# terms

id: GO:0099076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion to the peroxisome, mediated by a mitochondrion-derived vesicle.","definition_xrefs":["PMID:20619655","GOC:bc","GOC:pad","GOC:PARL-UCL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrion to peroxisome vesicle-mediated transport","synonyms":[{"name":"mitochondrion to peroxisome transport","type":"exact"}],"termid":"GO:0099076"}


id: PATO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000054 absolute number (obsolete PATO:0000054)","termid":"PATO:0000054"}


id: FYPO:0000031
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04009:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04009","name":"ste11delta","uniquename":"SJAG_04009:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119142,119131,119209,119157,119132,119155,119139,119141,119125,119136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000280"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation is abnormal. Conjugation, also known as mating, is a process that results in the union of cellular and genetic information from cells of compatible mating types.","definition_xrefs":["PomBase:mah","GO:0000747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating phenotype","termid":"FYPO:0000301"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00993":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02592":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_04009":null},"genotype_count":10,"genotypes_by_uniquename":{"byr1delta":{"display_name":"byr1delta","display_uniquename":"byr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00993:allele-1","expression":"Null"}]}]},"byr2delta":{"display_name":"byr2delta","display_uniquename":"byr2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01718:allele-1","expression":"Null"}]}]},"gap1delta":{"display_name":"gap1delta","display_uniquename":"gap1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02379:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"spk1delta":{"display_name":"spk1delta","display_uniquename":"spk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02923:allele-1","expression":"Null"}]}]},"ste11delta":{"display_name":"ste11delta","display_uniquename":"ste11delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04009:allele-1","expression":"Null"}]}]},"ste6delta":{"display_name":"ste6delta","display_uniquename":"ste6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02486:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mating","references_by_uniquename":{"PMID:29566183":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_01794","SJAG_02592","SJAG_00993","SJAG_02486","SJAG_02923","SJAG_03453","SJAG_00514","SJAG_02379","SJAG_04009","SJAG_01718"],"single_locus_genotype_uniquenames":["ste6delta","ras1delta","gap1delta","ste11delta","scd2delta","scd1delta","byr1delta","spk1delta","byr2delta","sty1delta"],"synonyms":[{"name":"abnormal conjugation","type":"exact"},{"name":"abnormal conjugation with cellular fusion","type":"exact"},{"name":"abnormal zygote formation","type":"related"},{"name":"conjugation defects","type":"exact"}],"termid":"FYPO:0000031","terms_by_termid":{"FYECO:0000272":null,"FYPO:0000280":null,"FYPO_EXT:0000001":null}}


id: GO:0030758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5-trihydroxy-3,7-dimethoxyflavone + S-adenosyl-L-methionine(1+) = 3',5-dihydroxy-3,4',7-trimethoxyflavone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.83","RHEA:21832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"3,7-dimethylquercitin 4'-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03456","MetaCyc:2.1.1.83-RXN"],"synonyms":[{"name":"3,7-dimethylquercetin 4'-O-methyltransferase activity","type":"related"},{"name":"4'-OMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:3',4',5-trihydroxy-3,7-dimethoxyflavone 4'-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:5,3',4'-trihydroxy-3,7-dimethoxyflavone 4'-O-methyltransferase activity","type":"related"},{"name":"flavonol 4'-O-methyltransferase activity","type":"related"},{"name":"flavonol 4'-methyltransferase activity","type":"related"}],"termid":"GO:0030758"}


id: PBO:0027660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitochondrion","termid":"PBO:0027660"}


id: PBO:0063528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 9","termid":"PBO:0063528"}


id: PBO:0035765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035765"}


id: PBO:0002870
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.21","termid":"PBO:0002870"}


id: PBO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide 3-kinase family protein","termid":"PBO:0000247"}


id: PBO:0085586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in assembly and export of the large ribosomal subunit; nucleolar protein; constituent of 66S pre-ribosomal particles; contains a sigma(70)-like motif, which is thought to bind RNA","termid":"PBO:0085586"}


id: SO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_hydroxynorvalylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_hydroxynorvalylcarbamoyladenosine","secondary_identifiers":["RNAMOD:014"],"synonyms":[{"name":"N6 hydroxynorvalylcarbamoyladenosine","type":"exact"},{"name":"N6-hydroxynorvalylcarbamoyladenosine","type":"exact"},{"name":"hn6A","type":"exact"}],"termid":"SO:0001308"}


id: MONDO:0014535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperproinsulinemia","secondary_identifiers":["ICD9:250.80","MEDGEN:137967","MESH:C562776","UMLS:C0342283","EFO:0009650","OMIM:616214","SCTID:237613005"],"synonyms":[{"name":"hyperproinsulinemia","type":"exact"}],"termid":"MONDO:0014535","xrefs":{"Monarch":{"xref_id":"0014535"}}}


id: GO:0140417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion from intracellular stores by a channel that opens when a ATP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:22736763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"intracellularly ATP-gated calcium channel activity","synonyms":[{"name":"ATP-sensitive calcium-release channel activity","type":"related"}],"termid":"GO:0140417"}


id: PBO:0063045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralemmin","termid":"PBO:0063045"}


id: GO:0050034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnofuranose + NAD+ = L-rhamnono-1,4-lactone + H+ + NADH.","definition_xrefs":["EC:1.1.1.173","RHEA:12649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-rhamnose 1-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03942","MetaCyc:L-RHAMNOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"L-rhamnofuranose:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0050034"}


id: GO:0051330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by meiosis and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G1 phase","termid":"GO:0051318"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051328"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051328"],"is_obsolete":false,"name":"meiotic G1 phase","synonyms":[{"name":"G1 phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051330"}


id: PBO:0027134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomere-nuclear_envelope_distance_during_mitotic_G2_phase","termid":"PBO:0027134"}


id: PBO:0042103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 175","termid":"PBO:0042103"}


id: PBO:0050250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 28","termid":"PBO:0050250"}


id: PBO:0090515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 and Swr1 complex YEATS family subunit Yaf9","termid":"PBO:0090515"}


id: PBO:0040235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF6 divergent transcript","termid":"PBO:0040235"}


id: PBO:0053484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 459","termid":"PBO:0053484"}


id: GO:0043516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"regulates","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA damage response, signal transduction by p53 class mediator","synonyms":[{"name":"regulation of p53 induced by DNA damage response","type":"exact"}],"termid":"GO:0043516"}


id: SO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby an arm exists as an individual chromosome element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_chromosome_arm","synonyms":[{"name":"free chromosome arm","type":"exact"}],"termid":"SO:0000065"}


id: PBO:0028328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_centromere_central_core","termid":"PBO:0028328"}


id: PBO:0026992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mannose_level_in_glycoprotein_glycan","termid":"PBO:0026992"}


id: PBO:0035751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_tryptophan","termid":"PBO:0035751"}


id: GO:0019257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-nitrotoluene, 1-methyl-4-nitrobenzene. It is a light yellow liquid with a weak aromatic odor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrotoluene metabolic process","termid":"GO:0019326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"4-nitrotoluene metabolic process","synonyms":[{"name":"4-nitrotoluene metabolism","type":"exact"},{"name":"4NT metabolic process","type":"exact"},{"name":"4NT metabolism","type":"exact"}],"termid":"GO:0019257"}


id: MONDO:0043537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A headache disorder that is characterized by periodic severe, unilateral orbital, supraorbital, and/or temporal pain, and is associated with ipsilateral cranial autonomic symptoms.","definition_xrefs":["NCIT:C117077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"trigeminal autonomic cephalalgia","termid":"MONDO:0015530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cluster headache syndrome","secondary_identifiers":["MEDGEN:3503","Orphanet:1002","UMLS:C0009088","MESH:D003027","SCTID:193031009"],"synonyms":[{"name":"Cephalgia, histamine","type":"exact"},{"name":"Cephalgias, histamine","type":"exact"},{"name":"Horton headache","type":"exact"},{"name":"Horton syndrome","type":"exact"},{"name":"Horton's headache","type":"exact"},{"name":"Horton's neuralgia","type":"exact"},{"name":"Horton's syndrome","type":"exact"},{"name":"Hortons syndrome","type":"exact"},{"name":"atypical cluster headache","type":"related"},{"name":"atypical cluster headaches","type":"related"},{"name":"beuralgias, ciliary","type":"related"},{"name":"chronic cluster headache","type":"related"},{"name":"chronic cluster headaches","type":"related"},{"name":"ciliary neuralgia","type":"exact"},{"name":"ciliary neuralgias","type":"exact"},{"name":"cluster headache","type":"exact"},{"name":"cluster headache syndrome","type":"exact"},{"name":"cluster headache syndromes","type":"related"},{"name":"cluster headache, atypical","type":"related"},{"name":"cluster headache, chronic","type":"related"},{"name":"cluster headache, episodic","type":"related"},{"name":"cluster headaches","type":"related"},{"name":"cluster headaches, atypical","type":"related"},{"name":"cluster headaches, chronic","type":"related"},{"name":"cluster headaches, episodic","type":"related"},{"name":"cluster migraine","type":"exact"},{"name":"episodic cluster headache","type":"related"},{"name":"episodic cluster headaches","type":"related"},{"name":"erythromelalgia of the head","type":"exact"},{"name":"erythroprosopalgia of bing","type":"exact"},{"name":"headache syndrome, cluster","type":"related"},{"name":"headache syndromes, cluster","type":"related"},{"name":"headache, atypical cluster","type":"related"},{"name":"headache, chronic cluster","type":"related"},{"name":"headache, cluster","type":"related"},{"name":"headache, episodic cluster","type":"related"},{"name":"headaches, atypical cluster","type":"related"},{"name":"headaches, chronic cluster","type":"related"},{"name":"headaches, cluster","type":"related"},{"name":"headaches, episodic cluster","type":"related"},{"name":"histamine cephalgia","type":"exact"},{"name":"histamine cephalgias","type":"exact"},{"name":"histamine headache","type":"exact"},{"name":"migraine, neuralgic","type":"exact"},{"name":"migraines, neuralgic","type":"exact"},{"name":"migrainous neuralgia","type":"exact"},{"name":"neuralgia, ciliary","type":"related"},{"name":"neuralgic migraine","type":"related"},{"name":"neuralgic migraines","type":"related"},{"name":"red migraine","type":"exact"},{"name":"syndrome, Horton","type":"related"},{"name":"syndrome, Horton's","type":"related"},{"name":"syndrome, cluster headache","type":"related"},{"name":"syndromes, cluster headache","type":"related"},{"name":"vasomotor headache","type":"related"}],"termid":"MONDO:0043537","xrefs":{"Monarch":{"xref_id":"0043537"}}}


id: PBO:0067207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 272, pseudogene","termid":"PBO:0067207"}


id: PBO:0051157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-37 (pseudogene)","termid":"PBO:0051157"}


id: PBO:0057515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 633","termid":"PBO:0057515"}


id: PBO:0086823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL018C has a paralog, YNL034W, that arose from a segmental duplication","termid":"PBO:0086823"}


id: PBO:0042106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 179","termid":"PBO:0042106"}


id: MONDO:0018635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic phalangeal acro-osteolysis","secondary_identifiers":["MEDGEN:1803504","Orphanet:444316","GARD:21860","UMLS:C5680064"],"synonyms":[{"name":"idiopathic phalangeal acroosteolysis","type":"exact"}],"termid":"MONDO:0018635","xrefs":{"Monarch":{"xref_id":"0018635"}}}


id: GO:0007416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction assembly","termid":"GO:0034329"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"synapse assembly","secondary_identifiers":["Wikipedia:Synaptogenesis"],"synonyms":[{"name":"synapse biogenesis","type":"exact"},{"name":"synaptogenesis","type":"exact"}],"termid":"GO:0007416"}


id: GO:1901056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trimethylenediamine.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00010","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"trimethylenediamine metabolic process","termid":"GO:1901055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimethylenediamine catabolic process","synonyms":[{"name":"trimethylenediamine breakdown","type":"exact"},{"name":"trimethylenediamine catabolism","type":"exact"},{"name":"trimethylenediamine degradation","type":"exact"}],"termid":"GO:1901056"}


id: PBO:0027273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_protein_coding_gene","termid":"PBO:0027273"}


id: PBO:0053102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 1","termid":"PBO:0053102"}


id: MONDO:0008226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized aggressive periodontitis, formerly called localized juvenile periodontitis. It is a destructive form of periodontitis characterized by ALVEOLAR BONE LOSS of the MOLARS and INCISORS. Inflammation and loss of PERIODONTIUM that is characterized by rapid attachment loss and bone destruction in the presence of little local factors such as DENTAL PLAQUE and DENTAL CALCULUS. This highly destructive form of periodontitis often occurs in young people and was called early-onset periodontitis, but this disease also appears in old people.","definition_xrefs":["EFO:0006342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic periodontitis","termid":"MONDO:0005593"},{"relation_name":"is_a","term_name":"CTSC-related disorder","termid":"MONDO:0800465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"periodontitis, aggressive 1","secondary_identifiers":["UMLS:C4551681","MESH:D010520","ICD9:523.5","OMIM:170650","DOID:1474","MEDGEN:1644602"],"synonyms":[{"name":"juvenile periodontitis","type":"exact"},{"name":"periodontitis 1, juvenile","type":"exact"},{"name":"periodontitis, aggressive, 1","type":"related"},{"name":"periodontitis, aggressive, type 1","type":"exact"},{"name":"periodontitis, juvenile","type":"related"},{"name":"periodontitis, prepubertal","type":"related"}],"termid":"MONDO:0008226","xrefs":{"Monarch":{"xref_id":"0008226"}}}


id: SO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against a nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"match","termid":"SO:0000343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_match","synonyms":[{"name":"nucleotide match","type":"exact"}],"termid":"SO:0000347"}


id: PBO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B beta subunit","termid":"PBO:0032732"}


id: PBO:0078422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-3","termid":"PBO:0078422"}


id: PBO:0090829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha/beta hydrolase fold","termid":"PBO:0090829"}


id: MONDO:0019949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-actinopathy","termid":"MONDO:0100084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"zebra body myopathy","secondary_identifiers":["ICD9:359.89","icd11.foundation:1699813614","MEDGEN:543080","Orphanet:97240","UMLS:C0270969","GARD:19354","SCTID:34513009"],"termid":"MONDO:0019949","xrefs":{"Monarch":{"xref_id":"0019949"}}}


id: PBO:0028817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028817"}


id: PBO:0001357
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fusion degradation protein","termid":"PBO:0001357"}


id: PBO:0029647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_cellular_response_to_copper_ion","termid":"PBO:0029647"}


id: PBO:0036175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_eMTOC_assembly","termid":"PBO:0036175"}


id: PBO:0075793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 11 pseudogene 1","termid":"PBO:0075793"}


id: MOD:00874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to isoglutamyl glutamyl-glutamyl-glutamic acid, forming an isopeptide bond with a triglutamic acid.","definition_xrefs":["PubMed:10747868","PubMed:1680872","DeltaMass:0","RESID:AA0202#var","Unimod:452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl triglutamic acid","synonyms":[{"name":"GluGluGlu","type":"related"},{"name":"N alpha -(gamma-Glutamyl)-Glu3","type":"exact"},{"name":"triglutamyl","type":"related"}],"termid":"MOD:00874"}


id: GO:0060938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an epicardial cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}


id: PATO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular placement quality inhering in a bearer by virtue of the bearer being changed in position in relation to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced to","synonyms":[{"name":"mislocalised to","type":"related"}],"termid":"PATO:0002168"}


id: PBO:0027369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_amino_acid_level","termid":"PBO:0027369"}


id: PBO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phosphatidylserine_absent_from_cell","termid":"PBO:0030335"}


id: PBO:0043183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 3","termid":"PBO:0043183"}


id: PBO:0088770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon gamma subunit Sss1","termid":"PBO:0088770"}


id: MONDO:1012288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive ataxia, non-human animal","termid":"MONDO:1011633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive ataxia, pig","secondary_identifiers":["OMIA:001091-9823"],"termid":"MONDO:1012288","xrefs":{"Monarch":{"xref_id":"1012288"}}}


id: PBO:0059964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 9","termid":"PBO:0059964"}


id: MONDO:0016391
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86167,86168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"}]},"cv_name":"mondo","definition":"Neonatal diabetes mellitus presents as hyperglycemia, failure to thrive and, in some cases, dehydration and ketoacidosis which may be severe with coma, in a child within the first months of life.","definition_xrefs":["Orphanet:224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic diabetes","termid":"MONDO:0015967"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0005015"],"is_obsolete":false,"name":"neonatal diabetes mellitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:57645","icd11.foundation:1217915084","NCIT:C99248","ICD10CM:P70.2","ICD9:775.1","DOID:11717","MedDRA:10028933","UMLS:C0158981","GARD:18682","NANDO:2200463","SCTID:49817004"],"synonyms":[{"name":"NDM","type":"exact"},{"name":"congenital diabetes mellitus","type":"exact"},{"name":"diabetes mellitus syndrome in newborn infant","type":"exact"}],"termid":"MONDO:0016391","terms_by_termid":{"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0016391"}}}


id: MONDO:0020476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesial temporal lobe epilepsy with hippocampal sclerosis is a rare epilepsy syndrome defined by seizures originating in limbic areas of the mesial temporal lobe, particularly in the hippocampus, amygdala, and in the parahippocampal gyrus and its connections, and hippocampal sclerosis, usually unilateral or asymmetric. It is frequently associated with an initial precipitating event, such as febrile seizures, hypoxia, intracranial infection or head trauma, most often occurring in the first five years of life, followed by a latent period without seizures. Typical seizures consist of a characteristic aura that is frequently a rising epigastric sensation associated with emotional disturbances, illusions, and autonomic symptoms (widened pupils, palpitations), progressive impairment of consciousness, oro-alimentary automatisms (lip smacking, chewing, licking, tooth grinding), behavioral arrest, head deviation, dystonic postures, hand and verbal automatisms. Seizures are followed by postictal dysfunction. Initially, seizures are easily controlled with antiepileptic drugs, later they frequently become refractory and associated with progressive behavioral changes and memory deficits.","definition_xrefs":["Orphanet:99701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"mesial temporal lobe epilepsy with hippocampal sclerosis","secondary_identifiers":["GARD:19684","MEDGEN:1659013","UMLS:C4749367","NANDO:1200588"],"synonyms":[{"name":"MTLE-HS","type":"exact"}],"termid":"MONDO:0020476","xrefs":{"Monarch":{"xref_id":"0020476"}}}


id: PBO:0073402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 5","termid":"PBO:0073402"}


id: GO:2000614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"is_a","term_name":"regulation of thyroid-stimulating hormone secretion","termid":"GO:2000612"},{"relation_name":"positively_regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"positive regulation of TSH secretion","type":"exact"},{"name":"positive regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000614"}


id: MONDO:0012867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary spastic paraplegia that has material basis in variation in the chromosome region 4p16-p15.","definition_xrefs":["PMID:18401025","DOID:0110789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"hereditary spastic paraplegia 38","secondary_identifiers":["OMIM:612335","Orphanet:171617","GARD:17065","MEDGEN:436764","MESH:C567349","UMLS:C2676732"],"synonyms":[{"name":"SPG38","type":"exact"},{"name":"autosomal dominant spastic paraplegia 38","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 38","type":"exact"},{"name":"hereditary spastic paraplegia type 38","type":"exact"},{"name":"spastic paraplegia 38, autosomal dominant","type":"related"}],"termid":"MONDO:0012867","xrefs":{"Monarch":{"xref_id":"0012867"}}}


id: PBO:0030216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_heat","termid":"PBO:0030216"}


id: PBO:0060253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 3","termid":"PBO:0060253"}


id: MONDO:0018524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intraductal papillary mucinous carcinoma of pancreas (obsolete MONDO:0018524)","termid":"MONDO:0018524","xrefs":{"Monarch":{"xref_id":"0018524"}}}


id: GO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive gamma-delta T cell acquires the specialized features of an effector, regulatory, or memory T cell and contributes to an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"},{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell differentiation involved in immune response","synonyms":[{"name":"gamma-delta T cell development involved in immune response","type":"related"},{"name":"gamma-delta T cell differentiation during immune response","type":"related"},{"name":"gamma-delta T lymphocyte differentiation during immune response","type":"related"},{"name":"gamma-delta T-cell differentiation during immune response","type":"related"},{"name":"gamma-delta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002303"}


id: PBO:0059268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL32 pseudogene 2","termid":"PBO:0059268"}


id: MONDO:0009481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jumping Frenchmen of Maine","secondary_identifiers":["MEDGEN:224824","OMIM:244100","UMLS:C1280764"],"synonyms":[{"name":"'jumpers' of Maine","type":"related"},{"name":"Jumping Frenchmen of Maine","type":"exact"},{"name":"exaggerated startle reflex","type":"related"}],"termid":"MONDO:0009481","xrefs":{"Monarch":{"xref_id":"0009481"}}}


id: PBO:0055912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 36","termid":"PBO:0055912"}


id: GO:0021895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex neuron differentiation","termid":"GO:0021895"}


id: PBO:0090570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho7","termid":"PBO:0090570"}


id: PBO:0072462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 26","termid":"PBO:0072462"}


id: PBO:0059155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase 1","termid":"PBO:0059155"}


id: PR:O14032
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0664 stress-induced protein C29B12.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.11c","synonyms":[{"name":"Spom972h-SPAC29B12.11c","type":"exact"}],"termid":"PR:O14032"}


id: MONDO:0003177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that arises from the prostate gland.","definition_xrefs":["NCIT:C5539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"prostate adenocarcinoma","termid":"MONDO:0005082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate adenoid cystic carcinoma","secondary_identifiers":["MEDGEN:233352","DOID:4868","UMLS:C1335502"],"synonyms":[{"name":"adenoid cystic carcinoma of prostate","type":"exact"},{"name":"adenoid cystic carcinoma of the prostate","type":"exact"},{"name":"prostate adenoid cystic carcinoma","type":"exact"},{"name":"prostate gland adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003177","xrefs":{"Monarch":{"xref_id":"0003177"}}}


id: PR:P33277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P33277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.12c","synonyms":[{"name":"Spom972h-gap1","type":"exact"},{"name":"ras GTPase-activating protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P33277"}


id: PBO:0004864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylanthranilate transferase Trp4 (predicted)","termid":"PBO:0004864"}


id: GO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"positively_regulates","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell tolerance induction","synonyms":[{"name":"activation of T cell tolerance induction","type":"narrow"},{"name":"positive regulation of T lymphocyte tolerance induction","type":"exact"},{"name":"positive regulation of T-cell tolerance induction","type":"exact"},{"name":"positive regulation of T-lymphocyte tolerance induction","type":"exact"},{"name":"stimulation of T cell tolerance induction","type":"narrow"},{"name":"up regulation of T cell tolerance induction","type":"exact"},{"name":"up-regulation of T cell tolerance induction","type":"exact"},{"name":"upregulation of T cell tolerance induction","type":"exact"}],"termid":"GO:0002666"}


id: PATO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of having sharp straight-edged teeth pointing to the apex.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serrated","synonyms":[{"name":"serrate","type":"exact"}],"termid":"PATO:0001206"}


id: PBO:0075882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL6 antisense RNA 1","termid":"PBO:0075882"}


id: MONDO:0001268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A loss of gum tissue resulting in an exposure of the roots of the teeth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival disorder","termid":"MONDO:0002021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival recession","secondary_identifiers":["ICD10CM:K06.0","icd11.foundation:1059404242","ICD9:523.22","ICD9:523.21","ICD9:523.23","MEDGEN:6607","MESH:D005889","ICD9:523.24","SCTID:59898000","UMLS:C0017572","DOID:1134","ICD9:523.20","ICD9:523.2"],"synonyms":[{"name":"gingival recession","type":"exact"},{"name":"gingival recession, localised","type":"exact"},{"name":"gingival recession, localized","type":"exact"},{"name":"gingival recession, unspecified","type":"exact"},{"name":"localised gingival recession","type":"exact"},{"name":"localized gingival recession","type":"exact"},{"name":"minimal gingival recession","type":"exact"},{"name":"moderate gingival recession","type":"exact"},{"name":"severe gingival recession","type":"exact"}],"termid":"MONDO:0001268","xrefs":{"Monarch":{"xref_id":"0001268"}}}


id: PBO:0116672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 6 interacting protein 1 pseudogene 3","termid":"PBO:0116672"}


id: GO:0043184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor 2.","definition_xrefs":["GOC:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor binding","termid":"GO:0005172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor 2 binding","synonyms":[{"name":"Flk-1 binding","type":"exact"},{"name":"KDR binding","type":"broad"},{"name":"VEGF receptor 2 binding","type":"exact"},{"name":"VEGFR 2 binding","type":"exact"},{"name":"kinase domain region binding","type":"exact"}],"termid":"GO:0043184"}


id: MONDO:0100169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"polyneuropathy, inflammatory demyelinating, chronic","synonyms":[{"name":"CIDP","type":"exact"}],"termid":"MONDO:0100169","xrefs":{"Monarch":{"xref_id":"0100169"}}}


id: MONDO:0021083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the KIF21A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital fibrosis of extraocular muscles type 1","secondary_identifiers":["OMIM:135700","UMLS:C1851102","DOID:0081015","MEDGEN:376943"],"synonyms":[{"name":"CFEOM1","type":"exact"},{"name":"Feom1 locus","type":"related"},{"name":"KIF21A congenital fibrosis of extraocular muscles","type":"exact"},{"name":"blepharoptosis with absent eye movements","type":"related"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in KIF21A","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 1","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3B","type":"related"},{"name":"ophthalmoplegia, congenital","type":"related"}],"termid":"MONDO:0021083","xrefs":{"Monarch":{"xref_id":"0021083"}}}


id: PBO:0018140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain protein, involved in cytoplasmic translation Gir2","termid":"PBO:0018140"}


id: GO:0097394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of telomeric repeat-containing RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II promoter.","definition_xrefs":["GOC:al","PMID:22139915"],"gene_count":0,"genotype_count":0,"name":"obsolete telomeric repeat-containing RNA transcription by RNA polymerase II (obsolete GO:0097394)","synonyms":[{"name":"TERRA RNA transcription from RNA pol II promoter","type":"related"},{"name":"telomeric RNA transcription from Pol II promoter","type":"related"},{"name":"telomeric repeat-containing RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:0097394"}


id: PBO:0041164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 1 pseudogene 1","termid":"PBO:0041164"}


id: MONDO:0013774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated trigonocephaly in which the cause of the disease is a mutation in the FREM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated trigonocephaly","termid":"MONDO:0018065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly 2","secondary_identifiers":["UMLS:C3280974","MEDGEN:482604","OMIM:614485","GARD:18559"],"synonyms":[{"name":"FREM1 isolated trigonocephaly","type":"exact"},{"name":"TRIGNO2","type":"related"},{"name":"craniosynostosis, metopic","type":"related"},{"name":"isolated trigonocephaly caused by mutation in FREM1","type":"exact"},{"name":"trigonocephaly 2","type":"exact"},{"name":"trigonocephaly type 2","type":"exact"}],"termid":"MONDO:0013774","xrefs":{"Monarch":{"xref_id":"0013774"}}}


id: PBO:0052668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 36","termid":"PBO:0052668"}


id: GO:0075215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"spore encystment","termid":"GO:0075214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of spore encystment on host","termid":"GO:0075215"}


id: MONDO:0850339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade ependymoma that is located within the posterior fossa.","definition_xrefs":["DOID:0080889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic ependymoma","termid":"MONDO:0016700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"posterior fossa ependymoma","secondary_identifiers":["MEDGEN:1811888","UMLS:C5670542"],"termid":"MONDO:0850339","xrefs":{"Monarch":{"xref_id":"0850339"}}}


id: PBO:0064522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C","termid":"PBO:0064522"}


id: PBO:0083333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YFL015C","termid":"PBO:0083333"}


id: GO:0010778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0140013","GO:0008150","GO:0006259","GO:0006281","GO:0007049"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in reciprocal meiotic recombination","termid":"GO:0010778"}


id: PBO:0055315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2743","termid":"PBO:0055315"}


id: PBO:0116754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit E1","termid":"PBO:0116754"}


id: SO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 18th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K18_acetylation_site","synonyms":[{"name":"H3K18 acetylation site","type":"exact"},{"name":"H3K18ac","type":"exact"}],"termid":"SO:0001718"}


id: GO:0034847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: naphthyl-2-hydroxymethyl-succinyl-CoA = naphthyl-2-oxomethyl-succinyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthyl-2-hydroxymethyl-succinyl-CoA dehydrogenase activity (obsolete GO:0034847)","termid":"GO:0034847"}


id: MONDO:0009743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurologic disease, infantile multisystem, with osseous fragility","secondary_identifiers":["MESH:C564954","OMIM:256720","MEDGEN:338057","UMLS:C1850465"],"synonyms":[{"name":"neurologic disease, infantile multisystem, with osseous fragility","type":"exact"}],"termid":"MONDO:0009743","xrefs":{"Monarch":{"xref_id":"0009743"}}}


id: GO:0036010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an endosome.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to endosome","synonyms":[{"name":"protein localisation in endosome","type":"exact"},{"name":"protein localization in endosome","type":"exact"}],"termid":"GO:0036010"}


id: GO:0046423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,13S,15Z)-12,13-epoxyoctadeca-9,11,15-trienoate = (15Z)-12-oxophyto-10,15-dienoate.","definition_xrefs":["RHEA:22592","EC:5.3.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824","GO:0009975"],"is_obsolete":false,"name":"allene-oxide cyclase activity","secondary_identifiers":["MetaCyc:ALLENE-OXIDE-CYCLASE-RXN","KEGG_REACTION:R03402"],"synonyms":[{"name":"(9Z)-(13S)-12,13-epoxyoctadeca-9,11,15-trienoate isomerase (cyclizing)","type":"related"}],"termid":"GO:0046423"}


id: PBO:0088881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transmembrane transporter","termid":"PBO:0088881"}


id: MONDO:1012531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digital dermatitis, non-human animal","termid":"MONDO:1011774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digital dermatitis, cattle","secondary_identifiers":["OMIA:002224-9913"],"termid":"MONDO:1012531","xrefs":{"Monarch":{"xref_id":"1012531"}}}


id: GO:0047005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + 16-alpha-hydroxysteroid = NAD(P)H + H+ + 16-oxosteroid.","definition_xrefs":["EC:1.1.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"16-alpha-hydroxysteroid dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:1.1.1.147-RXN"],"synonyms":[{"name":"16alpha-hydroxy steroid dehydrogenase activity","type":"related"},{"name":"16alpha-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"16alpha-hydroxysteroid:NAD(P)+ 16-oxidoreductase activity","type":"related"}],"termid":"GO:0047005"}


id: MONDO:0021529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the chest wall.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of chest wall","termid":"MONDO:0021388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of chest wall","secondary_identifiers":["MEDGEN:195776","SCTID:92058007","NCIT:C8529","ICD9:229.8","UMLS:C0684831"],"synonyms":[{"name":"benign chest wall neoplasm","type":"exact"},{"name":"benign chest wall tumor","type":"exact"},{"name":"benign chest wall tumour","type":"exact"},{"name":"benign neoplasm of the chest wall","type":"exact"},{"name":"benign tumor of chest wall","type":"exact"},{"name":"benign tumor of the chest wall","type":"exact"},{"name":"benign tumour of chest wall","type":"exact"},{"name":"benign tumour of the chest wall","type":"exact"},{"name":"chest wall benign neoplasm","type":"exact"}],"termid":"MONDO:0021529","xrefs":{"Monarch":{"xref_id":"0021529"}}}


id: PBO:0088285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4 kinase plasma membrane scaffold Erf3 partner Ypp1","termid":"PBO:0088285"}


id: PBO:0004386
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"after human IQWD1","termid":"PBO:0004386"}


id: GO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-threo-aldose + NAD+ = a D-threo-aldono-1,5-lactone + NADH.","definition_xrefs":["EC:1.1.1.122","MetaCyc:D-THREO-ALDOSE-1-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-threo-aldose 1-dehydrogenase activity","secondary_identifiers":["RHEA:19645"],"synonyms":[{"name":"(2S,3R)-aldose dehydrogenase activity","type":"related"},{"name":"D-threo-aldose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"L-fucose (D-arabinose) dehydrogenase activity","type":"related"},{"name":"L-fucose dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-fucose","type":"related"}],"termid":"GO:0047834"}


id: GO:0018231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine to form peptidyl-S-diacylglycerol-L-cysteine; the oleate and palmitate actually represent mixtures of saturated (generally at 3') and unsaturated (generally at 2') fatty acids.","definition_xrefs":["RESID:AA0107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine","synonyms":[{"name":"peptidyl-S-diacylglycerol-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diacylglycerol-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diacylglycerol-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018231"}


id: PR:Q96TL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rap1 gene.","definition_xrefs":["UniProtKB:Q96TL7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein rap1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.02","synonyms":[{"name":"Spom972h-rap1","type":"exact"}],"termid":"PR:Q96TL7"}


id: MONDO:0007384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital trigeminal anesthesia is a rare neuro-ophtalmological disorder characterized by a congenital sensory deficit involving all or some of the sensory components of the trigeminal nerve. Due to corneal anesthesia, it usually presents with recurrent, painless eye infections, painless corneal opacities and/or poorly healing, ulcerated wounds on the facial skin and mucosa (typically the buccal mucosa and/or nasal septum).","definition_xrefs":["Orphanet:231013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"congenital trigeminal anesthesia","secondary_identifiers":["OMIM:122450","GARD:10034","UMLS:C1852541","MEDGEN:342259","MESH:C536440","SCTID:763218005"],"synonyms":[{"name":"corneal hypesthesia, familial","type":"related"},{"name":"familial trigeminal anaesthesia","type":"related"},{"name":"familial trigeminal anesthesia","type":"related"},{"name":"trigeminal anesthesia, familial","type":"related"}],"termid":"MONDO:0007384","xrefs":{"Monarch":{"xref_id":"0007384"}}}


id: GO:0030397
data:
  {"annotated_genes":["SJAG_04578","SJAG_00680","SJAG_00840","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007077"},{"annotations":[103451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[74100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034496"},{"annotations":[93596,103454],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"The controlled breakdown of any cell membrane in the context of a normal process such as autophagy.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null,"SJAG_02100":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane disassembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"membrane breakdown","type":"exact"},{"name":"membrane catabolism","type":"exact"},{"name":"membrane degradation","type":"exact"}],"termid":"GO:0030397","terms_by_termid":{"GO:0007077":null,"GO:0034496":null,"GO:0140516":null,"GO:1905557":null}}


id: FYPO:0001173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to form a 2,2,7-trimethylguanosine cap structure is abolished.","definition_xrefs":["GO:0036261","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal 7-methylguanosine cap hypermethylation","termid":"FYPO:0001172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abolished 7-methylguanosine cap hypermethylation","synonyms":[{"name":"2,2,7-trimethylguanosine cap formation abolished","type":"exact"},{"name":"7-methylguanosine cap hypermethylation abolished","type":"exact"},{"name":"7-methylguanosine cap hypermethylation abolished during vegetative growth","type":"exact"},{"name":"TMG cap formation abolished","type":"exact"},{"name":"abolished 7-methylguanosine cap hypermethylation during mitotic cell cycle","type":"related"},{"name":"conversion of m(7)G to m(3)G abolished","type":"exact"},{"name":"snRNA capping abolished","type":"narrow"},{"name":"snoRNA capping abolished","type":"narrow"}],"termid":"FYPO:0001173"}


id: GO:0062056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a compound eye pigment cell, a cell of the retina containing screening pigments that functions to screen photoreceptors from light leaking from adjacent ommatidia.","definition_xrefs":["PMID:8929534","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye pigment cell differentiation","termid":"GO:0062056"}


id: GO:0070487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one monocyte to one or more other monocytes via adhesion molecules.","definition_xrefs":["GOC:sl","PMID:12972508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte aggregation","termid":"GO:0070486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"monocyte aggregation","synonyms":[{"name":"mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:0070487"}


id: PATO:0001719
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality which holds by virtue of whether the bearer exhibits the ability to receive another agentitive entity.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptivity","termid":"PATO:0001719"}


id: MONDO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteoporosis caused by chronic glucocorticoid use. Glucocorticoids impair the replication, differentiation and function of osteoblasts and induce the apoptosis of mature osteoblasts and osteocytes; the also favor osteoclastogenesis leading to an increase in bone resorption.","definition_xrefs":["DOID:0060343","PMID:17566815","PMID:22870429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid-induced osteoporosis","termid":"MONDO:0024651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"glucocorticoid-induced osteoporosis","synonyms":[{"name":"steroid-induced osteoporosis","type":"related"}],"termid":"MONDO:0000757","xrefs":{"Monarch":{"xref_id":"0000757"}}}


id: GO:0034053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont modulates the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of host defense-related programmed cell death (obsolete GO:0034053)","synonyms":[{"name":"modulation by symbiont of host HR","type":"narrow"},{"name":"modulation by symbiont of host defense-related PCD","type":"exact"},{"name":"modulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"modulation by symbiont of host hypersensitive response","type":"narrow"},{"name":"modulation by symbiont of plant HR","type":"narrow"},{"name":"modulation by symbiont of plant hypersensitive response","type":"narrow"}],"termid":"GO:0034053"}


id: FYPO:0007759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids lasts longer than normal in centromeric regions, continuing into anaphase of the first meiotic nuclear division.","definition_xrefs":["PMID:33888556","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"ectopic meiotic sister chromatid cohesion at centromere during meiosis I","type":"related"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase I","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase of meiosis I","type":"narrow"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"increased duration of sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"prolonged meiotic sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0007759"}


id: GO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cytokine production that contributes to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002739","GO:0002742"],"synonyms":[{"name":"regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"regulation of cytokine production during immune response","type":"related"},{"name":"regulation of cytokine secretion involved in immune response","type":"narrow"}],"termid":"GO:0002718"}


id: MONDO:0021521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the mediastinum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of mediastinum","termid":"MONDO:0021386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of mediastinum","secondary_identifiers":["NCIT:C3604","MEDGEN:102298","ICD10CM:D15.2","icd11.foundation:1337535393","UMLS:C0153956","SCTID:92214000","ICD9:212.5"],"synonyms":[{"name":"benign mediastinal neoplasm","type":"exact"},{"name":"benign mediastinal tumor","type":"exact"},{"name":"benign mediastinal tumour","type":"exact"},{"name":"benign neoplasm of the mediastinum","type":"exact"},{"name":"benign tumor of mediastinum","type":"exact"},{"name":"benign tumor of the mediastinum","type":"exact"},{"name":"benign tumour of mediastinum","type":"exact"},{"name":"benign tumour of the mediastinum","type":"exact"},{"name":"mediastinum benign neoplasm","type":"exact"}],"termid":"MONDO:0021521","xrefs":{"Monarch":{"xref_id":"0021521"}}}


id: PBO:0034037
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_abstract","termid":"PBO:0034037"}


id: PBO:0086201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; likely functions in cristae junction formation; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086201"}


id: PBO:0078156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 34","termid":"PBO:0078156"}


id: PBO:0083823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Dam1p and Pse1p to connect the DASH complex with microtubules (MT); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis","termid":"PBO:0083823"}


id: GO:0046113
data:
  {"annotated_genes":["SJAG_01997","SJAG_04297","SJAG_04299","SJAG_05287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[73218,91533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[117170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01997":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleobase catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase breakdown","type":"exact"},{"name":"nucleobase catabolism","type":"exact"},{"name":"nucleobase degradation","type":"exact"}],"termid":"GO:0046113","terms_by_termid":{"GO:0006145":null,"GO:0006147":null,"GO:0009115":null}}


id: GO:0071703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which an organic substance stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of organic substance (obsolete GO:0071703)","termid":"GO:0071703"}


id: GO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thyroid hormone receptor signaling pathway","termid":"GO:0002155"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"negative regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"negative regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002156"}


id: GO:0015114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of phosphate ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphate ion transmembrane transporter activity (obsolete GO:0015114)","synonyms":[{"name":"phosphate transmembrane transporter activity","type":"related"}],"termid":"GO:0015114"}


id: PBO:0050057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, X (pseudogene)","termid":"PBO:0050057"}


id: PBO:0075901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2","termid":"PBO:0075901"}


id: MONDO:0023113
data:
  {"annotated_genes":["SJAG_01620","SJAG_02187","SJAG_02226","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[84946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[85408,85409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"Familial colon cancer is a cluster of colon cancer within a family. Most cases of colon cancer occur sporadically in people with little to no family history of the condition. Approximately 3-5% of colon cancer is considered 'hereditary' and is thought to be caused by an inherited predisposition tocolon cancer that is passed down through a family in an autosomal dominant or autosomal recessive manner. In some of these families, the underlying genetic cause is not known; however, many of these cases are caused by changes (mutations) in the APC , MYH , MLH1 , MSH2 , MSH6 , PMS2 , EPCAM , PTEN , STK11 , SMAD4 , BMPR1A , NTHL1 , POLE , and POLD1 genes (which are associated with hereditary cancer syndromes). An additional 10-30% of people diagnosed with colon cancer have a significant family history of the condition but have no identifiable mutation in a gene known to cause a hereditary predisposition to colon cancer. These clusters of colon cancer are likely due to a combination of gene(s) and other shared factors such as environment and lifestyle. High-risk cancer screening and other preventative measures such as prophylactic surgeries are typically recommended in people who have an increased risk for colon cancer based on their personal and/or family histories.","definition_xrefs":["GARD:0008533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"colorectal cancer","termid":"MONDO:0005575"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"familial colorectal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8533"],"synonyms":[{"name":"colorectal cancer, familial","type":"related"},{"name":"hereditary colorectal cancer","type":"exact"}],"termid":"MONDO:0023113","terms_by_termid":{"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0023113"}}}


id: FYPO:0004721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased rate of microtubule depolymerization at minus end (obsolete FYPO:0004721)","synonyms":[{"name":"decreased microtubule depolymerization rate at minus end","type":"exact"},{"name":"decreased microtubule minus end shrinkage","type":"related"},{"name":"decreased rate of microtubule catastrophe at minus end","type":"related"},{"name":"decreased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"decreased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"decreased rate of minus-end specific microtubule depolymerization","type":"exact"},{"name":"increased microtubule stability","type":"related"},{"name":"reduced rate of microtubule depolymerization at minus end","type":"exact"}],"termid":"FYPO:0004721"}


id: PBO:0091860
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure of SPNCRNA.113 used","termid":"PBO:0091860"}


id: MONDO:0700113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anaplasmataceae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease, non-human animal","termid":"MONDO:0700050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anaplasmataceae infectious disease, non-human animal","termid":"MONDO:0700113","xrefs":{"Monarch":{"xref_id":"0700113"}}}


id: GO:0021887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a hypothalamus neuron that releases gonadotrophin-releasing hormone.","definition_xrefs":["GOC:dgh","GO_REF:0000021","PMID:12626695","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron fate commitment","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron fate commitment","type":"related"}],"termid":"GO:0021887"}


id: GO:0052661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-propane-1,2-diol + NAD+ = (S)-lactaldehyde + NADH + H+.","definition_xrefs":["RHEA:15933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactaldehyde reductase activity","termid":"GO:0008912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"S-lactaldehyde reductase activity","secondary_identifiers":["MetaCyc:LACTALDREDUCT-RXN","KEGG_REACTION:R02258"],"synonyms":[{"name":"(S)-propane-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"L-lactaldehyde:propanediol oxidoreductase activity","type":"related"}],"termid":"GO:0052661"}


id: GO:1900618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot morphogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system morphogenesis","synonyms":[{"name":"regulation of shoot morphogenesis","type":"exact"}],"termid":"GO:1900618"}


id: MONDO:0010628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin M, level of","secondary_identifiers":["OMIM:308250","UMLS:C1839966","MEDGEN:327005"],"synonyms":[{"name":"immunoglobulin M, level of","type":"exact"}],"termid":"MONDO:0010628","xrefs":{"Monarch":{"xref_id":"0010628"}}}


id: GO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactosylceramides, Gal-beta-(1->4)-Glc-beta(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group. They are the precursors of both gangliosides and globosides.","definition_xrefs":["ISBN:0198506732","ISBN:0471586501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"},{"relation_name":"is_a","term_name":"lactosylceramide metabolic process","termid":"GO:0046478"},{"relation_name":"is_a","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lactosylceramide biosynthetic process","synonyms":[{"name":"lactosylceramide anabolism","type":"exact"},{"name":"lactosylceramide biosynthesis","type":"exact"},{"name":"lactosylceramide formation","type":"exact"},{"name":"lactosylceramide synthesis","type":"exact"}],"termid":"GO:0001572"}


id: GO:0071335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hair follicle cells, resulting in the expansion of a cell population.","definition_xrefs":["PMID:16086254","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle cell proliferation","termid":"GO:0071335"}


id: GO:0002761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid leukocyte differentiation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"regulates","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"}


id: MONDO:0006437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete superficial fibromatosis (obsolete MONDO:0006437)","termid":"MONDO:0006437","xrefs":{"Monarch":{"xref_id":"0006437"}}}


id: MONDO:0017538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Preaxial polydactyly of toes","termid":"MONDO:0017457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Preaxial polydactyly of toes, bilateral","secondary_identifiers":["MEDGEN:1741594","Orphanet:295177","UMLS:C5437916","icd11.foundation:3040646"],"synonyms":[{"name":"bifid great toes, bilateral","type":"exact"},{"name":"bifid halluces, bilateral","type":"exact"},{"name":"bifid hallux, bilateral","type":"exact"}],"termid":"MONDO:0017538","xrefs":{"Monarch":{"xref_id":"0017538"}}}


id: PBO:0082103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase with protein-unfoldase activity; subunit of polyUb-selective segregase complex involved in ERAD, INM-associated degradation (INMAD), mitotic spindle disassembly, macroautophagy, PMN, ribosome-associated degradation, ribophagy, homotypic ER membrane fusion, SCF complex disassembly, cell wall integrity, and telomerase regulation; mobilizes membrane-anchored transcription factors by regulated Ub/proteasome-dependent processing (RUP); human ortholog VCP complements a cdc48 mutant","termid":"PBO:0082103"}


id: PBO:0057918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3621","termid":"PBO:0057918"}


id: GO:1905069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an allantois over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:TermGenie","PMID:21470579","PMID:17440924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraembryonic membrane development","termid":"GO:1903867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantois development","synonyms":[{"name":"allantoic bud development","type":"related"}],"termid":"GO:1905069"}


id: GO:0055067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of monovalent inorganic cations within an organism or cell.","definition_xrefs":["GOC:ai","GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete monovalent inorganic cation homeostasis (obsolete GO:0055067)","termid":"GO:0055067"}


id: GO:0051111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-adenosine)-L-histidine (otherwise known as tau-AMP-histidine, tele-AMP-histidine) or peptidyl-3'-(phospho-5'-adenosine)-L-histidine (otherwise known as pi-AMP-histidine, pros-AMP-histidine).","definition_xrefs":["RESID:AA0371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine adenylylation","termid":"GO:0051111"}


id: MONDO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of cerebral palsy wherein spasticity is the exclusive impairment present.","definition_xrefs":["Wikipedia:Spastic_cerebral_palsy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral palsy","termid":"MONDO:0006497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic cerebral palsy","secondary_identifiers":["ICD9:344.89","NCIT:C116903","UMLS:C0338596","SCTID:230773005","DOID:0050669","MEDGEN:137905","icd11.foundation:1426032265"],"synonyms":[{"name":"hypertonic cerebral palsy","type":"related"}],"termid":"MONDO:0000396","xrefs":{"Monarch":{"xref_id":"0000396"}}}


id: PBO:0059117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monooxygenase DBH like 1","termid":"PBO:0059117"}


id: GO:0042162
data:
  {"annotated_genes":["SJAG_04863","SJAG_05214","SJAG_04245","SJAG_01698","SJAG_05979","SJAG_03092","SJAG_01777","SJAG_00939","SJAG_02212","SJAG_00112","SJAG_01720","SJAG_01677","SJAG_02362","SJAG_01378","SJAG_02194","SJAG_05372","SJAG_04372","SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69325,69560,69946,70226,74673,76896,78101,79536],"is_not":false,"summary":null,"term":"GO:0042162"},{"annotations":[89516,79937,73742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003691"},{"annotations":[76662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[62990,80004,107920,110172,79935,95829,111330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to a telomere, a specific structure at the end of a linear chromosome required for the integrity and maintenance of the end.","definition_xrefs":["GOC:jl","SO:0000624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific DNA binding","termid":"GO:0043565"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01720":null,"SJAG_01777":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03855":null,"SJAG_04245":null,"SJAG_04372":null,"SJAG_04863":null,"SJAG_05214":null,"SJAG_05372":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"telomeric DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"telomere binding","type":"exact"},{"name":"telomeric repeat binding","type":"exact"}],"termid":"GO:0042162","terms_by_termid":{"GO:0003691":null,"GO:0042162":null,"GO:0043047":null,"GO:0098505":null}}


id: GO:0010039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron ion","synonyms":[{"name":"response to iron","type":"exact"}],"termid":"GO:0010039"}


id: GO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tryptophan, catalyzed by the enzyme tryptophanase (EC:4.1.99.1).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptophan catabolic process, using tryptophanase (obsolete GO:0019443)","synonyms":[{"name":"tryptophan breakdown, using tryptophanase","type":"exact"},{"name":"tryptophan catabolic process, using tryptophanase","type":"exact"},{"name":"tryptophan degradation, using tryptophanase","type":"exact"}],"termid":"GO:0019443"}


id: PBO:0052646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 14","termid":"PBO:0052646"}


id: GO:1902977
data:
  {"annotated_genes":["SJAG_02607","SJAG_04995","SJAG_00327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71746,77934,57166],"is_not":false,"summary":null,"term":"GO:1902977"}]},"cv_name":"biological_process","definition":"Any DNA replication preinitiation complex assembly that is involved in mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_02607":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0006259","GO:0008150","GO:0007049","GO:0044085","GO:0006260"],"is_obsolete":false,"name":"mitotic DNA replication preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"DNA replication preinitiation complex formation involved in mitotic cell cycle","type":"exact"},{"name":"pre-IC complex assembly involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1902977","terms_by_termid":{"GO:1902977":null}}


id: PBO:0044963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7C","termid":"PBO:0044963"}


id: GO:0140542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a piRNA.","definition_xrefs":["PMID:28847004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"piRNA transcription","termid":"GO:0140541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"regulation of piRNA transcription","termid":"GO:0140542"}


id: GO:0010970
data:
  {"annotated_genes":["SJAG_00851","SJAG_01775","SJAG_01371","SJAG_02651","SJAG_04143","SJAG_05220","SJAG_01613","SJAG_01546","SJAG_02431","SJAG_01370","SJAG_00918","SJAG_02761","SJAG_02731","SJAG_05185","SJAG_02286","SJAG_00594","SJAG_00140","SJAG_00397","SJAG_01211","SJAG_03673","SJAG_03437","SJAG_00332","SJAG_03540","SJAG_04001","SJAG_00368","SJAG_05319","SJAG_03073","SJAG_01224","SJAG_00113","SJAG_02336","SJAG_01297","SJAG_02561","SJAG_02737","SJAG_05266","SJAG_01662","SJAG_01863","SJAG_02045","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90906],"is_not":false,"summary":null,"term":"GO:0010970"},{"annotations":[87502,91141,103046,110846,91600,100514,90749,94966,111200,113749,97352,102753,116751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[111023,101219,106387],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[97427,99021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[87506,99022,97354,76124,91143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[94173],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[103536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[100174,118476,108067,103691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[100308,108688,98411,116725,88889,113901,96546,89494,109694,90737,107305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[104668,104335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The movement of organelles or other particles from one location in the cell to another along microtubules, driven by motor activity.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"cytoskeleton-dependent intracellular transport","termid":"GO:0030705"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"transport along microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of localization by movement along microtubule","type":"exact"},{"name":"microtubule-based transport","type":"broad"},{"name":"movement along microtubule","type":"exact"}],"termid":"GO:0010970","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: PBO:0053340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 208","termid":"PBO:0053340"}


id: GO:0044178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the host cell Golgi apparatus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endomembrane system","termid":"GO:0033645"},{"relation_name":"part_of","term_name":"host cell Golgi apparatus","termid":"GO:0044177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Golgi membrane","synonyms":[{"name":"host Golgi membrane","type":"exact"}],"termid":"GO:0044178"}


id: GO:0045307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Activates the establishment of competence for transformation.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete activator of the establishment of competence for transformation activity (obsolete GO:0045307)","synonyms":[{"name":"activator of the establishment of competence for transformation activity","type":"exact"}],"termid":"GO:0045307"}


id: PBO:0031648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G2_phase_progression","termid":"PBO:0031648"}


id: PBO:0017637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein Mpd1 (predicted)","termid":"PBO:0017637"}


id: PBO:0058488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5682","termid":"PBO:0058488"}


id: GO:0008986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + pyruvate = AMP + 2 H+ + phosphate + phosphoenolpyruvate.","definition_xrefs":["RHEA:11364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"pyruvate, water dikinase activity","secondary_identifiers":["KEGG_REACTION:R00199","EC:2.7.9.2","MetaCyc:PEPSYNTH-RXN"],"synonyms":[{"name":"ATP:pyruvate, water phosphotransferase activity","type":"related"},{"name":"PEP synthase activity","type":"exact"},{"name":"PEP synthetase activity","type":"related"},{"name":"phoephoenolpyruvate synthetase activity","type":"related"},{"name":"phosphoenolpyruvate synthase activity","type":"related"},{"name":"phosphoenolpyruvic synthase activity","type":"related"},{"name":"phosphopyruvate synthetase activity","type":"related"},{"name":"pyruvate,water dikinase activity","type":"related"},{"name":"pyruvate-water dikinase (phosphorylating)","type":"related"},{"name":"water pyruvate dikinase activity","type":"exact"}],"termid":"GO:0008986"}


id: PBO:0032735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu43","termid":"PBO:0032735"}


id: MONDO:0006193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Simple or complex endometrial hyperplasia characterized by the absence of epithelial atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial hyperplasia without atypia","secondary_identifiers":["SCTID:134031000119108","UMLS:C1516855","ICD9:621.34","MEDGEN:274011","EFO:1000234","NCIT:C40157"],"synonyms":[{"name":"typical endometrial hyperplasia","type":"exact"}],"termid":"MONDO:0006193","xrefs":{"Monarch":{"xref_id":"0006193"}}}


id: GO:0034667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha3 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alpha3-beta1 complex","synonyms":[{"name":"ITGA3-ITGB1 complex","type":"narrow"},{"name":"VLA-3 complex","type":"exact"},{"name":"alpha3-beta1 integrin complex","type":"exact"}],"termid":"GO:0034667"}


id: SO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that has been generated to act as a vector for foreign sequence.","direct_ancestors":[{"relation_name":"derives_from","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid_vector","secondary_identifiers":["http://en.wikipedia.org/wiki/Plasmid_vector#Vectors"],"synonyms":[{"name":"plasmid vector","type":"exact"}],"termid":"SO:0000755"}


id: PBO:0060488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 10","termid":"PBO:0060488"}


id: MONDO:0030902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 36","secondary_identifiers":["MEDGEN:1773965","UMLS:C5436935","GARD:16431","OMIM:619170"],"synonyms":[{"name":"MC1DN36","type":"exact"},{"name":"mitochondrial complex 1 deficiency, nuclear type 36","type":"exact"},{"name":"mitochondrial complex I deficiency, nuclear type 36","type":"exact"}],"termid":"MONDO:0030902","xrefs":{"Monarch":{"xref_id":"0030902"}}}


id: GO:0018846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: styrene oxide = phenylacetaldehyde.","definition_xrefs":["RHEA:21604","EC:5.3.99.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"styrene-oxide isomerase activity","secondary_identifiers":["UM-BBD_reactionID:r0034","KEGG_REACTION:R02615","MetaCyc:STYRENE-OXIDE-ISOMERASE-RXN"],"synonyms":[{"name":"SOI activity","type":"related"},{"name":"styrene oxide isomerase activity","type":"exact"},{"name":"styrene-oxide isomerase (epoxide-cleaving)","type":"related"}],"termid":"GO:0018846"}


id: MOD:00246
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue to form glycine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:8183941","RESID:AA0241","ChEBI:21276","PubMed:8895467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"glycine thiazole-4-carboxylic acid","synonyms":[{"name":"2-(aminomethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-(azanylmethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Gly-Cys)","type":"exact"},{"name":"glycine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00246"}


id: FYPO:0007441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to endoplasmic reticulum-plasma membrane contact sites is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:32320462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to endoplasmic reticulum-plasma membrane contact site","synonyms":[{"name":"normal protein localization to ER-plasma membrane contact site","type":"exact"},{"name":"normal protein localization to endoplasmic reticulum-plasma membrane contact site during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endoplasmic reticulum-plasma membrane contact site during vegetative growth","type":"exact"}],"termid":"FYPO:0007441"}


id: GO:0015846
data:
  {"annotated_genes":["SJAG_04469","SJAG_02125","SJAG_02060","SJAG_02059","SJAG_02344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015847"},{"annotations":[106189],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902267"},{"annotations":[57717,117159,110728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[68512,117160,110729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The directed movement of polyamines, organic compounds containing two or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"polyamine transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015846","terms_by_termid":{"GO:0015847":null,"GO:1902267":null,"GO:1903710":null,"GO:1903711":null}}


id: GO:0060268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of respiratory burst","termid":"GO:0060263"},{"relation_name":"negatively_regulates","term_name":"respiratory burst","termid":"GO:0045730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of respiratory burst","termid":"GO:0060268"}


id: PBO:0063962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase like 1","termid":"PBO:0063962"}


id: GO:1900765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"emericellin metabolic process","termid":"GO:1900764"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"emericellin catabolic process","synonyms":[{"name":"Variecoxanthone B breakdown","type":"related"},{"name":"Variecoxanthone B catabolic process","type":"related"},{"name":"Variecoxanthone B catabolism","type":"related"},{"name":"Variecoxanthone B degradation","type":"related"},{"name":"emericellin breakdown","type":"exact"},{"name":"emericellin catabolism","type":"exact"},{"name":"emericellin degradation","type":"exact"}],"termid":"GO:1900765"}


id: GO:0070367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of hepatocyte differentiation","termid":"GO:0070366"},{"relation_name":"negatively_regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte differentiation","synonyms":[{"name":"down regulation of hepatocyte differentiation","type":"exact"},{"name":"down-regulation of hepatocyte differentiation","type":"exact"},{"name":"downregulation of hepatocyte differentiation","type":"exact"},{"name":"inhibition of hepatocyte differentiation","type":"narrow"},{"name":"negative regulation of liver cell differentiation","type":"exact"}],"termid":"GO:0070367"}


id: GO:1904135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in rhombomere morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in rhombomere morphogenesis","termid":"GO:1904133"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in rhombomere morphogenesis","termid":"GO:1904125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in rhombomere morphogenesis","synonyms":[{"name":"activation of convergent extension involved in rhombomere morphogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in rhombomere morphogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in rhombomere morphogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in rhombomere morphogenesis","type":"exact"}],"termid":"GO:1904135"}


id: PBO:0084473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATalpha-specific a-factor blocker; contributes to mating efficiency under certain conditions; localizes to the cell wall; predicted to be a GPI-attached protein; upregulated by Mcm1p-Alpha1p transcription factor; partially overlaps the dubious ORF YLR041W","termid":"PBO:0084473"}


id: PBO:0086571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPR053C is not an essential gene; partially overlaps verified ORF NHP6A/YPR052C","termid":"PBO:0086571"}


id: PBO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoglycerate_mutase_activity","termid":"PBO:0030066"}


id: GO:0002738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell cytokine production","termid":"GO:0002732"},{"relation_name":"is_a","term_name":"regulation of plasmacytoid dendritic cell cytokine production","termid":"GO:0002736"},{"relation_name":"positively_regulates","term_name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasmacytoid dendritic cell cytokine production","synonyms":[{"name":"activation of plasmacytoid dendritic cell cytokine production","type":"narrow"},{"name":"stimulation of plasmacytoid dendritic cell cytokine production","type":"narrow"},{"name":"up regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"up-regulation of plasmacytoid dendritic cell cytokine production","type":"exact"},{"name":"upregulation of plasmacytoid dendritic cell cytokine production","type":"exact"}],"termid":"GO:0002738"}


id: PBO:0071621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 39","termid":"PBO:0071621"}


id: MONDO:0017501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of both lower leg and foot","termid":"MONDO:0017444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both lower leg and foot, bilateral","secondary_identifiers":["MEDGEN:1759560","Orphanet:295099","UMLS:C2910300","ICD10CM:Q72.23","icd11.foundation:113051911"],"synonyms":[{"name":"tibiofibular terminal transverse meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017501","xrefs":{"Monarch":{"xref_id":"0017501"}}}


id: PBO:0034441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere-telomerase_complex_assembly","termid":"PBO:0034441"}


id: MONDO:0020466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Turner syndrome","termid":"MONDO:0019499"},{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"monosomy X","secondary_identifiers":["SCTID:710008008","icd11.foundation:95979116","GARD:19676","MEDGEN:116607","Orphanet:99226","UMLS:C0242526","NCIT:C36630"],"synonyms":[{"name":"monosomy type X","type":"exact"}],"termid":"MONDO:0020466","xrefs":{"Monarch":{"xref_id":"0020466"}}}


id: GO:0045105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly or disassembly of intermediate filaments by the addition or removal of component parts from a filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"},{"relation_name":"part_of","term_name":"intermediate filament cytoskeleton organization","termid":"GO:0045104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"intermediate filament polymerization or depolymerization","termid":"GO:0045105"}


id: FYPO:0005168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during cellular response to salt stress","synonyms":[{"name":"normal protein accumulation during cellular response to salt stress","type":"related"},{"name":"normal protein level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0005168"}


id: PBO:0002393
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Damage Assistance Protein","termid":"PBO:0002393"}


id: PBO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-associated cyclin-dependent protein kinase Lsk1","termid":"PBO:0002304"}


id: PBO:0031756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromere","termid":"PBO:0031756"}


id: GO:0031597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome complex found in the cytosol of a cell.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"cytosolic proteasome complex","termid":"GO:0031597"}


id: PBO:0075672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 3","termid":"PBO:0075672"}


id: PBO:0082686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; links the (VFT/GARP) complex to the SNARE Tlg1p; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p","termid":"PBO:0082686"}


id: PBO:0051306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR-4 (pseudogene)","termid":"PBO:0051306"}


id: GO:1901518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aspyridone A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"aspyridone A metabolic process","termid":"GO:1901516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone A biosynthetic process","synonyms":[{"name":"aspyridone A anabolism","type":"exact"},{"name":"aspyridone A biosynthesis","type":"exact"},{"name":"aspyridone A formation","type":"exact"},{"name":"aspyridone A synthesis","type":"exact"}],"termid":"GO:1901518"}


id: GO:0031504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the peptidoglycan-based cell wall.","definition_xrefs":["GOC:jl","GOC:mtg_sensu","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"peptidoglycan-based cell wall organization","synonyms":[{"name":"peptidoglycan-based cell wall organisation","type":"exact"},{"name":"peptidoglycan-based cell wall organization and biogenesis","type":"related"}],"termid":"GO:0031504"}


id: PBO:0041846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASK antisense RNA 1","termid":"PBO:0041846"}


id: PBO:0080192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox","termid":"PBO:0080192"}


id: MONDO:0013602
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85597],"is_not":false,"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"Any paraganglioma in which the cause of the disease is a mutation in the SDHA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"},{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"},{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"hereditary pheochromocytoma-paraganglioma","termid":"MONDO:0017366"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paragangliomas 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:481622","UMLS:C3279992","GARD:15763","OMIM:614165"],"synonyms":[{"name":"PGL5","type":"related"},{"name":"SDHA paraganglioma","type":"exact"},{"name":"paraganglioma caused by mutation in SDHA","type":"exact"},{"name":"paragangliomas 5","type":"exact"},{"name":"paragangliomas type 5","type":"exact"}],"termid":"MONDO:0013602","terms_by_termid":{"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0013602"}}}


id: SO:0000602
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short 3'-uridylated RNA that can form a duplex (except for its post-transcriptionally added oligo_U tail (SO:0000609)) with a stretch of mature edited mRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guide_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Guide_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:guide_RNA","type":"exact"},{"name":"gRNA","type":"exact"},{"name":"guide RNA","type":"exact"}],"termid":"SO:0000602"}


id: MONDO:0032917
data:
  {"annotated_genes":["SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86464],"is_not":false,"summary":null,"term":"MONDO:0032917"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 76","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1710038","GARD:18154","UMLS:C5394080","OMIM:618787","DOID:0112167"],"synonyms":[{"name":"DEAFNESS, AUTOSOMAL DOMINANT 76","type":"narrow"},{"name":"DFNA76","type":"narrow"},{"name":"deafness, autosomal dominant 76","type":"narrow"}],"termid":"MONDO:0032917","terms_by_termid":{"MONDO:0032917":null},"xrefs":{"Monarch":{"xref_id":"0032917"}}}


id: PBO:0063607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4 variant 1","termid":"PBO:0063607"}


id: GO:1990900
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A constriction site at the junction of the plasma, flagellar and flagellar pocket membranes where the flagellum emerges from the cell body. Observed in some unicellular eukaryotic species such as Chlamydomonas, Giardia and Trypanosoma.","definition_xrefs":["PMID:18462016","GOC:giardia","PMID:19806154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ciliary pocket","termid":"GO:0020016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary pocket collar","synonyms":[{"name":"FPC","type":"related"},{"name":"cilium pocket collar","type":"exact"},{"name":"flagellar collar","type":"related"},{"name":"flagellar pocket collar","type":"exact"},{"name":"flagellar pore","type":"related"},{"name":"flagellum pocket collar","type":"exact"}],"termid":"GO:1990900"}


id: PBO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteome hyperlink","termid":"PBO:0001051"}


id: MONDO:0003277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the ear. Representative examples include ceruminous adenocarcinoma and squamous cell carcinoma of the external ear and adenocarcinoma of the middle ear.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant ear neoplasm","secondary_identifiers":["SCTID:443648003","DOID:5101","UMLS:C2350059","MEDGEN:418247","MESH:D004428","NCIT:C9337"],"synonyms":[{"name":"auricular cancer","type":"related"},{"name":"cancer of ear","type":"exact"},{"name":"ear cancer","type":"exact"},{"name":"malignant Ear neoplasm","type":"exact"},{"name":"malignant Ear tumor","type":"exact"},{"name":"malignant Ear tumour","type":"exact"},{"name":"malignant ear neoplasm","type":"exact"},{"name":"malignant neoplasm of Ear","type":"exact"},{"name":"malignant neoplasm of ear","type":"exact"},{"name":"malignant neoplasm of the Ear","type":"exact"},{"name":"malignant tumor of Ear","type":"exact"},{"name":"malignant tumor of ear","type":"exact"},{"name":"malignant tumor of the Ear","type":"exact"},{"name":"malignant tumour of Ear","type":"exact"},{"name":"malignant tumour of ear","type":"exact"},{"name":"malignant tumour of the Ear","type":"exact"}],"termid":"MONDO:0003277","xrefs":{"Monarch":{"xref_id":"0003277"}}}


id: PR:Q9Y719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.05","synonyms":[{"name":"Spom972h-mok13","type":"exact"}],"termid":"PR:Q9Y719"}


id: GO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microglial cell activation","termid":"GO:0001774"},{"relation_name":"is_a","term_name":"macrophage activation involved in immune response","termid":"GO:0002281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell activation involved in immune response","synonyms":[{"name":"microglial cell activation during immune response","type":"related"}],"termid":"GO:0002282"}


id: MONDO:0005686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bunyaviridae infectious disease (obsolete MONDO:0005686)","termid":"MONDO:0005686","xrefs":{"Monarch":{"xref_id":"0005686"}}}


id: MONDO:0015820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous lymphoma","termid":"MONDO:0018898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous B-cell lymphoma","secondary_identifiers":["MEDGEN:697651","Orphanet:178563","SCTID:402881008","ICD9:202.80","GARD:20165","UMLS:C1274310"],"termid":"MONDO:0015820","xrefs":{"Monarch":{"xref_id":"0015820"}}}


id: GO:0044879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signaling process that contributes to a mitotic cell cycle checkpoint which delays mitotic onset in response to perturbations that affect cell shape via the actin cytoskeleton, septin organization, small cell size, and/or the extent of membrane growth.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitotic morphogenesis checkpoint signaling","secondary_identifiers":["GO:1903822"],"synonyms":[{"name":"morphogenesis checkpoint","type":"exact"},{"name":"septin checkpoint","type":"exact"},{"name":"signal transduction involved in morphogenesis checkpoint","type":"exact"},{"name":"signal transduction involved in septin checkpoint","type":"exact"},{"name":"signaling cascade involved in morphogenesis checkpoint","type":"exact"},{"name":"signaling cascade involved in septin checkpoint","type":"exact"},{"name":"signaling pathway involved in morphogenesis checkpoint","type":"exact"},{"name":"signaling pathway involved in septin checkpoint","type":"exact"},{"name":"signalling cascade involved in morphogenesis checkpoint","type":"exact"},{"name":"signalling cascade involved in septin checkpoint","type":"exact"},{"name":"signalling pathway involved in morphogenesis checkpoint","type":"exact"},{"name":"signalling pathway involved in septin checkpoint","type":"exact"}],"termid":"GO:0044879"}


id: PR:Q09775
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX52 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00269","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase rok1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.08c","secondary_identifiers":["UniProtKB:Q09775"],"synonyms":[{"name":"Spom972h-DDX52","type":"exact"}],"termid":"PR:Q09775"}


id: PBO:0090243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7","termid":"PBO:0090243"}


id: GO:0047214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin-3-O-D-rhamnosyl-(1,6)-D-glucoside + UDP-D-glucose = cyanidin-3-O-[D-rhamnosyl-(1,6)-D-glucoside]-5-O-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.116-RXN","EC:2.4.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cyanidin-3-rhamnosylglucoside 5-O-glucosyltransferase activity","secondary_identifiers":["RHEA:12144"],"synonyms":[{"name":"UDP-glucose:cyanidin-3-O-D-rhamnosyl-1,6-D-glucoside 5-O-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:cyanidin-3-O-beta-L-rhamnosyl-(1->6)-beta-D-glucoside 5-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"cyanidin-3-O-rutinoside 5-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-cyanidin 3-rhamnosylglucoside 5-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047214"}


id: GO:1904609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium L-glutamate stimulus.","definition_xrefs":["PMID:21389115","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to monosodium L-glutamate (obsolete GO:1904609)","termid":"GO:1904609"}


id: PBO:0057733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1321","termid":"PBO:0057733"}


id: PR:Q9P7F2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cao1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.04","synonyms":[{"name":"Spom972h-cao1","type":"exact"}],"termid":"PR:Q9P7F2"}


id: PBO:0088322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate reductase Osm1","termid":"PBO:0088322"}


id: PBO:0053307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-28 homolog B","termid":"PBO:0053307"}


id: PBO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC12 antisense RNA 1","termid":"PBO:0060192"}


id: RO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has subsequence y iff all of the sequence parts of x are sequence parts of y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"bounds_sequence_of","termid":"RO:0002522"},{"relation_name":"is_a","term_name":"overlaps_sequence_of","termid":"RO:0002526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_subsequence","termid":"RO:0002524"}


id: PBO:0044760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 43 pseudogene 1","termid":"PBO:0044760"}


id: GO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n 3'-phosphoadenylyl sulfate + dermatan = n adenosine 3',5'-bisphosphate + dermatan 4'-sulfate + n H+.","definition_xrefs":["RHEA:48052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatan sulfotransferase activity","termid":"GO:0120534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"dermatan 4-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-6786034","EC:2.8.2.35","Reactome:R-HSA-2022063","Reactome:R-HSA-3636919"],"synonyms":[{"name":"N-acetylgalactosamine 4-O-sulfotransferase activity","type":"related"},{"name":"N-acetylgalactosamine 4-O-sulphotransferase activity","type":"related"}],"termid":"GO:0001537"}


id: PBO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_nitrogen_starvation","termid":"PBO:0035776"}


id: MOD:00470
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS-LC-Biotin","synonyms":[{"name":"NHS-LC-Biotin","type":"related"}],"termid":"MOD:00470"}


id: MOD:02032
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex(2) Hex(4) HexNAc(5)","definition_xrefs":["Unimod:1785","PubMed:33135055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dHex2Hex4HexNAc5 N4-glycosylated asparagine","synonyms":[{"name":"dHex(2) Hex(4) HexNAc(5)","type":"related"}],"termid":"MOD:02032"}


id: GO:0008547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. A GTPase involved in protein synthesis. In the initiation factor complex, it is IF-2b (98 kDa) that binds GTP and subsequently hydrolyzes it in prokaryotes. In eukaryotes, it is eIF-2 (150 kDa) that binds GTP. In the elongation phase, the GTP-hydrolyzing proteins are the EF-Tu polypeptide of the prokaryotic transfer factor (43 kDa), the eukaryotic elongation factor EF-1a (53 kDa), the prokaryotic EF-G (77 kDa), the eukaryotic EF-2 (70-110 kDa) and the signal recognition particle that play a role in endoplasmic reticulum protein synthesis (325 kDa). EF-Tu and EF1a catalyze binding of aminoacyl-tRNA to the ribosomal A-site, while EF-G and EF-2 catalyze the translocation of peptidyl-tRNA from the A-site to the P-site. GTPase activity is also involved in polypeptide release from the ribosome with the aid of the pRFs and eRFs.","definition_xrefs":["EC:3.6.5.3","MetaCyc:3.6.1.48-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-synthesizing GTPase activity (obsolete GO:0008547)","synonyms":[{"name":"protein-synthesizing GTPase activity","type":"exact"}],"termid":"GO:0008547"}


id: GO:0043530
data:
  {"annotated_genes":["SJAG_01231"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114497],"is_not":false,"summary":null,"term":"GO:0043530"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 5'-monophosphoramidate + H2O = AMP + NH4+. Other substrates include AMP-morpholidate, AMP-N-alanine methyl ester and AMP-alpha-acetyl lysine methyl ester.","definition_xrefs":["PMID:11805111","RHEA:67916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"adenosine 5'-monophosphoramidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5' monophosphoramidase activity","type":"exact"},{"name":"adenosine 5'-monophosphoramidate hydrolase activity","type":"exact"}],"termid":"GO:0043530","terms_by_termid":{"GO:0043530":null}}


id: PBO:0087821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (48 kDa); involved in RNA polymerase II transcription initiation; potential Cdc28p substrate","termid":"PBO:0087821"}


id: MONDO:0013636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary biliary cholangitis","termid":"MONDO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0019303","MONDO:0002515"],"is_obsolete":false,"name":"primary biliary cholangitis 4","secondary_identifiers":["GARD:15776","UMLS:C3280201","DOID:0070361","MEDGEN:481831","OMIM:614220"],"synonyms":[{"name":"PBC4","type":"related"},{"name":"biliary cirrhosis, primary, 4","type":"related"}],"termid":"MONDO:0013636","xrefs":{"Monarch":{"xref_id":"0013636"}}}


id: FYPO:0003274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing S-nitrosoglutathione (GSNO).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on GSNO","synonyms":[{"name":"normal cell population growth in presence of GSNO","type":"exact"},{"name":"normal cell population growth on GSNO","type":"exact"},{"name":"normal cell population growth on S-nitrosoglutathione","type":"exact"},{"name":"normal cellular response to GSNO","type":"related"},{"name":"normal vegetative cell population growth on GSNO","type":"exact"}],"termid":"FYPO:0003274"}


id: PBO:0013838
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoPantothenate-Cysteine","termid":"PBO:0013838"}


id: PBO:0085871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; homologous to the medium chain of mammalian clathrin-associated protein complex; involved in vesicular transport","termid":"PBO:0085871"}


id: PBO:0078499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 2-2","termid":"PBO:0078499"}


id: MONDO:0014912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"infantile-onset periodic fever-panniculitis-dermatosis syndrome","secondary_identifiers":["SCTID:765435009","DOID:0080163","GARD:13198","UMLS:C4310614","MEDGEN:934581","OMIM:617099","Orphanet:500062"],"synonyms":[{"name":"AIPDS","type":"exact"},{"name":"AUTOINFLAMMATION, panniculitis, and dermatosis syndrome","type":"related"},{"name":"Autoinflammation, panniculitis, and dermatosis syndrome","type":"exact"},{"name":"ORAS","type":"exact"},{"name":"autoinflammation, panniculitis and dermatosis syndrome","type":"exact"},{"name":"otulin deficiency","type":"exact"},{"name":"otulin-related autoinflammatory syndrome","type":"exact"},{"name":"otulipenia","type":"exact"}],"termid":"MONDO:0014912","xrefs":{"Monarch":{"xref_id":"0014912"}}}


id: PBO:0029624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029624"}


id: MONDO:0957495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemolytic uremic syndrome","termid":"MONDO:0957097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemolytic uremic syndrome, atypical, 8, with rhizomelic short stature","secondary_identifiers":["OMIM:301110","UMLS:C5829585","MEDGEN:1840221"],"termid":"MONDO:0957495","xrefs":{"Monarch":{"xref_id":"0957495"}}}


id: GO:1904724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane-enclosed lumen that is part of a tertiary granule.","definition_xrefs":["GOC:TermGenie","PMID:23650620","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"tertiary granule","termid":"GO:0070820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"tertiary granule lumen","synonyms":[{"name":"gelatinase granule membrane-enclosed lumen","type":"related"},{"name":"membrane-enclosed lumen of gelatinase granule","type":"exact"},{"name":"membrane-enclosed lumen of tertiary granule","type":"exact"},{"name":"tertiary granule membrane-enclosed lumen","type":"exact"}],"termid":"GO:1904724"}


id: GO:1905492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of branching morphogenesis of a nerve.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16516839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of branching morphogenesis of a nerve","termid":"GO:2000172"},{"relation_name":"positively_regulates","term_name":"branching morphogenesis of a nerve","termid":"GO:0048755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of branching morphogenesis of a nerve","synonyms":[{"name":"activation of branching morphogenesis of a nerve","type":"narrow"},{"name":"up regulation of branching morphogenesis of a nerve","type":"exact"},{"name":"up-regulation of branching morphogenesis of a nerve","type":"exact"},{"name":"upregulation of branching morphogenesis of a nerve","type":"exact"}],"termid":"GO:1905492"}


id: PBO:0004994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum membrane protein involved in assembly of the V-ATPase (predicted)","termid":"PBO:0004994"}


id: FYPO:0007302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect when the cell is subject to heat shock. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"protein absent from cell during heat shock","synonyms":[{"name":"protein absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"protein absent from cell during heat shock during vegetative growth","type":"exact"},{"name":"undetectable cellular protein level during heat shock","type":"exact"}],"termid":"FYPO:0007302"}


id: PBO:0027378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_fragmented_nuclear_envelope_during_mitotic_telophase","termid":"PBO:0027378"}


id: MOD:01480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 5'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-fluoro-L-tryptophan","synonyms":[{"name":"5-fluorotryptophan","type":"exact"}],"termid":"MOD:01480"}


id: GO:0061650
data:
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id: GO:0042835
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id: PBO:0085349
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id: GO:1902868
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id: PBO:0064493
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id: PBO:0076516
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id: GO:0006811
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id: PBO:0045025
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id: MONDO:0060724
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id: GO:0045972
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id: GO:0046973
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id: PBO:0074673
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id: PBO:0034793
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id: SO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes polyadenylation with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_processing_variant","termid":"SO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylation_variant","synonyms":[{"name":"polyadenylation variant","type":"exact"}],"termid":"SO:0001545"}


id: PBO:0056159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACROD2 intronic transcript 1","termid":"PBO:0056159"}


id: GO:0042899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arabinan is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transport","termid":"GO:0015774"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"arabinan transmembrane transport","synonyms":[{"name":"arabinan transport","type":"related"}],"termid":"GO:0042899"}


id: PBO:0068776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 13, pseudogene","termid":"PBO:0068776"}


id: PBO:0087673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p; stimulates the GTPase activity of Rag family GTPase Gtr2p, within the context of the Gtr1p-Gtr2p heterodimer, after amino acid stimulation; required for activation of TORC1 in response to amino acid stimulation; recruited to the vacuolar membrane during amino acid starvation and released from the membrane by TORC1; required for the transport of amino acid permease Gap1p from the Golgi to the cell surface","termid":"PBO:0087673"}


id: PBO:0081696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 619","termid":"PBO:0081696"}


id: PBO:0050881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta isomerase 2","termid":"PBO:0050881"}


id: GO:0015877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of biopterin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Biopterin is a growth factor for certain protozoans and some insects; it is widely distributed in tissues and functions in a reduced form, tetrahydrobiopterin, as a hydroxylation coenzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"biopterin transport","termid":"GO:0015877"}


id: PBO:0080061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP30 antisense RNA 1","termid":"PBO:0080061"}


id: PBO:0079693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 1","termid":"PBO:0079693"}


id: PBO:0031001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mercaptoethanol","termid":"PBO:0031001"}


id: PBO:0091828
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Increased Maximal permissive temperature for Pim1","termid":"PBO:0091828"}


id: PBO:0029464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_vegetative_cell","termid":"PBO:0029464"}


id: PBO:0042444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42EP3 antisense RNA 1","termid":"PBO:0042444"}


id: PBO:0048634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 3","termid":"PBO:0048634"}


id: GO:0016582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration of DNA or protein in chromatin by the non-covalent addition or removal of chemical groups.","definition_xrefs":["GOC:jl","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete non-covalent chromatin modification (obsolete GO:0016582)","termid":"GO:0016582"}


id: PBO:0056141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor 2","termid":"PBO:0056141"}


id: MONDO:0800388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to cardiac glycoside.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac glycoside intoxication","synonyms":[{"name":"cardiac glycoside poisoning","type":"exact"},{"name":"digitalis intoxication","type":"narrow"},{"name":"digitalis toxicity","type":"narrow"}],"termid":"MONDO:0800388","xrefs":{"Monarch":{"xref_id":"0800388"}}}


id: MONDO:0008451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant neurodegenerative disorder characterized by juvenile onset, distal motor weakness without sensory impairment, and anterior horn cell degeneration.","definition_xrefs":["NCIT:C132826"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuronopathy, distal hereditary motor (obsolete MONDO:0000075)","termid":"MONDO:0000075"},{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant 1","secondary_identifiers":["UMLS:C1866784","DOID:0111200","GARD:16953","Orphanet:139518","MESH:C566675","MEDGEN:356618","OMIM:182960"],"synonyms":[{"name":"Charcot-Marie-Tooth disease, spinal, 1","type":"related"},{"name":"Charcot-Marie-Tooth disease, spinal, I","type":"exact"},{"name":"DHMN1","type":"exact"},{"name":"HMN 1","type":"related"},{"name":"HMN1","type":"related"},{"name":"autosomal dominant distal juvenile spinal muscular atrophy type 1","type":"exact"},{"name":"dHMN1","type":"exact"},{"name":"distal hereditary motor neuronopathy type I","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type 1","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type I","type":"related"},{"name":"neuropathy, distal hereditary motor, type 1","type":"related"},{"name":"spinal muscular atrophy, distal, juvenile, autosomal dominant, 1","type":"related"}],"termid":"MONDO:0008451","xrefs":{"Monarch":{"xref_id":"0008451"}}}


id: GO:0030125
data:
  {"annotated_genes":["SJAG_02805","SJAG_00104","SJAG_04565","SJAG_01167","SJAG_02282","SJAG_02177","SJAG_04609","SJAG_00800","SJAG_04644","SJAG_04517","SJAG_00379","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73499,79510],"is_not":false,"summary":null,"term":"GO:0030125"},{"annotations":[61895,112581,77525,112797],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[108131,77844,58188,74074],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[65172,58434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"}]},"cv_name":"cellular_component","definition":"A clathrin coat found on a vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat","termid":"GO:0030118"},{"relation_name":"is_a","term_name":"vesicle coat","termid":"GO:0030120"},{"relation_name":"part_of","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin vesicle coat","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030125","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null}}


id: MONDO:0026426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X inactivation, familial skewed","termid":"MONDO:0100209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X inactivation, familial skewed, 2","secondary_identifiers":["OMIM:300179","MEDGEN:335376","MESH:C564572","UMLS:C1846257"],"synonyms":[{"name":"SXI2","type":"related"},{"name":"X INACTIVATION, FAMILIAL SKEWED, 2","type":"related"},{"name":"X-inactivation, familial skewed, 2","type":"exact"}],"termid":"MONDO:0026426","xrefs":{"Monarch":{"xref_id":"0026426"}}}


id: GO:0003192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the mitral valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve formation","termid":"GO:0003190"},{"relation_name":"part_of","term_name":"mitral valve morphogenesis","termid":"GO:0003183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitral valve formation","termid":"GO:0003192"}


id: MONDO:0005985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the togaviridae.","definition_xrefs":["MESH:D014036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Togaviridae infectious disease","secondary_identifiers":["UMLS:C0040361","MEDGEN:21575"],"synonyms":[{"name":"Togaviridae caused disease or disorder","type":"exact"},{"name":"Togaviridae disease or disorder","type":"exact"}],"termid":"MONDO:0005985","xrefs":{"Monarch":{"xref_id":"0005985"}}}


id: PBO:0065246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 18","termid":"PBO:0065246"}


id: PBO:0055343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2771","termid":"PBO:0055343"}


id: PBO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit (predicted)","termid":"PBO:0002599"}


id: GO:0033236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD+ = an 11-oxosteroid + NADH + H+.","definition_xrefs":["PMID:15761036"],"gene_count":0,"genotype_count":0,"name":"obsolete 11-beta-hydroxysteroid dehydrogenase (NAD+) activity (obsolete GO:0033236)","synonyms":[{"name":"11-beta-hydroxysteroid dehydrogenase (NAD+) activity","type":"exact"}],"termid":"GO:0033236"}


id: PBO:0083591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF Q0010","termid":"PBO:0083591"}


id: MOD:01743
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-128 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"derives_from","term_name":"cysTMT6plex-128 reporter+balance reagent cysteine disulfide","termid":"MOD:01825"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-128 reporter fragment","type":"exact"}],"termid":"MOD:01743"}


id: PBO:0076791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon and delta complex 1","termid":"PBO:0076791"}


id: GO:0034026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an L-amino acid + an L-amino acid = ADP + phosphate + L-aminoacyl-L-amino acid.","definition_xrefs":["EC:6.3.2.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-amino-acid alpha-ligase activity","secondary_identifiers":["MetaCyc:RXN-16296","RHEA:44332"],"synonyms":[{"name":"L-amino acid alpha-ligase activity","type":"exact"},{"name":"L-amino acid ligase activity","type":"exact"},{"name":"YwfE","type":"related"},{"name":"bacilysin synthetase activity","type":"exact"}],"termid":"GO:0034026"}


id: SO:0001716
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone modification site where ubiquitin may be added.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_modification","termid":"SO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_ubiqitination_site","synonyms":[{"name":"histone ubiquitination site","type":"related"}],"termid":"SO:0001716"}


id: PBO:0039524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 5","termid":"PBO:0039524"}


id: MONDO:0015117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of hepatobiliary neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare hepatic and biliary tract tumor (obsolete MONDO:0015117)","secondary_identifiers":["Orphanet:101943"],"synonyms":[{"name":"rare hepatobiliary neoplasm","type":"exact"}],"termid":"MONDO:0015117","xrefs":{"Monarch":{"xref_id":"0015117"}}}


id: PBO:0002547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc3/Med27","termid":"PBO:0002547"}


id: GO:1905358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["GOC:TermGenie","PMID:27268497","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"},{"relation_name":"positively_regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"positive regulation of snRNA pseudouridine synthesis","synonyms":[{"name":"activation of snRNA pseudouridine synthesis","type":"narrow"},{"name":"up regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"up-regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"upregulation of snRNA pseudouridine synthesis","type":"exact"}],"termid":"GO:1905358"}


id: SO:0000919
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to substitute an I for an A.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000919 substitute_A_to_I (obsolete SO:0000919)","synonyms":[{"name":"substitute A to I","type":"exact"}],"termid":"SO:0000919"}


id: PBO:0040994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3","termid":"PBO:0040994"}


id: PBO:0005634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component I (predicted)","termid":"PBO:0005634"}


id: GO:0098565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the endosome membrane that faces the lumen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"lumenal side of endosome membrane","synonyms":[{"name":"internal leaflet of endosome membrane","type":"exact"},{"name":"internal side of endosome membrane","type":"exact"}],"termid":"GO:0098565"}


id: MONDO:0024637
data:
  {"annotated_genes":["SJAG_00490","SJAG_04755","SJAG_01111","SJAG_03689","SJAG_05313","SJAG_04213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[84940,84941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[87079,87080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[86693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A malignant neoplasm arising exclusively from the soft tissues.","definition_xrefs":["NCIT:C4867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00490":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1632429","SCTID:269469005","UMLS:C4551686"],"synonyms":[{"name":"malignant neoplasm of soft tissue","type":"exact"},{"name":"malignant neoplasm of the soft tissue","type":"exact"},{"name":"malignant soft tissue neoplasm","type":"exact"},{"name":"malignant soft tissue tumor","type":"exact"},{"name":"malignant soft tissue tumour","type":"exact"},{"name":"malignant tumor of soft tissue","type":"exact"},{"name":"malignant tumor of the soft tissue","type":"exact"},{"name":"malignant tumour of soft tissue","type":"exact"},{"name":"malignant tumour of the soft tissue","type":"exact"}],"termid":"MONDO:0024637","terms_by_termid":{"MONDO:0011655":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0024637"}}}


id: PR:O74972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4B4.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein fyv4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.11","synonyms":[{"name":"Spom972h-SPBC4B4.11","type":"exact"}],"termid":"PR:O74972"}


id: PBO:0084601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR312C-B was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, SPH1/YLR313C","termid":"PBO:0084601"}


id: MONDO:0018652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete biological anomaly without phenotypic characterization (obsolete MONDO:0018652)","secondary_identifiers":["Orphanet:447874"],"termid":"MONDO:0018652","xrefs":{"Monarch":{"xref_id":"0018652"}}}


id: PR:Q10324
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G8.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.12","synonyms":[{"name":"Spom972h-sec3","type":"exact"}],"termid":"PR:Q10324"}


id: PBO:0081790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 718","termid":"PBO:0081790"}


id: GO:1902152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to DNA integrity checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to cell cycle checkpoint signaling","termid":"GO:1902146"},{"relation_name":"is_a","term_name":"regulation of response to DNA integrity checkpoint signaling","termid":"GO:1902151"},{"relation_name":"positively_regulates","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to DNA integrity checkpoint signaling","synonyms":[{"name":"activation of DNA integrity checkpoint effector process","type":"exact"},{"name":"activation of response to DNA integrity checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"positive regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"up regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"up regulation of response to DNA integrity checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"up-regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"up-regulation of response to DNA integrity checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"upregulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"upregulation of response to DNA integrity checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:1902152"}


id: PBO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 3","termid":"PBO:0047687"}


id: GO:0106361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-beta-L-rhamnose + L-arginyl-[protein] = dTDP + H+ + N(omega)-(L-rhamnosyl)-L-arginyl-[protein].","definition_xrefs":["PMID:25686373","GOC:sp","PMID:26060278","RHEA:66692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-arginine rhamnosyltransferase activity","termid":"GO:0106361"}


id: PBO:0065979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleic acid export 1","termid":"PBO:0065979"}


id: PR:Q9URX6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02089","PANTHER:PTHR10956:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.08","secondary_identifiers":["UniProtKB:Q9URX6"],"synonyms":[{"name":"Spom972h-RPL31","type":"exact"}],"termid":"PR:Q9URX6"}


id: PBO:0028778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028778"}


id: PATO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits variation or change.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant","synonyms":[{"name":"variable","type":"exact"}],"termid":"PATO:0001227"}


id: PBO:0050511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C11","termid":"PBO:0050511"}


id: GO:0019122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of peptidyl-D-alanine, by either racemization or from peptidyl-L-serine.","definition_xrefs":["RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-D-alanine racemization","synonyms":[{"name":"alanine racemization","type":"broad"}],"termid":"GO:0019122"}


id: GO:0052362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont protein (obsolete GO:0052362)","termid":"GO:0052362"}


id: MOD:00710
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a proton and replaces two hydrogen atoms with two methyl groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"protonated-dimethylated residue","synonyms":[{"name":"Me2+Res","type":"exact"}],"termid":"MOD:00710"}


id: PBO:0062882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian adenocarcinoma amplified long non-coding RNA","termid":"PBO:0062882"}


id: PBO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.1","termid":"PBO:0002644"}


id: MONDO:0007412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of syndromic craniosynostosis, characterized by a variable degree of craniosynostosis, with cloverleaf skull reported in over 50% of cases, cutis gyrata, corduroy-like linear striations in the skin, acanthosis nigricans, skin tags, and choanal stenosis or atresia. Additional features include facial features similar to Crouzon disease, ear defects (conductive hearing loss, posteriorly angulated ears, stenotic auditory canals, preauricular furrows, and narrow ear canals), hirsutism, a prominent umbilical stump, and genitorurinary anomalies (anteriorly placed anus, hypoplasic labia, hypospadias). BSS is associated with a poor outcome as patients present an elevated risk for sudden death in their first year of life. Significant developmental delay and intellectual disability are observed in most patients who survive infancy.","definition_xrefs":["Orphanet:1555"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"Beare-Stevenson cutis gyrata syndrome","secondary_identifiers":["icd11.foundation:947865461","NCIT:C123813","OMIM:123790","MEDGEN:377668","SCTID:703528008","MESH:C565129","UMLS:C1852406","ICD9:759.89","DOID:0050660","GARD:332"],"synonyms":[{"name":"BSTVS","type":"related"},{"name":"Beare Stevenson syndrome","type":"related"},{"name":"Beare-Stevenson cutis gyrata syndrome","type":"exact"},{"name":"Beare-Stevenson syndrome","type":"related"},{"name":"cutis gyrata - acanthosis nigricans - craniosynostosis","type":"related"},{"name":"cutis gyrata syndrome of Beare and Stevenson","type":"related"},{"name":"cutis gyrata-acanthosis nigricans-craniosynostosis syndrome","type":"related"}],"termid":"MONDO:0007412","xrefs":{"Monarch":{"xref_id":"0007412"}}}


id: GO:1904859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell chemotaxis to vascular endothelial growth factor.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph","PMID:21885851","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:1904857"},{"relation_name":"positively_regulates","term_name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis to vascular endothelial growth factor","synonyms":[{"name":"activation of endothelial cell chemotaxis to vascular endothelial growth factor","type":"narrow"},{"name":"up regulation of endothelial cell chemotaxis to vascular endothelial growth factor","type":"exact"},{"name":"up-regulation of endothelial cell chemotaxis to vascular endothelial growth factor","type":"exact"},{"name":"upregulation of endothelial cell chemotaxis to vascular endothelial growth factor","type":"exact"}],"termid":"GO:1904859"}


id: FYPO:0001643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of tryptophan measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular tryptophan level","synonyms":[{"name":"normal cellular tryptophan level during mitotic cell cycle","type":"related"},{"name":"normal cellular tryptophan level during vegetative growth","type":"exact"},{"name":"normal level of tryptophan in cell","type":"exact"}],"termid":"FYPO:0001643"}


id: PBO:0091904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf6 (frameshifted)","termid":"PBO:0091904"}


id: PBO:0043536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 4","termid":"PBO:0043536"}


id: MONDO:0009450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia with excessively long cilia","secondary_identifiers":["UMLS:C0340036","GARD:2982","MEDGEN:90947","MESH:C536287","ICD9:759.89","SCTID:233665006","OMIM:242680"],"synonyms":[{"name":"ciliary dyskinesia with excessively long cilia","type":"exact"},{"name":"immotile cilia syndrome due to excessively long cilia","type":"related"}],"termid":"MONDO:0009450","xrefs":{"Monarch":{"xref_id":"0009450"}}}


id: GO:0033009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, vestigial nucleus found in some plastids that derive from a eukaryotic endosymbiont. Observed in chlorarachniophytes and cryptomonads, which acquired their plastids from a green and red alga respectively.","definition_xrefs":["PMID:16760254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"nucleomorph","secondary_identifiers":["Wikipedia:Nucleomorph"],"termid":"GO:0033009"}


id: GO:0045453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products.","definition_xrefs":["PMID:10968780","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"},{"relation_name":"part_of","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone resorption","secondary_identifiers":["Wikipedia:Bone_resorption"],"termid":"GO:0045453"}


id: PBO:0083721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident protein involved in peroxisomal biogenesis; ER-localized protein that associates with peroxisomes; interacts with Pex30p and reticulons Rtn1p and Yop1p to regulate peroxisome biogenesis from the ER; role in peroxisomal-destined vesicular flow from the ER; regulates peroxisomal size, number and distribution; Pex28p and Pex29p may act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p; forms ER foci upon DNA replication stress","termid":"PBO:0083721"}


id: PBO:0113152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone; regulates chromatin structure, transcription, mRNA 3'-end formation and genome stability; role in chromatin remodeling and nucleosome assembly; required for initiation of DNA replication, promoting origin licensing through MCM helicase loading; required for fidelity of promoter selection through maintenance of chromatin structure during transcription; required for H3K36 trimethylation but not dimethylation by Set2p","termid":"PBO:0113152"}


id: GO:0061375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillotectal tract over time, from its formation to the mature structure. The mammillotectal tract is the collection of axons that connects the ventral diencephalon to the superior colliculus.","definition_xrefs":["GOC:dph","GOC:yaf","PMID:10662642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary axonal complex development","termid":"GO:0061373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillotectal axonal tract development","termid":"GO:0061375"}


id: PBO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHD4 antisense RNA 1","termid":"PBO:0045979"}


id: PBO:0043069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRM3 antisense RNA 2","termid":"PBO:0043069"}


id: FYPO:0001545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing L-canavanine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on L-canavanine","synonyms":[{"name":"normal cell population growth in presence of L-canavanine","type":"exact"},{"name":"normal cell population growth on L-canavanine","type":"exact"},{"name":"normal cell population growth on canavanine","type":"broad"},{"name":"normal cellular response to L-canavanine","type":"related"},{"name":"normal vegetative cell population growth on L-canavanine","type":"exact"}],"termid":"FYPO:0001545"}


id: MONDO:0004613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ischemia of the intestine that is rapid in onset.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ischemic bowel disorder","termid":"MONDO:0020675"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"acute intestinal ischemia","secondary_identifiers":["NCIT:C34356","MEDGEN:116","UMLS:C0001363","ICD9:557.0","DOID:8590","SCTID:91489000"],"synonyms":[{"name":"acute intestinal ischemia","type":"exact"},{"name":"acute intestinal vascular insufficiency","type":"narrow"}],"termid":"MONDO:0004613","xrefs":{"Monarch":{"xref_id":"0004613"}}}


id: PBO:0038381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_allergic_trigger","termid":"PBO:0038381"}


id: PBO:0045416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 5 pseudogene 1","termid":"PBO:0045416"}


id: PBO:0089424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane Haemolysin-III family protein involved in zinc homeostasis Izh3","termid":"PBO:0089424"}


id: FYECO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The expression level of the gene was increased compared to expressing it from its endogenous promoter in the genome.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000007 overexpression (obsolete FYECO:0000007)","termid":"FYECO:0000007"}


id: GO:0038128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB2 on the surface of a cell. The pathway ends with regulation of a downstream cellular process, e.g. transcription. ERBB2 receptors are themselves unable to bind to ligands, but act as a signal-amplifying tyrosine kinase within a heterodimeric pair.","definition_xrefs":["PMID:16460914","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB2 signaling pathway","secondary_identifiers":["Reactome:R-HSA-1227986"],"synonyms":[{"name":"ERBB2 signalling pathway","type":"exact"},{"name":"HER2 signaling pathway","type":"exact"},{"name":"NEU signaling","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-2 signaling pathway","type":"exact"}],"termid":"GO:0038128"}


id: SO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Lysidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysidine","secondary_identifiers":["RNAMOD:028","http://en.wikipedia.org/wiki/Lysidine"],"synonyms":[{"name":"k2C","type":"exact"}],"termid":"SO:0001289"}


id: GO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole metabolic process","synonyms":[{"name":"indole metabolism","type":"exact"}],"termid":"GO:0042431"}


id: GO:0046405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol = 3-hydroxypropanal + H2O.","definition_xrefs":["PMID:18307109","EC:4.2.1.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerol dehydratase activity","secondary_identifiers":["MetaCyc:GLYCEROL-DEHYDRATASE-RXN","RHEA:19765"],"synonyms":[{"name":"glycerol dehydrase activity","type":"related"},{"name":"glycerol hydro-lyase (3-hydroxypropanal-forming)","type":"related"},{"name":"glycerol hydro-lyase activity","type":"related"}],"termid":"GO:0046405"}


id: FYPO:0003049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript, i.e. an RNA molecule synthesized on a DNA template by RNA polymerase, is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["PMID:22582262","SO:0000673","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcript length","termid":"FYPO:0003048"},{"relation_name":"output_of","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0003048"],"is_obsolete":false,"name":"increased transcriptional readthrough","synonyms":[{"name":"3'-extended transcript","type":"related"},{"name":"increased transcript length by 3' extension","type":"related"},{"name":"increased transcript length due to transcriptional readthrough","type":"exact"},{"name":"poly(A) readthrough","type":"related"}],"termid":"FYPO:0003049"}


id: PR:P21547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- var1 gene.","definition_xrefs":["UniProtKB:P21547","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein var1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.08","synonyms":[{"name":"Spom972h-var1","type":"exact"}],"termid":"PR:P21547"}


id: FYPO:0003667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which crossover junction endodeoxyribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal crossover junction endodeoxyribonuclease activity","termid":"FYPO:0003666"},{"relation_name":"is_a","term_name":"abolished endodeoxyribonuclease activity","termid":"FYPO:0007141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished crossover junction endodeoxyribonuclease activity","synonyms":[{"name":"crossover junction endodeoxyribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0003667"}


id: PBO:0026797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteasome_regulatory_particle_binding","termid":"PBO:0026797"}


id: PBO:0072309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 6","termid":"PBO:0072309"}


id: MONDO:1012155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, domestic cat","secondary_identifiers":["OMIA:000631-9685"],"termid":"MONDO:1012155","xrefs":{"Monarch":{"xref_id":"1012155"}}}


id: GO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type IX trimer","termid":"GO:0005594"}


id: PBO:0056394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 1","termid":"PBO:0056394"}


id: MONDO:0010059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinal muscular atrophy, type I, with congenital bone fractures (obsolete MONDO:0010059)","termid":"MONDO:0010059","xrefs":{"Monarch":{"xref_id":"0010059"}}}


id: PR:O14286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family B member 7, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24221:SF68","OMA:SCHPO01534","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur clusters transporter atm1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.01","secondary_identifiers":["UniProtKB:O14286"],"synonyms":[{"name":"Spom972h-ABCB7","type":"exact"}],"termid":"PR:O14286"}


id: MONDO:0001467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete specific bursitis often of occupational origin (obsolete MONDO:0001467)","secondary_identifiers":["ICD9:727.2","DOID:12223","SCTID:42812006"],"synonyms":[{"name":"specific bursitides often of occupational origin","type":"exact"}],"termid":"MONDO:0001467","xrefs":{"Monarch":{"xref_id":"0001467"}}}


id: MONDO:0011046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by short stature presenting in the neonatal period associated with osteochondrodysplastic lesions and facial dysmorphism.","definition_xrefs":["Orphanet:2867"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, Brussels type","secondary_identifiers":["UMLS:C1832439","MEDGEN:318625","MESH:C537121","GARD:4838","OMIM:601350","SCTID:719213009","icd11.foundation:251068104"],"synonyms":[{"name":"Mievis Verellen-Dumoulin syndrome","type":"related"},{"name":"Mievis-Verellen-Dumoulin syndrome","type":"exact"},{"name":"familial short stature with facial dysmorphism and osteochondrodysplastic lesions","type":"related"},{"name":"short stature syndrome, Brussels type","type":"related"}],"termid":"MONDO:0011046","xrefs":{"Monarch":{"xref_id":"0011046"}}}


id: GO:0003378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of the inflammatory response.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of inflammatory response by sphingosine-1-phosphate signaling pathway (obsolete GO:0003378)","synonyms":[{"name":"regulation of inflammatory response by sphingolipid signaling pathway","type":"broad"},{"name":"regulation of inflammatory response by sphingolipid signalling pathway","type":"broad"}],"termid":"GO:0003378"}


id: MOD:01690
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-[(12R)-12-hydroxymyristoyl]-L-cysteine.","definition_xrefs":["RESID:AA0516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-[(12R)-12-hydroxymyristoyl]-L-cysteine","synonyms":[{"name":"2-[(12R)-12-hydroxytetradecanoyl]amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"LIPID N-[(12R)-12-hydroxymyristoyl]cysteine","type":"exact"},{"name":"N-[(12R)-12-hydroxymyristoyl]-L-cysteine","type":"exact"},{"name":"N-[(12R)-12-hydroxytetradecanoyl]cysteine","type":"exact"}],"termid":"MOD:01690"}


id: GO:0000814
data:
  {"annotated_genes":["SJAG_04936","SJAG_04912","SJAG_04024"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70610,71781,78186],"is_not":false,"summary":null,"term":"GO:0000814"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex required for transport and functions downstream of ESCRT I complex. It consists of the class E vacuolar protein sorting (Vps) proteins and is required for the membrane recruitment of ESCRT III complex and binds to ubiquitinated cargoes.","definition_xrefs":["GOC:rb","PMID:12892785","PMID:12900393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04024":null,"SJAG_04912":null,"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0031410","GO:0032991","GO:0005768","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ESCRT II complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000814","terms_by_termid":{"GO:0000814":null}}


id: GO:0019435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"sophorosyloxydocosanoate metabolic process","termid":"GO:0019434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sophorosyloxydocosanoate biosynthetic process","secondary_identifiers":["MetaCyc:SOPHOROSYLOXYDOCOSANOATE-SYN-PWY"],"synonyms":[{"name":"sophorosyloxydocosanoate anabolism","type":"exact"},{"name":"sophorosyloxydocosanoate biosynthesis","type":"exact"},{"name":"sophorosyloxydocosanoate formation","type":"exact"},{"name":"sophorosyloxydocosanoate synthesis","type":"exact"}],"termid":"GO:0019435"}


id: PBO:0083424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF STP3/YLR375W","termid":"PBO:0083424"}


id: PBO:0079134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE domain containing 1","termid":"PBO:0079134"}


id: FYPO:0005742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is decreased under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal invertase activity","termid":"FYPO:0005741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased invertase activity during glucose starvation","synonyms":[{"name":"decreased beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"decreased invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"decreased invertase activity during glucose depletion","type":"exact"},{"name":"decreased invertase activity during glucose deprivation","type":"exact"},{"name":"decreased invertase activity during glucose limitation","type":"related"},{"name":"reduced invertase activity during glucose starvation","type":"exact"}],"termid":"FYPO:0005742"}


id: PBO:0004686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Git1","termid":"PBO:0004686"}


id: GO:0098688
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An excitatory synapse formed by the parallel fibers of granule cells synapsing onto the dendrites of Purkinje cells.","definition_xrefs":["PMID:3209740","PMID:16623829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory synapse","termid":"GO:0060076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"parallel fiber to Purkinje cell synapse","termid":"GO:0098688"}


id: MONDO:0022174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cytogenetic abnormality that refers to the allelic loss of all or part of the short arm of chromosome 12.","definition_xrefs":["NCIT:C36410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 12","termid":"MONDO:0017277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12p deletion","secondary_identifiers":["MESH:C538302","Orphanet:316244","UMLS:C0795844","GARD:21404","MEDGEN:208640","MESH:C538301"],"synonyms":[{"name":"12p del","type":"related"},{"name":"12p deletion","type":"related"},{"name":"12p monosomy","type":"related"},{"name":"12p-","type":"related"},{"name":"del(12p)","type":"related"},{"name":"deletion 12p","type":"related"},{"name":"loss of chromosome 12p","type":"related"},{"name":"monosomy 12p","type":"related"},{"name":"partial deletion of chromosome 12p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 12","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 12","type":"exact"},{"name":"partial monosomy 12p","type":"related"},{"name":"partial monosomy of chromosome 12p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 12","type":"exact"}],"termid":"MONDO:0022174","xrefs":{"Monarch":{"xref_id":"0022174"}}}


id: PR:G2TRL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.09 gene.","definition_xrefs":["UniProtKB:G2TRL0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C922.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.09","synonyms":[{"name":"Spom972h-SPAC922.09","type":"exact"}],"termid":"PR:G2TRL0"}


id: MONDO:0957595
data:
  {"annotated_genes":["SJAG_00328"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85974],"is_not":false,"summary":null,"term":"MONDO:0957595"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Ziegler-Huang syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1844409","OMIM:620501","UMLS:C5882688"],"termid":"MONDO:0957595","terms_by_termid":{"MONDO:0957595":null},"xrefs":{"Monarch":{"xref_id":"0957595"}}}


id: PBO:0067924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 226","termid":"PBO:0067924"}


id: MONDO:0044251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete australia antigen (obsolete MONDO:0044251)","secondary_identifiers":["OMIM:209800"],"synonyms":[{"name":"Australia antigen","type":"related"}],"termid":"MONDO:0044251","xrefs":{"Monarch":{"xref_id":"0044251"}}}


id: PBO:0043524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 6","termid":"PBO:0043524"}


id: GO:0050832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"},{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to fungus","secondary_identifiers":["GO:0009623","GO:0042831","GO:0009817"],"synonyms":[{"name":"defence response to fungi","type":"exact"},{"name":"defence response to fungus","type":"exact"},{"name":"defense response to fungi","type":"exact"},{"name":"defense response to fungus, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogenic fungi","type":"narrow"},{"name":"resistance response to pathogenic fungus","type":"narrow"},{"name":"response to parasitic fungi","type":"narrow"},{"name":"response to parasitic fungus","type":"narrow"}],"termid":"GO:0050832"}


id: PBO:0110049
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial MICOS interactor required for Cristae morphology","termid":"PBO:0110049"}


id: PBO:0116194
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EG5","termid":"PBO:0116194"}


id: PBO:0054353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1746","termid":"PBO:0054353"}


id: PBO:0069393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 653, pseudogene","termid":"PBO:0069393"}


id: PBO:0069992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1287, pseudogene","termid":"PBO:0069992"}


id: PATO:0001352
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which is equal to the mass exerting an influence on a one-dimensional object.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Linear_density"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear density","termid":"PATO:0001352"}


id: MONDO:0013739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chilblain lupus in which the cause of the disease is a mutation in the SAMHD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial chilblain lupus","termid":"MONDO:0018827"},{"relation_name":"is_a","term_name":"SAMHD1-related type 1 interferonopathy","termid":"MONDO:0700260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"chilblain lupus 2","secondary_identifiers":["GARD:18494","MEDGEN:482351","UMLS:C3280721","OMIM:614415"],"synonyms":[{"name":"CHBL2","type":"related"},{"name":"Chilblain lupus type 2","type":"exact"},{"name":"SAMHD1 chilblain lupus","type":"exact"},{"name":"chilblain lupus 2","type":"exact"},{"name":"chilblain lupus caused by mutation in SAMHD1","type":"exact"}],"termid":"MONDO:0013739","xrefs":{"Monarch":{"xref_id":"0013739"}}}


id: PBO:0074996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-7","termid":"PBO:0074996"}


id: MONDO:0006302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma characterized by the presence of complex micropapillary structures covered by round and cuboidal cells with a high nuclear to cytoplasmic ratio.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"micropapillary serous carcinoma","secondary_identifiers":["MEDGEN:825423","NCIT:C6882","UMLS:C3839578","EFO:1000377"],"termid":"MONDO:0006302","xrefs":{"Monarch":{"xref_id":"0006302"}}}


id: GO:0047316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate + L-glutamine = 2-oxoglutaramate + L-phenylalanine.","definition_xrefs":["EC:2.6.1.64","RHEA:17593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamine-phenylpyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R01375","MetaCyc:2.6.1.64-RXN"],"synonyms":[{"name":"L-glutamine:phenylpyruvate aminotransferase activity","type":"related"},{"name":"glutamine transaminase K activity","type":"related"},{"name":"glutamine--phenylpyruvate aminotransferase activity","type":"related"},{"name":"glutamine-phenylpyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047316"}


id: GO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way. Once recruited to an RNA polymerase III type 3 promoter by SNAP-type and TFIIIC-type factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["PMID:12381659","GOC:txnOH-2018"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity (obsolete GO:0001029)","synonyms":[{"name":"RNA polymerase III type 3 promoter polymerase recruiting transcription factor activity","type":"related"}],"termid":"GO:0001029"}


id: FYPO:0005544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abnormal.","definition_xrefs":["PomBase:mah","PMID:27082518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell division site plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to plasma membrane division site during vegetative growth","type":"exact"}],"termid":"FYPO:0005544"}


id: PBO:0066431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG intronic transcript 1","termid":"PBO:0066431"}


id: PBO:0052136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 3","termid":"PBO:0052136"}


id: PBO:0003750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17","termid":"PBO:0003750"}


id: MONDO:0007914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar stenosis, familial","secondary_identifiers":["MESH:C563613","MEDGEN:372016","OMIM:152550","UMLS:C1835320"],"synonyms":[{"name":"lumbar stenosis, familial","type":"exact"}],"termid":"MONDO:0007914","xrefs":{"Monarch":{"xref_id":"0007914"}}}


id: MONDO:0010612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by infantile hypotonia followed by onset of ataxia, cataract and intellectual deficit by preschool age. Cerebral atrophy was also reported.","definition_xrefs":["Orphanet:1397"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephaly-cerebellar agenesis syndrome","secondary_identifiers":["MESH:C564407","UMLS:C1844005","GARD:1200","OMIM:307010","MEDGEN:375335"],"synonyms":[{"name":"X-linked hydrocephalus-cerebellar agenesis-intellectual disability syndrome","type":"exact"},{"name":"cerebellum agenesis hydrocephaly","type":"related"},{"name":"hydrocephalus with cerebellar agenesis","type":"related"}],"termid":"MONDO:0010612","xrefs":{"Monarch":{"xref_id":"0010612"}}}


id: FYPO:0006830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to replete levels of zinc ion is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:29529046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to replete zinc","synonyms":[{"name":"normal RNA accumulation during cellular response to replete zinc","type":"related"},{"name":"normal RNA level during cellular response to replete zinc during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to replete zinc during vegetative growth","type":"exact"},{"name":"normal RNA level during replete zinc","type":"exact"},{"name":"normal RNA level in response to replete zinc","type":"exact"},{"name":"normal mRNA level during cellular response to replete zinc","type":"narrow"},{"name":"normal transcript level during cellular response to replete zinc","type":"exact"}],"termid":"FYPO:0006830"}


id: PBO:0056267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 3","termid":"PBO:0056267"}


id: PBO:0011514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamideformyltransferase","termid":"PBO:0011514"}


id: PBO:0062931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase 3","termid":"PBO:0062931"}


id: GO:0016621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamaldehyde + CoA + NADP+ = cinnamoyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.2.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cinnamoyl-CoA reductase activity","secondary_identifiers":["MetaCyc:CINNAMOYL-COA-REDUCTASE-RXN","RHEA:10620"],"synonyms":[{"name":"cinnamaldehyde:NADP+ oxidoreductase (CoA-cinnamoylating)","type":"related"},{"name":"cinnamoyl CoA reductase activity","type":"exact"},{"name":"cinnamoyl-CoA:NADPH reductase activity","type":"related"},{"name":"cinnamoyl-coenzyme A reductase activity","type":"related"},{"name":"feruloyl coenzyme A reductase activity","type":"related"},{"name":"feruloyl-CoA reductase activity","type":"related"},{"name":"ferulyl-CoA reductase activity","type":"related"},{"name":"p-hydroxycinnamoyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0016621"}


id: GO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic (obsolete GO:0000291)","synonyms":[{"name":"exonucleolytic degradation of mRNA","type":"exact"},{"name":"mRNA breakdown, exonucleolytic","type":"exact"},{"name":"mRNA degradation, exonucleolytic","type":"exact"},{"name":"nuclear mRNA catabolic process, exonucleolytic","type":"exact"}],"termid":"GO:0000291"}


id: GO:0072342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of anion stress, an increase or decrease in the concentration of negatively charged ions in the environment.","definition_xrefs":["PMID:19641131","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anion stress","termid":"GO:0072342"}


id: MONDO:0018517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete obsolete carcinoma of the anal canal (obsolete MONDO:0018517)","termid":"MONDO:0018517","xrefs":{"Monarch":{"xref_id":"0018517"}}}


id: PR:O42706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.08","synonyms":[{"name":"Spom972h-rpl2102","type":"exact"}],"termid":"PR:O42706"}


id: _global:regulates_o_transports_or_maintains_localization_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_transports_or_maintains_localization_of","secondary_identifiers":["GOREL:0000038"],"termid":"_global:regulates_o_transports_or_maintains_localization_of"}


id: GO:0042445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormone metabolic process","secondary_identifiers":["GO:0034754"],"synonyms":[{"name":"cellular hormone metabolic process","type":"related"},{"name":"hormone metabolism","type":"exact"}],"termid":"GO:0042445"}


id: PBO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase (predicted)","termid":"PBO:0001224"}


id: GO:0090719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune effector response involving T cells and B lineage cells. In the case of B lineage cells, the effector cells are the antibody secreting plasma cells whereas for T cells the effector cells may be helper T cells or cytotoxic T cells.","definition_xrefs":["ISBN:1405196831","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune effector response involving T cells and B lineage cells","termid":"GO:0090719"}


id: GO:0039642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a virion in which the nucleic acid is confined.","definition_xrefs":["GOC:bm","PMID:14291596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion nucleoid","termid":"GO:0039642"}


id: PBO:0057049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 136","termid":"PBO:0057049"}


id: PBO:0055570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3006","termid":"PBO:0055570"}


id: PBO:0085255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for autophagic vesicle formation; also required for vesicle formation during pexophagy and the cytoplasm-to-vaucole targeting (Cvt) pathway; involved in Atg9p cycling between the phagophore assembly site and mitochondria; contains an APT1 domain that binds phosphatidylinositol-3-phosphate; essential for cell cycle progression from G2/M to G1 under nitrogen starvation; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0085255"}


id: GO:0102853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-18:1-sn-glycerol-3-phosphocholine + O2 + a reduced electron acceptor = 1-18:2-2-18:1-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-18:1-sn-glycerol-3-phosphocholine desaturase activity (obsolete GO:0102853)","termid":"GO:0102853"}


id: MOD:01060
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidomethyl-L-cysteine.","definition_xrefs":["PubMed:12422359","Unimod:4#C","DeltaMass:337","OMSSA:3","DeltaMass:196","PubMed:18306178","PubMed:10504701","PubMed:11510821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxamidomethyl-L-cysteine","synonyms":[{"name":"CamC","type":"exact"},{"name":"CamCys","type":"exact"},{"name":"Carbamidomethyl","type":"related"},{"name":"Carboxamidomethyl (on Cysteine)","type":"exact"},{"name":"Carboxyamidomethyl Cystenyl","type":"exact"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"S-carbamoylmethyl-L-cysteine","type":"exact"},{"name":"amidocarboxymethylcysteine","type":"exact"},{"name":"carbamidomethylc","type":"exact"},{"name":"carbamoylmethylcysteine","type":"exact"}],"termid":"MOD:01060"}


id: PBO:0017708
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae BET2","termid":"PBO:0017708"}


id: MONDO:0957319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudohypoaldosteronism, type I (obsolete MONDO:0957319)","termid":"MONDO:0957319","xrefs":{"Monarch":{"xref_id":"0957319"}}}


id: PBO:0045174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJA2 divergent transcript","termid":"PBO:0045174"}


id: PBO:0048784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 14","termid":"PBO:0048784"}


id: PBO:0031214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_outer_repeat_transcript_level","termid":"PBO:0031214"}


id: SO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for U3_snoRNA. U3 snoRNA is a member of the box C/D class of small nucleolar RNAs. The U3 snoRNA secondary structure is characterised by a small 5' domain (with boxes A and A'), and a larger 3' domain (with boxes B, C, C', and D), the two domains being linked by a single-stranded hinge. Boxes B and C form the B/C motif, which appears to be exclusive to U3 snoRNAs, and boxes C' and D form the C'/D motif. The latter is functionally similar to the C/D motifs found in other snoRNAs. The 5' domain and the hinge region act as a pre-rRNA-binding domain. The 3' domain has conserved protein-binding sites. Both the box B/C and box C'/D motifs are sufficient for nuclear retention of U3 snoRNA. The box C'/D motif is also necessary for nucleolar localization, stability and hypermethylation of U3 snoRNA. Both box B/C and C'/D motifs are involved in specific protein interactions and are necessary for the rRNA processing functions of U3 snoRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"C_D_box_snoRNA_gene","termid":"SO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_snoRNA_gene","synonyms":[{"name":"small nucleolar RNA U3 gene, snoRNA U3 gene, U3 small nucleolar RNA gene, U3 snoRNA gene","type":"exact"}],"termid":"SO:0002378"}


id: GO:0005762
data:
  {"annotated_genes":["SJAG_00497","SJAG_05270","SJAG_05218","SJAG_01463","SJAG_03284","SJAG_02071","SJAG_03176","SJAG_01045","SJAG_03402","SJAG_03459","SJAG_03636","SJAG_01829","SJAG_04889","SJAG_03040","SJAG_01630","SJAG_04244","SJAG_01473","SJAG_01591","SJAG_00086","SJAG_06253","SJAG_05244","SJAG_00844","SJAG_06110","SJAG_03297","SJAG_02762","SJAG_03649","SJAG_05221","SJAG_01727","SJAG_04019","SJAG_04493","SJAG_04893","SJAG_01719","SJAG_01413","SJAG_04490","SJAG_04216","SJAG_05573","SJAG_03192","SJAG_04689","SJAG_02836","SJAG_01303","SJAG_07009","SJAG_00315","SJAG_01478","SJAG_00799","SJAG_04207"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66667,69223,70458,70855,71485,71770,72114,72570,72724,74413,75155,75427,76336,76363,77002,77590,77777,77874,78165,78937,79051,79406,79615,80172,96363,97738,97759,98434,103472,105506,106553,107877,107976,108027,109641,110570,110895,112020,112520,113250,114398,114516,115962,116071,117731],"is_not":false,"summary":null,"term":"GO:0005762"}]},"cv_name":"cellular_component","definition":"The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar large ribosomal subunit","termid":"GO:0000315"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial ribosome","termid":"GO:0005761"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00086":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01829":null,"SJAG_02071":null,"SJAG_02762":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04689":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_05218":null,"SJAG_05221":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial large ribosomal subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"39S ribosomal subunit, mitochondrial","type":"narrow"}],"termid":"GO:0005762","terms_by_termid":{"GO:0005762":null}}


id: MONDO:0017515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of fingers","termid":"MONDO:0017451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of fingers, unilateral","secondary_identifiers":["Orphanet:295128","icd11.foundation:825108601"],"synonyms":[{"name":"short fingers, unilateral","type":"exact"}],"termid":"MONDO:0017515","xrefs":{"Monarch":{"xref_id":"0017515"}}}


id: GO:0039723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of a host serine/threonine kinase TBK1.","definition_xrefs":["PMID:34084167","PMID:22171259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","secondary_identifiers":["VZ:4477"],"synonyms":[{"name":"inhibition of host TBK1 by virus","type":"related"},{"name":"suppression by virus of host TBK1 activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","type":"narrow"},{"name":"symbiont-mediated suppression of host TKB signaling","type":"related"}],"termid":"GO:0039723"}


id: PBO:0073770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 3","termid":"PBO:0073770"}


id: PBO:0086258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates meiotic SPB cohesion and telomere clustering; localizes to both spindle pole bodies (SPBs) and telomeres; required for bouquet formation, effective homolog pairing, ordered cross-over distribution, sister chromatid cohesion at meiotic telomeres, chromosomal segregation and telomere-led rapid prophase movement","termid":"PBO:0086258"}


id: GO:0010264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytic acid, myo-inositol hexakisphosphate, a regulator of intracellular signaling, a highly abundant animal anti-nutrient and a phosphate and mineral storage compound in plant seeds.","definition_xrefs":["PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"},{"relation_name":"is_a","term_name":"myo-inositol hexakisphosphate metabolic process","termid":"GO:0033517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate biosynthetic process","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis","type":"exact"},{"name":"myo-inositol hexakisphosphate formation","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis","type":"exact"},{"name":"phytate biosynthesis","type":"exact"},{"name":"phytate biosynthetic process","type":"exact"}],"termid":"GO:0010264"}


id: GO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of oomycetes origin.","definition_xrefs":["GOC:rl","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"},{"relation_name":"part_of","term_name":"response to oomycetes","termid":"GO:0002239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to molecule of oomycetes origin","synonyms":[{"name":"response to oomycetes associated molecule","type":"exact"}],"termid":"GO:0002240"}


id: GO:0033490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, via the intermediate lathosterol.","definition_xrefs":["GOC:mah","MetaCyc:PWY66-341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"cholesterol biosynthetic process via lathosterol","secondary_identifiers":["Reactome:R-HSA-6807062"],"synonyms":[{"name":"cholesterol anabolism via lathosterol","type":"exact"},{"name":"cholesterol biosynthesis via lathosterol","type":"exact"},{"name":"cholesterol formation via lathosterol","type":"exact"},{"name":"cholesterol synthesis via lathosterol","type":"exact"}],"termid":"GO:0033490"}


id: GO:1905592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of optical nerve axon regeneration.","definition_xrefs":["GO_REF:0000058","PMID:16699509","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon regeneration","termid":"GO:0048681"},{"relation_name":"is_a","term_name":"regulation of optical nerve axon regeneration","termid":"GO:1905591"},{"relation_name":"negatively_regulates","term_name":"optical nerve axon regeneration","termid":"GO:0101027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of optical nerve axon regeneration","synonyms":[{"name":"down regulation of optical nerve axon regeneration","type":"exact"},{"name":"down-regulation of optical nerve axon regeneration","type":"exact"},{"name":"downregulation of optical nerve axon regeneration","type":"exact"},{"name":"inhibition of optical nerve axon regeneration","type":"narrow"}],"termid":"GO:1905592"}


id: PBO:0114137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulphite transmembrane transporter Ssu4","termid":"PBO:0114137"}


id: FYPO:0003778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum tubular network is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to endoplasmic reticulum tubular network","synonyms":[{"name":"decreased protein localisation to endoplasmic reticulum tubular network","type":"exact"},{"name":"decreased protein localization to ER tubular network","type":"exact"},{"name":"decreased protein localization to endoplasmic reticulum tubular network during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to endoplasmic reticulum tubular network during vegetative growth","type":"exact"},{"name":"decreased protein localization to tubular ER","type":"exact"},{"name":"reduced protein localization to endoplasmic reticulum tubular network","type":"exact"}],"termid":"FYPO:0003778"}


id: MONDO:0019692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple epiphyseal dysplasia and pseudoachondroplasia (obsolete MONDO:0019692)","secondary_identifiers":["Orphanet:93429","icd11.foundation:2078345611"],"termid":"MONDO:0019692","xrefs":{"Monarch":{"xref_id":"0019692"}}}


id: PBO:0050378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 2","termid":"PBO:0050378"}


id: MONDO:0001347
data:
  {"annotated_genes":["SJAG_02396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008030"}]},"cv_name":"mondo","definition":"An autosomal dominant disorder affecting the skeletal muscles of the face, scapula, and upper arm. Patients present with muscle weakness in these anatomic areas. The muscle weakness eventually spreads to other skeletal muscles as well.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005336"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84704","MEDGEN:65956","GARD:9941","MedDRA:10064087","NANDO:2200859","NANDO:1200491","icd11.foundation:621965073","UMLS:C0238288","DOID:11727","MESH:D020391","OMIMPS:158900","Orphanet:269","NORD:1116","SCTID:399091004"],"synonyms":[{"name":"FSH dystrophy","type":"exact"},{"name":"FSHD","type":"exact"},{"name":"Landouzy Dejerine muscular dystrophy","type":"exact"},{"name":"Landouzy-Dejerine muscular dystrophy","type":"exact"},{"name":"Landouzy-Dejerine myopathy","type":"exact"},{"name":"facioscapulohumeral dystrophy","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy","type":"exact"},{"name":"facioscapulohumeral myopathy","type":"exact"},{"name":"muscular dystrophy, Landouzy-Dejerine","type":"exact"}],"termid":"MONDO:0001347","terms_by_termid":{"MONDO:0008030":null},"xrefs":{"Monarch":{"xref_id":"0001347"}}}


id: GO:0003350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pulmonary myocardium over time, from its initial formation to the mature structure. The pulmonary myocardium is the myocardial tissue present in the pulmonary vein.","definition_xrefs":["GOC:dph","PMID:17638577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle tissue development","termid":"GO:0014706"},{"relation_name":"part_of","term_name":"venous blood vessel development","termid":"GO:0060841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary myocardium development","termid":"GO:0003350"}


id: GO:0106096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ceramide stimulus.","definition_xrefs":["PMID:18006463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ceramide","termid":"GO:0106096"}


id: PBO:0062185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 4C","termid":"PBO:0062185"}


id: PR:Q9HGM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04074","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ homolog subfamily C member 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.02c","secondary_identifiers":["UniProtKB:Q9HGM9"],"synonyms":[{"name":"Spom972h-DNAJC7","type":"exact"}],"termid":"PR:Q9HGM9"}


id: MONDO:0003626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare serous adenocarcinoma that arises from the uterine ligament.","definition_xrefs":["NCIT:C40136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine ligament adenocarcinoma","termid":"MONDO:0002741"},{"relation_name":"is_a","term_name":"cervical serous adenocarcinoma","termid":"MONDO:0003631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament serous adenocarcinoma","secondary_identifiers":["MEDGEN:275561","UMLS:C1519872","DOID:5747"],"synonyms":[{"name":"uterine ligament serous adenocarcinoma","type":"exact"}],"termid":"MONDO:0003626","xrefs":{"Monarch":{"xref_id":"0003626"}}}


id: MONDO:0011202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"RHYNS syndrome is characterized by the association of retinitis pigmentosa, hypopituitarism, nephronophthisis, and skeletal dysplasia.","definition_xrefs":["Orphanet:140976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"RHYNS syndrome","secondary_identifiers":["UMLS:C1865794","GARD:9681","MEDGEN:356371","MESH:C537612","OMIM:602152","SCTID:723999009"],"synonyms":[{"name":"RHYNS syndrome","type":"exact"},{"name":"retinitis pigmentosa syndrome","type":"related"},{"name":"retinitis pigmentosa, hypopituitarism, nephronophthisis, and mild skeletal dysplasia","type":"related"},{"name":"retinitis pigmentosa-hypopituitarism-nephronophthisis-skeletal dysplasia syndrome","type":"exact"}],"termid":"MONDO:0011202","xrefs":{"Monarch":{"xref_id":"0011202"}}}


id: PBO:0035922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_acetylation_during_vegetative_growth","termid":"PBO:0035922"}


id: PR:O13779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.14 gene.","definition_xrefs":["UniProtKB:O13779","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal ion transporter C17A12.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.14","synonyms":[{"name":"Spom972h-SPAC17A2.14","type":"exact"}],"termid":"PR:O13779"}


id: PBO:0044122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 8","termid":"PBO:0044122"}


id: PBO:0065867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB24, member RAS oncogene family","termid":"PBO:0065867"}


id: GO:0086090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential","type":"narrow"}],"termid":"GO:0086090"}


id: PBO:0072986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scinderin","termid":"PBO:0072986"}


id: GO:1905044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:TermGenie","GOC:BHF","PMID:22393241","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"}


id: MONDO:0006131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, WHO grade II cerebellar neoplasm which shows consistent neuronal, variable astrocytic and focal lipomatous differentiation. It occurs in adults, has a low proliferative potential and usually has a favorable prognosis. (Adapted from WHO)","definition_xrefs":["NCIT:C6905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar neoplasm","termid":"MONDO:0002913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar liponeurocytoma","secondary_identifiers":["ONCOTREE:CLNC","SCTID:716592003","ICDO:0000/0","EFO:1000159","UMLS:C1370507","DOID:6458","GARD:10642","Orphanet:251931","MEDGEN:237160"],"synonyms":[{"name":"CLNC","type":"related"},{"name":"cerebellar liponeurocytoma","type":"exact"},{"name":"cerebellar liponeurocytoma (WHO grade II)","type":"exact"},{"name":"lipomatous medulloblastoma","type":"exact"},{"name":"lipomatous medulloblastoma (formerly)","type":"related"}],"termid":"MONDO:0006131","xrefs":{"Monarch":{"xref_id":"0006131"}}}


id: GO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen of endogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:15928678","PMID:15928680","PMID:10375559","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous antigen","termid":"GO:0019883"},{"relation_name":"is_a","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation, endogenous lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, endogenous lipid antigen","type":"exact"},{"name":"endogenous lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048006"}


id: MONDO:0011054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive amelia is characterized by the absence of the upper limbs and severe underdevelopment of the lower limbs. Minor facial abnormalities (depressed nasal root, upturned nose, infra-orbital creases, prominent cheeks and micrognathia) were also reported. The syndrome has been described in three fetuses born to non consanguineous parents.","definition_xrefs":["Orphanet:1027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"autosomal recessive amelia","secondary_identifiers":["MESH:C563338","UMLS:C1832432","GARD:16554","SCTID:726735000","MEDGEN:321955","OMIM:601360"],"synonyms":[{"name":"Amelia, posterior, with pelvic and pulmonary hypoplasia syndrome","type":"exact"},{"name":"amelia, autosomal recessive","type":"related"}],"termid":"MONDO:0011054","xrefs":{"Monarch":{"xref_id":"0011054"}}}


id: PBO:0089869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1754 family, human FAM32A homolog, implicated in mRNA splicing","termid":"PBO:0089869"}


id: GO:0070893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a transposable element is incorporated into another DNA molecule such as a chromosome.","definition_xrefs":["GOC:jp","PMID:10882723"],"gene_count":0,"genotype_count":0,"name":"obsolete transposon integration (obsolete GO:0070893)","termid":"GO:0070893"}


id: PBO:0076269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse associated protein 1","termid":"PBO:0076269"}


id: GO:2000413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000413"}


id: FYPO:0005123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from late meiotic genes measured in a cell is lower than normal during the meiotic cell cycle. Late meiotic genes are normally transcribed during spore maturation.","definition_xrefs":["PMID:17927811","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of late meiotic gene mRNA during meiotic cell cycle","synonyms":[{"name":"decreased level of late meiosis gene mRNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of late meiotic gene RNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of late meiotic gene transcripts during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005123"}


id: GO:0005647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, alpha-subunit (obsolete GO:0005647)","synonyms":[{"name":"importin, alpha-subunit","type":"exact"},{"name":"karyopherin-alpha","type":"exact"}],"termid":"GO:0005647"}


id: PBO:0073191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T pseudogene 2","termid":"PBO:0073191"}


id: SO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is involved in the regulation of transcription of a group of regulated genes.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000752 gene_group_regulatory_region (obsolete SO:0000752)","synonyms":[{"name":"gene group regulatory region","type":"exact"}],"termid":"SO:0000752"}


id: MONDO:0020695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of cerebral palsy characterized by decreased muscle tone.","definition_xrefs":["NCIT:C116906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral palsy","termid":"MONDO:0006497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotonic cerebral palsy","secondary_identifiers":["UMLS:C0394007","SCTID:192958009","MEDGEN:98296"],"synonyms":[{"name":"hypotonic cerebral palsy","type":"exact"}],"termid":"MONDO:0020695","xrefs":{"Monarch":{"xref_id":"0020695"}}}


id: GO:0070954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated cytotoxicity","termid":"GO:0070948"},{"relation_name":"negatively_regulates","term_name":"neutrophil mediated cytotoxicity","termid":"GO:0070942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated cytotoxicity","synonyms":[{"name":"down regulation of neutrophil mediated cytotoxicity","type":"exact"},{"name":"down-regulation of neutrophil mediated cytotoxicity","type":"exact"},{"name":"downregulation of neutrophil mediated cytotoxicity","type":"exact"},{"name":"inhibition of neutrophil mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070954"}


id: PBO:0042551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 14","termid":"PBO:0042551"}


id: FYPO:0007345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from euchromatic regions measured in a cell is higher than normal.","definition_xrefs":["PMID:18957202","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased euchromatin-derived RNA level","synonyms":[{"name":"increased accumulation of euchromatin-derived RNAs","type":"related"},{"name":"increased euchromatin-derived RNA accumulation","type":"related"},{"name":"increased euchromatin-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased euchromatin-derived RNA level during vegetative growth","type":"exact"},{"name":"increased euchromatin-derived transcript level","type":"exact"},{"name":"increased level of RNA transcribed from euchromatin","type":"exact"}],"termid":"FYPO:0007345"}


id: GO:0046895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of the N-terminal isoleucine of proteins to form the derivative N-methyl-L-isoleucine.","definition_xrefs":["RESID:AA0336"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-isoleucine methylation (obsolete GO:0046895)","termid":"GO:0046895"}


id: MOD:00824
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to dehydroalanine.","definition_xrefs":["PubMed:8239649","RESID:AA0181#TYR","PubMed:2914619","PubMed:1547888","PubMed:10220322","PubMed:6838602","PubMed:1815586","PubMed:7947813","Unimod:400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Tyr)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla(Tyr)","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:00824"}


id: PBO:0083521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PAC2/YER007W","termid":"PBO:0083521"}


id: PBO:0050428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K","termid":"PBO:0050428"}


id: PBO:0074353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 2","termid":"PBO:0074353"}


id: PBO:0062658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 8","termid":"PBO:0062658"}


id: PBO:0038828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 1","termid":"PBO:0038828"}


id: MONDO:0020603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genodermatosis with great phenotypic variation and characterized most commonly by ichthyosis, chondrodysplasia punctata (CDP), asymmetric shortening of the limbs, cataracts and short stature.","definition_xrefs":["Orphanet:35173"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"is_a","term_name":"X-linked chondrodysplasia punctata","termid":"MONDO:0010556"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0002525"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata 2","secondary_identifiers":["MEDGEN:79381","GARD:6189","OMIM:302960","NORD:1005","NANDO:2201357","DOID:0080352","UMLS:C0282102","NANDO:1200630"],"synonyms":[{"name":"CDPX2","type":"exact"},{"name":"CDPXD","type":"exact"},{"name":"Conrad Hunermann Happle syndrome","type":"exact"},{"name":"Conradi Hunermann syndrome","type":"exact"},{"name":"Conradi Hünermann Syndrome","type":"exact"},{"name":"Conradi-Hunermann syndrome","type":"exact"},{"name":"Conradi-Hunermann-Happle syndrome","type":"exact"},{"name":"Conradi-Hünermann-Happle syndrome","type":"exact"},{"name":"EBP chondrodysplasia punctata","type":"exact"},{"name":"Happle syndrome","type":"exact"},{"name":"X-linked chondrodysplasia punctata type 2","type":"exact"},{"name":"chondrodysplasia punctata 2 X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata 2, X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata caused by mutation in EBP","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant, X-linked dominant","type":"exact"}],"termid":"MONDO:0020603","xrefs":{"Monarch":{"xref_id":"0020603"}}}


id: PBO:0054115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1480","termid":"PBO:0054115"}


id: PATO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female pseudohermaphrodite","termid":"PATO:0001829"}


id: GO:0051675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pullulan to isopanose (6-alpha-maltosylglucose).","definition_xrefs":["EC:3.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"isopullulanase activity","secondary_identifiers":["MetaCyc:3.2.1.57-RXN"],"synonyms":[{"name":"pullulan 4-glucanohydrolase (isopanose-forming) activity","type":"exact"}],"termid":"GO:0051675"}


id: PBO:0113366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates Arf1p and Arf2p to facilitate Golgi trafficking; binds phosphatidylinositol 4-phosphate, which plays a role in TGN localization; K63-specific Ub chain binding receptor with moderate selectivity; homologous to gamma-adaptin; GGA2 has a paralog, GGA1, that arose from the whole genome duplication","termid":"PBO:0113366"}


id: PBO:0041457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf71 antisense RNA 1","termid":"PBO:0041457"}


id: GO:0034776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histamine stimulus. Histamine, the biogenic amine 2-(1H-imidazol-4-yl)ethanamine, is involved in local immune responses as well as regulating physiological function in the gut and acting as a neurotransmitter.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to histamine","synonyms":[{"name":"response to histamine stimulus","type":"exact"}],"termid":"GO:0034776"}


id: PBO:0063373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 1A, choline","termid":"PBO:0063373"}


id: MONDO:0009213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCC gene. This gene provides instructions for making a protein that delays the onset of apoptosis and promotes homologous recombination repair of damaged DNA.","definition_xrefs":["NCIT:C125704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0021190","MONDO:0002280","MONDO:0005066"],"is_obsolete":false,"name":"Fanconi anemia complementation group C","secondary_identifiers":["GARD:15168","MEDGEN:483324","UMLS:C3468041","OMIM:227645","DOID:0111087"],"synonyms":[{"name":"FA3","type":"exact"},{"name":"FACC","type":"exact"},{"name":"FANCC","type":"exact"},{"name":"Fanconi Anemia, complementation group type C","type":"exact"},{"name":"Fanconi anaemia complementation group type C","type":"exact"},{"name":"Fanconi anemia complementation group C","type":"exact"},{"name":"Fanconi anemia complementation group type C","type":"exact"},{"name":"Fanconi anemia, complementation group C","type":"related"},{"name":"Fanconi pancytopenia type 3","type":"exact"},{"name":"Fanconi pancytopenia, type 3","type":"related"},{"name":"facc","type":"related"}],"termid":"MONDO:0009213","xrefs":{"Monarch":{"xref_id":"0009213"}}}


id: MONDO:0002493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma of the prostate gland composed of secretory cells. It is the most common histologic type of prostate adenocarcinoma. Several morphologic variants exist, including atrophic, pseudohyperplastic, foamy gland, and oncocytic variants.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acinar cell carcinoma","termid":"MONDO:0004965"},{"relation_name":"is_a","term_name":"prostate adenocarcinoma","termid":"MONDO:0005082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostatic acinar adenocarcinoma","secondary_identifiers":["DOID:3024","NCIT:C5596","MEDGEN:231350","UMLS:C1332139"],"synonyms":[{"name":"acinar adenocarcinoma of prostate","type":"exact"},{"name":"acinar adenocarcinoma of the prostate","type":"exact"},{"name":"acinar prostate adenocarcinoma","type":"exact"},{"name":"prostate acinar adenocarcinoma","type":"exact"},{"name":"prostatic acinar adenocarcinoma","type":"exact"}],"termid":"MONDO:0002493","xrefs":{"Monarch":{"xref_id":"0002493"}}}


id: MONDO:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete elliptocytosis (obsolete MONDO:0000020)","termid":"MONDO:0000020","xrefs":{"Monarch":{"xref_id":"0000020"}}}


id: PATO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the degree of the bearer's  highly topographical with ridges, pits, rugosity or other surface structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornamentation","termid":"PATO:0002440"}


id: PR:O00087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyl dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyl dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.09c","secondary_identifiers":["UniProtKB:O00087"],"synonyms":[{"name":"DLDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLD","type":"exact"},{"name":"dihydrolipoamide dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00087"}


id: GO:0016989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to a sigma factor and stopping, preventing or reducing the rate of its transcriptional activity.","definition_xrefs":["Wikipedia:Anti-sigma_factors","GOC:jl","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription corepressor activity","termid":"GO:0003714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003714"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003712"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003714","GO:0060090","GO:0030674","GO:0003712","GO:0003674","GO:0140110"],"is_obsolete":false,"name":"sigma factor antagonist activity","synonyms":[{"name":"anti-sigma factor activity","type":"exact"}],"termid":"GO:0016989"}


id: PBO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Dim1","termid":"PBO:0005309"}


id: MONDO:0009780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal omphalocele-cleft palate syndrome is characterized by the association of omphalocele and cleft palate. It has been described in three daughters of normal unrelated parents. They were all diagnosed at birth. One had omphalocele, posterior cleft palate, and uterus bicornuatus; she died at 2 months. The second had omphalocele, cleft uvula, and hydrocephalus and died at 4 months; the third had omphalocele and cleft palate and died at 1 year. This syndrome is likely to be inherited as an autosomal recessive condition.","definition_xrefs":["Orphanet:2736"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal omphalocele-cleft palate syndrome","secondary_identifiers":["SCTID:719408007","MEDGEN:376757","MESH:C537747","OMIM:258320","GARD:4079","UMLS:C1850317"],"synonyms":[{"name":"Czeizel syndrome","type":"exact"},{"name":"cleft palate-omphalocele syndrome, lethal","type":"related"},{"name":"omphalocele cleft palate syndrome lethal","type":"related"},{"name":"omphalocele-cleft palate syndrome, lethal","type":"related"}],"termid":"MONDO:0009780","xrefs":{"Monarch":{"xref_id":"0009780"}}}


id: MONDO:0019102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dentinogenesis imperfecta-short stature-hearing loss-intellectual disability syndrome is characterized by the association of dentinogenesis imperfecta, delayed tooth eruption, facial dysmorphology, small stature, sensorineural hearing loss and mild intellectual deficit. It has been described in two brothers born to consanguineous parents. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:71267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentinogenesis imperfecta-short stature-hearing loss-intellectual disability syndrome","secondary_identifiers":["MEDGEN:929261","GARD:18909","SCTID:721089006","UMLS:C4303592"],"termid":"MONDO:0019102","xrefs":{"Monarch":{"xref_id":"0019102"}}}


id: PBO:0044313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561 family member D1","termid":"PBO:0044313"}


id: FYPO:0007232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication from early-firing origins is abnormal.","definition_xrefs":["PomBase:mah","PMID:22279046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation from early origin","synonyms":[{"name":"abnormal regulation of DNA replication initiation from early origin during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of early origin firing timing","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation at early origin","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from early origin during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from early replication origin","type":"exact"}],"termid":"FYPO:0007232"}


id: SO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif that contains a core consensus sequence AGGTAAGGGTAATGCAC, is found in the intergenic regions of rDNA repeats, and is bound by an RNA polymerase I transcription termination factor (e.g. S. pombe Reb1). The S. pombe telomeric repeat consensus is TTAC(0-1)A(0-1)G(1-8).","definition_xrefs":["ISBN:978-0199638901","PMID:9016645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rDNA_intergenic_spacer_element","synonyms":[{"name":"rDIS","type":"exact"}],"termid":"SO:0001860"}


id: MONDO:0013179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, complex form of hereditary spastic paraplegia characterized by a late-onset, slowly progressive spastic paraplegia associated with mild ataxia and dysarthria, upper extremity involvement (i.e. loss of finger dexterity, dysmetria), and mild cognitive impairment, without the presence of nystagmus. A hypomyelinating leukodystrophy and thin corpus callosum is observed in all cases and psychomotor development is normal or near normal. SPG44 is caused by mutations in the GJC2 gene (1q41-q42) encoding the gap junction gamma-2 protein.","definition_xrefs":["Orphanet:320401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 44","secondary_identifiers":["MEDGEN:413042","OMIM:613206","SCTID:723821002","UMLS:C2750784","MESH:C567707","DOID:0110796","GARD:17478"],"synonyms":[{"name":"GJC2 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG44","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in GJC2","type":"exact"},{"name":"autosomal recessive spastic paraplegia 44","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 44","type":"related"},{"name":"hereditary spastic paraplegia type 44","type":"exact"},{"name":"spastic paraplegia 44, autosomal recessive","type":"related"}],"termid":"MONDO:0013179","xrefs":{"Monarch":{"xref_id":"0013179"}}}


id: PBO:0005494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jmjc domain chromatin associated protein Epe1","termid":"PBO:0005494"}


id: MONDO:0008204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete patella aplasia, coxa vara, and tarsal synostosis (obsolete MONDO:0008204)","secondary_identifiers":["MESH:C536307","OMIM:168850"],"synonyms":[{"name":"patella aplasia, coxa vara, and tarsal synostosis","type":"related"}],"termid":"MONDO:0008204","xrefs":{"Monarch":{"xref_id":"0008204"}}}


id: MONDO:0859187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and brain abnormalities","secondary_identifiers":["OMIM:619512","UMLS:C5561977","MEDGEN:1794187"],"termid":"MONDO:0859187","xrefs":{"Monarch":{"xref_id":"0859187"}}}


id: GO:0070372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:add","ISBN:0121245462","ISBN:0896039986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"regulation of ERK cascade","type":"broad"},{"name":"regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"regulation of ERK1 cascade","type":"narrow"},{"name":"regulation of ERK1/2 cascade","type":"exact"},{"name":"regulation of ERK2 cascade","type":"narrow"},{"name":"regulation of MAPK1 cascade","type":"narrow"},{"name":"regulation of MAPK3 cascade","type":"narrow"}],"termid":"GO:0070372"}


id: PBO:0050005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIVEP2 divergent transcript","termid":"PBO:0050005"}


id: MONDO:0021257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glomus jugulare neoplasm (obsolete MONDO:0021257)","termid":"MONDO:0021257","xrefs":{"Monarch":{"xref_id":"0021257"}}}


id: PBO:0090927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G Mef2","termid":"PBO:0090927"}


id: PBO:0039808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4","termid":"PBO:0039808"}


id: PBO:0075190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 2","termid":"PBO:0075190"}


id: MONDO:0007094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the LAMB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 1A","secondary_identifiers":["DOID:0110054","GARD:15038","MEDGEN:859840","MESH:C538240","UMLS:C4011403","OMIM:104530"],"synonyms":[{"name":"AI1A","type":"exact"},{"name":"LAMB3 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in LAMB3","type":"exact"},{"name":"amelogenesis imperfecta hypoplastic type IA","type":"exact"},{"name":"amelogenesis imperfecta local hypoplastic","type":"related"},{"name":"amelogenesis imperfecta type IA","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic type 1A","type":"related"},{"name":"amelogenesis imperfecta, type 1A","type":"related"},{"name":"amelogenesis imperfecta, type IA","type":"related"},{"name":"local hypoplastic amelogenesis imperfecta","type":"related"}],"termid":"MONDO:0007094","xrefs":{"Monarch":{"xref_id":"0007094"}}}


id: PBO:0061599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of ubiquitin like proteins 1","termid":"PBO:0061599"}


id: GO:0009028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glyoxylate + H+ = 2-hydroxy-3-oxopropanoate + CO2.","definition_xrefs":["RHEA:10136","EC:4.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"tartronate-semialdehyde synthase activity","secondary_identifiers":["KEGG_REACTION:R00013","MetaCyc:GLYOCARBOLIG-RXN"],"synonyms":[{"name":"glyoxalate carboligase activity","type":"related"},{"name":"glyoxylate carbo-ligase activity","type":"related"},{"name":"glyoxylate carboligase activity","type":"related"},{"name":"glyoxylate carboxy-lyase (dimerizing)","type":"related"},{"name":"glyoxylate carboxy-lyase (dimerizing; tartronate-semialdehyde-forming)","type":"related"},{"name":"glyoxylic carbo-ligase activity","type":"related"},{"name":"hydroxymalonic semialdehyde carboxylase activity","type":"related"},{"name":"tartronate semialdehyde carboxylase activity","type":"related"},{"name":"tartronic semialdehyde carboxylase activity","type":"related"}],"termid":"GO:0009028"}


id: GO:0021788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the neural tube is directed to a specific target site in the neural tube in response to an attractive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dph","GOC:dgh","PMID:14699587","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in neural tube","termid":"GO:0021786"},{"relation_name":"is_a","term_name":"chemoattraction of branchiomotor axon","termid":"GO:0021792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor neuron axon in neural tube","synonyms":[{"name":"positive chemotaxis of branchiomotor neuron axon in neural tube","type":"exact"}],"termid":"GO:0021788"}


id: PBO:0057153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 301a","termid":"PBO:0057153"}


id: FYPO:0001997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}


id: PBO:0049482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.6 linker histone, cluster member","termid":"PBO:0049482"}


id: PBO:0061879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 2","termid":"PBO:0061879"}


id: GO:0031961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear cortisol receptor.","definition_xrefs":["GOC:mah","PMID:12511169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear glucocorticoid receptor binding","termid":"GO:0035259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nuclear cortisol receptor binding","synonyms":[{"name":"cortisol receptor binding","type":"broad"}],"termid":"GO:0031961"}


id: MONDO:0971133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infantile hemangioma of rare localization","termid":"MONDO:0016223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated segmental infantile hemangioma","secondary_identifiers":["Orphanet:675380"],"termid":"MONDO:0971133","xrefs":{"Monarch":{"xref_id":"0971133"}}}


id: MONDO:1010566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, Japanese quail","secondary_identifiers":["OMIA:000278-93934"],"termid":"MONDO:1010566","xrefs":{"Monarch":{"xref_id":"1010566"}}}


id: PBO:0064140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N1","termid":"PBO:0064140"}


id: PBO:0069971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1266, pseudogene","termid":"PBO:0069971"}


id: MONDO:0011343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular atrophoderma, perioral pigmented, with milia and epidermoid cysts","secondary_identifiers":["UMLS:C1863692","MESH:C566360","MEDGEN:350955","OMIM:603587"],"synonyms":[{"name":"follicular atrophoderma, perioral pigmented, with milia and epidermoid cysts","type":"exact"}],"termid":"MONDO:0011343","xrefs":{"Monarch":{"xref_id":"0011343"}}}


id: PBO:0084967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase; plays a catalytic role in oxidation of cytoplasmic one-carbon units; expression is regulated by Bas1p and Bas2p, repressed by adenine, and may be induced by inositol and choline","termid":"PBO:0084967"}


id: PBO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 1","termid":"PBO:0052076"}


id: PBO:0049165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 7","termid":"PBO:0049165"}


id: GO:1990105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of voltage-gated potassium channel activity.","definition_xrefs":["PMID:19219384"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of voltage-gated potassium channel activity (obsolete GO:1990105)","synonyms":[{"name":"regulation of voltage-gated potassium channel activity","type":"exact"}],"termid":"GO:1990105"}


id: PBO:0029864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0029864"}


id: GO:0004821
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78559],"is_not":false,"summary":null,"term":"GO:0004821"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His).","definition_xrefs":["EC:6.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0140098","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"histidine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:17313","MetaCyc:HISTIDINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380234","Reactome:R-HSA-379844"],"synonyms":[{"name":"L-histidine:tRNAHis ligase (AMP-forming)","type":"related"},{"name":"histidine translase activity","type":"related"},{"name":"histidyl-tRNA synthetase activity","type":"exact"},{"name":"histidyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004821","terms_by_termid":{"GO:0004821":null}}


id: FYPO:0003136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more plasma membrane than normal. Excess plasma membrane may appear as bubble-like structures inside the cell, and may be concentrated in the mating projection during conjugation.","definition_xrefs":["PMID:19627505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"excess plasma membrane present","synonyms":[{"name":"excess mating projection membrane present","type":"narrow"},{"name":"excess plasma membrane present during mitotic cell cycle","type":"related"},{"name":"excess plasma membrane present during vegetative growth","type":"exact"},{"name":"increased invagination of the plasma membrane","type":"narrow"},{"name":"internal membrane bubbles present","type":"related"}],"termid":"FYPO:0003136"}


id: GO:0099067
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic endosome membrane (obsolete GO:0099067)","termid":"GO:0099067"}


id: PBO:0002968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine biosynthesis protein","termid":"PBO:0002968"}


id: GO:0019921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of carboxy-terminal peptidyl-1-thioglycine, which has a carboxy-terminal thiocarboxy-C(=O)-SH bond.","definition_xrefs":["GOC:go_curators","PMID:10660523","RESID:AA0265"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-1-thioglycine biosynthetic process, carboxy-terminal (obsolete GO:0019921)","synonyms":[{"name":"peptidyl-1-thioglycine anabolism, carboxy-terminal","type":"exact"},{"name":"peptidyl-1-thioglycine formation, carboxy-terminal","type":"exact"},{"name":"peptidyl-1-thioglycine synthesis, carboxy-terminal","type":"exact"}],"termid":"GO:0019921"}


id: FYPO:0000780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"},{"relation_name":"is_a","term_name":"abnormal transcription during vegetative growth","termid":"FYPO:0004064"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription during vegetative growth","synonyms":[{"name":"increased transcription during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000780"}


id: PBO:0049162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 4","termid":"PBO:0049162"}


id: GO:0009424
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the bacterial-type flagellum that connects the filament to the basal body.","definition_xrefs":["PMID:10572114","GOC:cilia","PMID:12624192","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum","termid":"GO:0009288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum hook","synonyms":[{"name":"flagellar hook","type":"exact"},{"name":"flagellin-based flagellum hook","type":"exact"}],"termid":"GO:0009424"}


id: PBO:0045189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 2","termid":"PBO:0045189"}


id: MONDO:0013094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 5","secondary_identifiers":["UMLS:C2751640","OMIM:613030","MEDGEN:414430"],"synonyms":[{"name":"GLM5","type":"exact"},{"name":"glioma susceptibility 5","type":"exact"}],"termid":"MONDO:0013094","xrefs":{"Monarch":{"xref_id":"0013094"}}}


id: GO:0061800
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular fiber formed from fibronectin molecules. The fibrils are 5 to 25nm in diameter and can form branched meshworks.","definition_xrefs":["PMID:20690820","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fibronectin fibril","termid":"GO:0061800"}


id: GO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cleistothecium over time, from its formation to the mature structure. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["ISBN:0471522295","PMID:17446882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium development","termid":"GO:0070791"}


id: PBO:0086993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon-interacting protein; ER integral membrane protein involved in the generation of tubular ER morphology; promotes membrane curvature; forms tubules in vitro; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; interacts with Yip1p to mediate membrane traffic and with Sey1p to maintain ER morphology; facilitates lipid exchange between the ER and mitochondria; forms ER foci upon DNA replication stress","termid":"PBO:0086993"}


id: GO:0120337
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the radial spoke 2 that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary axoneme.","definition_xrefs":["PMID:22754630","PMID:348711799","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke head","termid":"GO:0001535"},{"relation_name":"part_of","term_name":"radial spoke 2","termid":"GO:0120334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"radial spoke head 2","synonyms":[{"name":"radial spokehead 2","type":"exact"}],"termid":"GO:0120337"}


id: PBO:0047365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 19","termid":"PBO:0047365"}


id: PBO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Scd1","termid":"PBO:0002090"}


id: PBO:0057858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3169","termid":"PBO:0057858"}


id: FYPO:0000760
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119098,119101],"is_not":false,"summary":null,"term":"FYPO:0000760"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"mating phenotype","termid":"FYPO:0000301"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000301"],"is_obsolete":false,"name":"normal mating","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"normal conjugation","type":"exact"},{"name":"normal conjugation with cellular fusion","type":"exact"},{"name":"normal zygote formation","type":"related"}],"termid":"FYPO:0000760","terms_by_termid":{"FYECO:0000015":null,"FYPO:0000760":null}}


id: MONDO:1010550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent urachus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent urachus, non-human animal","termid":"MONDO:1010046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent urachus, dog","secondary_identifiers":["OMIA:000781-9615"],"termid":"MONDO:1010550","xrefs":{"Monarch":{"xref_id":"1010550"}}}


id: MONDO:0958353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of congenital muscular dystrophy characterized by congenital weakness, hypotonia, proximal joint contractures, marked hyperlaxity of the distal joints, attainment of independent ambulation which is subsequently lost and uniform respiratory insufficiency during the teenage years.","definition_xrefs":["Orphanet:646113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen 6-related congenital muscular dystrophy","termid":"MONDO:0958077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"intermediate collagen VI-related muscular dystrophy","secondary_identifiers":["UMLS:C5816698","MEDGEN:1853152"],"termid":"MONDO:0958353","xrefs":{"Monarch":{"xref_id":"0958353"}}}


id: PBO:0073345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 7","termid":"PBO:0073345"}


id: GO:0034683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta3 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alphav-beta3 complex","synonyms":[{"name":"ITGAV-ITGB3 complex","type":"narrow"},{"name":"alphav-beta3 integrin complex","type":"exact"}],"termid":"GO:0034683"}


id: GO:1902203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:18819921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of hepatocyte growth factor receptor signaling pathway","termid":"GO:1902202"},{"relation_name":"negatively_regulates","term_name":"hepatocyte growth factor receptor signaling pathway","termid":"GO:0048012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"down regulation of HGF receptor signaling pathway","type":"exact"},{"name":"down regulation of HGF receptor signalling pathway","type":"exact"},{"name":"down regulation of Met signaling pathway","type":"narrow"},{"name":"down regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of HGF receptor signaling pathway","type":"exact"},{"name":"down-regulation of HGF receptor signalling pathway","type":"exact"},{"name":"down-regulation of Met signaling pathway","type":"narrow"},{"name":"down-regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of HGF receptor signaling pathway","type":"exact"},{"name":"downregulation of HGF receptor signalling pathway","type":"exact"},{"name":"downregulation of Met signaling pathway","type":"narrow"},{"name":"downregulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of HGF receptor signaling pathway","type":"exact"},{"name":"inhibition of HGF receptor signalling pathway","type":"exact"},{"name":"inhibition of Met signaling pathway","type":"narrow"},{"name":"inhibition of hepatocyte growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of HGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of HGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of Met signaling pathway","type":"narrow"}],"termid":"GO:1902203"}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: MONDO:0002290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the clitoris.","definition_xrefs":["NCIT:C3557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulva cancer","termid":"MONDO:0001528"},{"relation_name":"is_a","term_name":"clitoris neoplasm","termid":"MONDO:0024877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clitoris cancer","secondary_identifiers":["ICD9:184.3","SCTID:371979001","UMLS:C0153589","MEDGEN:56312","DOID:2401"],"synonyms":[{"name":"cancer of clitoris","type":"exact"},{"name":"carcinoma of clitoris","type":"narrow"},{"name":"clitoral Ca","type":"exact"},{"name":"clitoris cancer","type":"exact"},{"name":"malignant clitoral neoplasm","type":"exact"},{"name":"malignant clitoral tumor","type":"exact"},{"name":"malignant clitoral tumour","type":"exact"},{"name":"malignant clitoris neoplasm","type":"exact"},{"name":"malignant clitoris tumor","type":"exact"},{"name":"malignant clitoris tumour","type":"exact"},{"name":"malignant neoplasm of clitoris","type":"exact"},{"name":"malignant neoplasm of the clitoris","type":"exact"},{"name":"malignant tumor of clitoris","type":"exact"},{"name":"malignant tumor of the clitoris","type":"exact"},{"name":"malignant tumour of clitoris","type":"exact"},{"name":"malignant tumour of the clitoris","type":"exact"}],"termid":"MONDO:0002290","xrefs":{"Monarch":{"xref_id":"0002290"}}}


id: PBO:0073249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 2 pseudogene 1","termid":"PBO:0073249"}


id: SO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A left handed helix is a region of peptide where the coiled conformation turns in an anticlockwise, left handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"left_handed_peptide_helix","secondary_identifiers":["BS:00222"],"synonyms":[{"name":"helix-l","type":"related"},{"name":"left handed helix","type":"exact"}],"termid":"SO:0001115"}


id: PBO:0029441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_metabolic_process","termid":"PBO:0029441"}


id: PR:Q10205
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP43 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03662","PANTHER:PTHR11097:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.03c","secondary_identifiers":["UniProtKB:Q10205"],"synonyms":[{"name":"Spom972h-EXOSC8","type":"exact"},{"name":"ribosomal RNA-processing protein 43 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10205"}


id: PBO:0058842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8071-2","termid":"PBO:0058842"}


id: PBO:0049594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 12","termid":"PBO:0049594"}


id: MONDO:1011524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, pig","secondary_identifiers":["OMIA:000437-9823"],"termid":"MONDO:1011524","xrefs":{"Monarch":{"xref_id":"1011524"}}}


id: PBO:0034090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paralogy_relationship_with","termid":"PBO:0034090"}


id: SO:1000138
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A compound chromosome whereby two copies of the same chromosomal arm attached to a common centromere. The chromosome is diploid for the arm involved.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound_chromosome","termid":"SO:1000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homo_compound_chromosome","synonyms":[{"name":"homo compound chromosome","type":"exact"},{"name":"homo-compound chromosome","type":"exact"}],"termid":"SO:1000138"}


id: MONDO:0017411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal inflammatory skin and bowel disease is a rare, life-threatening, autoinflammatory syndrome with immune deficiency disorder characterized by early-onset, life-long inflammation, affecting the skin and bowel, associated with recurrent infections. Patients present perioral and perianal psoriasiform erythema and papular eruption with pustules, failure to thrive associated with chronic malabsorptive diarrhea, intercurrent gastrointestinal infections and feeding troubles, as well as absent, short or broken hair and trichomegaly. Recurrent cutaneous and pulmonary infections lead to recurrent blepharitis, otitis externa and bronchiolitis.","definition_xrefs":["Orphanet:294023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093","MONDO:0004335"],"is_obsolete":false,"name":"neonatal inflammatory skin and bowel disease","secondary_identifiers":["MEDGEN:1648296","UMLS:C4751120","GARD:17355","OMIMPS:614328"],"synonyms":[{"name":"inflammatory skin and bowel disease, neonatal","type":"exact"}],"termid":"MONDO:0017411","xrefs":{"Monarch":{"xref_id":"0017411"}}}


id: PBO:0069085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 332, pseudogene","termid":"PBO:0069085"}


id: PBO:0079269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39B","termid":"PBO:0079269"}


id: MONDO:0015875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non-malformative uterine adnexal disease (obsolete MONDO:0015875)","secondary_identifiers":["Orphanet:180303"],"termid":"MONDO:0015875","xrefs":{"Monarch":{"xref_id":"0015875"}}}


id: PBO:0041640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 G","termid":"PBO:0041640"}


id: GO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The narrow gap that separates the presynaptic and postsynaptic membranes, into which neurotransmitter is released.","definition_xrefs":["PMID:30784960","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"synaptic cleft","secondary_identifiers":["NIF_Subcellular:sao243541954"],"termid":"GO:0043083"}


id: SO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 8th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["SO:KE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K8_acetylation_site","synonyms":[{"name":"H4K8 acetylation site","type":"exact"},{"name":"H4K8ac","type":"exact"}],"termid":"SO:0001731"}


id: FYPO:0006988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal at transposable elements.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at transposable element during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at transposable element during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 dimethylation at transposon during vegetative growth","type":"exact"},{"name":"increased histone H3K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at transposable element during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006988"}


id: PBO:0053126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCORL pseudogene 1","termid":"PBO:0053126"}


id: GO:0071702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of organic substances into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore. An organic substance is a molecular entity that contains carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance transport (obsolete GO:0071702)","termid":"GO:0071702"}


id: PBO:0050242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 20","termid":"PBO:0050242"}


id: PBO:0040865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix ARNT like 2","termid":"PBO:0040865"}


id: PBO:0004541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,6-beta-glucosidase Exg1","termid":"PBO:0004541"}


id: MONDO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the coronary artery lumen diameter.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary stenosis","secondary_identifiers":["MEDGEN:66859","SCTID:233970002","NANDO:2200246","MESH:D023921","UMLS:C0242231","DOID:4248","MedDRA:10011089"],"synonyms":[{"name":"coronary artery stenosis","type":"exact"}],"termid":"MONDO:0006715","xrefs":{"Monarch":{"xref_id":"0006715"}}}


id: GO:0034012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD = AMP + H+ + riboflavin cyclic-4',5'-phosphate.","definition_xrefs":["RHEA:13729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0009975","GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"FAD-AMP lyase (cyclizing) activity","secondary_identifiers":["EC:4.6.1.15"],"synonyms":[{"name":"FAD AMP-lyase (cyclic-FMN-forming) activity","type":"related"},{"name":"FAD AMP-lyase (riboflavin-cyclic-4',5'-phosphate-forming) activity","type":"related"},{"name":"FMN cyclase activity","type":"related"}],"termid":"GO:0034012"}


id: GO:0097294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of XMP, xanthosine monophosphate, from simpler precursors.","definition_xrefs":["PMID:27590927","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"XMP biosynthetic process","termid":"GO:0097293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"'de novo' XMP biosynthetic process","synonyms":[{"name":"'de novo' XMP anabolism","type":"exact"},{"name":"'de novo' XMP biosynthesis","type":"exact"},{"name":"'de novo' XMP formation","type":"exact"},{"name":"'de novo' XMP synthesis","type":"exact"}],"termid":"GO:0097294"}


id: GO:0048378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048378"}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: PBO:0078773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-5","termid":"PBO:0078773"}


id: RO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c is marker for d iff the presence or occurrence of d is correlated with the presence of occurrence of c, and the observation of c is used to infer the presence or occurrence of d. Note that this does not imply that c and d are in a direct causal relationship, as it may be the case that there is a third entity e that stands in a direct causal relationship with c and d.","direct_ancestors":[{"relation_name":"is_a","term_name":"correlated_with","termid":"RO:0002610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_marker_for","termid":"RO:0002607"}


id: MONDO:1011487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 3 deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement component 3 deficiency, non-human animal","termid":"MONDO:1011421"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 3 deficiency, dog","secondary_identifiers":["OMIA:000155-9615"],"synonyms":[{"name":"C3 deficiency, dog","type":"exact"}],"termid":"MONDO:1011487","xrefs":{"Monarch":{"xref_id":"1011487"}}}


id: PBO:0031908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChAPs family protein Cfp1","termid":"PBO:0031908"}


id: PR:O74538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2702 gene.","definition_xrefs":["UniProtKB:O74538","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.05","synonyms":[{"name":"Spom972h-rpl2702","type":"exact"}],"termid":"PR:O74538"}


id: PBO:0063625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 1","termid":"PBO:0063625"}


id: MONDO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A punctate palmoplantar keratoderma that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated punctate palmoplantar keratoderma (obsolete MONDO:0016518)","secondary_identifiers":["Orphanet:2338"],"synonyms":[{"name":"isolated punctate PPK","type":"exact"},{"name":"isolated punctate palmoplantar hyperkeratosis","type":"exact"},{"name":"nonsyndromic punctate palmoplantar keratoderma","type":"exact"}],"termid":"MONDO:0016518","xrefs":{"Monarch":{"xref_id":"0016518"}}}


id: MONDO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic meningitis","secondary_identifiers":["SCTID:445059005","UMLS:C0854214","ICD9:320.81","MEDGEN:678523","DOID:14559"],"synonyms":[{"name":"meningitis caused by anaerobic bacteria","type":"exact"},{"name":"meningitis due to anaerobic bacteria","type":"exact"}],"termid":"MONDO:0002000","xrefs":{"Monarch":{"xref_id":"0002000"}}}


id: PR:Q09909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.09","synonyms":[{"name":"Spom972h-cwf19","type":"exact"},{"name":"complexed with cdc5 protein 19 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09909"}


id: PBO:0072884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 2","termid":"PBO:0072884"}


id: GO:0050793
data:
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