8-demethylnovobiocic acid C8-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14543","RHEA:36651"],"termid":"GO:0102526"}


id: PBO:0034583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_cortex,_with_protein_mislocalized_to_vacuole,_during_vegetative_growth","termid":"PBO:0034583"}


id: GO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["RESID:AA0340","PMID:12696888"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine (obsolete GO:0046924)","termid":"GO:0046924"}


id: PBO:0034533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphatidylserine_level","termid":"PBO:0034533"}


id: PBO:0059145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPL proto-oncogene, thrombopoietin receptor","termid":"PBO:0059145"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: SO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of transcribed_cluster defined by a set of transcribed sequences from the a unique gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_cluster","termid":"SO:0001457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unigene_cluster","synonyms":[{"name":"unigene cluster","type":"related"}],"termid":"SO:0001458"}


id: PBO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA kinase/phosphatase Pnk1","termid":"PBO:0001362"}


id: PBO:0054107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1472","termid":"PBO:0054107"}


id: GO:0005850
data:
  {"annotated_genes":["SJAG_03629","SJAG_00466","SJAG_05003"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70958,77238,77687],"is_not":false,"summary":null,"term":"GO:0005850"}]},"cv_name":"cellular_component","definition":"Complex of three heterogeneous polypeptide chains, that form a ternary complex with initiator methionyl-tRNA and GTP. This ternary complex binds to free 40S subunit, which subsequently binds the 5' end of mRNA.","definition_xrefs":["PMID:10216940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00466":null,"SJAG_03629":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 complex","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:EIF-2"],"synonyms":[{"name":"eIF-2","type":"exact"},{"name":"eIF2","type":"exact"}],"termid":"GO:0005850","terms_by_termid":{"GO:0005850":null}}


id: MONDO:0014643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cataract-microcephaly-nevus flammeus simplex-severe intellectual disability syndrome","secondary_identifiers":["Orphanet:464738","UMLS:C4225323","OMIM:616449","MEDGEN:897292","GARD:17821"],"synonyms":[{"name":"BASEL-Vanagaite-SMIRIN-YOSEF syndrome","type":"related"},{"name":"BVSYS","type":"related"},{"name":"Basel-Vanagait-Smirin-Yosef syndrome","type":"exact"}],"termid":"MONDO:0014643","xrefs":{"Monarch":{"xref_id":"0014643"}}}


id: PBO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3 (predicted)","termid":"PBO:0004871"}


id: GO:0048826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the cotyledon are generated and organized. The cotyledon is the modified leaf (seed leaf), found as part of the embryo in plant seeds. It is involved in either storage or absorption of food reserves. Dicotyledonous seeds contain two cotyledons, while monocotyledonous seeds contain only one. The cotyledons may appear above ground and show photosynthetic activity in the seedling.","definition_xrefs":["GOC:tb","PO:0020030","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaf morphogenesis","termid":"GO:0009965"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"cotyledon development","termid":"GO:0048825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cotyledon morphogenesis","termid":"GO:0048826"}


id: GO:0048440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the carpel over time, from its formation to the mature structure. A carpel is an organ (generally believed to be a modified foliar unit) at the centre of a flower, bearing one or more ovules and having its margins fused together or with other carpels to enclose the ovule in an ovary, and consisting also of a stigma and usually a style.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"gynoecium development","termid":"GO:0048467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel development","secondary_identifiers":["GO:0048429"],"termid":"GO:0048440"}


id: PR:O13743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pos1 gene.","definition_xrefs":["UniProtKB:O13743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.08","synonyms":[{"name":"Spom972h-pos1","type":"exact"}],"termid":"PR:O13743"}


id: PBO:0078677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 10-1","termid":"PBO:0078677"}


id: FYPO:0004796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the meiotic nuclear divisions are normal (i.e. indistinguishable from wild type) during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:22558440","PMID:25891897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis","termid":"FYPO:0000478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal azygotic meiosis","synonyms":[{"name":"normal azygotic meiotic nuclear division","type":"exact"},{"name":"normal meiosis during azygotic meiosis","type":"exact"}],"termid":"FYPO:0004796"}


id: GO:0047690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-asparagine + H+ + hydroxylamine = beta-L-aspartylhydroxamate + NH4.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartyltransferase activity (obsolete GO:0047690)","synonyms":[{"name":"L-asparagine:hydroxylamine gamma-aspartyltransferase activity","type":"related"},{"name":"aspartotransferase activity","type":"related"},{"name":"beta-aspartyl transferase activity","type":"related"}],"termid":"GO:0047690"}


id: GO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type IV secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via substance secreted by type IV secretion system involved in symbiotic interaction (obsolete GO:0052208)","synonyms":[{"name":"modification of morphology or physiology of other organism via substance secreted by type IV secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052208"}


id: MONDO:0011381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dominant beta-thalassemia is a form of beta-thalassemia resulting in moderate to severe anemia.","definition_xrefs":["Orphanet:231226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta thalassemia","termid":"MONDO:0019402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"dominant beta-thalassemia","secondary_identifiers":["OMIM:603902","SCTID:716682000","UMLS:C1858990","GARD:17164","MESH:C565834","DOID:0080770","MEDGEN:347036"],"synonyms":[{"name":"beta-thalassemia, dominant inclusion body type","type":"related"},{"name":"dyserythropoietic Anemia, congenital, Irish or Weatherall type","type":"related"},{"name":"inclusion body beta-thalassemia","type":"exact"},{"name":"thalassemia-beta, dominant inclusion-body","type":"exact"}],"termid":"MONDO:0011381","xrefs":{"Monarch":{"xref_id":"0011381"}}}


id: PBO:0081541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 454","termid":"PBO:0081541"}


id: GO:0035289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning the posterior region of the insect head anlage into gnathal (mandibular, maxillary and labial) segments. Unlike the anterior head (procephalic) segments, formation of the posterior head (gnathal) segments occurs by a similar mechanism to trunk segmentation, where a cascade of gap genes, pair-rule genes and segment-polarity genes subdivide the embryo into progressively smaller domains.","definition_xrefs":["PMID:15382136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head segmentation","termid":"GO:0035287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior head segmentation","synonyms":[{"name":"gnathal segmentation","type":"related"}],"termid":"GO:0035289"}


id: PBO:0086160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for rDNA silencing and mitotic rDNA condensation; stimulates Cdc14p phosphatase activity and biphasic release to promote rDNA repeat segregation; required for condensin recruitment to the replication fork barrier site; TOF2 has a paralog, NET1, that arose from the whole genome duplication","termid":"PBO:0086160"}


id: PBO:0038918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 2","termid":"PBO:0038918"}


id: MONDO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia (obsolete MONDO:0000134)","termid":"MONDO:0000134","xrefs":{"Monarch":{"xref_id":"0000134"}}}


id: PBO:0076469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport and golgi organization 2 homolog","termid":"PBO:0076469"}


id: MONDO:0018761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"SMARCA4-deficient sarcoma of thorax","secondary_identifiers":["Orphanet:466962","MEDGEN:1806595","UMLS:C5554190","GARD:21943","DOID:0080532"],"synonyms":[{"name":"SMARCA4-deficient thoracic sarcoma","type":"exact"}],"termid":"MONDO:0018761","xrefs":{"Monarch":{"xref_id":"0018761"}}}


id: GO:0030421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expulsion of feces from the rectum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excretion","termid":"GO:0007588"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defecation","secondary_identifiers":["Wikipedia:Defecation"],"termid":"GO:0030421"}


id: MONDO:1012094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"granule cell type cerebellar hypoplasia, non-human animal","termid":"MONDO:1011842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granule cell type cerebellar hypoplasia, dog","secondary_identifiers":["OMIA:000427-9615"],"termid":"MONDO:1012094","xrefs":{"Monarch":{"xref_id":"1012094"}}}


id: PBO:0046441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin 2","termid":"PBO:0046441"}


id: GO:0102750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: chlorophyll a + NADP = tetrahydrogeranylgeranyl-chlorophyll a + NADPH + H+.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrahydrogeranylgeranyl-chlorophyll a reductase activity (obsolete GO:0102750)","termid":"GO:0102750"}


id: MONDO:1011358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin appendage disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skin appendage disorder, non-human animal","termid":"MONDO:1011358","xrefs":{"Monarch":{"xref_id":"1011358"}}}


id: GO:0140030
data:
  {"annotated_genes":["SJAG_03230","SJAG_03255","SJAG_04384","SJAG_03628","SJAG_03345","SJAG_04396","SJAG_00837","SJAG_00052","SJAG_00941","SJAG_02625","SJAG_02992","SJAG_05252","SJAG_02701","SJAG_00591","SJAG_02500","SJAG_00184","SJAG_01325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036435"},{"annotations":[75020,78549,79778,78763,70288,76838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070577"},{"annotations":[76918,78779,76997,78241,75748,78456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035064"},{"annotations":[75236,77680,70290,75325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031593"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon post-translation modification of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00184":null,"SJAG_00591":null,"SJAG_00837":null,"SJAG_00941":null,"SJAG_01325":null,"SJAG_02500":null,"SJAG_02625":null,"SJAG_02701":null,"SJAG_02992":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03345":null,"SJAG_03628":null,"SJAG_04384":null,"SJAG_04396":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"modification-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"modified protein binding","type":"related"}],"termid":"GO:0140030","terms_by_termid":{"GO:0031593":null,"GO:0035064":null,"GO:0036435":null,"GO:0070577":null}}


id: GO:0030051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacts selectively with the immunosuppressant FK506, and possesses peptidyl-prolyl isomerase activity (catalysis of the reaction: peptidoproline (omega=180) = peptidylproline (omega=0)).","definition_xrefs":["ISBN:0198506732","EC:5.2.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete FK506-sensitive peptidyl-prolyl cis-trans isomerase (obsolete GO:0030051)","synonyms":[{"name":"FK506 binding protein","type":"related"},{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"exact"},{"name":"FKBP","type":"related"}],"termid":"GO:0030051"}


id: PBO:0059392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S25 pseudogene 1","termid":"PBO:0059392"}


id: PBO:0043704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 1","termid":"PBO:0043704"}


id: GO:0061425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of an ethanol catabolic process.","definition_xrefs":["GOC:dph","PMID:10608811","PMID:7760841"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061425)","termid":"GO:0061425"}


id: PBO:0016993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein; involved in phospholipid metabolism (predicted)","termid":"PBO:0016993"}


id: PBO:0109650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked (pseudogene)","termid":"PBO:0109650"}


id: FYPO:0008317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase, when cells the population are subject to sulfur starvation.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability in stationary phase","termid":"FYPO:0000245"},{"relation_name":"is_a","term_name":"loss of viability upon sulfur starvation","termid":"FYPO:0007088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability in stationary phase upon sulfur starvation","termid":"FYPO:0008317"}


id: PBO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocyctinuria","termid":"PBO:0001097"}


id: PBO:0070401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP1 like 1","termid":"PBO:0070401"}


id: PBO:0108672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK/PAR-1 kinase Kin1","termid":"PBO:0108672"}


id: PBO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2-like (predicted)","termid":"PBO:0000885"}


id: PBO:0078220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 10-1","termid":"PBO:0078220"}


id: GO:0015908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fatty acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fatty acid transport","termid":"GO:0015908"}


id: GO:0098527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction in which the target muscle cell is a somatic muscle cell, such as those found in nematodes and arthropods.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction of somatic muscle","termid":"GO:0098527"}


id: MONDO:0006088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circumscribed neoplasm arising from the glandular epithelium of the appendix. Morphologically, it is characterized by a proliferation of neoplastic glandular cells and it is associated with dysplasia. According to the growth pattern, it may be classified as tubular, villous, or tubulovillous. The dysplasia is classified as mild, moderate, or severe.","definition_xrefs":["NCIT:C43550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenoma","termid":"MONDO:0000527"},{"relation_name":"is_a","term_name":"epithelial tumor of the appendix","termid":"MONDO:0018511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"appendix adenoma","secondary_identifiers":["UMLS:C1706829","EFO:1000089","MEDGEN:312900"],"synonyms":[{"name":"appendix adenoma","type":"exact"},{"name":"vermiform appendix adenoma","type":"exact"}],"termid":"MONDO:0006088","xrefs":{"Monarch":{"xref_id":"0006088"}}}


id: PBO:0116677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 8B","termid":"PBO:0116677"}


id: PBO:0066587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho related BTB domain containing 2","termid":"PBO:0066587"}


id: SO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a nucleotide polymer has two strands that are reverse-complement to one another and pair together.","direct_ancestors":[{"relation_name":"is_a","term_name":"strand_attribute","termid":"SO:0000983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double","termid":"SO:0000985"}


id: PBO:0090049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease","termid":"PBO:0090049"}


id: PBO:0011090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit Vps16 (predicted)","termid":"PBO:0011090"}


id: PBO:0017677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large and small subunit Gsa1","termid":"PBO:0017677"}


id: PBO:0043807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase N subunit 1","termid":"PBO:0043807"}


id: PBO:0078429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (GCC) 6-1","termid":"PBO:0078429"}


id: GO:0030768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxy-16-methoxy-2,3-dihydrotabersonine + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + deacetoxyvindoline + H+.","definition_xrefs":["RHEA:11336","EC:2.1.1.99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"16-methoxy-2,3-dihydro-3-hydroxytabersonine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04013","MetaCyc:2.1.1.99-RXN"],"synonyms":[{"name":"16-methoxy-2,3-dihydro-3-hydroxytabersonine methyltransferase activity","type":"related"},{"name":"3-hydroxy-16-methoxy-2,3-dihydrotabersonine N-methyltransferase activity","type":"related"},{"name":"NMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:16-methoxy-2,3-dihydro-3-hydroxytabersonine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3-hydroxy-16-methoxy-2,3-dihydrotabersonine N-methyltransferase activity","type":"related"}],"termid":"GO:0030768"}


id: PBO:0072411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 16","termid":"PBO:0072411"}


id: GO:0060913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in cardiac cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"cardiac cell fate commitment","termid":"GO:0060911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac cell fate determination","synonyms":[{"name":"cardiocyte cell fate determination","type":"related"}],"termid":"GO:0060913"}


id: PBO:0038486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 1","termid":"PBO:0038486"}


id: GO:0006054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-acetylneuraminate metabolic process","synonyms":[{"name":"N-acetylneuraminate metabolism","type":"exact"},{"name":"sialic acid metabolic process","type":"broad"},{"name":"sialic acid metabolism","type":"broad"}],"termid":"GO:0006054"}


id: PR:Q9UU88
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylate kinase isoenzyme 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04983","PANTHER:PTHR12595:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase isoenzyme 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.11c","secondary_identifiers":["UniProtKB:Q9UU88"],"synonyms":[{"name":"AK/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AK6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AK6","type":"exact"},{"name":"dual activity adenylate kinase/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU88"}


id: GO:0030720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Directed movement of the oocyte, following its specification, from its original central position in the cyst to a posterior position relative to the nurse cells of the egg chamber, and its maintenance in this posterior location. This is the first sign of anterior-posterior asymmetry in the developing egg chamber.","definition_xrefs":["PMID:10449356","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization of cell","termid":"GO:0051674"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"oocyte localization involved in germarium-derived egg chamber formation","synonyms":[{"name":"establishment and maintenance of oocyte localization in egg chamber","type":"exact"},{"name":"establishment and maintenance of oocyte position during oogenesis","type":"exact"},{"name":"oocyte localisation involved in germarium-derived egg chamber formation","type":"exact"},{"name":"oocyte localization during germarium-derived egg chamber formation","type":"related"},{"name":"oocyte localization during oogenesis","type":"related"},{"name":"oocyte positioning during oogenesis","type":"narrow"},{"name":"oogenesis, establishment and maintenance of oocyte localization","type":"exact"},{"name":"oogenesis, oocyte localization","type":"exact"}],"termid":"GO:0030720"}


id: PATO:0001248
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark cyan","termid":"PATO:0001248"}


id: GO:0009881
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"}]},"cv_name":"molecular_function","definition":"The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.","definition_xrefs":["GOC:go_curators","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"synonyms":[{"name":"UV-sensitive opsin","type":"narrow"},{"name":"blue-sensitive opsin","type":"narrow"},{"name":"green-sensitive opsin","type":"narrow"},{"name":"long-wave-sensitive opsin","type":"narrow"},{"name":"opsin","type":"narrow"},{"name":"red-sensitive opsin","type":"narrow"},{"name":"short-wave-sensitive opsin","type":"narrow"},{"name":"violet-sensitive opsin","type":"narrow"}],"termid":"GO:0009881","terms_by_termid":{"GO:0009882":null}}


id: GO:0033679
data:
  {"annotated_genes":["SJAG_00857","SJAG_00884","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106227,107047,115090],"is_not":false,"summary":null,"term":"GO:0033679"}]},"cv_name":"molecular_function","definition":"Unwinding of a DNA/RNA duplex in the 3' to 5' direction, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA helicase activity","termid":"GO:0033677"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"3'-5' DNA/RNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033681"],"synonyms":[{"name":"3' to 5' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 3' to 5' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 3'-5' DNA/RNA helicase activity","type":"exact"}],"termid":"GO:0033679","terms_by_termid":{"GO:0033679":null}}


id: PBO:0068031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 336","termid":"PBO:0068031"}


id: PBO:0058337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4711","termid":"PBO:0058337"}


id: MONDO:0010540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder characterized by formation of bullae without traumatic origin, alopecia, hyperpigmentation, acrocyanosis, short stature, microcephaly, intellectual deficit, tapering fingers and nail abnormalities. Two families (one of whom was Dutch and the other Italian) have been described up to now, in which only males were affected. Transmission is X-linked recessive. The bullous dystrophy locus has been mapped to Xq26.3 in the Italian family and to Xq27.3 in the Dutch family.","definition_xrefs":["Orphanet:1867"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullous dystrophy, macular type","secondary_identifiers":["GARD:1038","OMIM:302000","UMLS:C0795974","MESH:C563065","MEDGEN:167089"],"synonyms":[{"name":"EBM","type":"related"},{"name":"bullous dystrophy hereditary macular type","type":"related"},{"name":"bullous dystrophy, hereditary macular type","type":"related"},{"name":"epidermolysis bullosa macular type","type":"related"},{"name":"epidermolysis bullosa, macular type","type":"related"}],"termid":"MONDO:0010540","xrefs":{"Monarch":{"xref_id":"0010540"}}}


id: FYPO:0007073
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118916],"is_not":false,"summary":null,"term":"FYPO:0007073"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear envelope is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear envelope during vegetative growth","termid":"FYPO:0004885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nuclear envelope during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01050"],"single_locus_genotype_uniquenames":["nur1delta"],"synonyms":[{"name":"decreased protein localisation to nuclear envelope during vegetative growth","type":"exact"},{"name":"decreased protein localization to nuclear envelope during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to nuclear envelope during vegetative growth","type":"exact"}],"termid":"FYPO:0007073","terms_by_termid":{"FYECO:0000137":null,"FYPO:0007073":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0065747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase 2","termid":"PBO:0065747"}


id: PBO:0055965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 78, pseudogene","termid":"PBO:0055965"}


id: PBO:0073635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 21, pseudogene","termid":"PBO:0073635"}


id: FYPO:0000704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another is abnormal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-protein interaction phenotype","termid":"FYPO:0000702"},{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal protein-protein interaction","synonyms":[{"name":"abnormal protein binding","type":"exact"}],"termid":"FYPO:0000704"}


id: GO:0045243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Cytosolic complex that possesses isocitrate dehydrogenase (NAD+) activity.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic isocitrate dehydrogenase complex (NAD+) (obsolete GO:0045243)","synonyms":[{"name":"isocitrate dehydrogenase complex (NAD+)","type":"broad"}],"termid":"GO:0045243"}


id: GO:0045348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of MHC class II biosynthetic process","termid":"GO:0045346"},{"relation_name":"positively_regulates","term_name":"MHC class II biosynthetic process","termid":"GO:0045342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of MHC class II biosynthetic process","synonyms":[{"name":"activation of MHC class II biosynthetic process","type":"narrow"},{"name":"positive regulation of MHC class II anabolism","type":"exact"},{"name":"positive regulation of MHC class II biosynthesis","type":"exact"},{"name":"positive regulation of MHC class II formation","type":"exact"},{"name":"positive regulation of MHC class II synthesis","type":"exact"},{"name":"positive regulation of major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"positive regulation of major histocompatibility complex class II biosynthetic process","type":"exact"},{"name":"stimulation of MHC class II biosynthetic process","type":"narrow"},{"name":"up regulation of MHC class II biosynthetic process","type":"exact"},{"name":"up-regulation of MHC class II biosynthetic process","type":"exact"},{"name":"upregulation of MHC class II biosynthetic process","type":"exact"}],"termid":"GO:0045348"}


id: PBO:0028699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_catabolic_process","termid":"PBO:0028699"}


id: PATO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being fibrous tissue that replaces normal tissue destroyed by injury or disease.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scarred","termid":"PATO:0001850"}


id: FYPO:0008363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar ring formation does not occur. Nucleolarrings are inclusion bodies located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress or starvation.","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein aggregate center formation","termid":"FYPO:0007300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished nucleolar ring formation","synonyms":[{"name":"abolished nucleolar peripheral inclusion body formation","type":"exact"},{"name":"abolished nucleolar ring assembly","type":"exact"}],"termid":"FYPO:0008363"}


id: FYECO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Describes experimental conditions in which the amount of oxygen available during growth or the assay was controlled.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000133 oxygen level (obsolete FYECO:0000133)","termid":"FYECO:0000133"}


id: PBO:0091240
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncation LoF variant reverts to normal in strain CBS5557","termid":"PBO:0091240"}


id: FYPO:0000523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisomal transport does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peroxisomal transport","termid":"FYPO:0000522"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished peroxisomal transport","synonyms":[{"name":"abolished peroxisomal transport during mitotic cell cycle","type":"related"},{"name":"absent peroxisomal transport","type":"exact"},{"name":"peroxisomal transport abolished","type":"exact"},{"name":"peroxisomal transport abolished during vegetative growth","type":"exact"},{"name":"peroxisomal transport: absent","type":"related"}],"termid":"FYPO:0000523"}


id: MONDO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually solitary polypoid lesion that arises from the cervix. It usually affects women in their reproductive years. It is characterized by the presence of a connective tissue core and overlying epithelium.","definition_xrefs":["NCIT:C40200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical polyp","termid":"MONDO:0000751"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical fibroepithelial polyp","secondary_identifiers":["UMLS:C1516413","MEDGEN:308945"],"synonyms":[{"name":"Cervical fibroepithelial polyp","type":"exact"},{"name":"uterine cervix fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060777","xrefs":{"Monarch":{"xref_id":"0060777"}}}


id: PBO:0027591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_UV","termid":"PBO:0027591"}


id: GO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sporangiospore formation","termid":"GO:0075287"},{"relation_name":"is_a","term_name":"regulation of aplanospore formation","termid":"GO:0075290"},{"relation_name":"positively_regulates","term_name":"aplanospore formation","termid":"GO:0075289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aplanospore formation","termid":"GO:0075291"}


id: MONDO:0060702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, di rocco type","secondary_identifiers":["MEDGEN:1646454","UMLS:C4693799","OMIM:617974"],"synonyms":[{"name":"SEMDDR","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Di Rocco type","type":"related"}],"termid":"MONDO:0060702","xrefs":{"Monarch":{"xref_id":"0060702"}}}


id: MONDO:0002473
data:
  {"annotated_genes":["SJAG_03280","SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010916"},{"annotations":[85515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031062"}]},"cv_name":"mondo","definition":"A congenital or acquired kidney disorder characterized by the presence of renal cysts.","definition_xrefs":["NCIT:C34750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00394":null,"SJAG_03280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"cystic kidney disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2975","ICD10CM:Q61","MEDGEN:854361","SCTID:722223000","UMLS:C3887499","EFO:0008615","MESH:D052177","NANDO:2200172"],"synonyms":[{"name":"cystic renal disease","type":"exact"},{"name":"kidney cyst","type":"exact"},{"name":"renal cyst","type":"exact"}],"termid":"MONDO:0002473","terms_by_termid":{"MONDO:0010916":null,"MONDO:0031062":null},"xrefs":{"Monarch":{"xref_id":"0002473"}}}


id: PBO:0031911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-threonyl-carbamoyl-adenosine (t6A) Sua5 (predicted)","termid":"PBO:0031911"}


id: PBO:0059577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 4","termid":"PBO:0059577"}


id: PR:O59683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor IF-2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor IF-2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.15c","secondary_identifiers":["UniProtKB:O59683"],"synonyms":[{"name":"IF-2(Mt) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IF-2Mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IF2(mt) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTIF2","type":"exact"}],"termid":"PR:O59683"}


id: GO:1905390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukotriene B4 stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:14656734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to leukotriene B4","termid":"GO:1905389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leukotriene B4","synonyms":[{"name":"cellular response to LTB4","type":"exact"}],"termid":"GO:1905390"}


id: FYPO:0002087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles at one or both cell tips than normal during interphase of the mitotic cell cycle, when the cell is growing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"exocytic vesicles present in increased numbers at cell tip during mitotic interphase","synonyms":[{"name":"accumulation of exocytic vesicles at cell tip during mitotic interphase","type":"related"},{"name":"additional exocytic vesicles present at cell tip during mitotic interphase","type":"exact"},{"name":"exocytic vesicles present in greater numbers at cell tip during mitotic interphase","type":"exact"},{"name":"exocytic vesicles present in increased numbers at cell end during mitotic interphase","type":"exact"},{"name":"exocytic vesicles present in increased numbers at cell tip during cell growth","type":"exact"},{"name":"exocytic vesicles present in increased numbers at cell tip during cell growth during interphase of mitotic cell cycle","type":"exact"},{"name":"exocytic vesicles present in increased numbers at cell tip during mitotic interphase during vegetative growth","type":"exact"},{"name":"exocytotic vesicles present in increased numbers at cell tip during mitotic interphase","type":"exact"},{"name":"extra exocytic vesicles at cell tip during mitotic interphase","type":"exact"},{"name":"post-Golgi secretory vesicles present in increased numbers at cell tip during mitotic interphase","type":"related"}],"termid":"FYPO:0002087"}


id: MONDO:0009925
data:
  {"annotated_genes":["SJAG_01344","SJAG_05213","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84925,84926,84927],"is_not":false,"summary":null,"term":"MONDO:0009925"}]},"cv_name":"mondo","definition":"An autosomal recessive form of PXE.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"excluded_subClassOf","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"excluded_subClassOf","term_name":"pseudoxanthoma elasticum (inherited or acquired)","termid":"MONDO:0024308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"inherited pseudoxanthoma elasticum","termid":"MONDO:0100091"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive inherited pseudoxanthoma elasticum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:264800","SCTID:239140003","NORD:1629","icd11.foundation:1516160852","SCTID:402782006","ICD9:757.39","SCTID:72744008","UMLS:C1275116","DOID:2738","MedDRA:10037150","MEDGEN:698415","MESH:D011561","NCIT:C85036","Orphanet:758"],"synonyms":[{"name":"AR inherited pseudoxanthoma elasticum","type":"exact"},{"name":"Gronblad Strandberg syndrome","type":"related"},{"name":"Gronblad-Strandberg syndrome","type":"exact"},{"name":"Gronblad-Strandberg-Touraine syndrome","type":"exact"},{"name":"PXE","type":"exact"},{"name":"PXE, modifier of severity of","type":"related"},{"name":"Pseudoxanthoma Elasticum","type":"exact"},{"name":"pseudoxanthoma elasticum","type":"related"},{"name":"pseudoxanthoma elasticum, modifier of severity of","type":"related"}],"termid":"MONDO:0009925","terms_by_termid":{"MONDO:0009925":null},"xrefs":{"Monarch":{"xref_id":"0009925"}}}


id: PBO:0000571
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.62","termid":"PBO:0000571"}


id: PBO:0076007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIMATE-MUSTN1 readthrough","termid":"PBO:0076007"}


id: PBO:0075570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin 1","termid":"PBO:0075570"}


id: GO:1990870
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A polymer of proteins that form a fine fiber.","definition_xrefs":["PMID:12764608"],"gene_count":0,"genotype_count":0,"name":"obsolete protein fibril (obsolete GO:1990870)","termid":"GO:1990870"}


id: GO:0005290
data:
  {"annotated_genes":["SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78857,97133],"is_not":false,"summary":null,"term":"GO:0005290"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-histidine from one side of a membrane to the other. L-histidine is 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-histidine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-histidine transporter activity","type":"broad"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"}],"termid":"GO:0005290","terms_by_termid":{"GO:0005290":null}}


id: PBO:0027252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_cells_with_astral_spindle_microtubules","termid":"PBO:0027252"}


id: PBO:0038990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADRM1 26S proteasome ubiquitin receptor","termid":"PBO:0038990"}


id: GO:0009579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.","definition_xrefs":["GOC:ds","ISBN:0198506732","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thylakoid","secondary_identifiers":["Wikipedia:Thylakoid"],"synonyms":[{"name":"photosynthetic membrane","type":"related"}],"termid":"GO:0009579"}


id: GO:0019029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form a protein helix with the genetic material contained within. Tobacco mosaic virus has such a capsid structure.","definition_xrefs":["UniProtKB-KW:KW-1139","ISBN:071673706X","VZ:885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"helical viral capsid","termid":"GO:0019029"}


id: MONDO:0020590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection due to organisms from the genus Mycobacteria.","definition_xrefs":["NCIT:C26831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycobacterial infectious disease","secondary_identifiers":["MESH:D009164","SCTID:88415009","MEDGEN:6479","UMLS:C0026918"],"synonyms":[{"name":"mycobacterial infection","type":"exact"},{"name":"mycobacteriosis","type":"exact"},{"name":"mycobacterium infection","type":"exact"}],"termid":"MONDO:0020590","xrefs":{"Monarch":{"xref_id":"0020590"}}}


id: PBO:0004497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Nca2 (predicted)","termid":"PBO:0004497"}


id: GO:0036400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a short neuropeptide F and transmitting the signal within the cell to initiate a change in cell activity. Short neuropeptide F is an arthropod peptide of less than 28 residues (as small as 8-10 residues in some species) with a C-terminal RFamide or LRFamide.","definition_xrefs":["PMID:21440021","GOC:ha","PMID:16330127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"short neuropeptide F receptor activity","synonyms":[{"name":"sNPF receptor activity","type":"exact"}],"termid":"GO:0036400"}


id: PBO:0030880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_organization_during_vegetative_growth","termid":"PBO:0030880"}


id: MONDO:0019624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired angioedema (AAE) is characterized by the occurrence of transitory and recurrent subcutaneous and/or submucosal edemas resulting in swelling and/or abdominal pain due to an acquired C1 inhibitor (C1-INH) deficiency.","definition_xrefs":["Orphanet:91385"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-histaminic angioedema","termid":"MONDO:0019013"},{"relation_name":"is_a","term_name":"angioedema","termid":"MONDO:0010481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired angioedema","secondary_identifiers":["icd11.foundation:1078767412","MEDGEN:419486","UMLS:C2931758","GARD:8605","MESH:C538173","DOID:0080941"],"synonyms":[{"name":"AAE","type":"exact"},{"name":"acquired C1 inhibitor deficiency","type":"exact"},{"name":"acquired angioedema","type":"exact"},{"name":"acquired angioneurotic edema","type":"exact"},{"name":"acquired angioneurotic oedema","type":"exact"},{"name":"acquired bradykinine-induced angioedema","type":"exact"},{"name":"acquired non histamine-induced angioedema","type":"exact"},{"name":"angioedema, acquired","type":"related"}],"termid":"MONDO:0019624","xrefs":{"Monarch":{"xref_id":"0019624"}}}


id: PBO:0113509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating the osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation; involved in myosin-V dependent inheritance of mitochondria, peroxisomes, vacuoles and secretory vesicles; localizes to the nucleus, cytoplasm and peroxisomes","termid":"PBO:0113509"}


id: GO:0030392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine catabolic process","synonyms":[{"name":"fructosamine breakdown","type":"exact"},{"name":"fructosamine catabolism","type":"exact"},{"name":"fructosamine degradation","type":"exact"}],"termid":"GO:0030392"}


id: PBO:0029905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_Golgi_apparatus","termid":"PBO:0029905"}


id: PBO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh1 (predicted)","termid":"PBO:0000168"}


id: GO:0046183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-idonate, the anion of idonic acid, an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"L-idonate metabolic process","termid":"GO:0019523"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"L-idonate catabolic process","synonyms":[{"name":"L-idonate breakdown","type":"exact"},{"name":"L-idonate catabolism","type":"exact"},{"name":"L-idonate degradation","type":"exact"}],"termid":"GO:0046183"}


id: GO:0008575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP for channel gating and polypeptide unfolding before proteolysis in the proteasome. Six ATPase subunits are present in the regulatory particle (RP) of 26S proteasome.","definition_xrefs":["EC:3.6.4.8"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome ATPase activity (obsolete GO:0008575)","synonyms":[{"name":"proteasome ATPase activity","type":"exact"}],"termid":"GO:0008575"}


id: SO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes some but not all loss of polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_loss_of_function_variant","termid":"SO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_partial_loss_of_function","synonyms":[{"name":"polypeptide partial loss of function","type":"exact"}],"termid":"SO:0001561"}


id: PBO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease, unknown 3 (predicted)","termid":"PBO:0001807"}


id: PBO:0009381
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position","termid":"PBO:0009381"}


id: GO:1990147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a talin, a family of related cytoskeletal proteins that play a role in assembly of actin filaments and migration of various cell types.","definition_xrefs":["GOC:hjd","PMID:23372168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"talin binding","termid":"GO:1990147"}


id: GO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-excision repair","termid":"GO:2000819"},{"relation_name":"regulates","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription-coupled nucleotide-excision repair","termid":"GO:0090262"}


id: MONDO:0035362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the TRIM22 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","PMID:26836588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"TRIM22-related inflammatory bowel disease","secondary_identifiers":["Orphanet:597201","MEDGEN:1842464","GARD:22395","UMLS:C5680271"],"synonyms":[{"name":"TRIM22-related IBD","type":"exact"}],"termid":"MONDO:0035362","xrefs":{"Monarch":{"xref_id":"0035362"}}}


id: GO:0043444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of acetone, propan-2-one.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone catabolic process (obsolete GO:0043444)","synonyms":[{"name":"2-propanone catabolic process","type":"exact"},{"name":"2-propanone catabolism","type":"exact"},{"name":"acetone breakdown","type":"exact"},{"name":"acetone catabolism","type":"exact"},{"name":"acetone degradation","type":"exact"},{"name":"dimethyl ketone catabolic process","type":"exact"},{"name":"dimethyl ketone catabolism","type":"exact"},{"name":"propan-2-one catabolic process","type":"exact"},{"name":"propan-2-one catabolism","type":"exact"}],"termid":"GO:0043444"}


id: MONDO:0010159
data:
  {"annotated_genes":["SJAG_01620"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86702],"is_not":false,"summary":null,"term":"MONDO:0010159"}]},"cv_name":"mondo","definition":"A rare childhood cancer predisposition syndrome caused by biallelic inheritance of mutations in MLH1, MSH2, MSH6, or PMS2 genes. It is characterized by the development of childhood cancers, usually hematological malignancies and/or brain tumors, and colorectal cancers with multiple intestinal polyps. The majority of patients show signs of neurofibromatosis type 1.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete immunodeficiency with severe reduction in serum IgG and IgA with normal/elevated IgM and normal number of B-cells (obsolete MONDO:0018040)","termid":"MONDO:0018040"},{"relation_name":"excluded_subClassOf","term_name":"DNA repair disease","termid":"MONDO:0021190"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"mismatch repair cancer syndrome","termid":"MONDO:0031219"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"mismatch repair cancer syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:420","MEDGEN:1748029","MESH:C536928","UMLS:C5399763","SCTID:61665008","NCIT:C130202","OMIM:276300","NORD:1805"],"synonyms":[{"name":"BTP1 syndrome","type":"exact"},{"name":"CMMR-D","type":"exact"},{"name":"CMMR-D syndrome","type":"exact"},{"name":"CNS tumors with familial polyposis of the colon","type":"related"},{"name":"CNS tumours with familial polyposis of the colon","type":"related"},{"name":"MMR deficiency","type":"related"},{"name":"MMRCS","type":"related"},{"name":"MMRCS1","type":"exact"},{"name":"Turcot Syndrome","type":"exact"},{"name":"Turcot syndrome","type":"related"},{"name":"brain tumor-polyposis syndrome","type":"related"},{"name":"brain tumor-polyposis syndrome 1","type":"exact"},{"name":"childhood cancer syndrome","type":"related"},{"name":"constitutional MIS-match repair deficiency syndrome","type":"exact"},{"name":"constitutional mismatch repair deficiency syndrome","type":"exact"},{"name":"glioma-polyposis syndrome","type":"related"},{"name":"malignant tumors of the central nervous system associated with familial polyposis of the colon","type":"related"},{"name":"malignant tumours of the central nervous system associated with familial polyposis of the colon","type":"related"},{"name":"mismatch repair cancer syndrome","type":"related"},{"name":"mismatch repair cancer syndrome 1","type":"exact"},{"name":"mismatch repair deficiency","type":"related"}],"termid":"MONDO:0010159","terms_by_termid":{"MONDO:0010159":null},"xrefs":{"Monarch":{"xref_id":"0010159"}}}


id: PBO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U5","termid":"PBO:0004419"}


id: MONDO:1012518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune-mediated myositis, non-human animal","termid":"MONDO:1011806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune-mediated myositis, horse","secondary_identifiers":["OMIA:002141-9796"],"termid":"MONDO:1012518","xrefs":{"Monarch":{"xref_id":"1012518"}}}


id: GO:2000260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation, common pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"blood coagulation, common pathway","termid":"GO:0072377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of blood coagulation, common pathway","termid":"GO:2000260"}


id: GO:0019865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"immunoglobulin binding","termid":"GO:0019865"}


id: PBO:0060763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 7","termid":"PBO:0060763"}


id: GO:0010549
data:
  {"annotated_genes":["SJAG_00840","SJAG_00680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93596,103454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane disassembly.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"membrane disassembly","termid":"GO:0030397"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of membrane disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010549","terms_by_termid":{"GO:1905557":null}}


id: MONDO:1010812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, domestic cat","secondary_identifiers":["OMIA:000810-9685"],"termid":"MONDO:1010812","xrefs":{"Monarch":{"xref_id":"1010812"}}}


id: GO:1900046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemostasis","termid":"GO:1900046"}


id: GO:0090620
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An anaphase promoting complex bound to the fizzy family APC activator Cdc20/Slp1 which regulates the metaphase anaphase transition by activating the APC/C to target the anaphase inhibitor securin and promotes sister chromatid separation.","definition_xrefs":["GOC:vw","PMID:10921876"],"gene_count":0,"genotype_count":0,"name":"obsolete APC-Cdc20 complex (obsolete GO:0090620)","synonyms":[{"name":"APC-Slp1 complex","type":"exact"},{"name":"APC-fizzy complex","type":"exact"},{"name":"mitotic anaphase promotic complex","type":"related"}],"termid":"GO:0090620"}


id: PBO:0036469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrof olatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase Ade9","termid":"PBO:0036469"}


id: PBO:0018051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase, involved in regulation of autophagy Ppm1 (predicted)","termid":"PBO:0018051"}


id: PBO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphospho-oligosaccharide-protein glycosyltransferase Ost1 (predicted)","termid":"PBO:0002472"}


id: MOD:01599
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-118 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01599"}


id: PBO:0044405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily D member 7 (gene/pseudogene)","termid":"PBO:0044405"}


id: PBO:0061662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 35 pseudogene 2","termid":"PBO:0061662"}


id: GO:1900874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heptadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heptadec-1-ene metabolic process","synonyms":[{"name":"heptadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900874"}


id: PBO:0072714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 1","termid":"PBO:0072714"}


id: PBO:0066166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 3","termid":"PBO:0066166"}


id: FYPO:0004071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0004071"}


id: MOD:00534
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:176","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to cysteine and lysine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:00534"}


id: PBO:0080509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS2 antisense RNA 1","termid":"PBO:0080509"}


id: PBO:0056382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 12","termid":"PBO:0056382"}


id: GO:0102884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = zingiberene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.65","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-zingiberene synthase activity","secondary_identifiers":["RHEA:28643","MetaCyc:RXN-8425"],"termid":"GO:0102884"}


id: GO:0043910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + factor gamma-F420-2 + H+ = coenzyme F390-A + diphosphate.","definition_xrefs":["MetaCyc:RXN-9385","PMID:8550473","GOC:jl","PMID:7957247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"ATP:coenzyme F420 adenylyltransferase activity","synonyms":[{"name":"ATP:coenzyme F420 adenyltransferase activity","type":"exact"},{"name":"coenzyme F390-A synthetase activity","type":"exact"}],"termid":"GO:0043910"}


id: PBO:0090653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1","termid":"PBO:0090653"}


id: PBO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mcp2","termid":"PBO:0005113"}


id: PBO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxymuconolactone decarboxylase-like protein, Pxp2","termid":"PBO:0089719"}


id: PBO:0057004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 98","termid":"PBO:0057004"}


id: GO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in large arteries and responding to the input via central nervous system control.","definition_xrefs":["GOC:tb","ISBN:0721643949","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","synonyms":[{"name":"baroreceptor feedback control of blood pressure","type":"related"},{"name":"baroreceptor pressure buffer system","type":"related"},{"name":"carotid sinus baroreceptor feedback regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001978"}


id: GO:0018746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-3,4-oxide + H2O = trans-3,4-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-3,4-epoxide hydrolase activity (obsolete GO:0018746)","termid":"GO:0018746"}


id: GO:2000050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of non-canonical Wnt signaling pathway.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"regulates","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of non-canonical Wnt signaling pathway","synonyms":[{"name":"regulation of beta-catenin-independent Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of non-canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of non-canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of non-canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:2000050"}


id: PBO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 3","termid":"PBO:0070537"}


id: PBO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 8","termid":"PBO:0071350"}


id: PBO:0077217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 16 homolog","termid":"PBO:0077217"}


id: MONDO:0026720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 12","secondary_identifiers":["UMLS:C4746984","GARD:15283","MEDGEN:1648278","OMIM:301020","DOID:0112099"],"synonyms":[{"name":"MC1DN12","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 12","type":"related"},{"name":"mitochondrial complex i deficiency, nuclear type 12, X-linked recessive","type":"exact"}],"termid":"MONDO:0026720","xrefs":{"Monarch":{"xref_id":"0026720"}}}


id: GO:0048646
data:
  {"annotated_genes":["SJAG_01993","SJAG_00514","SJAG_01769","SJAG_04781","SJAG_04275","SJAG_04010","SJAG_01943","SJAG_01794","SJAG_01531","SJAG_05309","SJAG_02718","SJAG_02864","SJAG_02169","SJAG_01017","SJAG_00826","SJAG_02989","SJAG_04901","SJAG_00821","SJAG_03915","SJAG_04238","SJAG_01483","SJAG_03250","SJAG_04140","SJAG_00663","SJAG_02529","SJAG_03453","SJAG_04853","SJAG_00114","SJAG_03483","SJAG_03587","SJAG_03090","SJAG_02241","SJAG_04184","SJAG_02379","SJAG_00993","SJAG_03746","SJAG_04615","SJAG_04470","SJAG_04271","SJAG_00486","SJAG_01894","SJAG_04868","SJAG_04080","SJAG_01662","SJAG_04483","SJAG_04922","SJAG_01321","SJAG_04236","SJAG_03057","SJAG_02320","SJAG_04859","SJAG_02248","SJAG_03013","SJAG_00974","SJAG_02736","SJAG_04509","SJAG_00971","SJAG_03688","SJAG_03536","SJAG_02700","SJAG_00405","SJAG_02712","SJAG_03557"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104920,100513,112508,111308,96285,96707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[111113,93776],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94222],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[87957,88450,89998,91527],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[72696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[103958,108873,117594,113886,117602],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[72697,91257,104771],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031321"},{"annotations":[97325,99690,95131,98613,91046,105087,109912,107184,113733,118343,118644,118824,97364,101498],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[92049,113734,96640,97326,99623,103916,99622,102706,106631,107518],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[92269,98683,114124,88004,98074,98765],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[110996],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[102079],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[90482],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[93237,89615,111163,90602,87641],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902917"},{"annotations":[91946],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[116738],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[99625,105811,94264,99624,99905,115780],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02379":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02736":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03453":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure formation involved in morphogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"formation of an anatomical structure involved in morphogenesis","type":"exact"}],"termid":"GO:0048646","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1902917":null,"GO:1903023":null,"GO:1903024":null,"GO:1904600":null}}


id: PBO:0085209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidoreductase of the mitochondrial inner membrane; involved in cytoplasmic and mitochondrial iron homeostasis and required for activity of Fe-S cluster-containing enzymes; one of the few mitochondrial proteins essential for viability","termid":"PBO:0085209"}


id: MONDO:0001414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant inherited disorder characterized by the presence of small areas of increased density throughout the bones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosclerosis","termid":"MONDO:0002933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopoikilosis","secondary_identifiers":["HP:0010739","icd11.foundation:801926378","NANDO:2201024","DOID:11991","MEDGEN:45251","ICD9:756.53","MESH:D010023","NCIT:C84985","SCTID:9147009","UMLS:C0029455"],"synonyms":[{"name":"osteopathia condensans disseminata","type":"related"},{"name":"osteopoikilosis","type":"exact"},{"name":"osteopoikilosis (disease)","type":"exact"},{"name":"spotted bones","type":"related"}],"termid":"MONDO:0001414","xrefs":{"Monarch":{"xref_id":"0001414"}}}


id: GO:1904933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation in midbrain.","definition_xrefs":["GOC:PARL","PMID:18953410","GOC:TermGenie","PMID:24431302","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"regulates","term_name":"cell proliferation in midbrain","termid":"GO:0033278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation in midbrain","synonyms":[{"name":"regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"regulation of mesencepahalic cell proliferation","type":"related"}],"termid":"GO:1904933"}


id: MONDO:0033366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 57","secondary_identifiers":["MEDGEN:1621769","UMLS:C4540411","DOID:0080284","OMIM:617771"],"synonyms":[{"name":"DEE57","type":"exact"},{"name":"EIEE57","type":"exact"},{"name":"developmental and epileptic encephalopathy 57","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 57","type":"exact"},{"name":"infantile epileptic encephalopathy 57","type":"exact"}],"termid":"MONDO:0033366","xrefs":{"Monarch":{"xref_id":"0033366"}}}


id: PBO:0066660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor interacting serine/threonine kinase 2","termid":"PBO:0066660"}


id: MONDO:0100430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver disease characterized by the presence of excessive fibrous connective tissue in the liver.","definition_xrefs":["PMID:31722201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"fibrotic liver disease","synonyms":[{"name":"hepatic fibrosis (disease)","type":"exact"},{"name":"liver fibrosis (disease)","type":"exact"}],"termid":"MONDO:0100430","xrefs":{"Monarch":{"xref_id":"0100430"}}}


id: PBO:0065172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin 2","termid":"PBO:0065172"}


id: GO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of glucuronate to the xylan backbone of glucuronoxylan molecule.","definition_xrefs":["PMID:18980649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"glucuronoxylan glucuronosyltransferase activity","termid":"GO:0080116"}


id: PBO:0059367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 2","termid":"PBO:0059367"}


id: PR:P78970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ceramide synthase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase lag1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.09c","secondary_identifiers":["UniProtKB:P78970"],"synonyms":[{"name":"Spom972h-CERS1","type":"exact"},{"name":"longevity assurance factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"longevity assurance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78970"}


id: GO:0090020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter contributing to the formation of the posterior neural plate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in posterior neural plate formation (obsolete GO:0090020)","termid":"GO:0090020"}


id: GO:0035394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-X-C motif) ligand 9.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"regulation of CXCL9 production","type":"exact"},{"name":"regulation of MIG production","type":"exact"}],"termid":"GO:0035394"}


id: MONDO:0021025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cirrhosis, familial","termid":"MONDO:0007329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cirrhosis, familial, with antigenemia","secondary_identifiers":["OMIM:118900"],"synonyms":[{"name":"cirrhosis, familial","type":"related"}],"termid":"MONDO:0021025","xrefs":{"Monarch":{"xref_id":"0021025"}}}


id: PBO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 23","termid":"PBO:0043155"}


id: MONDO:0003000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A unique group of rare tumors of the central nervous system that affect mainly children and adolescents. Their morphologic and biologic profile corresponds to that of homologous germ cell tumors that arise in the gonads and in other extragonadal sites. Representative examples include: germinoma, embryonal carcinoma, yolk sac tumor, choriocarcinoma, and teratoma.","definition_xrefs":["NCIT:C5461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"},{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system germ cell tumor","secondary_identifiers":["UMLS:C1332880","DOID:4439","MEDGEN:232040"],"synonyms":[{"name":"CNS germ cell neoplasm","type":"exact"},{"name":"CNS germ cell tumor","type":"exact"},{"name":"CNS germ cell tumour","type":"exact"},{"name":"central nervous system germ cell neoplasm","type":"exact"},{"name":"central nervous system germ cell tumor","type":"exact"},{"name":"central nervous system rare germ cell tumor","type":"exact"},{"name":"central nervous system rare germ cell tumour","type":"exact"},{"name":"germ cell neoplasm of CNS","type":"exact"},{"name":"germ cell neoplasm of central nervous system","type":"exact"},{"name":"germ cell neoplasm of the CNS","type":"exact"},{"name":"germ cell neoplasm of the central nervous system","type":"exact"},{"name":"germ cell tumor of CNS","type":"exact"},{"name":"germ cell tumor of central nervous system","type":"exact"},{"name":"germ cell tumor of the CNS","type":"exact"},{"name":"germ cell tumor of the central nervous system","type":"exact"},{"name":"germ cell tumour of CNS","type":"exact"},{"name":"germ cell tumour of central nervous system","type":"exact"},{"name":"germ cell tumour of the CNS","type":"exact"},{"name":"germ cell tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0003000","xrefs":{"Monarch":{"xref_id":"0003000"}}}


id: GO:0090164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae that contributes to the establishment of epithelial cell polarity.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi ribbon formation","termid":"GO:0090161"},{"relation_name":"part_of","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"asymmetric Golgi ribbon formation","termid":"GO:0090164"}


id: GO:0010950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endopeptidase activity","termid":"GO:0010950"}


id: PR:O94549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1322.10 gene.","definition_xrefs":["UniProtKB:O94549","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0619 GPI-anchored membrane protein C1322.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.10","synonyms":[{"name":"Spom972h-SPCC1322.10","type":"exact"}],"termid":"PR:O94549"}


id: GO:0004127
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80180],"is_not":false,"summary":null,"term":"GO:0004127"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (d)CMP = ADP + (d)CDP.","definition_xrefs":["EC:2.7.4.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"(d)CMP kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ATP:CMP phosphotransferase activity","type":"related"},{"name":"CMP kinase activity","type":"narrow"},{"name":"CTP:CMP phosphotransferase activity","type":"related"},{"name":"cytidine monophosphate kinase activity","type":"related"},{"name":"dCMP kinase activity","type":"narrow"},{"name":"deoxycytidine monophosphokinase activity","type":"related"},{"name":"deoxycytidylate kinase activity","type":"broad"}],"termid":"GO:0004127","terms_by_termid":{"GO:0004127":null}}


id: GO:1903710
data:
  {"annotated_genes":["SJAG_02344","SJAG_02059","SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68512,110729,117160],"is_not":false,"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The process in which spermine is transported across a membrane.","definition_xrefs":["PMID:15637075","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermine transport","termid":"GO:0000296"},{"relation_name":"is_a","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"spermine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1903710","terms_by_termid":{"GO:1903710":null}}


id: PBO:0039322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALOX12 antisense RNA 1","termid":"PBO:0039322"}


id: PBO:0085431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; catalyzes uptake of polyamines at alkaline pH and excretion at acidic pH; during oxidative stress exports spermine, spermidine from the cell, which controls timing of expression of stress-responsive genes; phosphorylation enhances activity and sorting to the plasma membrane","termid":"PBO:0085431"}


id: MONDO:1012343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gluten-sensitive enteropathy, non-human animal","termid":"MONDO:1011664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluten-sensitive enteropathy, dog","secondary_identifiers":["OMIA:001261-9615"],"termid":"MONDO:1012343","xrefs":{"Monarch":{"xref_id":"1012343"}}}


id: PBO:0044190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin C","termid":"PBO:0044190"}


id: FYPO:0007806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0140656","PMID:33836577","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal endodeoxyribonuclease activator activity","termid":"FYPO:0007806"}


id: PBO:0088765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone, gankyrin","termid":"PBO:0088765"}


id: GO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamyl alcohol + NADP+ = cinnamaldehyde + NADPH + H+. Also acts on coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.","definition_xrefs":["EC:1.1.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cinnamyl-alcohol dehydrogenase activity","secondary_identifiers":["MetaCyc:CINNAMYL-ALCOHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"CAD activity","type":"broad"},{"name":"cinnamyl alcohol dehydrogenase activity","type":"related"},{"name":"cinnamyl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0045551"}


id: FYECO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were chilled by placing them on ice.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chilled cells","synonyms":[{"name":"cold","type":"related"},{"name":"ice","type":"related"}],"termid":"FYECO:0000202"}


id: GO:0102965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + 2 H+ + 2 NADPH = a long-chain primary fatty alcohol + CoA + 2 NADP+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:52716","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alcohol-forming long-chain fatty acyl-CoA reductase activity","secondary_identifiers":["EC:1.2.1.84","MetaCyc:RXN-9344"],"synonyms":[{"name":"alcohol-forming fatty acyl-CoA reductase activity","type":"broad"}],"termid":"GO:0102965"}


id: PBO:0090130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type zinc finger protein and glutamine sensor Pib2","termid":"PBO:0090130"}


id: PBO:0072552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase D4","termid":"PBO:0072552"}


id: PBO:0031315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_valproic_acid","termid":"PBO:0031315"}


id: GO:0043399
data:
  {"annotated_genes":["SJAG_05228"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58507],"is_not":false,"summary":null,"term":"GO:0043399"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphoribosyl group from 5'-phosphoribosyl-1'-pyrophosphate to position 64 of initiator tRNA.","definition_xrefs":["GOC:jl","PMID:7954819","PMID:22030622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0016740","GO:0016757","GO:0140101"],"is_obsolete":false,"name":"tRNA adenosine(64)-2'-O-ribosylphosphate transferase activity","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"initiator tRNA phosphoribosyl-transferase activity","type":"exact"},{"name":"tRNA A64-2'-O-ribosylphosphate transferase activity","type":"exact"}],"termid":"GO:0043399","terms_by_termid":{"GO:0043399":null}}


id: PBO:0086165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for sorting proteins to the vacuole; Mvp1p and Vps1p act in concert to promote membrane traffic to the vacuole; participates in transcription initiation and/or early elongation of specific genes; interacts with 'foot domain' of RNA polymerase II; deletion results in abnormal CTD-Ser5 phosphorylation of RNA polymerase II at specific promoter regions; protein abundance increases in response to DNA replication stress","termid":"PBO:0086165"}


id: GO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure. Somatic muscles are striated muscle structures that connect to the exoskeleton or cuticle.","definition_xrefs":["GOC:mtg_muscle","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle development","termid":"GO:0007525"}


id: MONDO:0019120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pili bifurcati is an uncommon transitory hair shaft dysplasia characterized by segmental duplication of the hair shaft: a ramification generates two parallel branches which fuse to form a single shaft again. Each branch is covered by its own cuticle.","definition_xrefs":["Orphanet:720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pili bifurcati","secondary_identifiers":["icd11.foundation:674923489","UMLS:C5574653","MEDGEN:1812698","GARD:18703","SCTID:717360009"],"termid":"MONDO:0019120","xrefs":{"Monarch":{"xref_id":"0019120"}}}


id: FYPO:0005313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which maintenance of mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Maintenance of mitotic sister chromatid cohesion is the process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the mitotic spindle, and congress to the metaphase plate.","definition_xrefs":["GO:0034088","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"normal maintenance of mitotic chromosome cohesion","type":"exact"},{"name":"normal maintenance of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal maintenance of sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005313"}


id: PBO:0012525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_division_of","termid":"PBO:0012525"}


id: GO:0051167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylulose 5-phosphate, a derivative of the ketopentose xylulose phosphorylated at the 5 carbon; it is an intermediate in the pentose phosphate pathway.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylulose 5-phosphate metabolic process","synonyms":[{"name":"D-xylulose 5-phosphate metabolic process","type":"exact"},{"name":"D-xylulose 5-phosphate metabolism","type":"exact"},{"name":"D-xylulose-5-phosphate metabolic process","type":"exact"},{"name":"D-xylulose-5-phosphate metabolism","type":"exact"},{"name":"xylulose 5-phosphate metabolism","type":"exact"},{"name":"xylulose-5-phosphate metabolic process","type":"exact"},{"name":"xylulose-5-phosphate metabolism","type":"exact"}],"termid":"GO:0051167"}


id: MONDO:0007640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare progressive autosomal dominant macular dystrophy, presenting between the third and sixth decades of life, characterized by retinal atrophy and retinal detachment and leading to loss of central vision, then peripheral vision, and eventually blindness.","definition_xrefs":["Orphanet:59181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Sorsby fundus dystrophy","secondary_identifiers":["DOID:0090114","SCTID:193410003","icd11.foundation:796458172","MEDGEN:338164","MESH:C564992","UMLS:C1850938","GARD:16480","OMIM:136900"],"synonyms":[{"name":"SFD","type":"exact"},{"name":"Sorsby fundus dystrophy","type":"exact"},{"name":"Sorsby pseudoinflammatory fundus dystrophy","type":"related"},{"name":"Sorsby's fundus dystrophy","type":"exact"},{"name":"Sorsby's pseudoinflammatory macular dystrophy","type":"related"},{"name":"fundus dystrophy, pseudoinflammatory, of Sorsby","type":"related"},{"name":"hemorrhagic macular dystrophy","type":"exact"},{"name":"macular dystrophy, hemorrhagic","type":"related"},{"name":"pseudoinflammatory fundus dystrophy of Sorsby","type":"exact"}],"termid":"MONDO:0007640","xrefs":{"Monarch":{"xref_id":"0007640"}}}


id: PBO:0056512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBNL1 antisense RNA 1","termid":"PBO:0056512"}


id: MONDO:0008948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebrotendinous xanthomatosis (CTX) is an anomaly of bile acid synthesis characterized by neonatal cholestasis, childhood-onset cataract, adolescent to young adult-onset tendon xanthomata, and brain xanthomata with adult-onset neurologic dysfunction.","definition_xrefs":["Orphanet:909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthomatosis","termid":"MONDO:0002615"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"inborn disorder of bile acid synthesis","termid":"MONDO:0019218"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"},{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"},{"relation_name":"is_a","term_name":"cholesterol catabolic process disease","termid":"MONDO:0045016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002039","MONDO:0006025","MONDO:0005328","MONDO:0005244","MONDO:0005559","MONDO:0002525"],"is_obsolete":false,"name":"cerebrotendinous xanthomatosis","secondary_identifiers":["NANDO:1200856","NORD:915","SCTID:63246000","GARD:5622","UMLS:C0238052","DOID:4810","icd11.foundation:1556875179","OMIM:213700","MESH:D019294","MEDGEN:116041","NCIT:C84628"],"synonyms":[{"name":"CTX","type":"exact"},{"name":"CTx","type":"exact"},{"name":"cerebral cholesterinosis","type":"related"},{"name":"cerebrotendinous xanthomatosis","type":"exact"},{"name":"cholestanol storage disease","type":"exact"},{"name":"sterol 27-hydroxylase deficiency","type":"exact"}],"termid":"MONDO:0008948","xrefs":{"Monarch":{"xref_id":"0008948"}}}


id: PBO:0067148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 198, pseudogene","termid":"PBO:0067148"}


id: PBO:0052314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA00895L pseudogene 1","termid":"PBO:0052314"}


id: PBO:0067403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 510, pseudogene","termid":"PBO:0067403"}


id: MONDO:0007988
data:
  {"annotated_genes":["SJAG_05245"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054593"}]},"cv_name":"mondo","definition":"Autosomal dominant form of microcephaly (disease).","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"isolated congenital microcephaly","termid":"MONDO:0016056"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320","MONDO:0700092"],"is_obsolete":false,"name":"autosomal dominant primary microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:2514","DOID:14725","OMIM:156580","GARD:3605","MEDGEN:66319","icd11.foundation:774437947","UMLS:C0220693","MESH:C537323"],"synonyms":[{"name":"autosomal dominant microcephaly","type":"related"},{"name":"autosomal dominant primary microcephaly","type":"exact"},{"name":"microcephaly (disease), autosomal dominant","type":"exact"},{"name":"microcephaly autosomal dominant","type":"related"},{"name":"microcephaly with autosomal dominant inheritance","type":"related"},{"name":"microcephaly, autosomal dominant","type":"related"}],"termid":"MONDO:0007988","terms_by_termid":{"MONDO:0054593":null},"xrefs":{"Monarch":{"xref_id":"0007988"}}}


id: FYPO:0008058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed  ability of a polyA robonuclease to catalyze consecutive reactions without releasing the substrate (i.e. template) is abnormal.","definition_xrefs":["PMID:19307292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal enzyme processivity","termid":"FYPO:0008057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased polyA ribonuclease processivity","termid":"FYPO:0008058"}


id: FYPO:0002733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and tapered, i.e. tapers at one end to a diameter smaller than the other, undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated tapered cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated bottle-shaped cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated bottle/skittle cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated skittle-shaped cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, elongated tapered cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated tapered cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated tapered cell","type":"exact"}],"termid":"FYPO:0002733"}


id: MOD:00248
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-phenylalanine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00248"}


id: FYPO:0005135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"},{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to linear element","synonyms":[{"name":"normal protein localisation to linear element","type":"exact"}],"termid":"FYPO:0005135"}


id: MONDO:1011117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, sheep","secondary_identifiers":["OMIA:000243-9940"],"termid":"MONDO:1011117","xrefs":{"Monarch":{"xref_id":"1011117"}}}


id: GO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. The larva is the early, immature form of an that at birth or hatching is fundamentally unlike its parent and must metamorphose before assuming the adult characters.","definition_xrefs":["GOC:jid","ISBN:0877795088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval development","termid":"GO:0002164"}


id: GO:2000703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040037"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000702"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"negative regulation of FGF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of FGF receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of FGFR signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of fibroblast growth factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of fibroblast growth factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000703"}


id: PBO:0017624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Avt3","termid":"PBO:0017624"}


id: PBO:0083143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 5' end of ORF YMR317W","termid":"PBO:0083143"}


id: PBO:0074197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 7","termid":"PBO:0074197"}


id: GO:0070971
data:
  {"annotated_genes":["SJAG_00072","SJAG_05345","SJAG_00906","SJAG_05344","SJAG_03558","SJAG_02349","SJAG_03153","SJAG_02539","SJAG_00284"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71029,71089,74505,74860,75276,76246,76788,77813,78134],"is_not":false,"summary":null,"term":"GO:0070971"}]},"cv_name":"cellular_component","definition":"An endoplasmic reticulum part at which COPII-coated vesicles are produced.","definition_xrefs":["PMID:16957052","NIF_Subcellular:sao124393998","PMID:15623529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00906":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"endoplasmic reticulum exit site","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ER exit site","type":"exact"},{"name":"transitional ER","type":"exact"}],"termid":"GO:0070971","terms_by_termid":{"GO:0070971":null}}


id: PR:Q10198
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein NDC80 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03670","PRO:DNx","PANTHER:PTHR10643:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein ndc80 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.03","secondary_identifiers":["UniProtKB:Q10198"],"synonyms":[{"name":"NMS complex subunit ndc80 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NDC80","type":"exact"}],"termid":"PR:Q10198"}


id: MONDO:0012594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement factor I deficiency","secondary_identifiers":["MEDGEN:483045","DOID:0050419","Orphanet:200418","NANDO:2200790","MESH:C572568","NANDO:2200798","OMIM:610984","GARD:17098","UMLS:C3463916"],"synonyms":[{"name":"C3 inactivator deficiency","type":"exact"},{"name":"CFID","type":"related"},{"name":"complement Factor 1 deficiency","type":"related"},{"name":"complement component 3 inactivator deficiency","type":"exact"},{"name":"complement factor I deficiency","type":"exact"},{"name":"immunodeficiency with factor I anomaly","type":"related"}],"termid":"MONDO:0012594","xrefs":{"Monarch":{"xref_id":"0012594"}}}


id: GO:0007081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic sister-chromatid adhesion release (obsolete GO:0007081)","synonyms":[{"name":"mitotic sister-chromatid adhesion release","type":"exact"}],"termid":"GO:0007081"}


id: MONDO:0021159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An salpingitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"},{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal salpingitis","secondary_identifiers":["MEDGEN:574651","SCTID:237038001","UMLS:C0341811"],"synonyms":[{"name":"Neisseria gonorrhoeae caused salpingitis","type":"exact"},{"name":"Neisseria gonorrhoeae salpingitis","type":"exact"}],"termid":"MONDO:0021159","xrefs":{"Monarch":{"xref_id":"0021159"}}}


id: PBO:0074319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 9","termid":"PBO:0074319"}


id: PBO:0002619
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.4","termid":"PBO:0002619"}


id: PR:Q9P380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide transporter ptr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.04c","synonyms":[{"name":"Spom972h-ptr2","type":"exact"},{"name":"peptide permease ptr2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P380"}


id: FYPO:0002781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to nitric oxide. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription during cellular response to nitric oxide","synonyms":[{"name":"increased transcription during cellular response to NO during vegetative growth","type":"exact"},{"name":"increased transcription during cellular response to nitric oxide during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to nitric oxide during vegetative growth","type":"exact"},{"name":"increased transcription during cellular response to nitric oxide stress","type":"related"}],"termid":"FYPO:0002781"}


id: SO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a region that is bounded either side by a particular kind of region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanked","termid":"SO:0000357"}


id: GO:1902986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lysine biosynthetic process via aminoadipic acid.","definition_xrefs":["PMID:8590464","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"lysine biosynthetic process via aminoadipic acid","termid":"GO:0019878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of lysine biosynthetic process via aminoadipic acid","synonyms":[{"name":"regulation of lysine anabolism via aminoadipic acid","type":"exact"},{"name":"regulation of lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"regulation of lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"regulation of lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"regulation of lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"regulation of lysine formation via aminoadipic acid","type":"exact"},{"name":"regulation of lysine synthesis via aminoadipic acid","type":"exact"}],"termid":"GO:1902986"}


id: PBO:0027157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_arginine_level","termid":"PBO:0027157"}


id: PBO:0027762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027762"}


id: FYPO:0008155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which regulatory lncRNA 3' end processing is abnormal.","definition_xrefs":["PMID:32415063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulatory lncRNA 3'-end processing","termid":"FYPO:0008155"}


id: PBO:0080778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 9","termid":"PBO:0080778"}


id: MONDO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine exophthalmos","termid":"MONDO:0001509"},{"relation_name":"is_a","term_name":"facial paralysis","termid":"MONDO:0001835"},{"relation_name":"is_a","term_name":"ophthalmoplegia","termid":"MONDO:0003425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exophthalmic ophthalmoplegia","secondary_identifiers":["ICD9:376.22","SCTID:69763009","UMLS:C0152135","MEDGEN:508900","DOID:13135"],"termid":"MONDO:0001643","xrefs":{"Monarch":{"xref_id":"0001643"}}}


id: PBO:0090308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-phosphate mutase","termid":"PBO:0090308"}


id: PBO:0048442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 5","termid":"PBO:0048442"}


id: PBO:0071884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 22","termid":"PBO:0071884"}


id: MONDO:0020260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myasthenic syndrome with eye involvement (obsolete MONDO:0020260)","secondary_identifiers":["Orphanet:98690"],"termid":"MONDO:0020260","xrefs":{"Monarch":{"xref_id":"0020260"}}}


id: PBO:0039200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 3","termid":"PBO:0039200"}


id: GO:0044403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by gene products in an organism that enable the organism to engage in a symbiotic relationship, a more or less intimate association, with another organism. The various forms of symbiosis include parasitism, in which the association is disadvantageous or destructive to one of the organisms; mutualism, in which the association is advantageous, or often necessary to one or both and not harmful to either; and commensalism, in which one member of the association benefits while the other is not affected. However, mutualism, parasitism, and commensalism are often not discrete categories of interactions and should rather be perceived as a continuum of interaction ranging from parasitism to mutualism. In fact, the direction of a symbiotic interaction can change during the lifetime of the symbionts due to developmental changes as well as changes in the biotic/abiotic environment in which the interaction occurs. Microscopic symbionts are often referred to as endosymbionts.","definition_xrefs":["GOC:cc","PMID:31257129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interspecies interaction between organisms","termid":"GO:0044419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in symbiotic interaction","secondary_identifiers":["GO:0072519","GO:0044404","GO:0043298","GO:0085031"],"synonyms":[{"name":"commensalism","type":"narrow"},{"name":"host-pathogen interaction","type":"narrow"},{"name":"parasitism","type":"narrow"},{"name":"symbiosis","type":"related"},{"name":"symbiosis, encompassing mutualism through parasitism","type":"related"},{"name":"symbiotic interaction","type":"related"},{"name":"symbiotic interaction between host and organism","type":"related"},{"name":"symbiotic interaction between organisms","type":"related"},{"name":"symbiotic interaction between species","type":"related"},{"name":"symbiotic process","type":"related"}],"termid":"GO:0044403"}


id: PBO:0053871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1147","termid":"PBO:0053871"}


id: GO:1905925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["GO_REF:0000058","PMID:15684033","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invadopodium assembly (obsolete GO:1905925)","synonyms":[{"name":"down regulation of invadopodium assembly","type":"exact"},{"name":"down regulation of invadopodium formation","type":"exact"},{"name":"down-regulation of invadopodium assembly","type":"exact"},{"name":"down-regulation of invadopodium formation","type":"exact"},{"name":"downregulation of invadopodium assembly","type":"exact"},{"name":"downregulation of invadopodium formation","type":"exact"},{"name":"inhibition of invadopodium assembly","type":"narrow"},{"name":"inhibition of invadopodium formation","type":"narrow"},{"name":"negative regulation of invadopodium formation","type":"exact"}],"termid":"GO:1905925"}


id: MONDO:0043994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the gallbladder.","definition_xrefs":["NCIT:C35152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute cholangitis","termid":"MONDO:0001930"},{"relation_name":"is_a","term_name":"cholecystitis","termid":"MONDO:0002155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"acute cholecystitis","secondary_identifiers":["MEDGEN:57682","MESH:D041881","icd11.foundation:2071113448","SCTID:65275009","UMLS:C0149520"],"synonyms":[{"name":"acute cholecystitis","type":"exact"}],"termid":"MONDO:0043994","xrefs":{"Monarch":{"xref_id":"0043994"}}}


id: PBO:0111931
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3/PP2B/calcineurin subfamily","termid":"PBO:0111931"}


id: MONDO:0011422
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85247],"is_not":false,"summary":null,"term":"MONDO:0011422"}]},"cv_name":"mondo","definition":"Autosomal recessive proximal renal tubular acidosis (AR pRTA) is a rare form of proximal renal tubular acidosis (pRTA) characterized by an isolated defect in the proximal tubule leading to the decreased reabsorption of bicarbonate and consequentially to urinary bicarbonate wastage along with additional characteristic clinical features.","definition_xrefs":["Orphanet:93607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"proximal renal tubular acidosis","termid":"MONDO:0008369"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive proximal renal tubular acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16826","MEDGEN:370883","OMIM:604278","MESH:C567038","UMLS:C1970309"],"synonyms":[{"name":"AR pRTA","type":"exact"},{"name":"RTA, proximal, autosomal recessive","type":"related"},{"name":"proximal renal tubular acidosis with ocular abnormalities and intellectual disability","type":"exact"},{"name":"proximal renal tubular acidosis, autosomal recessive","type":"exact"},{"name":"renal tubular acidosis, proximal, with ocular abnormalities","type":"exact"},{"name":"renal tubular acidosis, proximal, with ocular abnormalities and intellectual disability","type":"related"},{"name":"renal tubular acidosis, proximal, with ocular abnormalities and mental retardation","type":"related"}],"termid":"MONDO:0011422","terms_by_termid":{"MONDO:0011422":null},"xrefs":{"Monarch":{"xref_id":"0011422"}}}


id: PBO:0083791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in vesicle-mediated ER to Golgi transport; binds membranes and functions during vesicle docking to the Golgi; required for assembly of the ER-to-Golgi SNARE complex","termid":"PBO:0083791"}


id: PBO:0069905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1196, pseudogene","termid":"PBO:0069905"}


id: RO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) directly postively regulates process(P2) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P1 directly positively regulates P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"positively_regulates","termid":"RO:0002213"},{"relation_name":"is_a","term_name":"directly_regulates","termid":"RO:0002578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulates","termid":"RO:0002629"}


id: PBO:0068463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 40, pseudogene","termid":"PBO:0068463"}


id: GO:1900581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (17Z)-protosta-17(20),24-dien-3beta-ol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"tetracyclic triterpenoid biosynthetic process","termid":"GO:0010686"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolic process","termid":"GO:1900579"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(17Z)-protosta-17(20),24-dien-3beta-ol biosynthetic process","synonyms":[{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol anabolism","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol biosynthesis","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol formation","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol synthesis","type":"exact"}],"termid":"GO:1900581"}


id: GO:0090085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein deubiquitination","termid":"GO:0090085"}


id: MOD:01222
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-formyl-L-serine.","definition_xrefs":["Unimod:122#S","PubMed:15627961","PubMed:15799070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-formyl-L-serine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01222"}


id: GO:0034664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located in the endoplasmic reticulum (ER) and is formed by the association of an immunoglobulin heavy chain with the proteins of the ER chaperone complex; the latter include BiP, GRP94; CaBP1, protein disulfide isomerase (PDI), ERdj3, cyclophilin B, ERp72, GRP170, UDP-glucosyltransferase, and SDF2-L1.","definition_xrefs":["PMID:12475965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Ig heavy chain-bound endoplasmic reticulum chaperone complex","synonyms":[{"name":"Ig heavy chain-bound ER chaperone complex","type":"exact"},{"name":"immunoglobulin heavy chain-bound endoplasmic reticulum chaperone complex","type":"exact"}],"termid":"GO:0034664"}


id: PBO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 8, envelope","termid":"PBO:0046554"}


id: MONDO:0019316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maculopapular cutaneous mastocytosis (MCM) is a form of cutaneous mastocytosis (CM) characterized by the presence of multiple hyperpigmented macules, papules or nodules associated with abnormal accumulation of mast cells in the skin.","definition_xrefs":["Orphanet:79457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mastocytosis","termid":"MONDO:0019023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"maculopapular cutaneous mastocytosis","secondary_identifiers":["icd11.foundation:245322245","SCTID:78745000","MedDRA:10046752","ICD9:708.8","DOID:12309","EFO:1001229","MEDGEN:22588","NCIT:C3433","UMLS:C0042111","ICDO:9740/1","GARD:16723"],"synonyms":[{"name":"Paucicellular mastocytosis","type":"related"},{"name":"UP/MPCM","type":"exact"},{"name":"telangiectasia macularis eruptive perstans","type":"related"},{"name":"telangiectatic cutaneous mastocytosis","type":"related"},{"name":"urticaria pigmentosa","type":"exact"},{"name":"urticaria pigmentosa/maculopapular cutaneous mastocytosis","type":"exact"}],"termid":"MONDO:0019316","xrefs":{"Monarch":{"xref_id":"0019316"}}}


id: PR:O13826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rfp1 gene.","definition_xrefs":["UniProtKB:O13826","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase complex slx8-rfp subunit rfp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.10","synonyms":[{"name":"RING finger protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rfp1","type":"exact"},{"name":"meiotically up-regulated gene 140 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13826"}


id: PBO:0050643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 8, pseudogene","termid":"PBO:0050643"}


id: MONDO:0018466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary late onset Parkinson disease (obsolete MONDO:0018466)","termid":"MONDO:0018466","xrefs":{"Monarch":{"xref_id":"0018466"}}}


id: PR:Q9P3U1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ELAV-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01452","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C328.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.05","secondary_identifiers":["UniProtKB:Q9P3U1"],"synonyms":[{"name":"Spom972h-ELAVL2","type":"exact"}],"termid":"PR:Q9P3U1"}


id: PBO:0070038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1335, pseudogene","termid":"PBO:0070038"}


id: MONDO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 93","secondary_identifiers":["UMLS:C5676970","MEDGEN:1810905","OMIM:619845"],"synonyms":[{"name":"RP93","type":"exact"},{"name":"retinitis pigmentosa 93","type":"exact"}],"termid":"MONDO:0030797","xrefs":{"Monarch":{"xref_id":"0030797"}}}


id: MONDO:0016383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrogenic diabetes insipidus (NDI) is characterized by polyuria with polydipsia, recurrent bouts of fever, constipation, and acute hypernatremic dehydration after birth that may cause neurological sequelae. Polyuria may exceed 10 liters in children.","definition_xrefs":["Orphanet:223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impaired renal function disease","termid":"MONDO:0001343"},{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic diabetes insipidus","secondary_identifiers":["NORD:1497","ICD10CM:N25.1","GARD:7178","ICD9:588.1","UMLS:C0162283","MESH:D018500","MedDRA:10029147","NCIT:C84919","DOID:12387","SCTID:111395007","icd11.foundation:1417669099","MEDGEN:57876","NANDO:2200326","NANDO:1200742"],"synonyms":[{"name":"ADH resistant diabetes insipidus","type":"related"},{"name":"diabetes insipidus nephrogenic","type":"related"},{"name":"diabetes insipidus nephrogenic X-linked","type":"related"},{"name":"diabetes insipidus nephrogenic type 1","type":"related"},{"name":"vasopressin-resistant diabetes insipidus","type":"related"}],"termid":"MONDO:0016383","xrefs":{"Monarch":{"xref_id":"0016383"}}}


id: MONDO:0010125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Upper limb defect - eye and ear abnormalities syndrome associates upper limb defects (hypoplastic thumb with hypoplasia of the metacarpal bone and phalanges and delayed bone maturation), developmental delay, central hearing loss, unilateral poorly developed antihelix, bilateral choroid coloboma and growth retardation.","definition_xrefs":["Orphanet:2489"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upper limb defect-eye and ear abnormalities syndrome","secondary_identifiers":["GARD:16602","UMLS:C1848816","OMIM:274205","MEDGEN:376448","MESH:C564769"],"synonyms":[{"name":"thumb, hypoplastic, with choroid coloboma, poorly developed antihelix, and deafness","type":"related"}],"termid":"MONDO:0010125","xrefs":{"Monarch":{"xref_id":"0010125"}}}


id: GO:0090459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of aspartate within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular aspartate homeostasis","synonyms":[{"name":"aspartate homeostasis","type":"exact"},{"name":"cellular aspartate homeostasis","type":"exact"}],"termid":"GO:0090459"}


id: BFO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a core relation that holds between a part and its whole","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"overlaps","termid":"_global:overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of","secondary_identifiers":["BFO:0000050","OBO_REL:part_of"],"synonyms":[{"name":"part of","type":"exact"}],"termid":"BFO:0000050"}


id: MONDO:1010861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysosomal storage disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, domestic cat","secondary_identifiers":["OMIA:000616-9685"],"termid":"MONDO:1010861","xrefs":{"Monarch":{"xref_id":"1010861"}}}


id: PBO:0074690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 69","termid":"PBO:0074690"}


id: GO:0033191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-pyrone + oxalacetate = macrophomate.","definition_xrefs":["PMID:10984474","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0003824","GO:0016744","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"macrophomate synthase activity","termid":"GO:0033191"}


id: PBO:0077614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 5","termid":"PBO:0077614"}


id: PBO:0070776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 6","termid":"PBO:0070776"}


id: PBO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 6, pseudogene","termid":"PBO:0050914"}


id: GO:0032156
data:
  {"annotated_genes":["SJAG_03688","SJAG_00663","SJAG_04470","SJAG_03843","SJAG_00118","SJAG_01658","SJAG_04566","SJAG_01769","SJAG_03703","SJAG_02645","SJAG_01277","SJAG_04703","SJAG_03374","SJAG_04375"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115775,105805,94258,99895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032175"},{"annotations":[118444,100743,117682,112572,97592,107753,101554,103704,97669,99896],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0036391"},{"annotations":[99897,115776,105806,94259],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032152"},{"annotations":[97672,103707,100746,99900],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032151"},{"annotations":[115778,94262,99902,105809],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032169"},{"annotations":[75143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005940"},{"annotations":[100748,101555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032176"}]},"cv_name":"cellular_component","definition":"The part of the cytoskeleton (the internal framework of a cell) composed of septins and associated proteins. Includes septin cytoskeleton-associated complexes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_01769":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_03843":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin cytoskeleton","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032156","terms_by_termid":{"GO:0005940":null,"GO:0032151":null,"GO:0032152":null,"GO:0032169":null,"GO:0032175":null,"GO:0032176":null,"GO:0036391":null}}


id: GO:0071446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salicylic acid","termid":"GO:0009751"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to salicylic acid stimulus","synonyms":[{"name":"cellular response to salicylate stimulus","type":"exact"}],"termid":"GO:0071446"}


id: PBO:0082737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition","termid":"PBO:0082737"}


id: PBO:0070804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 34","termid":"PBO:0070804"}


id: PBO:0029424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_palmitoylation","termid":"PBO:0029424"}


id: FYPO:0000526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pexophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased peroxisome degradation","synonyms":[{"name":"decreased pexophagy","type":"exact"},{"name":"pexophagy: decreased","type":"related"},{"name":"reduced peroxisome degradation","type":"exact"}],"termid":"FYPO:0000526"}


id: PBO:0005697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex associated protein","termid":"PBO:0005697"}


id: PBO:0056161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroH2A.2 histone","termid":"PBO:0056161"}


id: GO:0004783
data:
  {"annotated_genes":["SJAG_05027","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69830,78064],"is_not":false,"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 NADP+ + 3 H2O = sulfite + 3 NADPH + 3 H+.","definition_xrefs":["RHEA:13801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite reductase activity","termid":"GO:0016002"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sulfite reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.8.1.2","MetaCyc:SULFITE-REDUCT-RXN"],"synonyms":[{"name":"H2S-NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent sulfite reductase activity","type":"related"},{"name":"NADPH-sulfite reductase activity","type":"related"},{"name":"NADPH:sulfite reductase flavoprotein","type":"related"},{"name":"hydrogen-sulfide:NADP+ oxidoreductase activity","type":"related"},{"name":"sulfite (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"sulphite reductase (NADPH) activity","type":"exact"}],"termid":"GO:0004783","terms_by_termid":{"GO:0004783":null}}


id: PBO:0028442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_double-strand_break_formation_at_mating-type_locus","termid":"PBO:0028442"}


id: PR:O94729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tti2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.17c","synonyms":[{"name":"Spom972h-tti2","type":"exact"}],"termid":"PR:O94729"}


id: PBO:0091983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family heat shock protein Ssa2","termid":"PBO:0091983"}


id: GO:1902553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of catalase activity.","definition_xrefs":["GOC:TermGenie","PMID:24285797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalase activity","termid":"GO:1902551"},{"relation_name":"is_a","term_name":"positive regulation of peroxidase activity","termid":"GO:2000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalase activity","synonyms":[{"name":"activation of CAT","type":"related"},{"name":"activation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"activation of caperase activity","type":"narrow"},{"name":"activation of catalase activity","type":"narrow"},{"name":"activation of catalase reaction","type":"narrow"},{"name":"activation of catalase-peroxidase activity","type":"narrow"},{"name":"activation of equilase activity","type":"narrow"},{"name":"activation of haem catalase activity","type":"narrow"},{"name":"activation of heme catalase activity","type":"narrow"},{"name":"activation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"activation of manganese catalase activity","type":"narrow"},{"name":"activation of optidase activity","type":"narrow"},{"name":"positive regulation of CAT","type":"related"},{"name":"positive regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"positive regulation of caperase activity","type":"exact"},{"name":"positive regulation of catalase reaction","type":"exact"},{"name":"positive regulation of catalase-peroxidase activity","type":"exact"},{"name":"positive regulation of equilase activity","type":"exact"},{"name":"positive regulation of haem catalase activity","type":"narrow"},{"name":"positive regulation of heme catalase activity","type":"narrow"},{"name":"positive regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of manganese catalase activity","type":"narrow"},{"name":"positive regulation of optidase activity","type":"exact"},{"name":"up regulation of CAT","type":"related"},{"name":"up regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"up regulation of caperase activity","type":"exact"},{"name":"up regulation of catalase activity","type":"exact"},{"name":"up regulation of catalase reaction","type":"exact"},{"name":"up regulation of catalase-peroxidase activity","type":"exact"},{"name":"up regulation of equilase activity","type":"exact"},{"name":"up regulation of haem catalase activity","type":"narrow"},{"name":"up regulation of heme catalase activity","type":"narrow"},{"name":"up regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up regulation of manganese catalase activity","type":"narrow"},{"name":"up regulation of optidase activity","type":"exact"},{"name":"up-regulation of CAT","type":"related"},{"name":"up-regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"up-regulation of caperase activity","type":"exact"},{"name":"up-regulation of catalase activity","type":"exact"},{"name":"up-regulation of catalase reaction","type":"exact"},{"name":"up-regulation of catalase-peroxidase activity","type":"exact"},{"name":"up-regulation of equilase activity","type":"exact"},{"name":"up-regulation of haem catalase activity","type":"narrow"},{"name":"up-regulation of heme catalase activity","type":"narrow"},{"name":"up-regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up-regulation of manganese catalase activity","type":"narrow"},{"name":"up-regulation of optidase activity","type":"exact"},{"name":"upregulation of CAT","type":"related"},{"name":"upregulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"upregulation of caperase activity","type":"exact"},{"name":"upregulation of catalase activity","type":"exact"},{"name":"upregulation of catalase reaction","type":"exact"},{"name":"upregulation of catalase-peroxidase activity","type":"exact"},{"name":"upregulation of equilase activity","type":"exact"},{"name":"upregulation of haem catalase activity","type":"narrow"},{"name":"upregulation of heme catalase activity","type":"narrow"},{"name":"upregulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"upregulation of manganese catalase activity","type":"narrow"},{"name":"upregulation of optidase activity","type":"exact"}],"termid":"GO:1902553"}


id: PBO:0072952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase cancer associated transcript 8","termid":"PBO:0072952"}


id: PBO:0072764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A15A (pseudogene)","termid":"PBO:0072764"}


id: PBO:0079631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 1","termid":"PBO:0079631"}


id: MONDO:0007261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carabelli anomaly of maxillary molar teeth","secondary_identifiers":["UMLS:C1861897","MEDGEN:396243","OMIM:114700","MESH:C566175"],"synonyms":[{"name":"Carabelli anomaly of maxillary molar teeth","type":"exact"}],"termid":"MONDO:0007261","xrefs":{"Monarch":{"xref_id":"0007261"}}}


id: GO:0034217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ascospore wall chitin biosynthetic process (obsolete GO:0034217)","synonyms":[{"name":"ascospore wall chitin anabolism","type":"exact"},{"name":"ascospore wall chitin biosynthesis","type":"exact"},{"name":"ascospore wall chitin formation","type":"exact"},{"name":"ascospore wall chitin synthesis","type":"exact"}],"termid":"GO:0034217"}


id: PBO:0067830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 132","termid":"PBO:0067830"}


id: FYPO:0004940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chloroacetaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on chloroacetaldehyde","synonyms":[{"name":"normal cell population growth in presence of chloroacetaldehyde","type":"exact"},{"name":"normal cell population growth on CAA","type":"exact"},{"name":"normal cell population growth on chloroacetaldehyde","type":"exact"},{"name":"normal cellular response to chloroacetaldehyde","type":"related"},{"name":"normal vegetative cell population growth on chloroacetaldehyde","type":"exact"}],"termid":"FYPO:0004940"}


id: MONDO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to gain feedback about one's own condition or impairments.","definition_xrefs":["DOID:0060133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anosognosia","secondary_identifiers":["icd11.foundation:833222383","MEDGEN:536043","UMLS:C0234507"],"termid":"MONDO:0000663","xrefs":{"Monarch":{"xref_id":"0000663"}}}


id: GO:0062136
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane protein complex capable of low-density lipoprotein particle receptor activity. It may also bind xenobiotic toxins and deliver them into the cell via endocytosis. While most substrates get degraded via the endosome the receptor is recycled to the plasma membrane. It may also act as a transducer of intracellular signal pathways and often acts in corporation with other cell-surface receptors.","definition_xrefs":["PMID:26005850","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor complex","termid":"GO:0062137"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"low-density lipoprotein receptor complex","synonyms":[{"name":"LDL receptor complex","type":"exact"},{"name":"LDLR complex","type":"exact"},{"name":"low-density lipoprotein particle receptor complex","type":"exact"}],"termid":"GO:0062136"}


id: MONDO:0968945
data:
  {"annotated_genes":["SJAG_01477"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86916],"is_not":false,"summary":null,"term":"MONDO:0968945"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with language impairment, autism, and attention deficit-hyperactivity disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5935603","MEDGEN:1854977","OMIM:620782"],"termid":"MONDO:0968945","terms_by_termid":{"MONDO:0968945":null},"xrefs":{"Monarch":{"xref_id":"0968945"}}}


id: PATO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"growth rate","termid":"PATO:0001492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic growth","termid":"PATO:0001493"}


id: GO:0021766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the hippocampus over time from its initial formation until its mature state.","definition_xrefs":["GOC:dgh","UBERON:0002421","GOC:jid","GO_REF:0000021","GOC:cls","ISBN:0878937420","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pallium development","termid":"GO:0021543"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hippocampus development","synonyms":[{"name":"hippocampal formation development","type":"exact"}],"termid":"GO:0021766"}


id: GO:0090588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylmuramate (out) = protein cysteine + N-acetylmuramate-6-phosphate (in).","definition_xrefs":["PMID:15060041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity","termid":"GO:0090588"}


id: PBO:0052508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 22","termid":"PBO:0052508"}


id: PBO:0043859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRADD antisense RNA 1","termid":"PBO:0043859"}


id: PBO:0083062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoyl transsuccinylase; component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes the oxidative decarboxylation of alpha-ketoglutarate to succinyl-CoA in the TCA cycle; phosphorylated","termid":"PBO:0083062"}


id: GO:0034307
data:
  {"annotated_genes":["SJAG_04853","SJAG_04140","SJAG_02169","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91946],"is_not":false,"summary":null,"term":"GO:0034307"},{"annotations":[110996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[102079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ascospore formation. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0030437","GO:0008150"],"is_obsolete":false,"name":"regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPKKK cascade during sporulation","type":"related"}],"termid":"GO:0034307","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0067676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 861, pseudogene","termid":"PBO:0067676"}


id: PBO:0004581
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe GlycoProtease","termid":"PBO:0004581"}


id: PBO:0044599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 7","termid":"PBO:0044599"}


id: PBO:0029952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_sister_chromatid_separation","termid":"PBO:0029952"}


id: MONDO:0011739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the PALLD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 1","secondary_identifiers":["UMLS:C1847351","MEDGEN:339739","OMIM:606856"],"synonyms":[{"name":"PALLD familial pancreatic carcinoma","type":"exact"},{"name":"Pnca1","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in PALLD","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 1","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to pancreatic cancer 1","type":"related"}],"termid":"MONDO:0011739","xrefs":{"Monarch":{"xref_id":"0011739"}}}


id: MONDO:0020027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare allergic hypersensitivity disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare allergic disease (obsolete MONDO:0020027)","secondary_identifiers":["Orphanet:98050"],"synonyms":[{"name":"rare allergic disease","type":"exact"},{"name":"rare allergic hypersensitivity disease","type":"exact"},{"name":"rare allergy","type":"exact"}],"termid":"MONDO:0020027","xrefs":{"Monarch":{"xref_id":"0020027"}}}


id: GO:1905829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["PMID:12432938","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of prostaglandin catabolic process","termid":"GO:1905828"},{"relation_name":"negatively_regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of prostaglandin catabolic process","synonyms":[{"name":"down regulation of prostaglandin breakdown","type":"exact"},{"name":"down regulation of prostaglandin catabolic process","type":"exact"},{"name":"down regulation of prostaglandin catabolism","type":"exact"},{"name":"down regulation of prostaglandin degradation","type":"exact"},{"name":"down-regulation of prostaglandin breakdown","type":"exact"},{"name":"down-regulation of prostaglandin catabolic process","type":"exact"},{"name":"down-regulation of prostaglandin catabolism","type":"exact"},{"name":"down-regulation of prostaglandin degradation","type":"exact"},{"name":"downregulation of prostaglandin breakdown","type":"exact"},{"name":"downregulation of prostaglandin catabolic process","type":"exact"},{"name":"downregulation of prostaglandin catabolism","type":"exact"},{"name":"downregulation of prostaglandin degradation","type":"exact"},{"name":"inhibition of prostaglandin breakdown","type":"narrow"},{"name":"inhibition of prostaglandin catabolic process","type":"narrow"},{"name":"inhibition of prostaglandin catabolism","type":"narrow"},{"name":"inhibition of prostaglandin degradation","type":"narrow"},{"name":"negative regulation of prostaglandin breakdown","type":"exact"},{"name":"negative regulation of prostaglandin catabolism","type":"exact"},{"name":"negative regulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905829"}


id: PBO:0040829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 5","termid":"PBO:0040829"}


id: PBO:0039577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 6","termid":"PBO:0039577"}


id: GO:0000977
data:
  {"annotated_genes":["SJAG_04009","SJAG_01062","SJAG_02052","SJAG_04388","SJAG_02730","SJAG_00741","SJAG_00266","SJAG_00802","SJAG_05006","SJAG_01930","SJAG_03484","SJAG_04381","SJAG_01441","SJAG_00979","SJAG_03911","SJAG_02752","SJAG_03241","SJAG_03346","SJAG_00304","SJAG_01694","SJAG_03388","SJAG_05288","SJAG_05247","SJAG_02149","SJAG_00861","SJAG_00421","SJAG_01243","SJAG_02938","SJAG_04191","SJAG_00210","SJAG_03879","SJAG_02569","SJAG_04712","SJAG_03918","SJAG_00987","SJAG_04036","SJAG_04749","SJAG_02709","SJAG_00037","SJAG_00664","SJAG_01725","SJAG_03143","SJAG_02956","SJAG_04584","SJAG_03183","SJAG_02810","SJAG_04421","SJAG_00163","SJAG_01157","SJAG_03735","SJAG_04839","SJAG_05343","SJAG_02311","SJAG_06599","SJAG_00792","SJAG_02326","SJAG_01916","SJAG_02458","SJAG_04092","SJAG_00124","SJAG_00693","SJAG_05337","SJAG_02406","SJAG_02218","SJAG_02472","SJAG_00698","SJAG_03622","SJAG_04813","SJAG_01583","SJAG_02048","SJAG_04249","SJAG_00045","SJAG_01307","SJAG_03473","SJAG_00926","SJAG_06576","SJAG_00386","SJAG_01343","SJAG_03538","SJAG_02252","SJAG_02138","SJAG_05153","SJAG_04855","SJAG_03519","SJAG_01740"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66518,76705,88540],"is_not":false,"summary":null,"term":"GO:0000977"},{"annotations":[79357,88204,110682,101839,96700,71473,97309,71634,110698,79189,73901,74686,76133,88788,116418,94503,106529,99292,69795,94486,105914,110857,102489,77388,96348,98206,111682,103746,92226,101279,88148,103346,118165,96831,72288,93062,97312,74623,95806,80191,73980,75557,97310,95455,111722,73648,79526,72708,102073,79696,97311,97148,73097,99914,107380,116281,108440,110665,78122,104243,113490,87779,79261,71595,108994,114641,97308,69044,89848,74592,75482,72156,73472,89213,91673,77797,75606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[108615,106857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[93907,95341,111683,89031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000979"},{"annotations":[107381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"}]},"cv_name":"molecular_function","definition":"Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00045":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00741":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02458":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04381":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001012"],"synonyms":[{"name":"RNA polymerase II regulatory region DNA binding","type":"related"}],"termid":"GO:0000977","terms_by_termid":{"GO:0000977":null,"GO:0000978":null,"GO:0000979":null,"GO:0001162":null,"GO:0044377":null}}


id: PBO:0088917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis","termid":"PBO:0088917"}


id: MONDO:0008086
data:
  {"annotated_genes":["SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86698],"is_not":false,"summary":null,"term":"MONDO:0008086"}]},"cv_name":"mondo","definition":"An axonal form of hereditary motor and sensory neuropathy distinguished by prominent early sensory loss and later positive sensory phenomena, caused by mutations in SPTLC1.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 1","termid":"MONDO:0018213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"neuropathy, hereditary sensory and autonomic, type 1A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070152","OMIM:162400","UMLS:C5235211","MEDGEN:1716450","GARD:15095"],"synonyms":[{"name":"HSAN 1A","type":"related"},{"name":"HSAN1A","type":"exact"},{"name":"HSN 1A","type":"related"},{"name":"SPTLC1 hereditary sensory and autonomic neuropathy type 1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1 caused by mutation in SPTLC1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1A","type":"related"},{"name":"hereditary sensory and autonomic neuropathy type IA","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type IA","type":"related"},{"name":"neuropathy, hereditary sensory radicular, autosomal dominant, type 1A","type":"related"},{"name":"neuropathy, hereditary sensory, type 1A","type":"related"}],"termid":"MONDO:0008086","terms_by_termid":{"MONDO:0008086":null},"xrefs":{"Monarch":{"xref_id":"0008086"}}}


id: PBO:0034764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex ubiquitin conjugating enzyme E2 Ubc7","termid":"PBO:0034764"}


id: PR:000050544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the gtr2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC777.05","termid":"PR:000050544"}


id: PBO:0027329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins","termid":"PBO:0027329"}


id: PBO:0067725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 23","termid":"PBO:0067725"}


id: GO:0043995
data:
  {"annotated_genes":["SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88176],"is_not":false,"summary":null,"term":"GO:0043995"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 5) = CoA + histone H4 N6-acetyl-L-lysine (position 5).","definition_xrefs":["PMID:19056256","PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003824","GO:0016740","GO:0003674","GO:0034212"],"is_obsolete":false,"name":"histone H4K5 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase activity (H4-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H4-K5 specific)","type":"exact"}],"termid":"GO:0043995","terms_by_termid":{"GO:0043995":null}}


id: PBO:0035781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_membrane_during_vegetative_growth","termid":"PBO:0035781"}


id: PBO:0031019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level","termid":"PBO:0031019"}


id: GO:1905747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of saliva secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23419067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of saliva secretion","termid":"GO:0046877"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"negatively_regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of saliva secretion","synonyms":[{"name":"down regulation of saliva secretion","type":"exact"},{"name":"down regulation of salivation","type":"exact"},{"name":"down-regulation of saliva secretion","type":"exact"},{"name":"down-regulation of salivation","type":"exact"},{"name":"downregulation of saliva secretion","type":"exact"},{"name":"downregulation of salivation","type":"exact"},{"name":"inhibition of saliva secretion","type":"narrow"},{"name":"inhibition of salivation","type":"narrow"},{"name":"negative regulation of salivation","type":"exact"}],"termid":"GO:1905747"}


id: MONDO:0021315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the nasopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasopharyngeal neoplasm","termid":"MONDO:0005375"},{"relation_name":"is_a","term_name":"pharynx cancer","termid":"MONDO:0005517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"malignant tumor of nasopharynx","secondary_identifiers":["NCIT:C9321","ICD9:147.9","SCTID:187692001","UMLS:C0153392","MEDGEN:56299","ICD9:147.8"],"synonyms":[{"name":"cancer of nasopharynx","type":"exact"},{"name":"malignant nasopharyngeal neoplasm","type":"exact"},{"name":"malignant nasopharyngeal tumor","type":"exact"},{"name":"malignant nasopharyngeal tumour","type":"exact"},{"name":"malignant nasopharynx neoplasm","type":"exact"},{"name":"malignant neoplasm of nasopharynx","type":"exact"},{"name":"malignant neoplasm of the nasopharynx","type":"exact"},{"name":"malignant tumor of the nasopharynx","type":"exact"},{"name":"malignant tumour of the nasopharynx","type":"exact"},{"name":"nasopharynx cancer","type":"exact"}],"termid":"MONDO:0021315","xrefs":{"Monarch":{"xref_id":"0021315"}}}


