# terms

id: MONDO:0033652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 17","secondary_identifiers":["UMLS:C5436718","GARD:16414","DOID:0070502","MEDGEN:1730423","OMIM:619061"],"synonyms":[{"name":"MC4DN17","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 17","type":"exact"}],"termid":"MONDO:0033652","xrefs":{"Monarch":{"xref_id":"0033652"}}}


id: GO:0140642
data:
  {"annotated_genes":["SJAG_01613","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99011,101221],"is_not":false,"summary":null,"term":"GO:0140642"}]},"cv_name":"biological_process","definition":"The spindle organization process in which the spindle is maintained at a constant length during meiotic metaphase.","definition_xrefs":["PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle assembly","termid":"GO:0090306"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0140013","GO:0007049","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"meiotic spindle formation (spindle phase two)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140642","terms_by_termid":{"GO:0140642":null}}


id: GO:0032561
data:
  {"annotated_genes":["SJAG_01695","SJAG_02595","SJAG_02302","SJAG_03846","SJAG_03371","SJAG_04940","SJAG_04366","SJAG_04862","SJAG_02661","SJAG_01391","SJAG_03461","SJAG_02353","SJAG_00424","SJAG_04509","SJAG_02374","SJAG_00414","SJAG_02331","SJAG_02444","SJAG_02824","SJAG_04387","SJAG_00801","SJAG_00659","SJAG_01379","SJAG_03684","SJAG_00231","SJAG_01789","SJAG_01774","SJAG_01215","SJAG_05332","SJAG_02684","SJAG_03374","SJAG_03732","SJAG_00906","SJAG_02520","SJAG_00457","SJAG_02848","SJAG_03342","SJAG_00430","SJAG_00044","SJAG_01558","SJAG_00983","SJAG_03959","SJAG_03915","SJAG_00031","SJAG_02604","SJAG_01696","SJAG_04157","SJAG_00466","SJAG_00360","SJAG_01851","SJAG_02856","SJAG_00840","SJAG_01438","SJAG_01534","SJAG_02171","SJAG_04375","SJAG_02640","SJAG_01358","SJAG_01769","SJAG_02233","SJAG_00968","SJAG_04666","SJAG_03275","SJAG_01449","SJAG_04874","SJAG_00118","SJAG_03137","SJAG_01909","SJAG_04470","SJAG_00344","SJAG_02292","SJAG_03072","SJAG_01456","SJAG_02180","SJAG_04003","SJAG_01339","SJAG_01929","SJAG_04410","SJAG_04233","SJAG_04343","SJAG_02605","SJAG_00226","SJAG_01277","SJAG_02384","SJAG_02366","SJAG_02509","SJAG_00663","SJAG_02656","SJAG_05030","SJAG_03688","SJAG_04004","SJAG_04351","SJAG_02601","SJAG_03188","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74885,91457,71937,92187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019003"},{"annotations":[88633,115497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019002"},{"annotations":[74882,57800,63935,60144,57719,68555,68651,72901,74092,59360,75574,57787,64197,69532,66102,68945,77665,79733,58485,91685,66087,93213,95522,65215,72511,59777,79793,118288,101029,63440,57966,60637,67153,62316,69362,66406,72917,62644,57911,57273,113337,118767,64428,70715,78267,71934,96040,79814,76148,77650,62536,77296,59869,61538,64520,71191,68620,60147,64957,65668,67982,77463,103455,93991,96272,104859,73791,69826,117304,65634,67548,74077,90839,62805,62405,63381,56921,66816,71993,61999,93160,108274,76994,60899,58679,61115,61574,64001,67668,58617,72175,73171,80081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to a guanyl ribonucleotide, any compound consisting of guanosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl nucleotide binding","termid":"GO:0019001"},{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"}],"gene_count":95,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02374":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04410":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanyl ribonucleotide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0032561","terms_by_termid":{"GO:0005525":null,"GO:0019002":null,"GO:0019003":null}}


id: GO:0070975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a FHA domain of a protein. The FHA domain is a phosphopeptide recognition domain found in many regulatory proteins, and consists of approximately 80-100 amino acid residues folded into an 11-stranded beta sandwich.","definition_xrefs":["InterPro:IPR000253","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"FHA domain binding","synonyms":[{"name":"Forkhead-associated domain binding","type":"exact"}],"termid":"GO:0070975"}


id: MONDO:1011564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroaxonal dystrophy that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, non-human animal","termid":"MONDO:1011444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, rabbit","secondary_identifiers":["OMIA:000715-9986"],"termid":"MONDO:1011564","xrefs":{"Monarch":{"xref_id":"1011564"}}}


id: MONDO:0011702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of delta-sarcoglycan","termid":"MONDO:0016144"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1L","secondary_identifiers":["DOID:0110436","MESH:C564679","UMLS:C1847667","GARD:15397","MEDGEN:335735","OMIM:606685"],"synonyms":[{"name":"CMD1L","type":"exact"},{"name":"SGCD familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1L","type":"related"},{"name":"cardiomyopathy, dilated, type 1L","type":"exact"},{"name":"dilated cardiomyopathy type 1L","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in SGCD","type":"exact"}],"termid":"MONDO:0011702","xrefs":{"Monarch":{"xref_id":"0011702"}}}


id: FYPO:0002093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion","synonyms":[{"name":"decreased sister chromatid cohesion during meiosis","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0002093"}


id: MONDO:0031002
data:
  {"annotated_genes":["SJAG_04002"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85332],"is_not":false,"summary":null,"term":"MONDO:0031002"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04002":null},"genotype_count":0,"is_obsolete":false,"name":"Baralle-Macken syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1778777","OMIM:619255","UMLS:C5543241"],"synonyms":[{"name":"BARMACS","type":"exact"},{"name":"neurodevelopmental disorder with cataracts and variable microcephaly","type":"exact"}],"termid":"MONDO:0031002","terms_by_termid":{"MONDO:0031002":null},"xrefs":{"Monarch":{"xref_id":"0031002"}}}


id: PBO:0113062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore sub-complex COMA; COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) bridges kinetochore subunits in contact with centromeric DNA with subunits bound to microtubules during kinetochore assembly; involved in minichromosome maintenance; modified by sumoylation; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-O","termid":"PBO:0113062"}


id: PBO:0113041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone with two zinc fingers essential for eEF1A biogenesis; nuclear in growing cells, cytoplasmic in starved cells; shuttled via process mediated by Cpr1p; binds translation elongation factor eEF-1 (Tef1p); relative distribution to nucleus increases upon DNA replication stress; human ZPR1 gene can complement yeast by allowing growth during down-regulation of yeast zpr1","termid":"PBO:0113041"}


id: GO:0010507
data:
  {"annotated_genes":["SJAG_00457","SJAG_03371","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72180,76153],"is_not":false,"summary":null,"term":"GO:0010507"},{"annotations":[106450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"negatively_regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_02723":null,"SJAG_03371":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"negative regulation of autophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010507","terms_by_termid":{"GO:0010507":null,"GO:0016242":null}}


id: PBO:0067728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 26","termid":"PBO:0067728"}


id: PBO:0045941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B1","termid":"PBO:0045941"}


id: PBO:0087440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit g of the mitochondrial F1F0 ATP synthase; reversibly phosphorylated on two residues; unphosphorylated form is required for dimerization of the ATP synthase complex, which in turn determines oligomerization of the complex and the shape of inner membrane cristae","termid":"PBO:0087440"}


id: GO:1990427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at either end of a stereocilia tip link that provides the anchor in the stereocilia membrane.","definition_xrefs":["PMID:21709241","PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilia tip link","termid":"GO:0002140"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia tip-link density","termid":"GO:1990427"}


id: PBO:0070895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 3","termid":"PBO:0070895"}


id: MONDO:0014520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"46,XX ovarian dysgenesis-short stature syndrome","secondary_identifiers":["OMIM:616185","UMLS:C4015409","DOID:0080496","Orphanet:444048","MEDGEN:863846","GARD:17760"],"synonyms":[{"name":"ODG4","type":"related"},{"name":"ovarian dysgenesis 4","type":"related"},{"name":"ovarian dysgenesis type 4","type":"exact"}],"termid":"MONDO:0014520","xrefs":{"Monarch":{"xref_id":"0014520"}}}


id: GO:0016669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.8.2.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, cytochrome as acceptor","type":"exact"}],"termid":"GO:0016669"}


id: GO:0033075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["GOC:mah","PMID:26503307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoquinoline alkaloid biosynthetic process","synonyms":[{"name":"ipecac alkaloid biosynthesis","type":"related"},{"name":"isoquinoline alkaloid anabolism","type":"exact"},{"name":"isoquinoline alkaloid biosynthesis","type":"exact"},{"name":"isoquinoline alkaloid formation","type":"exact"},{"name":"isoquinoline alkaloid synthesis","type":"exact"}],"termid":"GO:0033075"}


id: FYPO:0002846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and small vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and small cells (obsolete FYPO:0002846)","termid":"FYPO:0002846"}


id: GO:0071305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin D","termid":"GO:0033280"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin D","synonyms":[{"name":"cellular response to calciferol","type":"exact"},{"name":"cellular response to cholecalciferol","type":"narrow"},{"name":"cellular response to ergocalciferol","type":"narrow"}],"termid":"GO:0071305"}


id: PBO:0011478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxyl reductase (NADPH-dependent) (predicted)","termid":"PBO:0011478"}


id: GO:1902250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:mtg_apoptosis","PMID:14569084","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte apoptotic process","synonyms":[{"name":"regulation of RBC apoptosis","type":"narrow"},{"name":"regulation of RBC apoptotic process","type":"exact"},{"name":"regulation of erythrocyte apoptosis","type":"narrow"},{"name":"regulation of red blood cell apoptosis","type":"narrow"},{"name":"regulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902250"}


id: MONDO:0013580
data:
  {"annotated_genes":["SJAG_03064"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85681],"is_not":false,"summary":null,"term":"MONDO:0013580"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase E1-beta deficiency is an extremely rare form of pyruvate dehydrogenase deficiency (PDHD) characterized by severe lactic acidosis, developmental delay and hypotonia.","definition_xrefs":["Orphanet:255138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0037792","MONDO:0005244"],"is_obsolete":false,"name":"pyruvate dehydrogenase E1-beta deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3279841","MEDGEN:481471","GARD:17236","MESH:C566729","OMIM:614111"],"synonyms":[{"name":"PDHBD","type":"exact"},{"name":"pyruvate dehydrogenase E1-BETA deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-beta deficiency","type":"exact"},{"name":"pyruvate dehydrogenase complex E1 component subunit beta deficiency","type":"exact"}],"termid":"MONDO:0013580","terms_by_termid":{"MONDO:0013580":null},"xrefs":{"Monarch":{"xref_id":"0013580"}}}


id: PBO:0041934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 2","termid":"PBO:0041934"}


id: PBO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 19","termid":"PBO:0052374"}


id: PBO:0042502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 22","termid":"PBO:0042502"}


id: SO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene located in kinetoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"kinetoplast","termid":"SO:0000741"},{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetoplast_gene","synonyms":[{"name":"kinetoplast gene","type":"exact"}],"termid":"SO:0000089"}


id: PBO:0087416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 6 of the ubiquinol cytochrome-c reductase complex; the complex, also known as the cytochrome bc(1) complex or Complex III, is a component of the mitochondrial inner membrane electron transport chain; highly acidic protein; required for maturation of cytochrome c1; may be loosely associated with the complex since it is easily released into the intermembrane space","termid":"PBO:0087416"}


id: MONDO:0018129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive cerebellar ataxia with late-onset spasticity is a rare, genetic neurodegenerative disease characterized by childhood or adolescent-onset of cerebellar ataxia with dysarthria which slowly progresses and associates pyramidal signs, including lower limb spasticity, brisk reflexes, and Babinski and Hoffman signs. Patients typically present cerebellar ataxia with development of increasing asymmetric spasticity in upper and lower limbs, and variable axonal sensory or sensorimotor neuropathy. Additional heterogeneous features, including pes cavus, scoliolis, and abnormalities of the brain (e.g. cerebral atrophy), may also be associated.","definition_xrefs":["Orphanet:352641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0006025","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"autosomal recessive cerebellar ataxia with late-onset spasticity","secondary_identifiers":["SCTID:763348005","GARD:21525","UMLS:C4706412","MEDGEN:1635411"],"synonyms":[{"name":"autosomal recessive cerebellar ataxia due to GBA2 deficiency","type":"exact"}],"termid":"MONDO:0018129","xrefs":{"Monarch":{"xref_id":"0018129"}}}


id: PBO:0045980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS homologous factor","termid":"PBO:0045980"}


id: SO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable element that is incorporated into a chromosome by a mechanism that requires reverse transcriptase.","direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon","secondary_identifiers":["http://en.wikipedia.org/wiki/Retrotransposon"],"synonyms":[{"name":"class I","type":"related"},{"name":"class I transposon","type":"exact"},{"name":"retrotransposon element","type":"exact"}],"termid":"SO:0000180"}


id: PR:P08092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ran1 gene.","definition_xrefs":["UniProtKB:P08092","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of sexual conjugation and meiosis (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.05","synonyms":[{"name":"Spom972h-ran1","type":"exact"}],"termid":"PR:P08092"}


id: FYPO:0003579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during one or both meiotic nuclear divisions is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during meiotic cell cycle","termid":"FYPO:0006976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during meiosis","synonyms":[{"name":"normal RNA accumulation during meiosis","type":"related"},{"name":"normal RNA level during meiotic nuclear division","type":"exact"},{"name":"normal cellular RNA level during meiosis","type":"exact"},{"name":"normal mRNA level during meiosis","type":"narrow"},{"name":"normal transcript level during meiosis","type":"exact"}],"termid":"FYPO:0003579"}


id: GO:0010180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thioglucosidase enzyme.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thioglucosidase binding","synonyms":[{"name":"myrosinase binding","type":"exact"}],"termid":"GO:0010180"}


id: PBO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_inhibitor_of","termid":"PBO:0000013"}


id: GO:0010713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"negatively_regulates","term_name":"collagen metabolic process","termid":"GO:0032963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen metabolic process","termid":"GO:0010713"}


id: MONDO:1011655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polled and multisystemic syndrome, non-human animal","secondary_identifiers":["OMIA:001736"],"termid":"MONDO:1011655","xrefs":{"Monarch":{"xref_id":"1011655"}}}


id: GO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of excretion, the elimination by an organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of excretion","termid":"GO:0044062"}


id: GO:0072306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the metanephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072041"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:0072304"},{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900213"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","synonyms":[{"name":"positive regulation of mesenchymal stem cell apoptosis involved in metanephric nephron morphogenesis","type":"narrow"},{"name":"positive regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis","type":"exact"}],"termid":"GO:0072306"}


id: PATO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being curled or wound (especially in concentric rings or spirals).","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coiling","termid":"PATO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled","secondary_identifiers":["PATO:0001363"],"synonyms":[{"name":"helical","type":"related"},{"name":"helicoid","type":"related"},{"name":"helicoidal","type":"related"},{"name":"helix-shaped","type":"related"},{"name":"spiral","type":"exact"}],"termid":"PATO:0000404"}


id: MONDO:0035466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nephrotic syndrome without extrarenal manifestations (obsolete MONDO:0035466)","secondary_identifiers":["Orphanet:567564"],"termid":"MONDO:0035466","xrefs":{"Monarch":{"xref_id":"0035466"}}}


id: MONDO:0010223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"recessive X-linked ichthyosis","termid":"MONDO:0010622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"ichthyosis, X-linked, without steroid sulfatase deficiency","secondary_identifiers":["GARD:15250","MEDGEN:341213","MESH:C564729","OMIM:300001","UMLS:C1848387"],"synonyms":[{"name":"ichthyosis, X-linked, without steroid sulfatase deficiency","type":"exact"}],"termid":"MONDO:0010223","xrefs":{"Monarch":{"xref_id":"0010223"}}}


id: MONDO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal accumulation of cerebrospinal fluid within the ventricles of the brain that occurs as a consequence of impaired cerebrospinal fluid reabsorption by the arachnoid granulations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"communicating hydrocephalus","secondary_identifiers":["ICD9:331.3","ICD10CM:G91.0","MEDGEN:1058","UMLS:C0009451","SCTID:271569006","NCIT:C34501","icd11.foundation:186577228","DOID:1573"],"synonyms":[{"name":"non-obstructive hydrocephalus","type":"exact"}],"termid":"MONDO:0002045","xrefs":{"Monarch":{"xref_id":"0002045"}}}


id: GO:0042105
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein.","definition_xrefs":["GOC:mah","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell receptor complex","termid":"GO:0042101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha-beta T cell receptor complex","synonyms":[{"name":"alpha-beta T lymphocyte receptor complex","type":"exact"},{"name":"alpha-beta T-cell receptor complex","type":"exact"},{"name":"alpha-beta T-lymphocyte receptor complex","type":"exact"},{"name":"alpha-beta TCR complex","type":"exact"}],"termid":"GO:0042105"}


id: GO:0001905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of the membrane attack complex components of the complement cascade which can result in death of a target cell through cytolysis.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of membrane attack complex","synonyms":[{"name":"MAC assembly","type":"exact"},{"name":"MAC formation","type":"exact"},{"name":"activation of MAC","type":"exact"},{"name":"activation of TCC","type":"narrow"},{"name":"activation of terminal complement complex","type":"narrow"},{"name":"activation of the terminal complement cascade","type":"narrow"},{"name":"membrane attack complex assembly","type":"exact"},{"name":"membrane attack complex formation","type":"exact"}],"termid":"GO:0001905"}


id: MONDO:0022648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A specific change in the MTTK gene causes a condition characterized by weakened heart muscle (cardiomyopathy) and hearing loss. Affected individuals may also have myopathy and ataxia. This mutation replaces the DNA building block (nucleotide) guanine with the nucleotide adenine at position 8363 (written as G8363A) within the gene. It is unclear how this alteration in the MTTK gene results in cardiomyopathy, hearing loss, and other symptoms.","definition_xrefs":["GARD:0001108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and deafness due to tRNA lysine gene mutation","secondary_identifiers":["GTR:AN0103739","GTR:AN0103738","HGNC:7489"],"synonyms":[{"name":"cardiomyopathy and deafness due to MTTK gene mutation","type":"related"},{"name":"cardiomyopathy and deafness due to tRNA lysine gene mutation","type":"exact"}],"termid":"MONDO:0022648","xrefs":{"Monarch":{"xref_id":"0022648"}}}


id: MONDO:0018920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripartum cardiomyopathy (PPCM) is an idiopathic, potentially fatal form of dilated cardiomyopathy that develops during the final month of pregnancy or within five months after delivery.","definition_xrefs":["Orphanet:563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial dilated cardiomyopathy","termid":"MONDO:0016338"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"peripartum cardiomyopathy","secondary_identifiers":["icd11.foundation:1218807936","GARD:220","EFO:0002628","DOID:9997","ICD10CM:O90.3","ICD9:674.5","NCIT:C171602","MEDGEN:163756","ICD9:674.54","SCTID:62377009","UMLS:C0877208","MedDRA:10049430"],"synonyms":[{"name":"Meadows' syndrome","type":"related"},{"name":"antepartum peripartum cardiomyopathy","type":"exact"},{"name":"peripartum cardiomyopathy","type":"exact"},{"name":"postpartum cardiomyopathy","type":"exact"},{"name":"postpartum peripartum cardiomyopathy","type":"exact"}],"termid":"MONDO:0018920","xrefs":{"Monarch":{"xref_id":"0018920"}}}


id: PBO:0063109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARL pseudogene 2","termid":"PBO:0063109"}


id: GO:1904478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal absorption.","definition_xrefs":["PMID:12469120","GOC:rl","GO_REF:0000058","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal absorption","termid":"GO:1904478"}


id: MONDO:0008248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pigmented purpuric eruption","secondary_identifiers":["MESH:C537186","MEDGEN:96058","OMIM:172900","UMLS:C0406515","SCTID:20343006"],"synonyms":[{"name":"Schamberg disease","type":"related"},{"name":"Schamberg purpura","type":"related"},{"name":"familial pigmented purpuric eruption","type":"related"},{"name":"pigmented purpura","type":"related"},{"name":"pigmented purpuric dermatosis","type":"related"},{"name":"pigmented purpuric eruption","type":"exact"},{"name":"progressive pigmented purpura","type":"related"}],"termid":"MONDO:0008248","xrefs":{"Monarch":{"xref_id":"0008248"}}}


id: MONDO:0003864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An indolent, mature B-cell neoplasm composed of small, round B-lymphocytes. When the bone marrow and peripheral blood are involved, the term chronic lymphocytic leukemia is used. The term small lymphocytic lymphoma is restricted to cases which do not show leukemic involvement of the bone marrow and peripheral blood.","definition_xrefs":["NCIT:C27911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell chronic lymphocytic leukemia","termid":"MONDO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma","secondary_identifiers":["UMLS:C1302547","DOID:6354","MEDGEN:224906","ICDO:9823/3","ONCOTREE:CLLSLL"],"synonyms":[{"name":"CLL/SLL","type":"exact"},{"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma","type":"exact"},{"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003864","xrefs":{"Monarch":{"xref_id":"0003864"}}}


id: PBO:0114605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic adaptor, ENTH/VHS domain Yap18","termid":"PBO:0114605"}


id: MONDO:0041656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very serious type of heart attack during which one of the heart’s major arteries (one of the arteries that supplies oxygen and nutrient-rich blood to the heart muscle) is blocked. ST-segment elevation is an abnormality detected on the 12-lead ECG.","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocardial infarction","termid":"MONDO:0004781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ST-elevation myocardial infarction","secondary_identifiers":["MESH:D000072657","SCTID:401303003"],"synonyms":[{"name":"ST segment elevation myocardial infarction","type":"exact"},{"name":"STEMI","type":"exact"},{"name":"acute-ST segment elevation myocardial infarction","type":"exact"}],"termid":"MONDO:0041656","xrefs":{"Monarch":{"xref_id":"0041656"}}}


id: PBO:0067159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 211, pseudogene","termid":"PBO:0067159"}


id: PBO:0067643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 817, pseudogene","termid":"PBO:0067643"}


id: PR:Q9UU96
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grc3 gene.","definition_xrefs":["UniProtKB:Q9UU96","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide 5'-hydroxyl-kinase grc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.03","synonyms":[{"name":"Spom972h-grc3","type":"exact"}],"termid":"PR:Q9UU96"}


id: GO:0047980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzoylglycine + H2O = benzoate + glycine.","definition_xrefs":["EC:3.5.1.32","RHEA:10424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"hippurate hydrolase activity","secondary_identifiers":["MetaCyc:HIPPURATE-HYDROLASE-RXN","KEGG_REACTION:R01424"],"synonyms":[{"name":"N-benzoylamino-acid amidohydrolase activity","type":"related"},{"name":"benzoylglycine amidohydrolase activity","type":"related"},{"name":"hippuricase activity","type":"related"}],"termid":"GO:0047980"}


id: MONDO:0300000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital disorder of glycosylation with a SSR3 deficiency that affects the brain, lungs and gastrointestinal system, and presents with clinical phenotypes such as seizures, intellectual disability, developmental delay, microcephaly and abnormal brain structure.","definition_xrefs":["PMID:27010055","PMID:28484880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"SSR3-CDG","synonyms":[{"name":"SSR3 congenital disorder of glycosylation","type":"exact"},{"name":"SSR3 deficiency","type":"exact"}],"termid":"MONDO:0300000","xrefs":{"Monarch":{"xref_id":"0300000"}}}


id: MONDO:0014570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ADCY6 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 8","secondary_identifiers":["MEDGEN:896058","GARD:18565","UMLS:C4225385","OMIM:616287"],"synonyms":[{"name":"ADCY6 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS8","type":"related"},{"name":"lethal congenital contracture syndrome 8","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ADCY6","type":"exact"},{"name":"lethal congenital contracture syndrome type 8","type":"exact"}],"termid":"MONDO:0014570","xrefs":{"Monarch":{"xref_id":"0014570"}}}


id: PBO:0083878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferredoxin of the mitochondrial matrix; required for formation of cellular iron-sulfur proteins; involved in heme A biosynthesis; human homolog FDX1L can complement yeast by allowing growth during down-regulation of yeast YAH1","termid":"PBO:0083878"}


id: GO:0007475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The coming together of the dorsal and ventral surfaces of the imaginal disc-derived wing during the conversion of a folded single layered wing disc to a flat bilayered wing.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing margin morphogenesis","termid":"GO:0008587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apposition of dorsal and ventral imaginal disc-derived wing surfaces","synonyms":[{"name":"apposition of dorsal and ventral wing surfaces","type":"exact"}],"termid":"GO:0007475"}


id: PBO:0047042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member C","termid":"PBO:0047042"}


id: MOD:01481
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 6'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6'-fluoro-L-tryptophan","synonyms":[{"name":"6-fluorotryptophan","type":"exact"}],"termid":"MOD:01481"}


id: GO:1990489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, in the absence of oxygen.","definition_xrefs":["PMID:23079077","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"anaerobic pectin catabolic process","synonyms":[{"name":"anaerobic pectin degradation","type":"exact"}],"termid":"GO:1990489"}


id: GO:1905525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter in response to iron that results in regulation of ferrichrome biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:20435771","GO_REF:0000063"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ferrichrome biosynthetic process by negative regulation of transcription from RNA polymerase II promoter in response to iron (obsolete GO:1905525)","synonyms":[{"name":"regulation of ferrichrome anabolism by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome anabolism by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome anabolism by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from Pol II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome formation by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome formation by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"}],"termid":"GO:1905525"}


id: PBO:0030748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell","termid":"PBO:0030748"}


id: PBO:0044486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 27 subfamily B member 1","termid":"PBO:0044486"}


id: PBO:0029475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029475"}


id: MONDO:0023052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectrodactyly polydactyly (obsolete MONDO:0023052)","termid":"MONDO:0023052","xrefs":{"Monarch":{"xref_id":"0023052"}}}


id: PBO:0062103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 1 pseudogene","termid":"PBO:0062103"}


id: MONDO:0018942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired skeletal muscle disease","termid":"MONDO:0016105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophagic myofasciitis","secondary_identifiers":["GARD:176","MESH:C537829","UMLS:C2931639","MEDGEN:419858","Orphanet:592","SCTID:718175009"],"synonyms":[{"name":"MMF","type":"exact"},{"name":"Macrophagic myofasciitis, childhood","type":"related"}],"termid":"MONDO:0018942","xrefs":{"Monarch":{"xref_id":"0018942"}}}


id: MONDO:0025130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An enterovirus infection of swine clinically indistinguishable from foot-and-mouth disease, vesicular stomatitis, and vesicular exanthema of swine. It is caused by a strain of human enterovirus B.","definition_xrefs":["MESH:D013555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"enterovirus infectious disease, non-human animal","termid":"MONDO:0700210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swine vesicular disease","synonyms":[{"name":"swine vesicular diseases","type":"related"},{"name":"vesicular disease, swine","type":"related"},{"name":"vesicular diseases, swine","type":"related"}],"termid":"MONDO:0025130","xrefs":{"Monarch":{"xref_id":"0025130"}}}


id: GO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immature B cells from the bone marrow acquire the specialized features of T1 stage B cells in the spleen. T1 stage B cells do not express either CD23 or CD21.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitional stage B cell differentiation","termid":"GO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transitional one stage B cell differentiation","synonyms":[{"name":"T1 stage B cell differentiation","type":"exact"},{"name":"transitional one stage B cell development","type":"related"},{"name":"transitional one stage B lymphocyte differentiation","type":"exact"},{"name":"transitional one stage B-cell differentiation","type":"exact"},{"name":"transitional one stage B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002333"}


id: PBO:0038897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor A3","termid":"PBO:0038897"}


id: PBO:0055255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2682","termid":"PBO:0055255"}


id: PBO:0065819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5A, member RAS oncogene family","termid":"PBO:0065819"}


id: GO:0001664
data:
  {"annotated_genes":["SJAG_02444","SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74010,80084],"is_not":false,"summary":null,"term":"GO:0001664"}]},"cv_name":"molecular_function","definition":"Binding to a G protein-coupled receptor.","definition_xrefs":["GOC:ceb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"G protein-coupled receptor binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-500717"],"synonyms":[{"name":"G protein coupled receptor binding","type":"exact"},{"name":"G protein coupled receptor ligand","type":"narrow"},{"name":"G-protein coupled receptor binding","type":"exact"},{"name":"G-protein-coupled receptor ligand","type":"narrow"}],"termid":"GO:0001664","terms_by_termid":{"GO:0001664":null}}


id: GO:1903509
data:
  {"annotated_genes":["SJAG_02913","SJAG_05278","SJAG_04924","SJAG_03878","SJAG_01416","SJAG_05327","SJAG_00068","SJAG_03115","SJAG_02168","SJAG_04165","SJAG_01227","SJAG_04119","SJAG_04881","SJAG_04878","SJAG_00831","SJAG_03801","SJAG_03506","SJAG_00295","SJAG_01570","SJAG_05311","SJAG_02523","SJAG_06383","SJAG_02804","SJAG_03672","SJAG_03953","SJAG_02488","SJAG_03066","SJAG_00506","SJAG_00846","SJAG_04913","SJAG_01860","SJAG_02776","SJAG_06425","SJAG_03292","SJAG_04975","SJAG_04337"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72434,77989,89300,62851,76211,77612,74530,76802,63192,92753,103498,58151,77255,57640,103560,62276,71482,57993,75309,77252,60206,72806,58040,77522,72994,69453,87182,75286,76108,77245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[73442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[95012,112334,78991,75258,91563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving liposaccharide.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:9452964","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"liposaccharide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"liposaccharide metabolism","type":"exact"}],"termid":"GO:1903509","terms_by_termid":{"GO:0006506":null,"GO:0006676":null,"GO:0051999":null}}


id: GO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization of a calyciferous axon which forms large synapses in the mammalian auditory central nervous system.","definition_xrefs":["NIF_Subcellular:sao1684283879","PMID:11823805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"calyx of Held","termid":"GO:0044305"}


id: PBO:0069408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 668, pseudogene","termid":"PBO:0069408"}


id: FYPO:0000665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a peptidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal peptidase activity","synonyms":[{"name":"normal protease activity","type":"exact"}],"termid":"FYPO:0000665"}


id: PBO:0039039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL1 antisense RNA 1","termid":"PBO:0039039"}


id: GO:0098651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any collagen timer that is part of a basement membrane.","definition_xrefs":["GOC:dos","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"basement membrane collagen trimer","termid":"GO:0098651"}


id: GO:0021925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to Purkinje cells. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem.","definition_xrefs":["GOC:dph","GOC:jid","PMID:15157725","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell precursor proliferation","termid":"GO:0021925"}


id: PBO:0085098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear pore-associated protein; component of TREX-2 complex (Sac3p-Thp1p-Sus1p-Cdc31p) involved in transcription elongation and mRNA export from the nucleus; involved in post-transcriptional tethering of active genes to the nuclear periphery and to non-nascent mRNP; contains a PAM domain implicated in protein-protein binding","termid":"PBO:0085098"}


id: GO:0009305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of biotin (vitamin B7 / vitamin H) to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein biotinylation (obsolete GO:0009305)","synonyms":[{"name":"protein amino acid biotinylation","type":"exact"}],"termid":"GO:0009305"}


id: PBO:0001693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin Grx5","termid":"PBO:0001693"}


id: PBO:0031806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_at_mitotic_metaphase/anaphase_transition","termid":"PBO:0031806"}


id: GO:0103003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oleate + a lipid hydroperoxide = 9,10-epoxystearate + a lipid alcohol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oleate peroxygenase activity (obsolete GO:0103003)","termid":"GO:0103003"}


id: PBO:0050580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 4","termid":"PBO:0050580"}


id: GO:0009431
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the rings of the bacterial-type flagellar basal body; a double-flanged ring that anchors the basal body to the cytoplasmic membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:cilia","PMID:12624192","PMID:10572114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, MS ring","secondary_identifiers":["GO:0009430"],"synonyms":[{"name":"flagellar basal body, MS ring","type":"exact"},{"name":"flagellar basal body, mounting plate","type":"broad"},{"name":"flagellin-based flagellum basal body, MS ring","type":"exact"}],"termid":"GO:0009431"}


id: PBO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-homologous end joining factor 1","termid":"PBO:0060989"}


id: MONDO:0010791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of metabolism characterized by abnormal urinary excretion of myoglobin due to acute destruction of skeletal muscle fibers. The exact prevalence remains unknown. In the majority of cases, the disease manifests in childhood and is often triggered by exertion or infection (febrile illness). Hypertonia, muscle stiffness and muscle pain, impaired kidney function and elevated levels of serum creatine kinase are common clinical features. Mutations in the mitochondrial DNA-encoded cytochrome C oxidase genes (MT-CO1 and MT-CO2) should be considered in patients with recurrent myoglobinuria. Recently, mutations in the LPIN1 gene (chromosome 2p21) have been reported to have a causative role in three patients with recurrent episodes of myoglobinuria, originating from consanguineous families. The disorder may occur sporadically, or be inherited in either a recessive or dominant manner.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary recurrent myoglobinuria","termid":"MONDO:0020504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"myoglobinuria, recurrent","secondary_identifiers":["MEDGEN:333201","MESH:C564018","OMIM:550500","GARD:3879","UMLS:C1838877"],"synonyms":[{"name":"myoglobinuria recurrent","type":"related"},{"name":"myoglobinuria, recurrent","type":"exact"}],"termid":"MONDO:0010791","xrefs":{"Monarch":{"xref_id":"0010791"}}}


id: MONDO:0023662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 10","secondary_identifiers":["OMIM:619369","UMLS:C5543531","MEDGEN:1780452"],"synonyms":[{"name":"LMPHM10","type":"exact"}],"termid":"MONDO:0023662","xrefs":{"Monarch":{"xref_id":"0023662"}}}


id: SO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region where transcription factor binding sites are clustered to regulate various aspects of transcription activities. (CRMs can be located a few kb to hundreds of kb upstream of the core promoter, in the coding sequence, within introns, or in the untranslated regions (UTR) sequences, and even on a different chromosome). A single gene can be regulated by multiple CRMs to give precise control of its spatial and temporal expression. CRMs function as nodes in large, intertwined regulatory network. CRM DNA accessibility is subject to regulation by dbTFs and transcription co-TFs.","definition_xrefs":["PMID:19660565","SO:SG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_regulatory_module","synonyms":[{"name":"CRM","type":"exact"},{"name":"TF module","type":"exact"},{"name":"cis regulatory module","type":"exact"},{"name":"transcription factor module","type":"exact"}],"termid":"SO:0000727"}


id: PBO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA","termid":"PBO:0002184"}


id: MONDO:0004366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed glioma characterized by the presence of astrocytic, ependymal, and oligodendroglial neoplastic components.","definition_xrefs":["NCIT:C8272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed glioma","termid":"MONDO:0003268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed astrocytoma-ependymoma-oligodendroglioma","secondary_identifiers":["MEDGEN:79184","UMLS:C0280792","DOID:7817"],"synonyms":[{"name":"mixed astrocytoma-ependymoma-oligodendroglioma","type":"exact"}],"termid":"MONDO:0004366","xrefs":{"Monarch":{"xref_id":"0004366"}}}


id: PBO:0055779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and ring finger 1","termid":"PBO:0055779"}


id: GO:1905488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["PMID:16516839","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"is_a","term_name":"regulation of anterior/posterior axon guidance","termid":"GO:1905486"},{"relation_name":"positively_regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior/posterior axon guidance","synonyms":[{"name":"activation of anterior-posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon pathfinding","type":"narrow"},{"name":"positive regulation of anterior-posterior axon guidance","type":"exact"},{"name":"positive regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up-regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"upregulation of anterior-posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905488"}


id: GO:0180005
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111765],"is_not":false,"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-threonine (consensus YSPTSPS)(position 4) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016787","GO:0016788","GO:0004721","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain T4 phosphatase activity","type":"exact"}],"termid":"GO:0180005","terms_by_termid":{"GO:0180005":null}}


id: GO:0071719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene transport","termid":"GO:0071716"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sodium-independent leukotriene transport","termid":"GO:0071719"}


id: PBO:0069835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1121, pseudogene","termid":"PBO:0069835"}


id: PR:Q9P4W1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P4W1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase polypeptide VIII, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.16c","synonyms":[{"name":"Spom972h-cox8","type":"exact"}],"termid":"PR:Q9P4W1"}


id: PR:Q9P7M1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dep1 gene.","definition_xrefs":["UniProtKB:Q9P7M1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein dep1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.02c","synonyms":[{"name":"Spom972h-dep1","type":"exact"}],"termid":"PR:Q9P7M1"}


id: MONDO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rett syndrome (obsolete MONDO:0001425)","termid":"MONDO:0001425","xrefs":{"Monarch":{"xref_id":"0001425"}}}


id: PBO:0068816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 54, pseudogene","termid":"PBO:0068816"}


id: PBO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression repressed by glucose","termid":"PBO:0000390"}


id: GO:0040028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:kmv","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vulval development","termid":"GO:0040028"}


id: PBO:0083023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome III but later withdrawn","termid":"PBO:0083023"}


id: PR:Q09737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc202 gene.","definition_xrefs":["UniProtKB:Q09737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase C13A11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.06","synonyms":[{"name":"Spom972h-pdc202","type":"exact"}],"termid":"PR:Q09737"}


id: GO:0032898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a neurotrophin due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels. A neurotrophin is any of a family of growth factors that prevent apoptosis in neurons and promote nerve growth.","definition_xrefs":["GOC:mtg_MIT_16mar07","GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurotrophin production","termid":"GO:0032898"}


id: MONDO:0004098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of malignant peripheral nerve sheath tumor that arises from the mediastinum. It is characterized by the presence of malignant cells that contain melanin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"},{"relation_name":"is_a","term_name":"malignant melanocytic neoplasm of the peripheral nerve sheath","termid":"MONDO:0003863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant melanocytic peripheral nerve sheath tumor of mediastinum","secondary_identifiers":["DOID:7077","MEDGEN:233154","NCIT:C6630","UMLS:C1334600"],"synonyms":[{"name":"malignant mediastinal melanocytic peripheral nerve sheath tumor","type":"exact"},{"name":"malignant mediastinal melanocytic peripheral nerve sheath tumour","type":"exact"},{"name":"malignant melanocytic neoplasm of the peripheral nerve sheath of mediastinum","type":"exact"},{"name":"malignant melanocytic peripheral nerve sheath tumor of mediastinum","type":"exact"},{"name":"malignant melanotic peripheral nerve sheath tumor of the mediastinum","type":"exact"},{"name":"malignant melanotic peripheral nerve sheath tumour of the mediastinum","type":"exact"},{"name":"mediastinal melanocytic MPNST","type":"exact"},{"name":"mediastinum malignant melanocytic neoplasm of the peripheral nerve sheath","type":"exact"}],"termid":"MONDO:0004098","xrefs":{"Monarch":{"xref_id":"0004098"}}}


id: MONDO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meniere disease","termid":"MONDO:0007972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active cochlear Meniere disease","secondary_identifiers":["ICD9:386.02","UMLS:C0155497","MEDGEN:509990","DOID:13492","SCTID:194349005"],"synonyms":[{"name":"active Meniere's disease, cochlear","type":"exact"},{"name":"active cochlear Meniere disease","type":"exact"},{"name":"active cochlear Meniere's disease","type":"exact"},{"name":"cochlear active Mnire's disease","type":"exact"}],"termid":"MONDO:0001729","xrefs":{"Monarch":{"xref_id":"0001729"}}}


id: MONDO:0001223
data:
  {"annotated_genes":["SJAG_01151","SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[85423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"},{"annotations":[84766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"A disease involving the parathyroid gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01151":null,"SJAG_04978":null},"genotype_count":0,"is_obsolete":false,"name":"parathyroid gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0005754","MESH:D010279","ICD9:252.9","MEDGEN:893009","ICD9:252.8","NCIT:C26844","UMLS:C4025822","DOID:11201","SCTID:73132005","ICD9:252"],"synonyms":[{"name":"disease of parathyroid gland","type":"exact"},{"name":"disease of parathyroid glands","type":"exact"},{"name":"disease or disorder of parathyroid gland","type":"exact"},{"name":"disorder of parathyroid gland","type":"exact"},{"name":"parathyroid disease","type":"exact"},{"name":"parathyroid gland disease","type":"exact"},{"name":"parathyroid gland disease or disorder","type":"exact"},{"name":"parathyroid gland diseases","type":"exact"},{"name":"parathyroid gland disorder","type":"exact"},{"name":"parathyroid gland disorders","type":"exact"}],"termid":"MONDO:0001223","terms_by_termid":{"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0011301":null,"MONDO:0012004":null},"xrefs":{"Monarch":{"xref_id":"0001223"}}}


id: PBO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia","termid":"PBO:0005179"}


id: GO:0098604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Se-Adenosyl-L-selenohomocysteine + H2O => Adenosine + Selenohomocysteine.","definition_xrefs":["GOC:dos","PMID:1711890","PMID:7305945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trialkylsulfonium hydrolase activity","termid":"GO:0016802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"adenosylselenohomocysteinase activity","secondary_identifiers":["Reactome:R-HSA-2408532"],"termid":"GO:0098604"}


id: GO:0008202
data:
  {"annotated_genes":["SJAG_03249","SJAG_01307","SJAG_04270","SJAG_03235","SJAG_02982","SJAG_03024","SJAG_02719","SJAG_00370","SJAG_03598","SJAG_02104","SJAG_02291","SJAG_00261","SJAG_02068","SJAG_02855","SJAG_03509","SJAG_04810","SJAG_04059","SJAG_03531","SJAG_03929","SJAG_04018","SJAG_03018","SJAG_04049","SJAG_02044","SJAG_00413","SJAG_03750","SJAG_00717","SJAG_04790","SJAG_00624","SJAG_01474","SJAG_04499","SJAG_03715","SJAG_01326","SJAG_00453","SJAG_04124","SJAG_00770","SJAG_00158","SJAG_04217"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62167,101598,117351],"is_not":false,"summary":null,"term":"GO:0008202"},{"annotations":[76864,76042,79913,69497,79997,94394,65494,72818,88220,73663,109046,75945,80132,73945,109882,116352,115041,71233,75866,107644,89406,107330,71410,70476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[114882,103785,75962,79961,103144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[93640],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[109652],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[75289],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[88310,105641],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"},{"annotations":[71668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016125"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00261":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01326":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02291":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04124":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"steroid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8957322","Wikipedia:Steroid_metabolism"],"synonyms":[{"name":"steroid metabolism","type":"exact"}],"termid":"GO:0008202","terms_by_termid":{"GO:0006696":null,"GO:0008202":null,"GO:0008204":null,"GO:0010895":null,"GO:0016125":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: SO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Description of sequence variants produced by alternative splicing, alternative promoter usage, alternative initiation and ribosomal frameshifting.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_variation_site","termid":"SO:0001146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"alternate_sequence_site","secondary_identifiers":["BS:00073","SO:0001065"],"synonyms":[{"name":"alternative_sequence","type":"exact"},{"name":"isoform","type":"narrow"},{"name":"sequence variation","type":"narrow"},{"name":"var_seq","type":"exact"},{"name":"varsplic","type":"narrow"}],"termid":"SO:0001149"}


id: PBO:0031038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Golgi_organization","termid":"PBO:0031038"}


id: PBO:0087145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding subunit of the mRNA cleavage and polyadenylation factor; involved in poly(A) site recognition and required for both pre-mRNA cleavage and polyadenylation, 51% sequence similarity with mammalian AAUAA-binding subunit of CPSF","termid":"PBO:0087145"}


id: PBO:0074911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 82","termid":"PBO:0074911"}


id: GO:0010890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid storage","termid":"GO:0010884"},{"relation_name":"is_a","term_name":"regulation of triglyceride storage","termid":"GO:0010889"},{"relation_name":"positively_regulates","term_name":"triglyceride storage","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of triglyceride storage","synonyms":[{"name":"positive regulation of sequestering of triacylglycerol","type":"exact"},{"name":"positive regulation of sequestering of triglyceride","type":"exact"},{"name":"positive regulation of triglyceride sequestration","type":"exact"}],"termid":"GO:0010890"}


id: FYPO:0003461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular trehalose level","termid":"FYPO:0001449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular trehalose level during cellular response to salt stress","synonyms":[{"name":"normal cellular trehalose accumulation during cellular response to salt stress","type":"related"},{"name":"normal cellular trehalose level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0003461"}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: PBO:0091392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, LTR proximal","termid":"PBO:0091392"}


id: GO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with macrophage colony-stimulating factor (M-CSF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0140096","GO:0004672","GO:0003824","GO:0016740","GO:0038023","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor activity","synonyms":[{"name":"CSF-1","type":"narrow"},{"name":"Fms","type":"narrow"},{"name":"M-CSF receptor activity","type":"exact"},{"name":"macrophage colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0005011"}


id: PBO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberin, GTPase activator Tsc2","termid":"PBO:0036236"}


id: MONDO:1011611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, cattle","secondary_identifiers":["OMIA:001056-9913"],"termid":"MONDO:1011611","xrefs":{"Monarch":{"xref_id":"1011611"}}}


id: PBO:0086027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YBR259W is not an essential gene; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0086027"}


id: MONDO:0033653
data:
  {"annotated_genes":["SJAG_01190"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85503],"is_not":false,"summary":null,"term":"MONDO:0033653"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1752734","OMIM:619062","DOID:0070503","GARD:16415","UMLS:C5436720"],"synonyms":[{"name":"MC4DN18","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 18","type":"exact"}],"termid":"MONDO:0033653","terms_by_termid":{"MONDO:0033653":null},"xrefs":{"Monarch":{"xref_id":"0033653"}}}


id: PBO:0046433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 3","termid":"PBO:0046433"}


id: MONDO:0018420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 68","secondary_identifiers":["Orphanet:401825"],"synonyms":[{"name":"SPG68","type":"exact"}],"termid":"MONDO:0018420","xrefs":{"Monarch":{"xref_id":"0018420"}}}


id: GO:0022602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the sexual cycle seen in females, often with physiologic changes in the endometrium that recur at regular intervals during the reproductive years.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"},{"relation_name":"part_of","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation cycle process","synonyms":[{"name":"estrous cycle process","type":"related"},{"name":"menstrual cycle process","type":"related"}],"termid":"GO:0022602"}


id: PBO:0012311
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homotrimeric","termid":"PBO:0012311"}


id: GO:0035474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The segregation of angioblasts into discrete arterial and venous vessels from one common precursor vessel.","definition_xrefs":["PMID:19815777","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selective angioblast sprouting","termid":"GO:0035474"}


id: SO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer bound by a factor.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"bound_by_factor","termid":"SO:0000277"},{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_bound_by_factor","synonyms":[{"name":"enhancer bound by factor","type":"exact"}],"termid":"SO:0000166"}


id: PBO:0087036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L17B; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17B has a paralog, RPL17A, that arose from the whole genome duplication","termid":"PBO:0087036"}


id: MONDO:0004976
data:
  {"annotated_genes":["SJAG_04178","SJAG_04387","SJAG_00053","SJAG_02509","SJAG_01317","SJAG_03598","SJAG_03170","SJAG_02289","SJAG_02695","SJAG_07000","SJAG_02242","SJAG_03923","SJAG_03345","SJAG_00668","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[84998,87029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[86531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[86642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[85406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[85153,85152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[86267,86266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[86393,86394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[86498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[85079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[87019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","definition":"Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease characterized by progressive muscular paralysis reflecting degeneration of motor neurons in the primary motor cortex, corticospinal tracts, brainstem and spinal cord.","definition_xrefs":["Orphanet:803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior horn disorder","termid":"MONDO:0003182"},{"relation_name":"is_a","term_name":"motor neuron disorder","termid":"MONDO:0020128"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00668":null,"SJAG_01317":null,"SJAG_02242":null,"SJAG_02289":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03598":null,"SJAG_03923":null,"SJAG_04178":null,"SJAG_04387":null,"SJAG_04489":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:274","MESH:D000690","GARD:5786","NANDO:1200002","NIFSTD:birnlex_12566","UMLS:C0002736","DOID:332","MedDRA:10002026","NCIT:C34373","NORD:768","ICD10CM:G12.21","SCTID:86044005","ICD9:335.20","icd11.foundation:1982355687"],"synonyms":[{"name":"ALS","type":"exact"},{"name":"Charcot disease","type":"exact"},{"name":"Lou Gehrig disease","type":"exact"},{"name":"Lou Gehrig's disease","type":"exact"},{"name":"amyotrophic lateral sclerosis","type":"exact"},{"name":"motor neuron disease, bulbar","type":"exact"}],"termid":"MONDO:0004976","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008458":null,"MONDO:0010459":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0012077":null,"MONDO:0012945":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0014531":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0004976"}}}


id: MONDO:1010060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pheochromocytoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma, non-human animal","secondary_identifiers":["OMIA:001268"],"termid":"MONDO:1010060","xrefs":{"Monarch":{"xref_id":"1010060"}}}


id: GO:1901829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of zeaxanthin bis(beta-D-glucoside).","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:20075616","UniPathway:UPA00798","MetaCyc:PWY-6288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"beta-glucoside catabolic process","termid":"GO:1901805"},{"relation_name":"is_a","term_name":"zeaxanthin bis(beta-D-glucoside) metabolic process","termid":"GO:1901828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"zeaxanthin bis(beta-D-glucoside) catabolic process","synonyms":[{"name":"zeaxanthin bis(beta-D-glucoside) breakdown","type":"exact"},{"name":"zeaxanthin bis(beta-D-glucoside) catabolism","type":"exact"},{"name":"zeaxanthin bis(beta-D-glucoside) degradation","type":"exact"},{"name":"zeaxanthin diglucoside breakdown","type":"exact"},{"name":"zeaxanthin diglucoside catabolism","type":"exact"},{"name":"zeaxanthin diglucoside degradation","type":"exact"}],"termid":"GO:1901829"}


id: GO:0008989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N1-methylguanine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"rRNA (guanine-N1-)-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07233"],"synonyms":[{"name":"S-adenosyl-L-methionine:rRNA (guanine-1-N-)-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:rRNA (guanine-N1-)-methyltransferase activity","type":"related"},{"name":"ribosomal ribonucleate guanine 1-methyltransferase activity","type":"exact"}],"termid":"GO:0008989"}


id: MONDO:0032686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 35","secondary_identifiers":["MEDGEN:1679765","DOID:0111914","OMIM:618341","UMLS:C5193038"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 35","type":"related"},{"name":"SPGF35","type":"related"}],"termid":"MONDO:0032686","xrefs":{"Monarch":{"xref_id":"0032686"}}}


id: MONDO:0800419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer, familial, susceptibility to, 2","termid":"MONDO:0800419","xrefs":{"Monarch":{"xref_id":"0800419"}}}


id: PBO:0054556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1957","termid":"PBO:0054556"}


id: PBO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC1 like intracellular cholesterol transporter 1","termid":"PBO:0061299"}


id: PBO:0030752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcriptional_response_to_pheromone_at_increased_pheromone_level_(obsolete_FYPO:0000985)","termid":"PBO:0030752"}


id: MONDO:0003971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the pylorus.","definition_xrefs":["NCIT:C6795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric pylorus carcinoma","secondary_identifiers":["UMLS:C1333787","MEDGEN:234301","DOID:6703"],"synonyms":[{"name":"cancer of gastric pylorus","type":"exact"},{"name":"cancer of pylorus of stomach","type":"exact"},{"name":"cancer of the gastric pylorus","type":"exact"},{"name":"cancer of the pylorus of the stomach","type":"exact"},{"name":"carcinoma of gastric pylorus","type":"exact"},{"name":"carcinoma of pylorus of stomach","type":"exact"},{"name":"carcinoma of the gastric pylorus","type":"exact"},{"name":"carcinoma of the pylorus of the stomach","type":"exact"},{"name":"gastric pylorus (stomach) cancer","type":"exact"},{"name":"gastric pylorus cancer","type":"exact"},{"name":"gastric pylorus carcinoma","type":"exact"}],"termid":"MONDO:0003971","xrefs":{"Monarch":{"xref_id":"0003971"}}}


id: PBO:0113304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; binds and transfers parental H3-H4 to Pol32p facilitating the transfer of parental histones to the lagging strand via Pol1p during DNA replication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0113304"}


id: PBO:0001462
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.38","termid":"PBO:0001462"}


id: PBO:0058175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4470","termid":"PBO:0058175"}


id: SO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar amino acid encoded by the codons TGT and TGC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine","synonyms":[{"name":"C","type":"exact"},{"name":"Cys","type":"exact"}],"termid":"SO:0001447"}


id: GO:0050305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(carboxymethyl)-D-alanine + H2O + NAD+ = glycine + H+ + NADH + pyruvate.","definition_xrefs":["EC:1.5.1.22","RHEA:14061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"strombine dehydrogenase activity","secondary_identifiers":["MetaCyc:STROMBINE-DEHYDROGENASE-RXN","KEGG_REACTION:R00368"],"synonyms":[{"name":"N-(carboxymethyl)-D-alanine: NAD+ oxidoreductase activity","type":"related"},{"name":"N-(carboxymethyl)-D-alanine:NAD+ oxidoreductase (glycine-forming)","type":"related"},{"name":"strombine[N-(carboxymethyl)-D-alanine]dehydrogenase activity","type":"related"}],"termid":"GO:0050305"}


id: PBO:0077501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 219","termid":"PBO:0077501"}


id: GO:0035090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Retaining the established polarization of a cell along its apical/basal axis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of cell polarity","termid":"GO:0030011"},{"relation_name":"is_a","term_name":"establishment or maintenance of apical/basal cell polarity","termid":"GO:0035088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of apical/basal cell polarity","termid":"GO:0035090"}


id: PR:Q9UTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyridoxine-5'-phosphate oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10851:SF0","PRO:DNx","OMA:SCHPO01911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.02","secondary_identifiers":["UniProtKB:Q9UTQ1"],"synonyms":[{"name":"PNP/PMP oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PNPOx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNPO","type":"exact"}],"termid":"PR:Q9UTQ1"}


id: MONDO:0003670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electrocardiographic finding of an injury in leads corresponding to the anatomic region of the posteroinferior wall of the heart.","definition_xrefs":["NCIT:C36068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"posteroinferior myocardial infarction","secondary_identifiers":["DOID:5843","MEDGEN:216044","UMLS:C1142433"],"synonyms":[{"name":"posteroinferior myocardial infarction by ECG finding","type":"exact"},{"name":"posteroinferior myocardial infarction by EKG finding","type":"exact"}],"termid":"MONDO:0003670","xrefs":{"Monarch":{"xref_id":"0003670"}}}


id: PATO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having an irregularly toothed edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erose","synonyms":[{"name":"jagged","type":"related"}],"termid":"PATO:0001368"}


id: PBO:0045612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 23 (pseudogene)","termid":"PBO:0045612"}


id: FYPO:0000658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA binding","synonyms":[{"name":"reduced DNA binding","type":"exact"}],"termid":"FYPO:0000658"}


id: MONDO:0009313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Grubben-de Cock-Borghgraef syndrome is a rare intellectual disability syndrome characterized by pre- and postnatal growth deficiency, generalized muscular hypotonia, developmental delay (particularly of speech and language), hypotrophy of distal extremities, small and puffy hands and feet, eczematous skin and dental anomalies (i.e. small, widely-spaced teeth). Partial agenesis of the corpus callosum and a selective immunoglobulin IgG2 subclass deficiency have also been reported in some patients.","definition_xrefs":["Orphanet:2101"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Grubben-de Cock-Borghgraef syndrome","secondary_identifiers":["MEDGEN:419108","GARD:2576","OMIM:233810","UMLS:C2931551","MESH:C537621"],"synonyms":[{"name":"Grubben de Cock Borghgraef syndrome","type":"related"},{"name":"developmental delay - hypotonia - extremities hypertrophy","type":"related"},{"name":"developmental delay-hypotonia-extremities hypertrophy syndrome","type":"exact"},{"name":"growth retardation, small and puffy hands and feet, and eczema","type":"related"},{"name":"severe growth retardation, developmental delay with hypotonia, hypotrophy of the distal extremities, dental anomalies, and eczematous skin","type":"related"}],"termid":"MONDO:0009313","xrefs":{"Monarch":{"xref_id":"0009313"}}}


id: PBO:0083672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum zinc transporter; part of a heterodimeric transporter with Msc2p that transfers zinc from the cytosol to the ER lumen; member of the cation diffusion facilitator family of efflux pumps; zinc-regulated directly through Zap1p; transcription induced under conditions of zinc deficiency","termid":"PBO:0083672"}


id: PBO:0065377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 5","termid":"PBO:0065377"}


id: PBO:0084746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrially-encoded 50-kD subunit of Endo.SceI; dimeric site-specific endonuclease that introduces double-stranded breaks at a number of well-defined sites in mitochondrial DNA, inducing homologous recombination; has a 26-bp recognition sequence in ATP6","termid":"PBO:0084746"}


id: PATO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits temperature variation or change.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"temperature","termid":"PATO:0000146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of temperature","termid":"PATO:0001304"}


id: MONDO:0007529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired dermis elastic tissue disorder with increased elastic tissue (obsolete MONDO:0016436)","termid":"MONDO:0016436"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"elastosis perforans serpiginosa","secondary_identifiers":["MedDRA:10014338","SCTID:49428008","icd11.foundation:1430012917","ICD10CM:L87.2","MESH:C536202","GARD:10103","Orphanet:79148","OMIM:130100","UMLS:C0221271","MEDGEN:65137"],"synonyms":[{"name":"Miescher elastoma","type":"related"},{"name":"elastoma Intrapapillare perforans verruciformis","type":"related"},{"name":"elastosis perforans serpiginosa","type":"exact"},{"name":"eps","type":"related"}],"termid":"MONDO:0007529","xrefs":{"Monarch":{"xref_id":"0007529"}}}


id: GO:0046399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucuronate, the anion of glucuronic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucuronate biosynthetic process","synonyms":[{"name":"glucuronate anabolism","type":"exact"},{"name":"glucuronate biosynthesis","type":"exact"},{"name":"glucuronate formation","type":"exact"},{"name":"glucuronate synthesis","type":"exact"}],"termid":"GO:0046399"}


id: PBO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Gos1 (predicted)","termid":"PBO:0000587"}


id: FYPO:0001476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of guanosine-diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal guanosine-diphosphatase activity","synonyms":[{"name":"abnormal GDPase activity","type":"exact"}],"termid":"FYPO:0001476"}


id: PBO:0039575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 3","termid":"PBO:0039575"}


id: FYPO:0005327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis does not occur.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"abolished error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"},{"name":"error-free translesion synthesis of cyclobutane pyrimidine dimers abolished","type":"related"}],"termid":"FYPO:0005327"}


id: MONDO:0015241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis-like syndrome, also known as Kuskokwim disease, is a very rare congenital contracture disorder, reported exclusively in Yup'ik Eskimos of the Kuskokwim River delta region of Alaska, characterized by multiple contractures of large joints (predominantly the knees and ankles) that present at birth or during childhood but are lifelong; deformities of the spine, pelvis and feet; and sometimes proximally or distally displaced patellae and muscle atrophy in the limbs with contractures. Additional radiological features include mild vertebral wedging, elongation of the vertebral pedicle, and clubbing of the distal clavicle. An autosomal recessive pattern of inheritance has been suggested.","definition_xrefs":["Orphanet:1149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-like syndrome","secondary_identifiers":["GARD:3150","ICD9:719.89","SCTID:702447002","MEDGEN:349229","OMIM:208200","UMLS:C1859709"],"synonyms":[{"name":"Kuskokwim disease","type":"exact"},{"name":"Kuskokwim syndrome","type":"related"},{"name":"arthrogryposis like disorder","type":"related"}],"termid":"MONDO:0015241","xrefs":{"Monarch":{"xref_id":"0015241"}}}


id: PBO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase Oct1 (predicted)","termid":"PBO:0000499"}


id: GO:0010165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz).","definition_xrefs":["GOC:sm","Wikipedia:X-ray"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ionizing radiation","termid":"GO:0010212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to X-ray","synonyms":[{"name":"response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:0010165"}


id: MONDO:0013733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"name":"obsolete accelerated tumor formation, susceptibility to (obsolete MONDO:0013733)","secondary_identifiers":["OMIM:614401"],"synonyms":[{"name":"ACTFS","type":"related"},{"name":"accelerated tumor formation, susceptibility to","type":"exact"}],"termid":"MONDO:0013733","xrefs":{"Monarch":{"xref_id":"0013733"}}}


id: GO:0010697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.","definition_xrefs":["GOC:tb","PMID:16792804","GOC:dph","PMID:18500339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle pole body separation","termid":"GO:0010695"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"negatively_regulates","term_name":"initial mitotic spindle pole body separation","termid":"GO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic spindle pole body separation","synonyms":[{"name":"negative regulation of SPB separation","type":"exact"}],"termid":"GO:0010697"}


id: PBO:0082570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Checkpoint protein; involved in the activation of the DNA damage and meiotic pachytene checkpoints; with Mec3p and Ddc1p, forms a clamp that is loaded onto partial duplex DNA; homolog of human and S. pombe Rad1 and U. maydis Rec1 proteins","termid":"PBO:0082570"}


id: PBO:0083144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF AIM10/YER087W","termid":"PBO:0083144"}


id: PBO:0070724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 29","termid":"PBO:0070724"}


id: PBO:0053139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6A","termid":"PBO:0053139"}


id: PBO:0072281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 10","termid":"PBO:0072281"}


id: FYPO:0000530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle arrest that normally occurs in response to pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal response to pheromone","termid":"FYPO:0000302"},{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"abnormal pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: abnormal","type":"related"}],"termid":"FYPO:0000530"}


id: MONDO:1011571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, domestic cat","termid":"MONDO:1010861"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, domestic cat","secondary_identifiers":["OMIA:000181-9685"],"termid":"MONDO:1011571","xrefs":{"Monarch":{"xref_id":"1011571"}}}


id: PBO:0090882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase Cbf5","termid":"PBO:0090882"}


id: PBO:0029797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_distribution","termid":"PBO:0029797"}


id: PBO:0086701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may be involved in phosphatase regulation and/or generation of precursor metabolites and energy","termid":"PBO:0086701"}


id: PBO:0053789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1040","termid":"PBO:0053789"}


id: PBO:0026945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_level_oscillation_during_mitotic_cell_cycle","termid":"PBO:0026945"}


id: GO:0043321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"natural killer cell degranulation","termid":"GO:0043320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of natural killer cell degranulation","synonyms":[{"name":"regulation of NK cell degranulation","type":"exact"},{"name":"regulation of NK cell granule exocytosis","type":"exact"},{"name":"regulation of natural killer cell granule exocytosis","type":"exact"}],"termid":"GO:0043321"}


id: PBO:0066174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase","termid":"PBO:0066174"}


id: MONDO:0005650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the arenaviridae.","definition_xrefs":["MESH:D001117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arenaviridae infectious disease","secondary_identifiers":["DOID:3944","ICD9:078.89","SCTID:3303004","EFO:0007150"],"synonyms":[{"name":"Arenaviridae caused disease or disorder","type":"exact"},{"name":"Arenaviridae disease or disorder","type":"exact"},{"name":"Arenaviridae infection","type":"related"},{"name":"arenavirus infection","type":"related"},{"name":"arenavirus infections","type":"related"},{"name":"arenavirus infectious disease","type":"exact"},{"name":"disease caused by arenavirus","type":"related"},{"name":"disease due to arenavirus","type":"exact"},{"name":"infection, Arenaviridae","type":"related"},{"name":"infection, arenavirus","type":"related"},{"name":"infections, Arenaviridae","type":"related"},{"name":"infections, arenavirus","type":"related"}],"termid":"MONDO:0005650","xrefs":{"Monarch":{"xref_id":"0005650"}}}


id: GO:0051329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase following cytokinesis which begins with G1 phase, proceeds through S phase and G2 phase and ends when mitotic prophase begins. During interphase the cell readies itself for mitosis and the replication of its DNA occurs.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interphase","termid":"GO:0051325"},{"relation_name":"is_a","term_name":"mitotic cell cycle phase","termid":"GO:0098763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic interphase","synonyms":[{"name":"interphase of mitotic cell cycle","type":"exact"}],"termid":"GO:0051329"}


id: PBO:0085899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in chitin biosynthesis by regulation of Chs3p export from the ER; relocalizes from bud neck to ER upon DNA replication stress","termid":"PBO:0085899"}


id: PBO:0072609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 4","termid":"PBO:0072609"}


id: MONDO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant form of pleural solitary fibrous tumor.","definition_xrefs":["MONDO:patterns/malignant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleural cancer","termid":"MONDO:0006294"},{"relation_name":"is_a","term_name":"pleural solitary fibrous tumor","termid":"MONDO:0021041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant pleural solitary fibrous tumor","secondary_identifiers":["DOID:0050695"],"synonyms":[{"name":"pleural solitary fibrous tumor, malignant","type":"exact"}],"termid":"MONDO:0000407","xrefs":{"Monarch":{"xref_id":"0000407"}}}


id: PBO:0083938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Galactose permease; required for utilization of galactose; also able to transport glucose","termid":"PBO:0083938"}


id: PBO:0070272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 7","termid":"PBO:0070272"}


id: FYPO:0001209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"},{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"polysaccharide absent from cell","synonyms":[{"name":"polysaccharide absent from cell during mitotic cell cycle","type":"related"},{"name":"polysaccharide absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001209"}


id: PBO:0057528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 645","termid":"PBO:0057528"}


id: PBO:0071962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS6KA2 antisense RNA 1","termid":"PBO:0071962"}


id: GO:1904888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cranial skeletal system over time, from its formation to the mature structure. The cranial skeletal system is the skeletal subdivision of the head, and includes the skull (cranium plus mandible), pharyngeal and/or hyoid apparatus.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000094","PMID:11262227","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial skeletal system development","synonyms":[{"name":"cranial skeleton development","type":"narrow"},{"name":"craniofacial development","type":"narrow"},{"name":"cranium development","type":"related"},{"name":"osteocranium development","type":"narrow"}],"termid":"GO:1904888"}


id: PBO:0042035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC88C divergent transcript","termid":"PBO:0042035"}


id: PBO:0061651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 22","termid":"PBO:0061651"}


id: GO:0140950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone deubiquitinase that cleaves ubiquitin from a histone H2A protein to which it is conjugated.","definition_xrefs":["PMID:20436459","PMID:18226187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deubiquitinase activity","termid":"GO:0140934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H2A deubiquitinase activity","synonyms":[{"name":"histone H2A deubiquitination","type":"related"}],"termid":"GO:0140950"}


id: MONDO:0003343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioblastoma that arises from the retina. It is typically a sign of von Hippel-Lindau disease. It may also be seen as an isolated entity without systemic involvement.","definition_xrefs":["NCIT:C39783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"hemangioblastoma","termid":"MONDO:0016748"},{"relation_name":"is_a","term_name":"hemangioma of retina","termid":"MONDO:0021541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal hemangioblastoma","secondary_identifiers":["UMLS:C0730303","DOID:5240","MEDGEN:152677"],"synonyms":[{"name":"hemangioblastoma of vasculature of retina","type":"exact"},{"name":"retinal capillary hemangioblastoma","type":"exact"},{"name":"retinal hemangioblastoma","type":"exact"},{"name":"vasculature of retina hemangioblastoma","type":"exact"}],"termid":"MONDO:0003343","xrefs":{"Monarch":{"xref_id":"0003343"}}}


id: GO:2000414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of thymocyte migration","termid":"GO:2000411"},{"relation_name":"is_a","term_name":"regulation of fibronectin-dependent thymocyte migration","termid":"GO:2000413"},{"relation_name":"negatively_regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"negative regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000414"}


id: PBO:0048224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest and DNA damage inducible alpha pseudogene 1","termid":"PBO:0048224"}


id: MONDO:0007964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clinically atypical nevi (usually exceeding 5 mm in diameter and having variable pigmentation and ill defined borders) with an increased risk for development of non-familial cutaneous malignant melanoma. Biopsies show melanocytic dysplasia. Nevi are clinically and histologically identical to the precursor lesions for melanoma in the B-K mole syndrome. (Stedman, 25th ed)","definition_xrefs":["MESH:D004416"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 2","secondary_identifiers":["UMLS:C1835044","DOID:10041","MEDGEN:331891","NCIT:C7584","OMIM:155601"],"synonyms":[{"name":"Atypical Mole syndrome","type":"exact"},{"name":"B-K Mole syndrome","type":"exact"},{"name":"CMM2","type":"related"},{"name":"dysplastic nevus syndrome","type":"exact"},{"name":"familial dysplastic nevi","type":"exact"},{"name":"melanoma, cutaneous malignant, 2","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 2","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 2","type":"related"}],"termid":"MONDO:0007964","xrefs":{"Monarch":{"xref_id":"0007964"}}}


id: PBO:0114285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription factor A","termid":"PBO:0114285"}


id: GO:0015759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["ISBN:0198506732","GOC:jl","PMID:3034860","PMID:6756954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"beta-glucoside transport","termid":"GO:0015759"}


id: PBO:0076941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tissue factor pathway inhibitor 2","termid":"PBO:0076941"}


id: MONDO:0006069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hormonally functioning or non-functioning pituitary gland adenocarcinoma that produces corticotropin. It may be associated with Cushing disease.","definition_xrefs":["NCIT:C5964"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"functioning pituitary gland neoplasm","termid":"MONDO:0003604"},{"relation_name":"is_a","term_name":"pituitary adenocarcinoma","termid":"MONDO:0017582"},{"relation_name":"is_a","term_name":"ACTH-producing pituitary gland neoplasm","termid":"MONDO:0045058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ACTH-producing pituitary gland carcinoma","secondary_identifiers":["EFO:1000067","UMLS:C1334556","DOID:6276","MEDGEN:233657"],"synonyms":[{"name":"ACTH producing pituitary gland carcinoma","type":"exact"},{"name":"malignant ACTH producing neoplasm of pituitary","type":"exact"},{"name":"malignant ACTH producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant ACTH producing neoplasm of the pituitary","type":"exact"},{"name":"malignant ACTH producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant ACTH producing pituitary gland neoplasm","type":"exact"},{"name":"malignant ACTH producing pituitary gland tumor","type":"exact"},{"name":"malignant ACTH producing pituitary gland tumour","type":"exact"},{"name":"malignant ACTH producing pituitary neoplasm","type":"exact"},{"name":"malignant ACTH producing pituitary tumor","type":"exact"},{"name":"malignant ACTH producing pituitary tumour","type":"exact"},{"name":"malignant ACTH producing tumor of pituitary","type":"exact"},{"name":"malignant ACTH producing tumor of pituitary gland","type":"exact"},{"name":"malignant ACTH producing tumor of the pituitary","type":"exact"},{"name":"malignant ACTH producing tumor of the pituitary gland","type":"exact"},{"name":"malignant ACTH producing tumour of pituitary","type":"exact"},{"name":"malignant ACTH producing tumour of pituitary gland","type":"exact"},{"name":"malignant ACTH producing tumour of the pituitary","type":"exact"},{"name":"malignant ACTH producing tumour of the pituitary gland","type":"exact"},{"name":"malignant ACTH secreting neoplasm of pituitary","type":"exact"},{"name":"malignant ACTH secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant ACTH secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant ACTH secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant ACTH secreting pituitary gland tumor","type":"exact"},{"name":"malignant ACTH secreting pituitary gland tumour","type":"exact"},{"name":"malignant ACTH secreting pituitary neoplasm","type":"exact"},{"name":"malignant ACTH secreting pituitary tumor","type":"exact"},{"name":"malignant ACTH secreting pituitary tumour","type":"exact"},{"name":"malignant ACTH secreting tumor of pituitary","type":"exact"},{"name":"malignant ACTH secreting tumor of pituitary gland","type":"exact"},{"name":"malignant ACTH secreting tumor of the pituitary","type":"exact"},{"name":"malignant ACTH secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant ACTH secreting tumour of pituitary","type":"exact"},{"name":"malignant ACTH secreting tumour of pituitary gland","type":"exact"},{"name":"malignant ACTH secreting tumour of the pituitary","type":"exact"},{"name":"malignant ACTH secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant Corticotropinoma of pituitary","type":"exact"},{"name":"malignant Corticotropinoma of pituitary gland","type":"exact"},{"name":"malignant Corticotropinoma of the pituitary","type":"exact"},{"name":"malignant Corticotropinoma of the pituitary gland","type":"exact"},{"name":"malignant adrenocorticotropin producing neoplasm of pituitary","type":"exact"},{"name":"malignant adrenocorticotropin producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant adrenocorticotropin producing neoplasm of the pituitary","type":"exact"},{"name":"malignant adrenocorticotropin producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant adrenocorticotropin producing pituitary gland neoplasm","type":"exact"},{"name":"malignant adrenocorticotropin producing pituitary gland tumor","type":"exact"},{"name":"malignant adrenocorticotropin producing pituitary gland tumour","type":"exact"},{"name":"malignant adrenocorticotropin producing pituitary neoplasm","type":"exact"},{"name":"malignant adrenocorticotropin producing pituitary tumor","type":"exact"},{"name":"malignant adrenocorticotropin producing pituitary tumour","type":"exact"},{"name":"malignant adrenocorticotropin producing tumor of pituitary","type":"exact"},{"name":"malignant adrenocorticotropin producing tumor of pituitary gland","type":"exact"},{"name":"malignant adrenocorticotropin producing tumor of the pituitary","type":"exact"},{"name":"malignant adrenocorticotropin producing tumor of the pituitary gland","type":"exact"},{"name":"malignant adrenocorticotropin producing tumour of pituitary","type":"exact"},{"name":"malignant adrenocorticotropin producing tumour of pituitary gland","type":"exact"},{"name":"malignant adrenocorticotropin producing tumour of the pituitary","type":"exact"},{"name":"malignant adrenocorticotropin producing tumour of the pituitary gland","type":"exact"},{"name":"malignant adrenocorticotropin secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant adrenocorticotropin secreting pituitary gland tumor","type":"exact"},{"name":"malignant adrenocorticotropin secreting pituitary gland tumour","type":"exact"},{"name":"malignant adrenocorticotropin secreting pituitary neoplasm","type":"exact"},{"name":"malignant adrenocorticotropin secreting pituitary tumor","type":"exact"},{"name":"malignant adrenocorticotropin secreting pituitary tumour","type":"exact"},{"name":"malignant corticotropin secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant pituitary Corticotropinoma","type":"exact"},{"name":"malignant pituitary gland Corticotropinoma","type":"exact"}],"termid":"MONDO:0006069","xrefs":{"Monarch":{"xref_id":"0006069"}}}


id: GO:0008615
data:
  {"annotated_genes":["SJAG_01881","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63831,75228],"is_not":false,"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine metabolic process","termid":"GO:0008614"},{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"pyridoxine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"pyridoxine anabolism","type":"exact"},{"name":"pyridoxine biosynthesis","type":"exact"},{"name":"pyridoxine formation","type":"exact"},{"name":"pyridoxine synthesis","type":"exact"}],"termid":"GO:0008615","terms_by_termid":{"GO:0008615":null}}


id: MONDO:0032824
data:
  {"annotated_genes":["SJAG_02776"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86763],"is_not":false,"summary":null,"term":"MONDO:0032824"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02776":null},"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol biosynthesis defect 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231419","MEDGEN:1684749","OMIM:618590"],"synonyms":[{"name":"GLYCOSYLPHOSPHATIDYLINOSITOL BIOSYNTHESIS DEFECT 21","type":"related"},{"name":"GPIBD21","type":"related"},{"name":"Neurodevelopmental Disorder With Brain Anomalies, Seizures, and Scoliosis","type":"related"}],"termid":"MONDO:0032824","terms_by_termid":{"MONDO:0032824":null},"xrefs":{"Monarch":{"xref_id":"0032824"}}}


id: FYPO:0005292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to hydroxyurea. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to hydroxyurea","synonyms":[{"name":"increased chromatin binding during cellular response to HU","type":"exact"}],"termid":"FYPO:0005292"}


id: PBO:0036486
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the japonicus gene is about 500 amino acids longer...possibly a gene merge in japoinicus as this does not splice to adjacent gene","termid":"PBO:0036486"}


id: PBO:0053615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 654","termid":"PBO:0053615"}


id: PBO:0065574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin-endoperoxide synthase 2","termid":"PBO:0065574"}


id: GO:1905512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of short-term synaptic potentiation.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:15470145","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"regulates","term_name":"short-term synaptic potentiation","termid":"GO:1990926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of short-term synaptic potentiation","synonyms":[{"name":"regulation of synaptic facilitation","type":"exact"}],"termid":"GO:1905512"}


id: PBO:0069072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 319, pseudogene","termid":"PBO:0069072"}


id: GO:2000180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of androgen biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"negatively_regulates","term_name":"androgen biosynthetic process","termid":"GO:0006702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of androgen biosynthetic process","synonyms":[{"name":"negative regulation of androgen anabolism","type":"exact"},{"name":"negative regulation of androgen biosynthesis","type":"exact"},{"name":"negative regulation of androgen formation","type":"exact"},{"name":"negative regulation of androgen synthesis","type":"exact"}],"termid":"GO:2000180"}


id: PBO:0091683
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA-Like Protein","termid":"PBO:0091683"}


id: MONDO:0037398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary disease characterized by primary or nonbacteremic pneumonia most frequently arising in an intensive care setting, or bacteremic pneumonia, which is typically associated with neutropenia. Chronic lower respiratory tract infection with development of episodes of pneumonia is common in patients with cystic fibrosis. Acute infections are potentially life-threatening. Patients present with fever, chills, dyspnea, cyanosis, productive cough, as well as signs of severe systemic toxicity. Alveolar hemorrhage, necrosis, and, eventually, cavity formation, are commonly seen.","definition_xrefs":["Orphanet:90066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"Pseudomonas aeruginosa infectious disease","termid":"MONDO:0040732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by pseudomonas aeruginosa infection","secondary_identifiers":["MEDGEN:852026","GARD:13613","UMLS:C0920182","icd11.foundation:801706385"],"termid":"MONDO:0037398","xrefs":{"Monarch":{"xref_id":"0037398"}}}


id: PATO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"contractile","termid":"PATO:0001690"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased contractility","synonyms":[{"name":"low contractility","type":"exact"}],"termid":"PATO:0001581"}


id: MONDO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hemoglobinopathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobinopathy","termid":"MONDO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired hemoglobinopathy","secondary_identifiers":["SCTID:127039000","UMLS:C1263995","MEDGEN:688237"],"synonyms":[{"name":"acquired hemoglobinopathy","type":"exact"}],"termid":"MONDO:0044349","xrefs":{"Monarch":{"xref_id":"0044349"}}}


id: GO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter and stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["GOC:dph","PMID:15302821"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter (obsolete GO:0061427)","termid":"GO:0061427"}


id: GO:0021796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in the creation of areas within the cerebral cortex that will direct the behavior of cell migration and differentiation as the cortex develops.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"telencephalon regionalization","termid":"GO:0021978"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex regionalization","synonyms":[{"name":"cerebral cortex arealization","type":"exact"},{"name":"cerebral cortex pattern biosynthesis","type":"exact"},{"name":"cerebral cortex pattern formation","type":"exact"}],"termid":"GO:0021796"}


id: PBO:0053277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B3","termid":"PBO:0053277"}


id: FYPO:0006485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4)P2 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4-bisphosphate level","type":"exact"}],"termid":"FYPO:0006485"}


id: MONDO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the subglottic area of the larynx. The vast majority of cases are squamous cell carcinomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subglottis neoplasm","termid":"MONDO:0000933"},{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"subglottis cancer","secondary_identifiers":["SCTID:363430007","UMLS:C0153485","ICD10CM:C32.2","ICD9:161.2","DOID:11472","NCIT:C3546","MEDGEN:57562"],"synonyms":[{"name":"Ca larynx - subglottis","type":"exact"},{"name":"cancer of subglottis","type":"exact"},{"name":"malignant neoplasm of subglottis","type":"exact"},{"name":"malignant neoplasm of the subglottis","type":"exact"},{"name":"malignant subglottic neoplasm","type":"exact"},{"name":"malignant subglottic tumor","type":"exact"},{"name":"malignant subglottic tumour","type":"exact"},{"name":"malignant subglottis neoplasm","type":"exact"},{"name":"malignant subglottis tumor","type":"exact"},{"name":"malignant subglottis tumour","type":"exact"},{"name":"malignant tumor of subglottis","type":"exact"},{"name":"malignant tumor of the subglottis","type":"exact"},{"name":"malignant tumour of subglottis","type":"exact"},{"name":"malignant tumour of the subglottis","type":"exact"},{"name":"subglottis cancer","type":"exact"}],"termid":"MONDO:0001293","xrefs":{"Monarch":{"xref_id":"0001293"}}}


id: PBO:0031898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartate aminotransferase Maa1 (predicted)","termid":"PBO:0031898"}


id: FYPO:0007679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier (normally located in the mating-type region) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:33568651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"increased replication fork arrest at RTS1 barrier","termid":"FYPO:0007679"}


id: GO:2000655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to testosterone stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to testosterone stimulus","termid":"GO:2000654"},{"relation_name":"negatively_regulates","term_name":"cellular response to testosterone stimulus","termid":"GO:0071394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to testosterone stimulus","termid":"GO:2000655"}


id: PBO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 14","termid":"PBO:0070643"}


id: PBO:0028806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028806"}


id: GO:0072362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glycolysis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072362)","synonyms":[{"name":"regulation of glycolysis by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072362"}


id: PBO:0082847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding protein of the mitochondrial intermembrane space; evolutionarily conserved; may be involved in delivering copper from the matrix to the cytochrome c oxidase complex; contains a twin CX9C motif","termid":"PBO:0082847"}


id: PBO:0055860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 6","termid":"PBO:0055860"}


id: PBO:0057552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 665","termid":"PBO:0057552"}


id: PBO:0046610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 12","termid":"PBO:0046610"}


id: PBO:0071637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 1","termid":"PBO:0071637"}


id: PBO:0082551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central kinetochore associated protein; mediates mitotic progression; interacts with several central kinetochore proteins and centromeric histone Cse4p; role in resistance to oxidative stress; similar to Slk19p; YBP2 has a paralog, YBP1, that arose from the whole genome duplication","termid":"PBO:0082551"}


id: PBO:0031854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_respiration","termid":"PBO:0031854"}


id: PBO:0079136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSNAX-DISC1 readthrough (NMD candidate)","termid":"PBO:0079136"}


id: GO:1990440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:21113145"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990440)","synonyms":[{"name":"ER stress-induced upregulation of transcription","type":"broad"},{"name":"activation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of transcription induced by ER stress","type":"broad"},{"name":"upregulation of Pol II transcription induced by ER stress","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1990440"}


id: PBO:0029495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_cell_cycle_phase","termid":"PBO:0029495"}


id: MONDO:0850115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset obesity-hyperphagia-severe developmental delay syndrome","secondary_identifiers":["GARD:19685","Orphanet:99704"],"termid":"MONDO:0850115","xrefs":{"Monarch":{"xref_id":"0850115"}}}


id: PBO:0003967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein Oca3/ ER membrane protein complex Ecm2 (predicted)","termid":"PBO:0003967"}


id: GO:0080007
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103270],"is_not":false,"summary":null,"term":"GO:0080007"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-nitrosoglutathione + NADH + H+ = S-(hydroxysulfenamide)glutathione + NAD+.","definition_xrefs":["PMID:27094420","PMID:30795534","PMID:11260719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"S-nitrosoglutathione reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-17884","RHEA:78371"],"termid":"GO:0080007","terms_by_termid":{"GO:0080007":null}}


id: PBO:0068293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase 2","termid":"PBO:0068293"}


id: PBO:0009551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pet117 cytochrome c oxidase assembly protein (predicted)","termid":"PBO:0009551"}


id: GO:1900625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"positively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte aggregation","synonyms":[{"name":"activation of monocyte aggregation","type":"narrow"},{"name":"activation of mononuclear phagocyte aggregation","type":"exact"},{"name":"positive regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"up regulation of monocyte aggregation","type":"exact"},{"name":"up regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"up-regulation of monocyte aggregation","type":"exact"},{"name":"up-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"upregulation of monocyte aggregation","type":"exact"},{"name":"upregulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900625"}


id: PBO:0072293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 11","termid":"PBO:0072293"}


id: MONDO:0015651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurocutaneous syndrome with epilepsy (obsolete MONDO:0015651)","secondary_identifiers":["Orphanet:166466"],"termid":"MONDO:0015651","xrefs":{"Monarch":{"xref_id":"0015651"}}}


id: GO:0060817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes specifically on the paternal X-chromosome in the XX sex.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of paternal X chromosome (obsolete GO:0060817)","termid":"GO:0060817"}


id: PBO:0044113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 83","termid":"PBO:0044113"}


id: PBO:0028942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028942"}


id: PBO:0109263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrograde transport protein, Golgi to ER, Erd1/Gmn2","termid":"PBO:0109263"}


id: PBO:0080324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 88 pseudogene","termid":"PBO:0080324"}


id: MONDO:0859006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"proximal femoral focal deficiency","secondary_identifiers":["MEDGEN:609280","Orphanet:633228","UMLS:C0431996"],"termid":"MONDO:0859006","xrefs":{"Monarch":{"xref_id":"0859006"}}}


id: PBO:0085767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase primarily involved in telomere length regulation; contributes to cell cycle checkpoint control in response to DNA damage; acts with Red1p and Mec1p to promote interhomolog recombination by phosphorylation of Hop1; functionally redundant with Mec1p; regulates P-body formation induced by replication stress; homolog of human ataxia-telangiectasia mutated (ATM) gene","termid":"PBO:0085767"}


id: FYPO:0007049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular stress response to zinc ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to zinc ion","termid":"FYPO:0001546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during stress response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during stress response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to excess zinc","type":"exact"},{"name":"decreased RNA level during cellular response to high zinc level","type":"exact"},{"name":"decreased RNA level during cellular response to replete zinc","type":"related"},{"name":"decreased RNA level during cellular stress response to zinc ion","type":"exact"},{"name":"decreased RNA level during response to zinc ion stress","type":"exact"},{"name":"decreased RNA level during response to zinc toxicity","type":"related"},{"name":"decreased RNA level during stress response to zinc","type":"exact"},{"name":"decreased RNA level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during stress response to zinc ion","type":"narrow"},{"name":"decreased transcript level during stress response to zinc ion","type":"exact"},{"name":"reduced RNA level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007049"}


id: MONDO:0017758
data:
  {"annotated_genes":["SJAG_01466","SJAG_03447","SJAG_04042","SJAG_03712","SJAG_01616","SJAG_00835","SJAG_04459","SJAG_03362","SJAG_04425","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011790"},{"annotations":[86398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013761"},{"annotations":[85096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[85025,85026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[85003,85002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[85614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[86434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[85858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032705"},{"annotations":[86777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013382"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_01199":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_03362":null,"SJAG_03447":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of vitamin and non-protein cofactor absorption and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21350","MEDGEN:1842689","Orphanet:309827","icd11.foundation:1112006621","UMLS:C5681037"],"synonyms":[{"name":"disorder of vitamin and non-protein cofactor absorption and transport","type":"exact"}],"termid":"MONDO:0017758","terms_by_termid":{"MONDO:0009238":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null,"MONDO:0011790":null,"MONDO:0013382":null,"MONDO:0013761":null,"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0017758"}}}


id: MONDO:0009768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of oculodentodigital dysplasia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"oculodentodigital dysplasia","termid":"MONDO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"oculodentodigital dysplasia, autosomal recessive","secondary_identifiers":["UMLS:C2749477","GARD:15213","OMIM:257850","MEDGEN:412708","MESH:C567605"],"synonyms":[{"name":"ODDD, autosomal recessive","type":"related"},{"name":"ODOD recessive","type":"related"},{"name":"ODOD, autosomal recessive","type":"related"},{"name":"autosomal recessive oculodentodigital dysplasia","type":"exact"},{"name":"oculodentodigital dysplasia, autosomal recessive","type":"exact"},{"name":"oculodentoosseous dysplasia recessive","type":"related"},{"name":"oculodentoosseous dysplasia, autosomal recessive","type":"related"}],"termid":"MONDO:0009768","xrefs":{"Monarch":{"xref_id":"0009768"}}}


id: MOD:00935
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Oxidation of methionine to methionine sulfoxide with neutral loss of CH3SOH.","definition_xrefs":["PubMed:18688235","PubMed:9004526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine oxidation with neutral loss of 64 Da","termid":"MOD:00935"}


id: PBO:0062760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 5","termid":"PBO:0062760"}


id: GO:1904719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of AMPA glutamate receptor clustering.","definition_xrefs":["GOC:TermGenie","PMID:21558424","GO_REF:0000058","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of postsynaptic membrane organization","termid":"GO:1901628"},{"relation_name":"is_a","term_name":"positive regulation of receptor clustering","termid":"GO:1903911"},{"relation_name":"is_a","term_name":"regulation of AMPA glutamate receptor clustering","termid":"GO:1904717"},{"relation_name":"positively_regulates","term_name":"AMPA glutamate receptor clustering","termid":"GO:0097113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of AMPA glutamate receptor clustering","synonyms":[{"name":"activation of AMPA glutamate receptor clustering","type":"narrow"},{"name":"activation of AMPA receptor clustering","type":"narrow"},{"name":"activation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"narrow"},{"name":"positive regulation of AMPA receptor clustering","type":"exact"},{"name":"positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA receptor clustering","type":"exact"},{"name":"up regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA receptor clustering","type":"exact"},{"name":"up-regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA receptor clustering","type":"exact"},{"name":"upregulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"}],"termid":"GO:1904719"}


id: PBO:0042534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 1","termid":"PBO:0042534"}


id: MONDO:0003989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, malignant germ cell tumor arising from the ovary. It is characterized by the presence of embryoid bodies which resemble early embryos.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyembryoma","termid":"MONDO:0015863"},{"relation_name":"is_a","term_name":"malignant non-dysgerminomatous germ cell tumor of ovary","termid":"MONDO:0016096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"polyembryoma of the ovary","secondary_identifiers":["DOID:6774","NCIT:C39990","UMLS:C1514199","ONCOTREE:OPE","MEDGEN:271323"],"synonyms":[{"name":"ovarian polyembryoma","type":"exact"},{"name":"polyembryoma","type":"related"}],"termid":"MONDO:0003989","xrefs":{"Monarch":{"xref_id":"0003989"}}}


id: GO:0120013
data:
  {"annotated_genes":["SJAG_16459","SJAG_00576","SJAG_03721","SJAG_03710","SJAG_06440","SJAG_01225","SJAG_01305","SJAG_03718","SJAG_03416","SJAG_02323","SJAG_01229","SJAG_04370","SJAG_00230","SJAG_02375","SJAG_03741","SJAG_01722","SJAG_03172","SJAG_03746","SJAG_01329","SJAG_01590","SJAG_00355","SJAG_03851","SJAG_03338"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108459],"is_not":false,"summary":null,"term":"GO:0120013"},{"annotations":[101074,102006,69860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[97329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[76078,73125,76304,74209,69709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"},{"annotations":[107326,107452,103836,106543,90662,88978,105652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120014"},{"annotations":[111129,94010,76889,102404,116033,108010,109169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120015"}]},"cv_name":"molecular_function","definition":"Removes a lipid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. This results in intermembrane transfer of lipids.","definition_xrefs":["GOC:krc","PMID:24220498","PMID:20823909","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lipid transfer activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9856510","Reactome:R-HSA-9856502"],"synonyms":[{"name":"intermembrane lipid transfer activity","type":"exact"},{"name":"lipid carrier activity","type":"exact"}],"termid":"GO:0120013","terms_by_termid":{"GO:0008526":null,"GO:0120013":null,"GO:0120014":null,"GO:0120015":null,"GO:0120019":null,"GO:1990050":null}}


id: GO:0055028
data:
  {"annotated_genes":["SJAG_00851","SJAG_02045","SJAG_01297","SJAG_01613","SJAG_00113","SJAG_02336","SJAG_01224","SJAG_03073","SJAG_00140"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91130,98396,98993,101206,103667,108042],"is_not":false,"summary":null,"term":"GO:0055028"},{"annotations":[94959,103530,97345],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"}]},"cv_name":"cellular_component","definition":"Arrays of microtubules underlying and connected to the plasma membrane in the cortical cytosol.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule","termid":"GO:0005881"},{"relation_name":"part_of","term_name":"cortical microtubule cytoskeleton","termid":"GO:0030981"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00851":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"cortical microtubule","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055028","terms_by_termid":{"GO:0055028":null,"GO:1903754":null}}


id: MONDO:1011603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, crab-eating macaque","secondary_identifiers":["OMIA:000284-9541"],"termid":"MONDO:1011603","xrefs":{"Monarch":{"xref_id":"1011603"}}}


id: GO:0141131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + an N6-methyl-2'-deoxyadenosine in DNA + O2 = a 2'-deoxyadenosine in DNA + CO2 + formaldehyde + succinate.","definition_xrefs":["RHEA:49524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA demethylase activity","termid":"GO:0035514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"DNA N6-methyladenine demethylase activity","secondary_identifiers":["EC:1.14.11.51"],"synonyms":[{"name":"DNA N(6)-methyladenine demethylase activity","type":"exact"}],"termid":"GO:0141131"}


id: PBO:0080039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 25","termid":"PBO:0080039"}


id: GO:0018258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of proteins via 04 atom of hydroxyproline to form O4-glycosyl-L-hydroxyproline; the most common form is arabinofuranosyl-4-proline.","definition_xrefs":["RESID:AA0212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxyproline","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxyproline","type":"exact"}],"termid":"GO:0018258"}


id: GO:0050845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of teichuronic acid, a polymer containing chains of uronic acids and N-acetylglucosamine found in the cell wall, membrane or capsule of Gram-positive bacteria.","definition_xrefs":["ISBN:0815108893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"cell wall macromolecule biosynthetic process","termid":"GO:0044038"},{"relation_name":"is_a","term_name":"teichuronic acid metabolic process","termid":"GO:0050846"},{"relation_name":"part_of","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044281","GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"teichuronic acid biosynthetic process","synonyms":[{"name":"teichuronic acid anabolism","type":"exact"},{"name":"teichuronic acid biosynthesis","type":"exact"},{"name":"teichuronic acid formation","type":"exact"},{"name":"teichuronic acid synthesis","type":"exact"}],"termid":"GO:0050845"}


id: PBO:0070650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 21","termid":"PBO:0070650"}


id: FYPO:0002656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased actin filament binding","synonyms":[{"name":"decreased F-actin binding","type":"exact"},{"name":"decreased filamentous actin binding","type":"related"},{"name":"decreased protein-protein interaction with actin filament","type":"exact"},{"name":"reduced actin filament binding","type":"exact"}],"termid":"FYPO:0002656"}


id: PR:P22774-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:P22774-1.","definition_xrefs":["PRO:DNx","UniProtKB:P22774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","termid":"PR:P22774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial isoform Long (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:P22774-1"],"synonyms":[{"name":"Spom972h-HSPA9/iso:Long","type":"exact"},{"name":"heat shock 70 kDa protein, mitochondrial isoform Mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22774-1"}


id: MONDO:0021040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm involving the pancreas.","definition_xrefs":["NCIT:C3305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic neoplasm","secondary_identifiers":["UMLS:C0030297","EFO:0003860","ONCOTREE:PANCREAS","MESH:D010190","MEDGEN:18279","SCTID:126859007"],"synonyms":[{"name":"neoplasm of pancreas","type":"exact"},{"name":"neoplasm of the pancreas","type":"exact"},{"name":"pancreas","type":"related"},{"name":"pancreas neoplasm","type":"exact"},{"name":"pancreas neoplasm (disease)","type":"exact"},{"name":"pancreas tumor","type":"exact"},{"name":"pancreas tumour","type":"exact"},{"name":"pancreatic neoplasm","type":"exact"},{"name":"pancreatic tumor","type":"exact"},{"name":"pancreatic tumour","type":"exact"},{"name":"tumor of pancreas","type":"exact"},{"name":"tumor of the pancreas","type":"exact"},{"name":"tumour of pancreas","type":"exact"},{"name":"tumour of the pancreas","type":"exact"}],"termid":"MONDO:0021040","xrefs":{"Monarch":{"xref_id":"0021040"}}}


id: MONDO:0100201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vertebral column disorder caused by degeneration of intervertebral disks of the lumbar spine. One of the most common musculoskeletal disorders, it has strong genetic determinants.","definition_xrefs":["OMIM:603932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar disk disease","secondary_identifiers":["MEDGEN:67462","UMLS:C0221775"],"termid":"MONDO:0100201","xrefs":{"Monarch":{"xref_id":"0100201"}}}


id: MONDO:0003475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of ependymoma characterized by well formed papillae. Tumor cell processes abutting capillaries are usually GFAP-positive. Differential diagnoses include choroid plexus papilloma, papillary meningioma and metastatic papillary carcinoma. (Adapted from WHO)","definition_xrefs":["NCIT:C4319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary ependymoma","secondary_identifiers":["UMLS:C0334578","DOID:5505","ICDO:9393/3","MEDGEN:90810"],"synonyms":[{"name":"papillary ependymoma","type":"exact"}],"termid":"MONDO:0003475","xrefs":{"Monarch":{"xref_id":"0003475"}}}


id: PR:000027549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:21516229","PomBase:MAH","PMID:15226425","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","termid":"PR:P04910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-beta unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC19G12.06c","synonyms":[{"name":"Spom-HTA2/UnMod","type":"exact"}],"termid":"PR:000027549"}


id: MONDO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that is caused by recurring atheroembolism in the lower extremities. It is characterized by cyanotic discoloration of the toes, usually the first, fourth, and fifth toes. Discoloration may extend to the lateral aspect of the foot. Despite the gangrene-like appearance, blue toes may respond to conservative therapy without amputation.","definition_xrefs":["MESH:D018438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol embolism","termid":"MONDO:0005568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue toe syndrome","secondary_identifiers":["MEDGEN:66940","UMLS:C0242645","DOID:14121"],"synonyms":[{"name":"purple toe syndrome","type":"exact"},{"name":"trash foot","type":"exact"},{"name":"warfarin blue toe syndrome","type":"exact"}],"termid":"MONDO:0001883","xrefs":{"Monarch":{"xref_id":"0001883"}}}


id: GO:0020025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Singlet microtubule that lie underneath the inner membrane pellicle complex and emanate from the basal ring of the conoid.","definition_xrefs":["GOC:mb","PMID:24800253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"subpellicular microtubule","termid":"GO:0020025"}


id: PBO:0058741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6865","termid":"PBO:0058741"}


id: GO:0006251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dCDP metabolic process","termid":"GO:0046062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dCDP catabolic process","synonyms":[{"name":"dCDP breakdown","type":"exact"},{"name":"dCDP catabolism","type":"exact"},{"name":"dCDP degradation","type":"exact"}],"termid":"GO:0006251"}


id: PBO:0080892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F2","termid":"PBO:0080892"}


id: RO:HOM0000066
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Biological homology that involves parts of the same organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_biological_homology_relationship_with","termid":"RO:HOM0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_iterative_homology_relationship_with","synonyms":[{"name":"iterative homologous to","type":"exact"}],"termid":"RO:HOM0000066"}


id: GO:0031781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 melanocortin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 3 melanocortin receptor binding","synonyms":[{"name":"type 3 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031781"}


id: PR:O13792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spliceosome RNA helicase BAT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01507","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase uap56 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.14c","secondary_identifiers":["UniProtKB:O13792"],"synonyms":[{"name":"Spom972h-DDX39B","type":"exact"}],"termid":"PR:O13792"}


id: PBO:0113034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; enzyme preparation shows antitumor activity; reference strain S288C has four copies of ASP3; ASP3-4 has a paralog, ASP3-2, that arose from a segmental duplication","termid":"PBO:0113034"}


id: PBO:0013094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human HID1 ortholog 2","termid":"PBO:0013094"}


id: GO:0060847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an endothelial cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"endothelial cell fate commitment","termid":"GO:0060839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell fate specification","termid":"GO:0060847"}


id: GO:0004652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group.","definition_xrefs":["EC:2.7.7.19"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide adenylyltransferase activity (obsolete GO:0004652)","synonyms":[{"name":"AMP polynucleotidylexotransferase activity","type":"related"},{"name":"ATP-polynucleotide adenylyltransferase activity","type":"related"},{"name":"ATP:polynucleotide adenylyltransferase activity","type":"related"},{"name":"ATP:polynucleotidylexotransferase activity","type":"related"},{"name":"NTP polymerase activity","type":"related"},{"name":"RNA adenylating enzyme activity","type":"related"},{"name":"RNA formation factors, PF1","type":"related"},{"name":"adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"related"},{"name":"poly(A) hydrolase activity","type":"related"},{"name":"poly(A) polymerase activity","type":"related"},{"name":"poly(A) synthetase activity","type":"related"},{"name":"poly-A polymerase activity","type":"related"},{"name":"polyadenylate nucleotidyltransferase activity","type":"related"},{"name":"polyadenylate polymerase activity","type":"related"},{"name":"polyadenylate synthetase activity","type":"related"},{"name":"polyadenylic acid polymerase activity","type":"related"},{"name":"polyadenylic polymerase activity","type":"related"},{"name":"terminal riboadenylate transferase activity","type":"related"}],"termid":"GO:0004652"}


id: PBO:0071699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 5","termid":"PBO:0071699"}


id: GO:0044206
data:
  {"annotated_genes":["SJAG_04354","SJAG_04709","SJAG_04713","SJAG_03708","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67586,87210,88197,91728,92727],"is_not":false,"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"Any process which produces UMP, uridine monophosphate, from derivatives of it (e.g. cytidine, uridine, cytosine) without de novo synthesis.","definition_xrefs":["PMID:15096496","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP biosynthetic process","termid":"GO:0006222"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide salvage","termid":"GO:0010138"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UMP salvage","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"UMP biosynthesis via nucleoside salvage pathway","type":"exact"},{"name":"UMP biosynthetic process via nucleoside salvage pathway","type":"exact"}],"termid":"GO:0044206","terms_by_termid":{"GO:0044206":null}}


id: PBO:0005056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght1","termid":"PBO:0005056"}


id: PBO:0030154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030154"}


id: PBO:0013456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial type I (2Fe-2S) ferredoxin Etp1/ cytochrome oxidase cofactor Cox15, fusion protein","termid":"PBO:0013456"}


id: PBO:0016973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR90","termid":"PBO:0016973"}


id: PATO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having or lacking sharp straight-edged teeth pointing to the apex.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edge shape","termid":"PATO:0002267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serration","termid":"PATO:0001976"}


id: MONDO:1012600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cystinuria that occurs in cats due to a mutation in the SLC3A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinuria, SLC3A1-related, domestic cat","secondary_identifiers":["OMIA:000256-9685"],"synonyms":[{"name":"cystinuria, type I - A, domestic cat","type":"related"}],"termid":"MONDO:1012600","xrefs":{"Monarch":{"xref_id":"1012600"}}}


id: PBO:0053498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 477","termid":"PBO:0053498"}


id: GO:0016049
data:
  {"annotated_genes":["SJAG_01017","SJAG_02838","SJAG_03486","SJAG_01456","SJAG_00514","SJAG_02723","SJAG_04509","SJAG_03602","SJAG_04322","SJAG_00244","SJAG_02169","SJAG_04724","SJAG_03705","SJAG_02392","SJAG_00216","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89611,95608,94337],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[87637,93777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[106652,117716,110557,99527,116289,103278,87801],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051523"},{"annotations":[90480],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[106452],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0030307"},{"annotations":[114857],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"},{"annotations":[98217],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03602":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048591"],"synonyms":[{"name":"cell expansion","type":"related"},{"name":"cellular growth","type":"exact"},{"name":"growth of cell","type":"exact"},{"name":"metabolic process resulting in cell growth","type":"related"},{"name":"metabolism resulting in cell growth","type":"related"},{"name":"non-developmental cell growth","type":"related"},{"name":"non-developmental growth of a unicellular organism","type":"related"}],"termid":"GO:0016049","terms_by_termid":{"GO:0030307":null,"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061387":null}}


id: PBO:0060281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 15","termid":"PBO:0060281"}


id: MONDO:0016086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bone disease characterized by avascular necrosis of the navicular bone in children. Patients present with sudden unexplained foot pain, inability to bear weight, and limping. Radiographic features include flattening, fragmentation, and patchy sclerosis of the navicular bone. Soft tissue swelling may be associated. The condition is most commonly unilateral and self-limiting. Boys are more often affected than girls.","definition_xrefs":["Orphanet:563991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondritis of tarsal/metatarsal bone","secondary_identifiers":["SCTID:203392007","Orphanet:2054","DOID:11760","GARD:6842","ICD9:732.5","UMLS:C0158444","MEDGEN:510539"],"synonyms":[{"name":"Kohler disease","type":"exact"},{"name":"Kohler's Osteochondrosis of the tarsal navicular","type":"related"},{"name":"Kohler's disease","type":"exact"},{"name":"Kohler's disease of the tarsal navicular","type":"related"},{"name":"Osteochondrosis of the tarsal bone","type":"exact"},{"name":"aseptic necrosis of the tarsal bone","type":"exact"},{"name":"juvenile osteochondrosis of foot","type":"exact"},{"name":"navicular Osteochondrosis","type":"related"},{"name":"osteochondritis of tarsal/metatarsal bone","type":"exact"}],"termid":"MONDO:0016086","xrefs":{"Monarch":{"xref_id":"0016086"}}}


id: PBO:0027555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiosis_II","termid":"PBO:0027555"}


id: GO:0048864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stem cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to its specific fate.","definition_xrefs":["CL:0000034","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell development","termid":"GO:0048864"}


id: PBO:0045700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type family member 5","termid":"PBO:0045700"}


id: PBO:0060998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing 3","termid":"PBO:0060998"}


id: PBO:0043020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHM like Rab escort protein","termid":"PBO:0043020"}


id: PBO:0087638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis prior to SNARE-mediated fusion; PtdIns[4,5]P2-binding protein that localizes to exocytic sites in an actin-independent manner, targeting and anchoring the exocyst with Sec3p; involved in exocyst assembly; direct downstream effector of Rho3p and Cdc42p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0087638"}


id: GO:0020002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane surrounding a host cell.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell plasma membrane","termid":"GO:0020002"}


id: GO:0141009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transposable element silencing mechanism in which mRNAs transcribed from transposons are targeted for degradation by a Piwi-associated RNA (piRNA).","definition_xrefs":["PMID:22121019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0140991"},{"relation_name":"is_a","term_name":"transposable element silencing by mRNA destabilization","termid":"GO:0141008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transposable element silencing by piRNA-mediated mRNA destabilization","synonyms":[{"name":"piRNA-mediated post-transcriptional retrotransposon silencing","type":"exact"},{"name":"piRNA-mediated retrotransposon silencing by mRNA destabilization","type":"narrow"}],"termid":"GO:0141009"}


id: PBO:0085231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS domain-containing serine/threonine protein kinase; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status; PSK1 has a paralog, PSK2, that arose from the whole genome duplication","termid":"PBO:0085231"}


id: PBO:0059130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH6 pseudogene 1","termid":"PBO:0059130"}


id: PBO:0067122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 167, pseudogene","termid":"PBO:0067122"}


id: PBO:0017479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within","termid":"PBO:0017479"}


id: MONDO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal ectasia","secondary_identifiers":["icd11.foundation:1703179358","MEDGEN:509803","ICD9:371.71","UMLS:C0155135","DOID:1436","SCTID:14748007"],"termid":"MONDO:0001950","xrefs":{"Monarch":{"xref_id":"0001950"}}}


id: FYPO:0006644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased, and some of the protein is present along the entire length of the spindle, during anaphase B of mitosis.","definition_xrefs":["PMID:28178520","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle midzone during anaphase B","termid":"FYPO:0004833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone, with protein distributed along spindle, during anaphase B","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone, with protein distributed along spindle, during anaphase B","type":"exact"},{"name":"decreased protein localization to mitotic spindle midzone, with protein distributed along spindle, during anaphase B during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle midzone, with protein distributed along spindle, during anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased protein localization to spindle midzone, with protein distributed along spindle, during anaphase B of mitosis","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone, with protein distributed along spindle, during anaphase B","type":"exact"}],"termid":"FYPO:0006644"}


id: FYPO:0001004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells to resume growth normally upon exiting G0 phase.","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000004"],"is_obsolete":false,"name":"viable upon G0 to G1 transition","termid":"FYPO:0001004"}


id: FYPO:0006192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid, has no septum, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001312","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000257","FYPO:0005447","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"normal volume aseptate spheroid vegetative cell","synonyms":[{"name":"normal volume aseptate rounded vegetative cell","type":"exact"}],"termid":"FYPO:0006192"}


id: PBO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain protein","termid":"PBO:0000503"}


id: MONDO:0014909
data:
  {"annotated_genes":["SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86957],"is_not":false,"summary":null,"term":"MONDO:0014909"}]},"cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAJB13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03794":null},"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 34","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16187","OMIM:617091","DOID:0110610","MEDGEN:934689","UMLS:C4310722"],"synonyms":[{"name":"CILD34","type":"exact"},{"name":"DNAJB13 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 34","type":"exact"},{"name":"ciliary dyskinesia, primary, 34, without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 34","type":"exact"},{"name":"primary ciliary dyskinesia 34 without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAJB13","type":"exact"},{"name":"primary ciliary dyskinesia type 34","type":"exact"}],"termid":"MONDO:0014909","terms_by_termid":{"MONDO:0014909":null},"xrefs":{"Monarch":{"xref_id":"0014909"}}}


id: MONDO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of meningitis (disease).","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infectious meningitis","termid":"MONDO:0004796"},{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic meningitis","secondary_identifiers":["DOID:10341","ICD10CM:G03.1","MEDGEN:509621","icd11.foundation:1597945150","SCTID:21664006","ICD9:322.2","UMLS:C0154653"],"synonyms":[{"name":"chronic meningitis (disease)","type":"exact"},{"name":"meningitis (disease), chronic","type":"exact"}],"termid":"MONDO:0001007","xrefs":{"Monarch":{"xref_id":"0001007"}}}


id: MONDO:0008579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toes, relative length of first and second","secondary_identifiers":["UMLS:C1861059","OMIM:189200","MEDGEN:396051"],"synonyms":[{"name":"toes, relative length of first and second","type":"exact"}],"termid":"MONDO:0008579","xrefs":{"Monarch":{"xref_id":"0008579"}}}


id: RO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between molecular entities A and B where A can physically interact with B and in doing so negatively regulates a process that B is capable of.  For example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B.","direct_ancestors":[{"relation_name":"is_a","term_name":"activity_directly_regulates_activity_of","termid":"RO:0002448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity_directly_negatively_regulates_activity_of","synonyms":[{"name":"molecularly decreases activity of","type":"exact"}],"termid":"RO:0002449"}


id: GO:0071244
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77341],"is_not":false,"summary":null,"term":"GO:0071244"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbon dioxide","termid":"GO:0010037"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbon dioxide","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071244","terms_by_termid":{"GO:0071244":null}}


id: PBO:0090170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, CBF1/Su(H)/LAG-1 family Cbf12","termid":"PBO:0090170"}


id: GO:0016779
data:
  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id: PBO:0065350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked 2","termid":"PBO:0065350"}


id: PBO:0028834
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028834"}


id: GO:0030074
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A thylakoid; as in, but not restricted to, the purple bacteria and relatives (Proteobacteria, ncbi_taxonomy_id:1224).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thylakoid (sensu Proteobacteria) (obsolete GO:0030074)","synonyms":[{"name":"thylakoid (sensu Proteobacteria)","type":"exact"}],"termid":"GO:0030074"}


id: GO:0034153
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"positive regulation of TLR6 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034153"}


id: PBO:0047592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen like 1","termid":"PBO:0047592"}


id: PATO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000705 relative threshold value (obsolete PATO:0000705)","termid":"PATO:0000705"}


id: GO:0038099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a complex containing a type II activin receptor, a type I activin receptor, and a coreceptor of the EGF-CFC family (e.g. Cripto or Cryptic, in mammals).","definition_xrefs":["GOC:signaling","PMID:15062104","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"nodal signaling pathway","termid":"GO:0038092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0023052"],"is_obsolete":false,"name":"nodal receptor complex assembly","synonyms":[{"name":"ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"nodal receptor complex formation","type":"exact"}],"termid":"GO:0038099"}


id: PBO:0060316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase pseudogene 1","termid":"PBO:0060316"}


id: FYPO:0003244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome takes place normally for some, but is decreased for other, specific introns.","definition_xrefs":["PMID:23754748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome","termid":"FYPO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased mRNA splicing, via spliceosome, intron-specific","synonyms":[{"name":"differential pre-mRNA splicing defects","type":"exact"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"intron-specific abnormal nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"intron-specific mRNA splicing defects","type":"exact"}],"termid":"FYPO:0003244"}


id: MONDO:0009452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare and severe congenital multisystem disorder characterized by the principal features of agenesis of the corpus callosum, cataracts, oculocutaneous hypopigmentation, cardiomyopathy and combined immunodeficiency.","definition_xrefs":["Orphanet:1493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"Vici syndrome","secondary_identifiers":["SCTID:719824001","UMLS:C1855772","GARD:448","NCIT:C138174","DOID:0060356","MEDGEN:340962","MESH:C535566","OMIM:242840"],"synonyms":[{"name":"Dionisi Vici Sabetta Gambarara syndrome","type":"related"},{"name":"Dionisi-Vici-Sabetta-Gambarara syndrome","type":"exact"},{"name":"VICIS","type":"related"},{"name":"Vici syndrome","type":"exact"},{"name":"absent corpus callosum cataract immunodeficiency","type":"related"},{"name":"absent corpus callosum-cataract-immunodeficiency syndrome","type":"exact"},{"name":"corpus callosum agenesis-cataract-immunodeficiency syndrome","type":"exact"},{"name":"immunodeficiency with cleft Lip/palate, cataract, hypopigmentation, and absent corpus callosum","type":"related"},{"name":"immunodeficiency with cleft lip/palate, cataract, hypopigmentation and absent corpus callosum","type":"related"},{"name":"immunodeficiency with cleft lip/palate, cataract, hypopigmentation, and absent corpus callosum","type":"exact"}],"termid":"MONDO:0009452","xrefs":{"Monarch":{"xref_id":"0009452"}}}


id: MONDO:0017774
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  {"annotated_genes":["SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009528"}]},"cv_name":"mondo","definition":"A group of lipoprotein metabolism disorders that are characterized by permanently low levels (below the 5th percentile) of apolipoprotein B and LDL cholesterol.","definition_xrefs":["Orphanet:31154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypolipoproteinemia","termid":"MONDO:0001822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hypobetalipoproteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6978","DOID:1390","icd11.foundation:1934975006","UMLS:C0020597","SCTID:190786004","MESH:D006995","GARD:18802"],"synonyms":[{"name":"hypo-beta-lipoproteinemia","type":"exact"}],"termid":"MONDO:0017774","terms_by_termid":{"MONDO:0009528":null},"xrefs":{"Monarch":{"xref_id":"0017774"}}}


id: PBO:0017748
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta nucleotide misincorporation rate 4.5-5.3x10^-4","termid":"PBO:0017748"}


id: GO:0050184
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z)-octadecenoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acyl-lipid omega-6 desaturase (cytochrome b5) activity","secondary_identifiers":["MetaCyc:RXN-9669","GO:0102871","GO:0102855","GO:0102857","EC:1.14.19.22","KEGG_REACTION:R03475","GO:0102860","GO:0102861"],"synonyms":[{"name":"1-16:0-2-18:1-phosphatidylcholine desaturase activity","type":"narrow"},{"name":"1-18:1-2-18:2-phosphatidylcholine desaturase activity","type":"narrow"},{"name":"1-18:1-2-18:2-phosphatidylcholine synthase activity","type":"narrow"},{"name":"1-18:1-2-18:3-phosphatidylcholinedesaturase activity","type":"narrow"},{"name":"1-18:2-2-18:1-phosphatidylcholine desaturase activity (SN2-18:2 forming)","type":"narrow"},{"name":"1-acyl-2-oleoyl-sn-glycero-3-phosphocholine:NAD+ delta12-oxidoreductase activity","type":"related"},{"name":"linoleate synthase activity","type":"related"},{"name":"oleate desaturase activity","type":"related"},{"name":"oleoyl-CoA desaturase activity","type":"related"},{"name":"oleoylphosphatidylcholine desaturase activity","type":"related"},{"name":"phosphatidylcholine desaturase activity","type":"related"}],"termid":"GO:0050184"}


id: FYPO:0004268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of septum disassembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum disassembly","termid":"FYPO:0000132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased septum disassembly","synonyms":[{"name":"decreased septum disassembly during mitotic cell cycle","type":"related"},{"name":"decreased septum disassembly during vegetative growth","type":"exact"},{"name":"reduced septum disassembly","type":"exact"}],"termid":"FYPO:0004268"}


id: PBO:0116774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste receptor cell gene 1, pseudogene","termid":"PBO:0116774"}


id: PBO:0058036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4257","termid":"PBO:0058036"}


id: MONDO:0005164
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal fibroblastic neoplasm affecting the soft tissue and bone.","definition_xrefs":["NCIT:C3043"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone sarcoma","termid":"MONDO:0021054"},{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibrosarcoma","secondary_identifiers":["ONCOTREE:FIBS","HP:0100244","DOID:3355","EFO:0002087","GARD:2327","ICD9:171.9","ICDO:8810/3","MedDRA:10016632","MEDGEN:5178","Orphanet:2030","UMLS:C0016057","NANDO:2200060","MESH:D005354","SCTID:443250000"],"synonyms":[{"name":"fibrocytic tumor","type":"broad"},{"name":"fibrocytic tumour","type":"broad"},{"name":"fibrosarcoma","type":"exact"},{"name":"fibrosarcoma (disease)","type":"exact"},{"name":"fibrosarcoma (excluding infantile fibrosarcoma)","type":"exact"},{"name":"fibrosarcoma - not infantile","type":"exact"},{"name":"fibrosarcoma of soft tissue","type":"exact"},{"name":"fibrosarcoma, malignant","type":"exact"},{"name":"fibrous tissue neoplasm","type":"exact"},{"name":"malignant fibromatous neoplasm","type":"exact"}],"termid":"MONDO:0005164","xrefs":{"Monarch":{"xref_id":"0005164"}}}


id: GO:0007445
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of embryonic cells to the imaginal disc founder populations, groups of cells that are committed to contribute to the formation of an imaginal disc compartment.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of imaginal disc primordium","termid":"GO:0007445"}


id: PBO:0068531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 132, pseudogene","termid":"PBO:0068531"}


id: PBO:0036216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_actomyosin_contractile_ring_contraction","termid":"PBO:0036216"}


id: MONDO:0012394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple synostoses syndrome in which the cause of the disease is a mutation in the GDF5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synostoses syndrome","termid":"MONDO:0017923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple synostoses syndrome 2","secondary_identifiers":["MEDGEN:331348","GARD:9916","OMIM:610017","DOID:0081318","MESH:C537380","UMLS:C1832708"],"synonyms":[{"name":"GDF5 multiple synostoses syndrome","type":"exact"},{"name":"SYNS2","type":"related"},{"name":"multiple synostoses syndrome 2","type":"exact"},{"name":"multiple synostoses syndrome caused by mutation in GDF5","type":"exact"},{"name":"multiple synostoses syndrome type 2","type":"exact"}],"termid":"MONDO:0012394","xrefs":{"Monarch":{"xref_id":"0012394"}}}


id: GO:0007489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of the differentiation of polytenized larval hypodermal cells from abdominal histoblasts. The abdominal histoblasts remain a small cluster of diploid cells among the polytenized larval hypodermal cells.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"histoblast morphogenesis","termid":"GO:0007488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of imaginal histoblast diploidy","termid":"GO:0007489"}


id: PBO:0091863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbh2, domesticated transposable element","termid":"PBO:0091863"}


id: FYPO:0007338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 methylation at centromere during vegetative growth","termid":"FYPO:0007337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K4 trimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K4 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3-K4 trimethylation at centromere during mitotic cell cycle during vegetative growth","type":"related"},{"name":"increased histone H3-K4 trimethylation at centromeric region","type":"exact"},{"name":"increased histone H3K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3K4me3 at centromere","type":"exact"},{"name":"increased histone lysine H3 K4 trimethylation at centromere","type":"exact"}],"termid":"FYPO:0007338"}


id: SO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of insertion where the inserted sequence is a mobile element.","definition_xrefs":["EBI:dvga"],"direct_ancestors":[{"relation_name":"contains","term_name":"mobile_genetic_element","termid":"SO:0001037"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_insertion","synonyms":[{"name":"mobile element insertion","type":"exact"}],"termid":"SO:0001837"}


id: PBO:0045234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 2","termid":"PBO:0045234"}


id: GO:0009168
data:
  {"annotated_genes":["SJAG_02850","SJAG_02364","SJAG_00044","SJAG_00964","SJAG_01070","SJAG_01081","SJAG_01814","SJAG_03355","SJAG_04634","SJAG_06634","SJAG_03140","SJAG_01298","SJAG_01859","SJAG_01661","SJAG_04123","SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78615,76527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[59768,57781,69446,76514,64065,71166,56912,65029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[56904,73612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[62934,74465,59215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[75168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[64394,75169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[75170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate biosynthetic process","termid":"GO:0009127"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-73817"],"synonyms":[{"name":"purine ribonucleoside monophosphate anabolism","type":"exact"},{"name":"purine ribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine ribonucleoside monophosphate formation","type":"exact"},{"name":"purine ribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009168","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null}}


id: FYPO:0004251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is greater than normal. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PMID:20051983","PMID:24806966","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased DNA resection during replication fork processing","synonyms":[{"name":"increased DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"increased DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"increased DNA resectioning during replication fork processing","type":"exact"},{"name":"increased extent of DNA resection during replication fork processing","type":"exact"},{"name":"increased extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0004251"}


id: PBO:0067216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 283, pseudogene","termid":"PBO:0067216"}


id: MONDO:0032841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usher syndrome, type 1M","secondary_identifiers":["OMIM:618632","GARD:16370","MEDGEN:1684669","UMLS:C5231434"],"synonyms":[{"name":"USH1M","type":"related"},{"name":"USHER SYNDROME, TYPE 1M","type":"related"}],"termid":"MONDO:0032841","xrefs":{"Monarch":{"xref_id":"0032841"}}}


id: GO:1901246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"}


id: MONDO:0100384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(11;19)(q23;p13.1). (A cytogenetic abnormality that refers to the translocation of the long arm (q23) of chromosome 11 and the short arm (p13.1) of chromosome 19. It is associated with the development of acute myeloid leukemia with variant MLL translocations and topoisomerase II inhibitor-related acute myeloid leukemia.)","definition_xrefs":["NCIT:C36371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(11;19)(q23;p13.1)","synonyms":[{"name":"AML, t(11;19)(q23;p13.1)","type":"exact"}],"termid":"MONDO:0100384","xrefs":{"Monarch":{"xref_id":"0100384"}}}


id: PBO:0059483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase A","termid":"PBO:0059483"}


id: MOD:00800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and a one-vanadium seven-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide.","definition_xrefs":["RESID:AA0393","PubMed:2345152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide","synonyms":[{"name":"CysHis-[V7Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-vanadium cofactor","type":"exact"}],"termid":"MOD:00800"}


id: PBO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Avt3","termid":"PBO:0001255"}


id: MONDO:0958278
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86872],"is_not":false,"summary":null,"term":"MONDO:0958278"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and characteristic brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620746","UMLS:C5935589","Orphanet:664430","MEDGEN:1855201"],"termid":"MONDO:0958278","terms_by_termid":{"MONDO:0958278":null},"xrefs":{"Monarch":{"xref_id":"0958278"}}}


id: GO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The RNA metabolic process that joins two exons, each of which has free ends that were generated by endonucleolytic cleavages, by a ligation reaction.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"},{"relation_name":"part_of","term_name":"RNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA exon ligation","termid":"GO:0000378"}


id: PBO:0064836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 11 pseudogene 2","termid":"PBO:0064836"}


id: PBO:0042137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 1","termid":"PBO:0042137"}


id: PATO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001012 relative intensity value (obsolete PATO:0001012)","termid":"PATO:0001012"}


id: GO:0072423
data:
  {"annotated_genes":["SJAG_04183","SJAG_03048","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[94305,102183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:0072423","terms_by_termid":{"GO:0072429":null,"GO:0072435":null}}


id: PBO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi1 (predicted)","termid":"PBO:0002312"}


id: PR:O74776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial ribosome-associated GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome-associated GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.04c","secondary_identifiers":["UniProtKB:O74776"],"synonyms":[{"name":"SPBC25B2.04c","type":"related"},{"name":"Spom972h-MTG1","type":"exact"}],"termid":"PR:O74776"}


id: MONDO:0011369
data:
  {"annotated_genes":["SJAG_02432","SJAG_01072","SJAG_04785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86259,86260,86261],"is_not":false,"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","definition":"Any familial hypercholesterolemia in which the cause of the disease is a mutation in the PCSK9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypercholesterolemia, autosomal dominant, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:603776","MEDGEN:355007","UMLS:C1863551","MESH:C566337"],"synonyms":[{"name":"Fh3","type":"related"},{"name":"HCHOLA3","type":"related"},{"name":"PCSK9 familial hypercholesterolemia","type":"exact"},{"name":"familial hypercholesterolemia caused by mutation in PCSK9","type":"exact"},{"name":"hypercholesterolemia, autosomal dominant, 3","type":"exact"},{"name":"hypercholesterolemia, autosomal dominant, type 3","type":"exact"},{"name":"hypercholesterolemia, familial, 3","type":"exact"},{"name":"low density lipoprotein cholesterol level QTL 1","type":"exact"},{"name":"low density lipoprotein cholesterol level quantitative trait locus 1","type":"related"}],"termid":"MONDO:0011369","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0011369"}}}


id: PR:Q09920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fio1 gene.","definition_xrefs":["UniProtKB:Q09920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron transport multicopper oxidase fio1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.08","synonyms":[{"name":"Spom972h-fio1","type":"exact"}],"termid":"PR:Q09920"}


id: GO:0015649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 2-keto-3-deoxygluconate(out) + H+(out) = 2-keto-3-deoxygluconate(in) + H+(in).","definition_xrefs":["TC:2.A.10.1.1","RHEA:29943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"2-keto-3-deoxygluconate:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-113"],"synonyms":[{"name":"2-keto-3-deoxygluconate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015649"}


id: GO:0061855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuroblast migration.","definition_xrefs":["PMID:23149556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of neuroblast migration","termid":"GO:0061853"},{"relation_name":"negatively_regulates","term_name":"neuroblast migration","termid":"GO:0097402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroblast migration","termid":"GO:0061855"}


id: PBO:0043766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX16","termid":"PBO:0043766"}


id: PBO:0079648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 S pseudogene 1","termid":"PBO:0079648"}


id: GO:0015141
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of succinate, the dianion of ethane dicarboxylic acid, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"succinate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"}],"termid":"GO:0015141","terms_by_termid":{"GO:0097434":null}}


id: GO:0061090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sequestering of zinc ion (obsolete GO:0061090)","termid":"GO:0061090"}


id: PBO:0027675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_metaphase_with_abnormal_spindle","termid":"PBO:0027675"}


id: PR:O14104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys12 gene.","definition_xrefs":["UniProtKB:O14104","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoisocitrate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.04","synonyms":[{"name":"HICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys12","type":"exact"}],"termid":"PR:O14104"}


id: PBO:0042822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 1 pseudogene 2","termid":"PBO:0042822"}


id: FYPO:0002669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-glutamate-N-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal peptide-glutamate-N-acetyltransferase activity","termid":"FYPO:0002669"}


id: PBO:0048945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOSR2 divergent transcript","termid":"PBO:0048945"}


id: PBO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_division_of","termid":"PBO:0012530"}


id: PBO:0061897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 3","termid":"PBO:0061897"}


id: MONDO:1011889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial episodic spinocerebellar ataxia, non-human animal","secondary_identifiers":["OMIA:001723"],"termid":"MONDO:1011889","xrefs":{"Monarch":{"xref_id":"1011889"}}}


id: PBO:0087325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Soluble GTPase with a role in regulation of membrane traffic; regulates potassium influx; role in membrane organization at trans-Golgi network; required for delivery of Atg9p to the phagophore assembly site during autophagy under high temperature stress; required with Ypt6p for starvation-induced autophagy; required for the CVT pathway under non-starvation conditions; G protein of the Ras superfamily, similar to ADP-ribosylation factor","termid":"PBO:0087325"}


id: GO:1903702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an esophagus over time, from its formation to the mature structure.","definition_xrefs":["ISBN:0-683-40008-8","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"esophagus development","synonyms":[{"name":"esophageal development","type":"exact"},{"name":"gullet development","type":"exact"},{"name":"oesophagus development","type":"exact"}],"termid":"GO:1903702"}


id: SO:1001197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that has the quality dicistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"dicistronic","termid":"SO:0000879"},{"relation_name":"is_a","term_name":"dicistronic_transcript","termid":"SO:0000079"},{"relation_name":"is_a","term_name":"polycistronic_primary_transcript","termid":"SO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic_primary_transcript","synonyms":[{"name":"dicistronic primary transcript","type":"exact"}],"termid":"SO:1001197"}


id: MONDO:0009877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laron syndrome is a congenital disorder characterized by marked short stature associated with normal or high serum growth hormone (GH) and low serum insulin-like growth factor-1 (IGF-I) levels which fail to rise after exogenous GH administration.","definition_xrefs":["Orphanet:633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Laron syndrome","secondary_identifiers":["NCIT:C130994","MEDGEN:78776","SCTID:38196001","OMIM:262500","UMLS:C0271568","GARD:6859","DOID:9521","MESH:D046150","NORD:1209"],"synonyms":[{"name":"GH receptor deficiency","type":"exact"},{"name":"Growth Hormone Insensitivity","type":"exact"},{"name":"Growth hormone receptor deficiency","type":"exact"},{"name":"Laron dwarfism","type":"related"},{"name":"Laron syndrome","type":"exact"},{"name":"Laron type pituitary dwarfism I","type":"related"},{"name":"Laron-type dwarfism","type":"exact"},{"name":"Laron-type isolated somatotropin defect","type":"exact"},{"name":"complete growth hormone insensitivity","type":"exact"},{"name":"growth hormone insensitivity syndrome","type":"related"},{"name":"pituitary dwarfism 2","type":"related"},{"name":"pituitary dwarfism II","type":"related"},{"name":"primary GH insensitivity","type":"exact"},{"name":"primary GH resistance","type":"exact"},{"name":"primary growth hormone insensitivity","type":"exact"},{"name":"primary growth hormone resistance","type":"exact"},{"name":"short stature due to growth hormone resistance","type":"exact"}],"termid":"MONDO:0009877","xrefs":{"Monarch":{"xref_id":"0009877"}}}


id: PBO:0087786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfiredoxin; contributes to oxidative stress resistance by reducing cysteine-sulfinic acid groups in the peroxiredoxin Tsa1p, which is formed upon exposure to oxidants; conserved in higher eukaryotes; protein abundance increases in response to DNA replication stress","termid":"PBO:0087786"}


id: GO:0017193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal glycine of proteins to form the derivative N-acetylglycine.","definition_xrefs":["RESID:AA0046"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-glycine acetylation (obsolete GO:0017193)","termid":"GO:0017193"}


id: MONDO:0032630
data:
  {"annotated_genes":["SJAG_01820"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86006],"is_not":false,"summary":null,"term":"MONDO:0032630"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 26","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648283","OMIM:618247","UMLS:C4748809","DOID:0112086"],"synonyms":[{"name":"MC1DN26","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 26","type":"related"}],"termid":"MONDO:0032630","terms_by_termid":{"MONDO:0032630":null},"xrefs":{"Monarch":{"xref_id":"0032630"}}}


id: PBO:0058841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8071-1","termid":"PBO:0058841"}


id: PBO:0018262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho4 (predicted)","termid":"PBO:0018262"}


id: GO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in kidney development","termid":"GO:0072111"}


id: MOD:01174
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(15-deoxy-Delta12,14-prostaglandin J2-9-yl)-L-cysteine.","definition_xrefs":["PubMed:11466314","PubMed:12684535","ChEBI:27485","RESID:AA0426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:00905","MOD:01155"],"is_obsolete":false,"name":"S-(15-deoxy-Delta12,14-prostaglandin J2-9-yl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(5Z,9Xi,12E,14Z)-1-hydroxy-1,11-oxoprosta-5,12,14-trien-9-yl]sulfanyl)propanoic acid","type":"exact"},{"name":"(5Z,9Xi,12E,14Z)-9-([(2R)-2-amino-3-carboxyethyl]sulfanyl)-11-oxoprosta-5,12,14-trien-1-oic acid","type":"exact"},{"name":"LIPID S-(15-deoxy-Delta12,14-prostaglandin J2-9-yl)cysteine","type":"exact"},{"name":"PG-J2Cys","type":"exact"},{"name":"S-(15-deoxy-Delta12,14-prostaglandin J2-9-yl)-L-cysteine","type":"exact"}],"termid":"MOD:01174"}


id: GO:1990529
data:
  {"annotated_genes":["SJAG_03801","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77253,115942],"is_not":false,"summary":null,"term":"GO:1990529"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transfer of the four mannoses in the GPI-anchor precursor. In yeast S. cerevisiae this complex consists of Pbn1p and Gpi14p and in rat this complex consists of PIG-X and PIG-M.","definition_xrefs":["GOC:dph","GOC:rb","PMID:15635094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03115":null,"SJAG_03801":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-mannosyltransferase I complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I complex","type":"related"}],"termid":"GO:1990529","terms_by_termid":{"GO:1990529":null}}


id: PBO:0043539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 7","termid":"PBO:0043539"}


id: MONDO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cholera (obsolete MONDO:0002024)","termid":"MONDO:0002024","xrefs":{"Monarch":{"xref_id":"0002024"}}}


id: PBO:0065906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabaptin, RAB GTPase binding effector protein 2","termid":"PBO:0065906"}


id: GO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a virus component and mediating entry of the virus into the cell.","definition_xrefs":["GOC:dph","UniProtKB-KW:KW-1183","PMID:7621403","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exogenous protein binding","termid":"GO:0140272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"virus receptor activity","synonyms":[{"name":"viral receptor activity","type":"exact"}],"termid":"GO:0001618"}


id: GO:1900076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"}


id: PBO:0035936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035936"}


id: MOD:01871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an S-carboxamidomethyl-L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid with the loss of ammonia.","definition_xrefs":["DeltaMass:336","Unimod:26","PubMed:12643538"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","termid":"MOD:00419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cyclized N-terminal S-carboxamidomethyl-L-cysteine","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"related"}],"termid":"MOD:01871"}


id: GO:0141071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts a MAPK signal transduction pathway in the host organism by initiating, promoting, or enhancing its activation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24043761","PMID:25675415","PMID:28166272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host MAPK cascade","termid":"GO:0052080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host MAPK cascade","synonyms":[{"name":"activation by symbiont of host MAPK signal transduction pathway","type":"narrow"},{"name":"induction by symbiont of host MAP kinase signal transduction pathway","type":"exact"},{"name":"induction of host MAPK kinase signaling pathway","type":"exact"},{"name":"stimulation by symbiont of host MAPK signal transduction pathway","type":"narrow"},{"name":"symbiont-mediated activation of host MAPK signal transduction pathway","type":"exact"}],"termid":"GO:0141071"}


id: PBO:0082222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex; ubiquitin-binding adaptor involved in down-regulation of general amino acid transporter Gap1p upon shift to preferred nitrogen source; involved in lactate transporter Jen1p endocytosis; BUL1 has a paralog, BUL2, that arose from the whole genome duplication","termid":"PBO:0082222"}


id: MOD:01979
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoglutamyl)-L-threonine, using free L-glutamine and releasing ammonia, or using a peptidyl L-glutamine and releasing ammonia.","definition_xrefs":["PubMed:8706862","RESID:AA0536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-threonine","synonyms":[{"name":"(2S)-2-amino-5-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-5-oxopentanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-4-amino-4-carboxybutanoyl]oxy)-propanoic acid","type":"exact"},{"name":"5-(threon-O3-yl)glutamate","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)threonine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-threonine","type":"exact"},{"name":"O3-(isoglutamyl)threonine","type":"exact"}],"termid":"MOD:01979"}


id: PBO:0078523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 14","termid":"PBO:0078523"}


id: MONDO:1030002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental disorder affecting the growth and development of the proximal end of the femur (thigh bone) near the hip joint characterized by avascular necrosis of the femoral head, cystic changes of the femoral head, and/or sclerosis of the femoral head. It is a relatively milder form of the other skeletal disorders associated with COL2A1.","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplasia of the proximal femoral epiphyses","secondary_identifiers":["MEDGEN:481394","UMLS:C3279764"],"termid":"MONDO:1030002","xrefs":{"Monarch":{"xref_id":"1030002"}}}


id: PBO:0038530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 4, N-acyl phospholipase B","termid":"PBO:0038530"}


id: FYPO:0007807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is decreased.","definition_xrefs":["PomBase:mah","PMID:33836577","GO:0140656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased endodeoxyribonuclease activator activity","termid":"FYPO:0007807"}


id: MONDO:0021334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders characterized by abnormal proliferation of primary cells of the immune system or by excessive production of immunoglobulins.","definition_xrefs":["MESH:D007160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunoproliferative disorder","secondary_identifiers":["SCTID:127071007","UMLS:C0021070","ICD9:203.80","MEDGEN:7038"],"synonyms":[{"name":"Disorder, Immunoproliferative","type":"related"},{"name":"Disorders, Immunoproliferative","type":"related"},{"name":"Immunoproliferative Disorder","type":"related"},{"name":"Immunoproliferative Disorders","type":"related"},{"name":"Immunoproliferative disease","type":"related"},{"name":"Immunoproliferative disorder","type":"related"},{"name":"immunoproliferative disorder","type":"exact"}],"termid":"MONDO:0021334","xrefs":{"Monarch":{"xref_id":"0021334"}}}


id: PR:Q9Y7P8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.04c gene.","definition_xrefs":["UniProtKB:Q9Y7P8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C191.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.04c","synonyms":[{"name":"Spom972h-SPCC191.04c","type":"exact"}],"termid":"PR:Q9Y7P8"}


id: MONDO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the upper lip.","direct_ancestors":[{"relation_name":"is_a","term_name":"lip cancer","termid":"MONDO:0006834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"upper lip cancer","secondary_identifiers":["ICD9:140.3","DOID:8630","ICD9:140.0"],"synonyms":[{"name":"cancer of upper lip","type":"exact"},{"name":"malignant neoplasm of upper lip","type":"exact"},{"name":"malignant upper lip neoplasm","type":"exact"},{"name":"upper lip cancer","type":"exact"}],"termid":"MONDO:0004621","xrefs":{"Monarch":{"xref_id":"0004621"}}}


id: FYPO:0002242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable tapered vegetative cell","termid":"FYPO:0002111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable elongated tapered vegetative cell","synonyms":[{"name":"inviable elongated bottle-shaped vegetative cell","type":"exact"},{"name":"inviable elongated bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated bottle/skittle vegetative cell","type":"exact"},{"name":"inviable elongated skittle-shaped vegetative cell","type":"exact"},{"name":"inviable elongated tapered cell during vegetative growth","type":"exact"},{"name":"inviable long tapered vegetative cell","type":"exact"},{"name":"lethal; elongated tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002242"}


id: GO:0097541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the axoneme consisting of a highly electron-dense region at the distal end of the ciliary transition zone within the axonemal lumen at which the axonemal central pair of microtubules is connected to the rest of the axonemal structure.","definition_xrefs":["GOC:cilia","PMID:4554367","PMID:23352055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal basal plate","synonyms":[{"name":"axoneme basal plate","type":"exact"},{"name":"basal plate","type":"broad"}],"termid":"GO:0097541"}


id: GO:1900020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein kinase C activity.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"regulation of protein kinase C activity","termid":"GO:1900019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase C activity","synonyms":[{"name":"positive regulation of PKC","type":"related"},{"name":"positive regulation of PKC activity","type":"exact"},{"name":"up regulation of PKC","type":"related"},{"name":"up regulation of PKC activity","type":"exact"}],"termid":"GO:1900020"}


id: PBO:0032728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_MCB_promoter","termid":"PBO:0032728"}


id: PBO:0086535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; partially overlaps dubious ORF YLR123C","termid":"PBO:0086535"}


id: PBO:0083888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of nuclear pore complex (NPC); also part of the NPC nuclear basket; contributes directly to nucleocytoplasmic transport; involved in regulation of transcription and mitosis; induces membrane tubulation, which may contribute to nuclear pore assembly; NUP53 has a paralog, ASM4, that arose from the whole genome duplication","termid":"PBO:0083888"}


id: PBO:0074380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 6","termid":"PBO:0074380"}


id: GO:0032795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heterotrimeric G-protein.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heterotrimeric G-protein binding","termid":"GO:0032795"}


id: PBO:0064026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 60","termid":"PBO:0064026"}


id: MONDO:0009532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome caused by deletion of genetic material in the short arm of chromosome 17. It is characterized by an abnormally smooth brain with fewer folds and grooves. It results in intellectual disability, developmental delay, seizures, spasticity, hypotonia, and feeding difficulties. Affected individuals have distinctive facial features that include a prominent forehead, midface hypoplasia, small, upturned nose, low-set ears, small jaw, and thick upper lip.","definition_xrefs":["NCIT:C124852"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"classic lissencephaly","termid":"MONDO:0015146"},{"relation_name":"is_a","term_name":"chromosome 17p deletion","termid":"MONDO:0022754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Miller-Dieker lissencephaly syndrome","secondary_identifiers":["SCTID:253148005","GARD:3669","Orphanet:531","UMLS:C0265219","DECIPHER:21","ICD9:758.33","NANDO:1201083","OMIM:247200","MedDRA:10068361","DOID:0060469","MEDGEN:78538"],"synonyms":[{"name":"MDLS","type":"related"},{"name":"Miller-Dieker lissencephaly syndrome","type":"exact"},{"name":"Miller-Dieker syndrome","type":"exact"},{"name":"Miller-Dieker syndrome chromosome region","type":"related"},{"name":"chromosome 17P13.3 deletion syndrome","type":"related"},{"name":"lissencephaly due to 17p13.3 deletion","type":"exact"},{"name":"monosomy 17p13.3","type":"exact"},{"name":"telomeric deletion 17p","type":"exact"}],"termid":"MONDO:0009532","xrefs":{"Monarch":{"xref_id":"0009532"}}}


id: PBO:0043475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 11","termid":"PBO:0043475"}


id: PBO:0069275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 531, pseudogene","termid":"PBO:0069275"}


id: PBO:0070647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 18","termid":"PBO:0070647"}


id: PR:O43062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4C3.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4C3.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.09","synonyms":[{"name":"Spom972h-SPBC4C3.09","type":"exact"}],"termid":"PR:O43062"}


id: PR:Q9UTF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small EDRK-rich factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF-like protein C1705.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.02","secondary_identifiers":["UniProtKB:Q9UTF0"],"synonyms":[{"name":"Spom972h-SERF1","type":"exact"}],"termid":"PR:Q9UTF0"}


id: MONDO:1010747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in domestic cats in which the cause of the disease is a mutation in the ADAMTS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, domestic cat","termid":"MONDO:1011494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type, ADAMTS2-related, domestic cat","secondary_identifiers":["OMIA:000328-9685"],"synonyms":[{"name":"dEDS","type":"exact"}],"termid":"MONDO:1010747","xrefs":{"Monarch":{"xref_id":"1010747"}}}


id: FYPO:0005243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0002058"],"is_obsolete":false,"name":"increased cell population growth on glutamine nitrogen source","synonyms":[{"name":"increased growth on glutamine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on glutamine nitrogen source","type":"exact"}],"termid":"FYPO:0005243"}


id: GO:0072584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that begins when material is taken up into plasma membrane caveolae, which then pinch off to form endocytic caveolar carriers.","definition_xrefs":["GOC:BHF","PMID:8970738","GOC:mah","PMID:17318224","PMID:18498251","PMID:9234965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"caveolin-mediated endocytosis","synonyms":[{"name":"caveolae-dependent endocytosis","type":"exact"},{"name":"caveolae-mediated endocytosis","type":"exact"},{"name":"caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:0072584"}


id: GO:0051664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which nuclear pores are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear pore localization","secondary_identifiers":["GO:0031081"],"synonyms":[{"name":"establishment and maintenance of nuclear pore localization","type":"exact"},{"name":"nuclear pore distribution","type":"related"},{"name":"nuclear pore localisation","type":"exact"},{"name":"positioning of nuclear pores","type":"related"}],"termid":"GO:0051664"}


id: PBO:0080421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 5","termid":"PBO:0080421"}


id: MONDO:0006676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beriberi is a condition that occurs in people who are deficient in thiamine (vitamin B1). There are two major types of beriberi: wet beriberi which affects the cardiovascular system and dry beriberi which affects the nervous system. People with wet beriberi may experience increased heart rate, shortness of breath, and swelling of the lower legs. Signs and symptoms of dry beriberi include difficulty walking; loss of feeling in the hands and/or feet; paralysis of the lower legs; mental confusion; speech difficulty; pain; and/or vomiting. Beriberi is rare in the United States since many foods are now vitamin enriched; however, alcohol abuse, dialysis and taking high doses of diuretics increases the risk of developing the condition. In most cases,beriberi occurs sporadically in people with no family history of the condition. A rare condition known as genetic beriberi is inherited (passed down through families) and is associated with an inability to absorb thiamine from foods. Treatment generally includes thiamine supplementation, given by injection or taken by mouth.","direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B deficiency","termid":"MONDO:0042976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beriberi","secondary_identifiers":["DOID:13725","ICD9:265.0","UMLS:C0005122","DOID:0070313","NCIT:C34418","MedDRA:10004482","SCTID:36656008","icd11.foundation:632832064","EFO:1000837","MEDGEN:543","MESH:D001602"],"synonyms":[{"name":"Beri Beri","type":"exact"},{"name":"thiamine deficiency","type":"exact"},{"name":"vitamin B1 deficiency","type":"exact"}],"termid":"MONDO:0006676","xrefs":{"Monarch":{"xref_id":"0006676"}}}


id: PBO:0083654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease involved in processing DNA; acts during recombination, repair; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); cleaves branched structures in complex with Slx1p; involved in interstrand cross-link repair, Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during DSBR via single-strand annealing; relative distribution to nuclear foci increases upon DNA replication stress; FANCP-related factor","termid":"PBO:0083654"}


id: PBO:0071999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 1","termid":"PBO:0071999"}


id: FYPO:0000171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which late endosome to vacuole transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal late endosome to vacuole transport","synonyms":[{"name":"abnormal late endosome to vacuole protein transport","type":"narrow"},{"name":"abnormal late endosome to vacuole transport during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome to vacuole transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000171"}


id: MONDO:0005962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis of the bones or joints.","definition_xrefs":["MESH:D014394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal tuberculosis","secondary_identifiers":["SCTID:17653001","MEDGEN:21727","UMLS:C0041324","EFO:0007487","DOID:1639","ICD9:015","ICD9:015.9"],"synonyms":[{"name":"osteoarticular tuberculosis","type":"exact"}],"termid":"MONDO:0005962","xrefs":{"Monarch":{"xref_id":"0005962"}}}


id: GO:0050023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-fuconate = 2-dehydro-3-deoxy-L-fuconate + H2O.","definition_xrefs":["RHEA:22772","EC:4.2.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"L-fuconate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03688","MetaCyc:L-FUCONATE-HYDRATASE-RXN"],"synonyms":[{"name":"L-fuconate hydratase activity","type":"exact"},{"name":"L-fuconate hydro-lyase (2-dehydro-3-deoxy-L-fuconate-forming)","type":"related"},{"name":"L-fuconate hydro-lyase activity","type":"related"}],"termid":"GO:0050023"}


id: PBO:0091824
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by A. thaliana cdc2bAt","termid":"PBO:0091824"}


id: SO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of (R)-GNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"R_GNA","termid":"SO:0001194"},{"relation_name":"is_a","term_name":"GNA_oligo","termid":"SO:0001193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_GNA_oligo","synonyms":[{"name":"(R)-glycerol nucleic acid","type":"exact"},{"name":"(R)-glycol nucleic acid","type":"exact"},{"name":"R GNA oligo","type":"exact"}],"termid":"SO:0001195"}


id: GO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer activity (obsolete GO:0004871)","synonyms":[{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity","type":"narrow"},{"name":"quorum sensing response regulator activity","type":"narrow"},{"name":"quorum sensing signal generator activity","type":"narrow"}],"termid":"GO:0004871"}


id: GO:1990177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing IHF heterodimers (an alpha and a beta chain) bound to DNA. IHF binds to double-stranded DNA in a structure- and sequence-specific manner and bends the DNA into a nucleosome-like structure, the bacterial nucleoid.","definition_xrefs":["GOC:bhm","PMID:17097674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"is_a","term_name":"DNA bending complex","termid":"GO:1990104"},{"relation_name":"part_of","term_name":"bacterial nucleoid","termid":"GO:0043590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IHF-DNA complex","synonyms":[{"name":"IHF complex","type":"exact"},{"name":"IHFa-IHFb-DNA complex","type":"exact"}],"termid":"GO:1990177"}


id: GO:0080119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the formation of ER (endoplasmic reticulum) body. ER body is a compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm long and 0.5 mm wide) and are surrounded with ribosomes. They have been found in Arabidopsis thaliana and related Brassicaceae species.","definition_xrefs":["PMID:18780803","PMID:19147648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ER body organization","synonyms":[{"name":"ER body organisation","type":"exact"},{"name":"ER body organization and biogenesis","type":"related"},{"name":"endoplasmic reticulum body organization","type":"exact"},{"name":"endoplasmic reticulum body organization and biogenesis","type":"related"}],"termid":"GO:0080119"}


id: MONDO:0021783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the throat due to Streptococcus pyogenes.","definition_xrefs":["NCIT:C116003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngitis","termid":"MONDO:0002258"},{"relation_name":"is_a","term_name":"streptococcal infection","termid":"MONDO:0021680"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcal sore throat","secondary_identifiers":["MEDGEN:508129","SCTID:43878008","ICD9:034.0","UMLS:C0036689"],"synonyms":[{"name":"Septic sore throat","type":"related"},{"name":"Strep throat","type":"related"},{"name":"Strept throat","type":"related"},{"name":"Streptococcal Pharyngitis","type":"related"},{"name":"Streptococcal angina","type":"related"},{"name":"Streptococcal pharyngitis","type":"related"},{"name":"Streptococcal sore throat","type":"related"},{"name":"strep throat","type":"exact"},{"name":"streptococcal pharyngitis","type":"exact"}],"termid":"MONDO:0021783","xrefs":{"Monarch":{"xref_id":"0021783"}}}


id: PBO:0047447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIc (gene/pseudogene)","termid":"PBO:0047447"}


id: PBO:0078694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (AAG) 5-1","termid":"PBO:0078694"}


id: FYPO:0002959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during one or both meiotic nuclear divisions. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during meiosis","synonyms":[{"name":"decreased RNA accumulation during meiosis","type":"related"},{"name":"decreased RNA level during meiotic nuclear division","type":"exact"},{"name":"decreased transcript level during meiosis","type":"exact"},{"name":"reduced RNA level during meiosis","type":"exact"}],"termid":"FYPO:0002959"}


id: GO:0031893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasopressin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"vasopressin receptor binding","synonyms":[{"name":"vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031893"}


id: GO:0016742
data:
  {"annotated_genes":["SJAG_01766","SJAG_02901","SJAG_01368","SJAG_03641","SJAG_05200","SJAG_03914","SJAG_01814","SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003864"},{"annotations":[57494,112831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004047"},{"annotations":[71667,73090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004372"},{"annotations":[77981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004479"},{"annotations":[69443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004643"},{"annotations":[71164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004644"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).","definition_xrefs":["EC:2.1.2.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring one-carbon groups","termid":"GO:0016741"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01368":null,"SJAG_01766":null,"SJAG_01814":null,"SJAG_02901":null,"SJAG_03641":null,"SJAG_03914":null,"SJAG_04681":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"hydroxymethyl-, formyl- and related transferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016742","terms_by_termid":{"GO:0003864":null,"GO:0004047":null,"GO:0004372":null,"GO:0004479":null,"GO:0004643":null,"GO:0004644":null}}


id: GO:0160224
data:
  {"annotated_genes":["SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109084],"is_not":false,"summary":null,"term":"GO:0160224"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5-methoxy-2-methyl-3-(all-trans-polyprenyl)benzoquinone + NADH + O2 = a 3-demethylubiquinone + NAD+ + H2O.","definition_xrefs":["PMID:23445365","PMID:38425362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-demethoxyubiquinone 3-hydroxylase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5-methoxy-2-methyl-3-(all-trans-polyprenyl)benzoquinone,NADH:oxygen oxidoreductase (5-hydroxylating) activity","type":"exact"}],"termid":"GO:0160224","terms_by_termid":{"GO:0160224":null}}


id: PBO:0035968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_cable_assembly","termid":"PBO:0035968"}


id: PBO:0068580
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 31, pseudogene","termid":"PBO:0068580"}


id: GO:0043038
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  {"annotated_genes":["SJAG_00653","SJAG_04856","SJAG_00420","SJAG_03071","SJAG_00103","SJAG_04094","SJAG_03585","SJAG_01197","SJAG_01577","SJAG_04738","SJAG_02015","SJAG_02236","SJAG_04762","SJAG_04409","SJAG_02721","SJAG_00488","SJAG_01797","SJAG_03626","SJAG_02263","SJAG_01259","SJAG_01522","SJAG_00443","SJAG_03545","SJAG_16456","SJAG_01159","SJAG_02615","SJAG_02428","SJAG_04840","SJAG_04473","SJAG_03277","SJAG_02977","SJAG_04482","SJAG_02517","SJAG_01352","SJAG_02206","SJAG_05560","SJAG_04031","SJAG_01235","SJAG_04285","SJAG_00243"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043041"},{"annotations":[104870,102057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006421"},{"annotations":[76477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006422"},{"annotations":[72132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006423"},{"annotations":[93478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990762"},{"annotations":[104461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061475"},{"annotations":[79822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006425"},{"annotations":[71448,74813,118208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070681"},{"annotations":[72504,69932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006424"},{"annotations":[78563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006427"},{"annotations":[74953,71261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006428"},{"annotations":[75555,77723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006429"},{"annotations":[73211,71455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006430"},{"annotations":[77905,69022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006431"},{"annotations":[63870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"},{"annotations":[107017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"},{"annotations":[117865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"},{"annotations":[72568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"},{"annotations":[72674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"},{"annotations":[70996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"},{"annotations":[97444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"},{"annotations":[78656,77173,78326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006432"},{"annotations":[76987,70150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006433"},{"annotations":[76542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006434"},{"annotations":[70339,73279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006435"},{"annotations":[95847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006418"},{"annotations":[69723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006436"},{"annotations":[78487,57824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006437"}]},"cv_name":"biological_process","definition":"The modification of an amino acid to an active form, for incorporation into a peptide, protein or other macromolecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic 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id: MONDO:0000107
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013845"},{"annotations":[86115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957544"}]},"cv_name":"mondo","definition":"Auriculo-condylar syndrome (ACS) presents with bilateral external ear malformations ('question mark' ears), mandibular condyle hypoplasia, microstomia, micrognathia, microglossia and facial asymmetry. Additional manifestations include hypotonia, ptosis, cleft palate, puffy cheeks, developmental delay, impaired hearing and respiratory distress.","definition_xrefs":["Orphanet:137888"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"craniofacial microsomia","termid":"MONDO:0015397"},{"relation_name":"is_a","term_name":"ear malformation","termid":"MONDO:0007500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"auriculocondylar syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9798","MEDGEN:355953","MESH:C538270","OMIMPS:602483","UMLS:C1865295","SCTID:702443003"],"synonyms":[{"name":"auriculo-condylar syndrome","type":"exact"},{"name":"dysgnathia complex","type":"related"},{"name":"ears prominent and constricted","type":"related"},{"name":"question mark ear","type":"related"},{"name":"question mark ear syndrome","type":"exact"},{"name":"question-mark ear syndrome","type":"related"}],"termid":"MONDO:0000107","terms_by_termid":{"MONDO:0013845":null,"MONDO:0957544":null},"xrefs":{"Monarch":{"xref_id":"0000107"}}}


id: GO:0043158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process by which a cell becomes a heterocyst, a cell that carries out nitrogen fixation. This process involves changes to the cell wall, expression of nitrogenase and other proteins involved in nitrogen fixation, and degradation of photosystem II, which produces oxygen. This process is known to occur in some cyanobacteria.","definition_xrefs":["PMID:35744626","PMID:11121783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heterocyst development","synonyms":[{"name":"heterocyst cell differentiation","type":"related"},{"name":"heterocyst differentiation","type":"related"},{"name":"heterocyst formation","type":"exact"}],"termid":"GO:0043158"}


id: GO:0034675
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha6 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alpha6-beta1 complex","synonyms":[{"name":"ITGA6-ITGB1 complex","type":"narrow"},{"name":"VLA-6 complex","type":"exact"},{"name":"alpha6-beta1 integrin complex","type":"exact"}],"termid":"GO:0034675"}


id: PBO:0027747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_regulation_of_mitotic_cell_cycle_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027747"}


id: GO:0070895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transposon integration, a process in which a transposable element is incorporated into another DNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposon integration (obsolete GO:0070895)","synonyms":[{"name":"down regulation of transposon integration","type":"exact"},{"name":"down-regulation of transposon integration","type":"exact"},{"name":"downregulation of transposon integration","type":"exact"},{"name":"inhibition of transposon integration","type":"narrow"}],"termid":"GO:0070895"}


id: GO:0060698
data:
  {"annotated_genes":["SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88581],"is_not":false,"summary":null,"term":"GO:0060698"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of endoribonuclease.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease inhibitor activity","termid":"GO:0008428"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02594":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140678","GO:0030234","GO:0004857"],"is_obsolete":false,"name":"endoribonuclease inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060698","terms_by_termid":{"GO:0060698":null}}


id: PBO:0063868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class A pseudogene 1","termid":"PBO:0063868"}


id: GO:0019390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside biosynthetic process (obsolete GO:0019390)","synonyms":[{"name":"glucuronide biosynthesis","type":"exact"},{"name":"glucuronide biosynthetic process","type":"exact"},{"name":"glucuronoside anabolism","type":"exact"},{"name":"glucuronoside biosynthesis","type":"exact"},{"name":"glucuronoside formation","type":"exact"},{"name":"glucuronoside synthesis","type":"exact"}],"termid":"GO:0019390"}


id: PBO:0066969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 271","termid":"PBO:0066969"}


id: PBO:0080044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 30","termid":"PBO:0080044"}


id: PBO:0059934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 20","termid":"PBO:0059934"}


id: MONDO:0005348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An irregularly shaped, elevated mark on the skin caused by deposits of excessive amounts of collagen during wound healing. It extends beyond the original boundaries of the wound and may enlarge progressively.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reactive cutaneous fibrous lesion","termid":"MONDO:0006603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keloid","secondary_identifiers":["EFO:0004212","NCIT:C3145","MEDGEN:7197","icd11.foundation:2057714006","ICD9:701.4","SCTID:33659008","UMLS:C0022548","MESH:D007627"],"termid":"MONDO:0005348","xrefs":{"Monarch":{"xref_id":"0005348"}}}


id: PBO:0063379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDC antisense RNA 1","termid":"PBO:0063379"}


id: PBO:0068321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19B pseudogene Y-linked","termid":"PBO:0068321"}


id: SO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ss_RNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as single stranded RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ss_RNA_viral_sequence","synonyms":[{"name":"single strand RNA virus","type":"exact"},{"name":"ss RNA viral sequence","type":"exact"}],"termid":"SO:0001199"}


id: GO:0005950
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  {"annotated_genes":["SJAG_01455","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103286,114464],"is_not":false,"summary":null,"term":"GO:0005950"}]},"cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two components I and two components II. Catalyzes the formation of anthranilate, pyruvate and L-glutamate from chorismate and L-glutamine.","definition_xrefs":["PMID:4886290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"anthranilate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ANTHRANSYN-CPLX"],"termid":"GO:0005950","terms_by_termid":{"GO:0005950":null}}


id: PBO:0052075
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1","termid":"PBO:0052075"}


id: GO:2000936
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellotriose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"regulates","term_name":"cellotriose catabolic process","termid":"GO:2000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellotriose catabolic process","synonyms":[{"name":"regulation of cellotriose catabolism","type":"exact"}],"termid":"GO:2000936"}


id: PBO:0034054
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-continuous_with","termid":"PBO:0034054"}


id: GO:0071363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"},{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to growth factor stimulus","termid":"GO:0071363"}


id: PBO:0078598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 11, Y-linked","termid":"PBO:0078598"}


id: GO:0047963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choloyl-CoA + glycine = CoA + glycocholate.","definition_xrefs":["MetaCyc:GLYCINE-N-CHOLOYLTRANSFERASE-RXN","EC:2.3.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"glycine N-choloyltransferase activity","secondary_identifiers":["RHEA:14001"],"synonyms":[{"name":"BACAT activity","type":"related"},{"name":"BAT activity","type":"related"},{"name":"amino acid N-choloyltransferase activity","type":"related"},{"name":"bile acid-CoA:amino acid N-acyltransferase activity","type":"related"},{"name":"choloyl-CoA:glycine N-choloyltransferase activity","type":"related"},{"name":"cholyl-CoA glycine-taurine N-acyltransferase activity","type":"related"},{"name":"cholyl-CoA:taurine N-acyltransferase activity","type":"related"},{"name":"glycine--taurine N-acyltransferase activity","type":"related"}],"termid":"GO:0047963"}


id: GO:1904837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a beta-catenin-TCF complex.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000079","PMID:18936100","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"beta-catenin-TCF complex assembly","secondary_identifiers":["Reactome:R-HSA-201722"],"synonyms":[{"name":"beta-catenin-TCF complex formation","type":"exact"},{"name":"beta-catenin/LEF complex assembly","type":"narrow"},{"name":"beta-catenin/LEF complex formation","type":"narrow"},{"name":"beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"beta-catenin/T-cell factor complex formation","type":"related"},{"name":"beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904837"}


id: GO:0009667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the inner membrane of a plastid.","definition_xrefs":["GOC:ai","GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plastid inner membrane organization","synonyms":[{"name":"plastid inner membrane organisation","type":"exact"},{"name":"plastid inner membrane organization and biogenesis","type":"related"}],"termid":"GO:0009667"}


id: GO:0004376
data:
  {"annotated_genes":["SJAG_03056","SJAG_00295","SJAG_04770","SJAG_00747","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004378"},{"annotations":[60541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102704"},{"annotations":[76460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004377"},{"annotations":[102830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180041"},{"annotations":[87255,90981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033164"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-D-mannosyl-D-mannose linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_00747":null,"SJAG_03056":null,"SJAG_03115":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycolipid mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162873","Reactome:R-HSA-162821","GO:0004580"],"synonyms":[{"name":"glycolipid mannosyl transferase activity","type":"exact"}],"termid":"GO:0004376","terms_by_termid":{"GO:0004377":null,"GO:0004378":null,"GO:0033164":null,"GO:0102704":null,"GO:0180041":null}}


id: GO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a vacuole, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in vacuole","termid":"GO:0072667"}


id: GO:0030782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (S)-7,8,13,14-tetrahydroprotoberberine = S-adenosyl-L-homocysteine + cis-N-methyl-(S)-7,8,13,14-tetrahydroprotoberberine.","definition_xrefs":["EC:2.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"(S)-tetrahydroprotoberberine N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.122-RXN","RHEA:12805"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-7,8,13,14-tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"},{"name":"tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"}],"termid":"GO:0030782"}


id: GO:0035135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic medial fin morphogenesis","termid":"GO:0035132"},{"relation_name":"is_a","term_name":"anal fin morphogenesis","termid":"GO:0035144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic anal fin morphogenesis","termid":"GO:0035135"}


id: PBO:0055133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2552","termid":"PBO:0055133"}


id: PBO:0059133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 10","termid":"PBO:0059133"}


id: MONDO:1010259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephritis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephritis, non-human animal","secondary_identifiers":["OMIA:000708"],"termid":"MONDO:1010259","xrefs":{"Monarch":{"xref_id":"1010259"}}}


id: FYECO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which guanosine triphosphate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ GTP","synonyms":[{"name":"+ guanosine triphosphate","type":"exact"}],"termid":"FYECO:0000115"}


id: PBO:0069896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1187, pseudogene","termid":"PBO:0069896"}


id: PBO:0052871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRTAP5-1/KRTAP5-2 antisense RNA 1","termid":"PBO:0052871"}


id: MONDO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving the use of nonliving objects (the \\\"fetish\\\").","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetishistic disorder","secondary_identifiers":["DOID:1235","ICD9:302.81","MEDGEN:8827","UMLS:C0015957","NCIT:C94353","MESH:D005329","ICD10CM:F65.0","SCTID:59174009"],"synonyms":[{"name":"fetishism","type":"exact"}],"termid":"MONDO:0001504","xrefs":{"Monarch":{"xref_id":"0001504"}}}


id: GO:1990239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a steroid hormone.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"steroid hormone binding","termid":"GO:1990239"}


id: FYPO:0006699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"decreased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"decreased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"},{"name":"reduced cellular hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0006699"}


id: GO:0034069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + N-acetylaminoglycoside.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside N-acetyltransferase activity","synonyms":[{"name":"kanamycin acetyltransferase activity","type":"narrow"}],"termid":"GO:0034069"}


id: PR:P40995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor scd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.09","synonyms":[{"name":"Spom972h-scd1","type":"exact"}],"termid":"PR:P40995"}


id: MONDO:0009098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrocardia with unusual facies and microphthalmia","secondary_identifiers":["UMLS:C1857298","MEDGEN:346559","MESH:C538269","OMIM:221950"],"synonyms":[{"name":"Aughton syndrome","type":"related"},{"name":"dextrocardia with unusual facies and microphthalmia","type":"exact"},{"name":"dextrocardia, microphthalmia, cleft palate, choreoathetosis and intellectual disability","type":"related"},{"name":"dextrocardia, microphthalmia, cleft palate, choreoathetosis and mental retardation","type":"related"}],"termid":"MONDO:0009098","xrefs":{"Monarch":{"xref_id":"0009098"}}}


id: GO:2001053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process","synonyms":[{"name":"regulation of mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:2001053"}


id: FYPO:0002310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal GMP binding","termid":"FYPO:0002310"}


id: PBO:0081323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 114","termid":"PBO:0081323"}


id: SO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon or insertion sequence. An element that can insert in a variety of DNA sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Transposable_element"],"synonyms":[{"name":"transposable element","type":"exact"},{"name":"transposon","type":"exact"}],"termid":"SO:0000101"}


id: GO:0080034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the formation of an abnormal mass of cells in the host organism, induced by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18836040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host response to induction by symbiont of tumor, nodule or growth in host","termid":"GO:0080034"}


id: PBO:0063335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA antisense RNA 1","termid":"PBO:0063335"}


id: GO:0052142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis within host (obsolete GO:0052142)","termid":"GO:0052142"}


id: PBO:0038629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACKR4 pseudogene 1","termid":"PBO:0038629"}


id: MONDO:0025478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumors most commonly seen on or near the genitalia. They are venereal, most likely transmitted through transplantation of cells by contact. Metastases have been reported. Spontaneous regression may occur.","definition_xrefs":["MESH:D014685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"venereal tumors, veterinary","synonyms":[{"name":"transmissible venereal tumor","type":"related"},{"name":"transmissible venereal tumors","type":"related"},{"name":"transmissible venereal tumour","type":"related"},{"name":"transmissible venereal tumours","type":"related"},{"name":"tumor, transmissible venereal","type":"related"},{"name":"tumor, veterinary venereal","type":"related"},{"name":"tumors, transmissible venereal","type":"related"},{"name":"tumors, veterinary venereal","type":"related"},{"name":"venereal tumor, transmissible","type":"related"},{"name":"venereal tumor, veterinary","type":"related"},{"name":"venereal tumors, transmissible","type":"related"},{"name":"veterinary venereal tumor","type":"related"},{"name":"veterinary venereal tumors","type":"related"},{"name":"veterinary venereal tumour","type":"related"},{"name":"veterinary venereal tumours","type":"related"}],"termid":"MONDO:0025478","xrefs":{"Monarch":{"xref_id":"0025478"}}}


id: PBO:0004936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop16 (predicted)","termid":"PBO:0004936"}


id: MONDO:0024888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm of the female reproductive system arising from mesonephric remnants.","definition_xrefs":["NCIT:C4295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"mesonephric neoplasm","secondary_identifiers":["UMLS:C0334531","ICDO:9110/1","MEDGEN:137779"],"synonyms":[{"name":"Wolffian duct neoplasm","type":"exact"},{"name":"Wolffian duct tumor","type":"exact"},{"name":"Wolffian duct tumour","type":"exact"},{"name":"mesonephric duct neoplasm","type":"exact"},{"name":"mesonephric duct tumor","type":"exact"},{"name":"mesonephric duct tumour","type":"exact"},{"name":"mesonephric neoplasm","type":"exact"},{"name":"mesonephric tumor","type":"exact"},{"name":"mesonephric tumour","type":"exact"},{"name":"mesonephroma","type":"exact"},{"name":"neoplasm of mesonephric duct","type":"exact"},{"name":"tumor of mesonephric duct","type":"exact"},{"name":"tumour of mesonephric duct","type":"exact"}],"termid":"MONDO:0024888","xrefs":{"Monarch":{"xref_id":"0024888"}}}


id: MONDO:1010052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, non-human animal","secondary_identifiers":["OMIA:000279"],"termid":"MONDO:1010052","xrefs":{"Monarch":{"xref_id":"1010052"}}}


id: PBO:0065741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXN antisense RNA 1","termid":"PBO:0065741"}


id: PBO:0064136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 3","termid":"PBO:0064136"}


id: PBO:0057734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1322","termid":"PBO:0057734"}


id: PBO:0057361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ae-1","termid":"PBO:0057361"}


id: PBO:0053338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 205","termid":"PBO:0053338"}


id: FYPO:0005378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle pole body organization is normal (i.e. indistinguishable from wild type). Spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB).","definition_xrefs":["PomBase:mah","GO:0051300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle pole body organization","synonyms":[{"name":"normal SPB organization","type":"exact"},{"name":"normal spindle pole body organisation","type":"exact"}],"termid":"FYPO:0005378"}


id: PBO:0027854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027854"}


id: PBO:0076056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 2","termid":"PBO:0076056"}


id: PBO:0042743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein Q","termid":"PBO:0042743"}


id: PR:O14201
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug86 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 86 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.09c","synonyms":[{"name":"Spom972h-mug86","type":"exact"}],"termid":"PR:O14201"}


id: PBO:0028599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_elongation_from_RNA_polymerase_III_promoter_during_vegetative_growth","termid":"PBO:0028599"}


id: GO:0098629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a trans-Golgi network membrane.","definition_xrefs":["GOC:dos","PMID:23345439","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"trans-Golgi network membrane organization","termid":"GO:0098629"}


id: PBO:0039479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A2, pseudogene","termid":"PBO:0039479"}


id: PBO:0080604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 38","termid":"PBO:0080604"}


id: MONDO:0007985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metatarsus varus, type 1","secondary_identifiers":["OMIM:156520","UMLS:C1834968","MEDGEN:331870","MESH:C563585"],"synonyms":[{"name":"metatarsus varus, type I","type":"related"}],"termid":"MONDO:0007985","xrefs":{"Monarch":{"xref_id":"0007985"}}}


id: PBO:0027613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated,_septated_cell","termid":"PBO:0027613"}


id: PR:O14284
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug63 gene.","definition_xrefs":["UniProtKB:O14284","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation resistance protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.16c","synonyms":[{"name":"Spom972h-mug63","type":"exact"},{"name":"meiotically up-regulated gene 63 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14284"}


id: PBO:0043033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B pseudogene 1","termid":"PBO:0043033"}


id: PR:O94677
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03602","PANTHER:PTHR21506:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.10c","secondary_identifiers":["UniProtKB:O94677"],"synonyms":[{"name":"COG complex subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG6","type":"exact"},{"name":"component of oligomeric Golgi complex 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94677"}


id: MOD:00469
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag heavy d10","synonyms":[{"name":"ESP-Tag heavy d10","type":"related"},{"name":"ESP:2H(10)","type":"related"}],"termid":"MOD:00469"}


