# terms

id: GO:0042532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["PMID:11426647","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"negative regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046426"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"negatively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042527","GO:0042518","GO:0042524","GO:0042530","GO:0042514","GO:0042521","GO:0042512"],"synonyms":[{"name":"down regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"downregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042532"}


id: PBO:0067486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 620, pseudogene","termid":"PBO:0067486"}


id: PBO:0068326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 31","termid":"PBO:0068326"}


id: GO:0016270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 4 O-glycan structure, GlcNAc-beta-(1->6)[GalNAc-beta-(1->3)]-GalNAc.","definition_xrefs":["PMID:10580130","GOC:mah","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete O-glycan processing, core 4 (obsolete GO:0016270)","termid":"GO:0016270"}


id: PBO:0085724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the HOG (high osmolarity glycerol) pathway; negatively regulates Hog1p by recruitment of phosphatase Ptc1p to the Pbs2p-Hog1p complex; interacts with Bck1p and down regulates the cell wall integrity pathway; found in the nucleus and cytoplasm; contains an SH3 domain and a Ptc1p binding domain (PBM)","termid":"PBO:0085724"}


id: MONDO:0700251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 7","secondary_identifiers":["UMLS:C1833538","MEDGEN:371589","DOID:0080400"],"termid":"MONDO:0700251","xrefs":{"Monarch":{"xref_id":"0700251"}}}


id: MONDO:0032739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 36","secondary_identifiers":["UMLS:C5193086","OMIM:618420","DOID:0111921","MEDGEN:1678385"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 36","type":"related"},{"name":"SPGF36","type":"related"}],"termid":"MONDO:0032739","xrefs":{"Monarch":{"xref_id":"0032739"}}}


id: PBO:0088358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease, XP-G family protein Ast1","termid":"PBO:0088358"}


id: GO:0097489
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the multivesicular body internal vesicle.","definition_xrefs":["PMID:21183070","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle lumen","termid":"GO:0031983"},{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"multivesicular body, internal vesicle","termid":"GO:0097487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"multivesicular body, internal vesicle lumen","termid":"GO:0097489"}


id: GO:0060973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the progression of the heart over time, from its initial formation, to the mature organ.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart development","termid":"GO:0060973"}


id: GO:0002643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"regulates","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction","termid":"GO:0002643"}


id: PBO:0070128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 42 pseudogene","termid":"PBO:0070128"}


id: PBO:0038617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACE2 divergent transcript","termid":"PBO:0038617"}


id: GO:0006717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete juvenile hormone binding (obsolete GO:0006717)","synonyms":[{"name":"juvenile hormone binding","type":"exact"}],"termid":"GO:0006717"}


id: MONDO:0011461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any febrile seizures, familial in which the cause of the disease is a mutation in the SCN1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"},{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 2","secondary_identifiers":["MEDGEN:388117","DOID:0111294","MESH:C565810","UMLS:C1858673","GARD:18661","OMIM:604403"],"synonyms":[{"name":"GEFS+, type 2","type":"exact"},{"name":"GEFSP2","type":"related"},{"name":"SCN1A febrile seizures, familial","type":"exact"},{"name":"febrile seizures, familial caused by mutation in SCN1A","type":"exact"},{"name":"febrile seizures, familial, 3A","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 2","type":"exact"}],"termid":"MONDO:0011461","xrefs":{"Monarch":{"xref_id":"0011461"}}}


id: PBO:0058034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4255","termid":"PBO:0058034"}


id: MONDO:0003412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant hemangiopericytoma arising from the retroperitoneum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"retroperitoneal neoplasm","termid":"MONDO:0024645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retroperitoneal hemangiopericytoma","secondary_identifiers":["DOID:5373","UMLS:C1335777","NCIT:C5386","MEDGEN:277597"],"synonyms":[{"name":"retroperitoneal space hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003412","xrefs":{"Monarch":{"xref_id":"0003412"}}}


id: GO:2000850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of corticosteroid hormone secretion","termid":"GO:2000847"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"negatively_regulates","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"}


id: PBO:0042284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1d molecule","termid":"PBO:0042284"}


id: GO:0110002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tRNA methylation.","definition_xrefs":["PMID:23074192","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"regulates","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of tRNA methylation","termid":"GO:0110002"}


id: PBO:0002939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siroheme synthase (predicted)","termid":"PBO:0002939"}


id: SO:0000159
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point at which one or more contiguous nucleotides were excised.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion","secondary_identifiers":["SO:1000033","loinc:LA6692-3","http://en.wikipedia.org/wiki/Nucleotide_deletion"],"synonyms":[{"name":"deleted_sequence","type":"exact"},{"name":"nucleotide deletion","type":"exact"},{"name":"nucleotide_deletion","type":"exact"}],"termid":"SO:0000159"}


id: GO:1905005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial to mesenchymal transition involved in endocardial cushion formation.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:BHF","GOC:TermGenie","PMID:18718461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"regulates","term_name":"epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:1905005"}


id: PBO:0077111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 17B pseudogene 1","termid":"PBO:0077111"}


id: GO:0010987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of high-density lipoprotein particle clearance. High-density lipoprotein particle clearance is the process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of high-density lipoprotein particle clearance","termid":"GO:0010982"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein particle clearance","termid":"GO:0010985"},{"relation_name":"negatively_regulates","term_name":"high-density lipoprotein particle clearance","termid":"GO:0034384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of high-density lipoprotein particle clearance","termid":"GO:0010987"}


id: PBO:0048950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 1","termid":"PBO:0048950"}


id: PBO:0067775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 75","termid":"PBO:0067775"}


id: MONDO:0859313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with speech impairment and with or without seizures","secondary_identifiers":["MEDGEN:1824025","UMLS:C5774252","OMIM:620114"],"termid":"MONDO:0859313","xrefs":{"Monarch":{"xref_id":"0859313"}}}


id: MONDO:0859141
data:
  {"annotated_genes":["SJAG_03938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86265],"is_not":false,"summary":null,"term":"MONDO:0859141"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and cerebellar hypoplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18545","MEDGEN:1786150","OMIM:619306","UMLS:C5543332"],"termid":"MONDO:0859141","terms_by_termid":{"MONDO:0859141":null},"xrefs":{"Monarch":{"xref_id":"0859141"}}}


id: MONDO:0008973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chondrodysplasia punctata, Toriello type is a rare, non-rhizomelic, primary bone dysplasia syndrome characterized by calcific stippling of epiphyses in association with minor facial abnormalities, short stature and ocular colobomata. In addition, patients present chondrodysplasia punctata, brachycephaly, flat facial profile with small nose, flat lower eyelids and low-set ears, developmental delay, brachytelephalangy and deep palmar creases. Complex congenital cardiac disease and central nervous system anomalies (including partial absence of corpus callosum, small vermis, enlargement of the cisterna magna and/or of the anterior horns of the lateral ventricles) have been reported.","definition_xrefs":["Orphanet:79347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-rhizomelic chondrodysplasia punctata","termid":"MONDO:0015775"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia punctata, Toriello type","secondary_identifiers":["SCTID:715631005","OMIM:215105","UMLS:C1859132","icd11.foundation:1167798993","MEDGEN:347071","GARD:16716","MESH:C565853"],"synonyms":[{"name":"Toriello-Higgins-Miller syndrome","type":"exact"},{"name":"chondrodysplasia punctata syndrome","type":"related"}],"termid":"MONDO:0008973","xrefs":{"Monarch":{"xref_id":"0008973"}}}


id: SO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tag that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_tag","synonyms":[{"name":"engineered tag","type":"exact"}],"termid":"SO:0000807"}


id: MONDO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to shellfish or shellfish products.","definition_xrefs":["MESH:D000067208"],"gene_count":0,"genotype_count":0,"name":"obsolete shellfish allergy (obsolete MONDO:0000770)","secondary_identifiers":["DOID:0060495","NCIT:C172320","SCTID:300913006"],"termid":"MONDO:0000770","xrefs":{"Monarch":{"xref_id":"0000770"}}}


id: PBO:0040913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 17","termid":"PBO:0040913"}


id: GO:0003928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAB small monomeric GTPase activity (obsolete GO:0003928)","synonyms":[{"name":"RAB small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003928"}


id: GO:0047267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + undecaprenyl phosphate = GDP + D-mannosyl-1-phosphoundecaprenol.","definition_xrefs":["EC:2.4.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"undecaprenyl-phosphate mannosyltransferase activity","synonyms":[{"name":"GDP mannose-undecaprenyl phosphate mannosyltransferase activity","type":"related"},{"name":"GDP-D-mannose:lipid phosphate transmannosylase activity","type":"related"},{"name":"GDP-mannose:undecaprenyl-phosphate D-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-undecaprenyl phosphate mannosyltransferase activity","type":"related"}],"termid":"GO:0047267"}


id: PBO:0111849
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PUA domain","termid":"PBO:0111849"}


id: GO:0045906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of vasoconstriction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vasoconstriction","synonyms":[{"name":"down regulation of vasoconstriction","type":"exact"},{"name":"down-regulation of vasoconstriction","type":"exact"},{"name":"downregulation of vasoconstriction","type":"exact"},{"name":"inhibition of vasoconstriction","type":"narrow"}],"termid":"GO:0045906"}


id: MONDO:0017076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Posterior meningocele is a rare neural tube closure defect characterized by the herniation of a cerebrospinal fluid-filled sac, that is lined by dura and arachnoid mater, through a posterior spina bifida and covered by a layer of skin of variable thickness, which may be dysplastic or ulcerated. The spinal cord and nerves are generally not included and function normally, although sometimes a tethered cord may be associated. They are most commonly located in the lumbar or sacral region.","definition_xrefs":["Orphanet:268810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida cystica","termid":"MONDO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"posterior meningocele","secondary_identifiers":["UMLS:C5680741","icd11.foundation:1464755755","GARD:20965","MEDGEN:1806905"],"termid":"MONDO:0017076","xrefs":{"Monarch":{"xref_id":"0017076"}}}


id: GO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent cytosolic phospholipase A2 activity (obsolete GO:0004627)","synonyms":[{"name":"calcium-dependent cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004627"}


id: MONDO:0016418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple system atrophy, cerebellar type (MSA-c) is a form of multiple system atrophy (MSA) with predominant cerebellar features (gait and limb ataxia, oculomotor dysfunction, and dysarthria).","definition_xrefs":["Orphanet:227510"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-hereditary degenerative ataxia (obsolete MONDO:0016592)","termid":"MONDO:0016592"},{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005559"],"is_obsolete":false,"name":"multiple system atrophy, cerebellar type","secondary_identifiers":["GARD:20565","NANDO:1200035","UMLS:C5554234","icd11.foundation:1585600114","MEDGEN:1843304"],"synonyms":[{"name":"MSA, cerebellar type","type":"exact"},{"name":"MSA-c","type":"exact"},{"name":"sporadic OPCA type 1","type":"exact"},{"name":"sporadic olivopontocerebellar atrophy type 1","type":"exact"}],"termid":"MONDO:0016418","xrefs":{"Monarch":{"xref_id":"0016418"}}}


id: PBO:0072256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 31","termid":"PBO:0072256"}


id: PBO:0030199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cytochalasin_B","termid":"PBO:0030199"}


id: PR:O74505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC594.02c gene.","definition_xrefs":["UniProtKB:O74505","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C594.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.02c","synonyms":[{"name":"Spom972h-SPCC594.02c","type":"exact"}],"termid":"PR:O74505"}


id: GO:0090636
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The desmosomal part containing plakoglobins, plakophilins, the N-termini of desmoplakins, as well as the cytoplasmic tails of the desmosomal cadherins, which together attach the plaque to the plasma membrane.","definition_xrefs":["PMID:20066089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"desmosome","termid":"GO:0030057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer dense plaque of desmosome","termid":"GO:0090636"}


id: PBO:0052411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 5","termid":"PBO:0052411"}


id: PBO:0082668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cytosolic Fe-S protein assembly (CIA) machinery; contains an Fe-S cluster that receives electrons from NADPH via the action of Tah18p in an early step in the CIA pathway; ortholog of human Ciapin1; protein abundance increases in response to DNA replication stress; inviability of the null mutant is functionally complemented by human CIAPIN1","termid":"PBO:0082668"}


id: PBO:0046116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2","termid":"PBO:0046116"}


id: PBO:0051763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 7 pseudogene 2","termid":"PBO:0051763"}


id: GO:0071419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amphetamine","termid":"GO:0001975"},{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amphetamine","termid":"GO:0071419"}


id: MONDO:1011540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypokalaemic periodic paralysis that occurs in lion.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypokalaemic periodic paralysis, non-human animal","termid":"MONDO:1011434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypokalaemic periodic paralysis, lion","secondary_identifiers":["OMIA:001759-9689"],"termid":"MONDO:1011540","xrefs":{"Monarch":{"xref_id":"1011540"}}}


id: PATO:0002536
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a shape like a boomerang, with two arms connected at an angle.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"boomerang shaped","termid":"PATO:0002536"}


id: PBO:0004583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication endonuclease-helicase Dna2","termid":"PBO:0004583"}


id: PBO:0027426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_double-strand_break_repair_junction_in_presence_of_persistent_double-strand_breaks","termid":"PBO:0027426"}


id: GO:0048104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation of hairs or sensory bristles that cover the body surface of an adult, such that they all point in a uniform direction along the plane of the epithelium from which they project.","definition_xrefs":["GOC:jid","GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of body hair or bristle planar orientation","termid":"GO:0048104"}


id: PBO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ste11","termid":"PBO:0000896"}


id: MONDO:1040009
data:
  {"annotated_genes":["SJAG_04528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008701"},{"annotations":[84959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100325"}]},"cv_name":"mondo","definition":"Any skeletal dysplasia in which the cause of the disease is a variation in the TRIP11 gene. Reduced protein function in TRIP11 causes a spectrum of skeletal symptoms from a more mild phenotype, called ondontochondrodysplasia, with features including short stature and joint laxity to a more severe phenotype, called achondrogenesis type 1A, which presents as a lethal prenatal or neonatal skeletal dysplasia. The clinical severity of achondrogenesis compared to ondontochondrodysplasia is related to the residual function of the gene which is not currently possible to anticipate based on genotype alone. The phenotype cannot fully be predicted by genotype alone, evidenced by variants being reported with both phenotypes.","definition_xrefs":["PMID:30728324","PMID:20089971","PMID:31903676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04528":null},"genotype_count":0,"is_obsolete":false,"name":"TRIP11-related skeletal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:1040009","terms_by_termid":{"MONDO:0008701":null,"MONDO:0100325":null},"xrefs":{"Monarch":{"xref_id":"1040009"}}}


id: GO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"recombination nodule","termid":"GO:0005713"}


id: MONDO:0100423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly PTPN11 gene mutation. (Mutation of the protein tyrosine phosphatase, non-receptor type 11 gene. It is seen in cases of juvenile myelomonocytic leukemia.)","definition_xrefs":["NCIT:C82612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, PTPN11 gene mutation","synonyms":[{"name":"AML, BPTP3 Gene Mutation","type":"exact"},{"name":"AML, PTP-1D Gene Mutation","type":"exact"},{"name":"AML, PTP2C Gene Mutation","type":"exact"},{"name":"AML, PTPN11 gene mutation","type":"exact"},{"name":"AML, Protein Tyrosine Phosphatase Non-Receptor Type 11 Gene Mutation","type":"exact"},{"name":"AML, Protein Tyrosine Phosphatase, Non-Receptor Type 11 Gene Mutation","type":"exact"},{"name":"AML, SH-PTP2 Gene Mutation","type":"exact"},{"name":"AML, SHP-2 Gene Mutation","type":"exact"},{"name":"AML, SHP2 Gene Mutation","type":"exact"}],"termid":"MONDO:0100423","xrefs":{"Monarch":{"xref_id":"0100423"}}}


id: PBO:0063089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 7","termid":"PBO:0063089"}


id: GO:0030777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-scoulerine + S-adenosyl-L-methionine(1+) = (S)-tetrahydrocolumbamine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.117","RHEA:23808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"(S)-scoulerine 9-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.117-RXN","KEGG_REACTION:R03835"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-scoclaurine 9-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:(S)-scoulerine 9-O-methyltransferase activity","type":"related"}],"termid":"GO:0030777"}


id: PBO:0079185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 14, pseudogene","termid":"PBO:0079185"}


id: GO:0006978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["PMID:10967424"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (obsolete GO:0006978)","termid":"GO:0006978"}


id: PBO:0008516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family protein, involved in iron-sulfur cluster assembly (predicted)","termid":"PBO:0008516"}


id: GO:0048196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The matrix external to the plant plasma membrane, composed of the cell wall and middle lamella.","definition_xrefs":["PMID:4327466","GOC:jid","GOC:mtg_sensu","PMID:11351084"],"gene_count":0,"genotype_count":0,"name":"obsolete plant extracellular matrix (obsolete GO:0048196)","synonyms":[{"name":"middle lamella-containing extracellular matrix","type":"related"},{"name":"plant extracellular matrix","type":"exact"}],"termid":"GO:0048196"}


id: GO:0050840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a component of the extracellular matrix.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix binding","synonyms":[{"name":"adhesive extracellular matrix constituent","type":"related"},{"name":"extracellular matrix constituent binding","type":"exact"}],"termid":"GO:0050840"}


id: PBO:0050841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IBA57 divergent transcript","termid":"PBO:0050841"}


id: MONDO:0060663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart defects, multiple types","termid":"MONDO:0000119"},{"relation_name":"is_a","term_name":"GATA5-related congenital heart defects","termid":"MONDO:0100541"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart defects, multiple types, 5","secondary_identifiers":["MEDGEN:1636547","OMIM:617912","UMLS:C4693563"],"synonyms":[{"name":"CHTD5","type":"related"},{"name":"CONGENITAL heart defects, multiple types, 5","type":"related"}],"termid":"MONDO:0060663","xrefs":{"Monarch":{"xref_id":"0060663"}}}


id: MONDO:0008574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Tl antigen (obsolete MONDO:0008574)","secondary_identifiers":["OMIM:188850"],"synonyms":[{"name":"Thymus leukemia antigen","type":"related"},{"name":"Tl antigen","type":"exact"},{"name":"histocompatibility 2, T-region locus 18","type":"related"}],"termid":"MONDO:0008574","xrefs":{"Monarch":{"xref_id":"0008574"}}}


id: MONDO:0010422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with a risk allele in in the PCDH11X gene on chromosome Xq21.3.","definition_xrefs":["PMID:19136949","DOID:0110036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease 16","secondary_identifiers":["UMLS:C2677888","OMIM:300756","MEDGEN:394384","MESH:C567463"],"synonyms":[{"name":"AD16","type":"exact"},{"name":"Alzheimer disease 16","type":"exact"},{"name":"Alzheimer's disease 16","type":"exact"},{"name":"Alzheimer's disease type 16","type":"exact"}],"termid":"MONDO:0010422","xrefs":{"Monarch":{"xref_id":"0010422"}}}


id: PBO:0003247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3-phosphate dehydrogenase Gpd3","termid":"PBO:0003247"}


id: PBO:0005165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-associated factor Raf2","termid":"PBO:0005165"}


id: PBO:0047459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ficolin 3","termid":"PBO:0047459"}


id: MONDO:0008759
data:
  {"annotated_genes":["SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86762],"is_not":false,"summary":null,"term":"MONDO:0008759"}]},"cv_name":"mondo","definition":"A rare, genetic, inborn error of metabolism disorder characterized by neonatal-onset of developmental delay, hypotonia, hepatomegaly, lactic acidemia, increased creatine kinase levels, elevated alpha-ketoglutaric acid in urine, and a decreased plasma beta-hydroxybutyrate-to-acetoacetate ratio. Pyruvate dehydrogenase deficiency can be associated, leading to hypoglycemia and neurologic anomalies, including seizures.","definition_xrefs":["Orphanet:31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"tricarboxylic acid cycle disorder","termid":"MONDO:0016790"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"oxoglutaricaciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081326","GARD:617","SCTID:733630004","MEDGEN:414553","MESH:C536582","OMIM:203740","UMLS:C2752074"],"synonyms":[{"name":"2 alpha ketoglutarate dehydrogenase deficiency","type":"related"},{"name":"2-ketoglutarate dehydrogenase deficiency","type":"related"},{"name":"ALPHA-ketoglutarate dehydrogenase deficiency","type":"related"},{"name":"Alpha KGD deficiency","type":"related"},{"name":"Alpha-Kgd deficiency","type":"related"},{"name":"Alpha-ketoglutarate dehydrogenase deficiency","type":"exact"},{"name":"Oxoglutaric aciduria","type":"related"},{"name":"oxoglutarate dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0008759","terms_by_termid":{"MONDO:0008759":null},"xrefs":{"Monarch":{"xref_id":"0008759"}}}


id: GO:1902230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:TermGenie","PMID:15314165","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902229"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"down regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902230"}


id: GO:0098978
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses glutamate as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glutamatergic synapse","termid":"GO:0098978"}


id: FYPO:0001341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which a cellular response to stress is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to stress during vegetative growth","synonyms":[{"name":"abnormal cellular response to stress during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001341"}


id: PBO:0047551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 9","termid":"PBO:0047551"}


id: PR:O13838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup40 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19E9.01c","synonyms":[{"name":"Spom972h-nup40","type":"exact"},{"name":"nuclear pore protein nup40 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13838"}


id: FYPO:0006365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the meiotic spindle pole body (SPB) dissociates from the nucleus. Normally the SPB is embedded in the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:24954111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiotic cell cycle","termid":"FYPO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"meiotic spindle pole body detached from nucleus","synonyms":[{"name":"meiotic SPB detached from nucleus","type":"exact"},{"name":"meiotic spindle pole body detached from nuclear envelope","type":"related"},{"name":"meiotic spindle pole body dissociated from nucleus","type":"exact"},{"name":"spindle pole body detached from nucleus during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006365"}


id: GO:0043475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pigment, any general or particular coloring matter in living organisms, as part of the accumulation of pigment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigmentation","termid":"GO:0043474"},{"relation_name":"part_of","term_name":"pigment accumulation","termid":"GO:0043476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process involved in pigment accumulation","synonyms":[{"name":"pigment metabolic process during pigment accumulation","type":"related"},{"name":"pigment metabolism during pigment accumulation","type":"related"}],"termid":"GO:0043475"}


id: GO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of precursor Z to molybdopterin, the final step in molybdopterin biosynthesis.","definition_xrefs":["PMID:18154309","PMID:8514783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"molybdopterin synthase activity","secondary_identifiers":["Reactome:R-HSA-947541","EC:2.8.1.12","RHEA:26333"],"termid":"GO:0030366"}


id: MONDO:0017197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopathia striata-pigmentary dermopathy-white forelock syndrome is characterized by the association of osteopathia striata (longitudinal striations through most of the long bones) with a macular, hyperpigmented dermopathy and a white forelock.","definition_xrefs":["Orphanet:2779"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"osteopathia striata-pigmentary dermopathy-white forelock syndrome","secondary_identifiers":["GARD:5562","MEDGEN:419711","MESH:C536054","UMLS:C2931096"],"synonyms":[{"name":"Whyte Murphy syndrome","type":"related"},{"name":"Whyte-Murphy syndrome","type":"exact"},{"name":"osteopathia striata associated with familial dermopathy and white forelock","type":"related"},{"name":"osteopathia striata with pigmentary dermopathy including white forelock","type":"related"}],"termid":"MONDO:0017197","xrefs":{"Monarch":{"xref_id":"0017197"}}}


id: PBO:0056569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalin 1","termid":"PBO:0056569"}


id: FYPO:0003657
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118915],"is_not":false,"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the endoplasmic reticulum is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"},{"relation_name":"is_a","term_name":"protein mislocalized to endoplasmic reticulum","termid":"FYPO:0006590"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to endoplasmic reticulum during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"protein mislocalised to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"protein mislocalized to ER during vegetative growth","type":"exact"},{"name":"protein mislocalized to endoplasmic reticulum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003657","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: GO:0033531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stachyose, the tetrasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"stachyose metabolic process","synonyms":[{"name":"stachyose metabolism","type":"exact"}],"termid":"GO:0033531"}


id: GO:0098795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A posttranscriptional gene silencing pathway that involves the cleavage of mRNAs in a non-gene-specific manner.","definition_xrefs":["PMID:15009896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"global gene silencing by mRNA cleavage","secondary_identifiers":["GO:0030423"],"synonyms":[{"name":"RNA interference, targeting of mRNA for destruction","type":"related"},{"name":"gene silencing by mRNA cleavage","type":"broad"},{"name":"mRNA cleavage involved in gene silencing","type":"broad"},{"name":"mRNA destabilization-mediated gene silencing","type":"related"},{"name":"targeting of mRNA for destruction involved in RNA interference","type":"related"}],"termid":"GO:0098795"}


id: FYPO:0002580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature transfer RNA (tRNA) measured in a cell is normal (i.e. indistinguishable from wild type). Total tRNA or a specific tRNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mature tRNA level","synonyms":[{"name":"normal mature tRNA accumulation","type":"related"},{"name":"normal mature tRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature tRNA level during vegetative growth","type":"exact"},{"name":"normal mature tRNA transcript level","type":"exact"},{"name":"normal mature transfer RNA level","type":"exact"},{"name":"normal tRNA level","type":"broad"}],"termid":"FYPO:0002580"}


id: MONDO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes in the sigmoid colon region of the large intestine (intestine, large).","definition_xrefs":["MESH:D012810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"sigmoid disease","secondary_identifiers":["DOID:1897","UMLS:C0037072","MEDGEN:20752"],"termid":"MONDO:0002139","xrefs":{"Monarch":{"xref_id":"0002139"}}}


id: GO:1904089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of neuron apoptotic process.","definition_xrefs":["GO_REF:0000063","GOC:TermGenie","PMID:20150917","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of neuron apoptotic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1904089)","synonyms":[{"name":"negative regulation of neuron apoptosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of programmed cell death, neurons by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904089"}


id: FYPO:0004893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is normal (i.e. indistinguishable from wild type) during the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PMID:11069657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal 1,3-beta-D-glucan synthase activity during vegetative growth","synonyms":[{"name":"normal 1,3-beta-D-glucan synthase activity during vegetative growth during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004893"}


id: PBO:0044613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 15","termid":"PBO:0044613"}


id: MONDO:0024387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal tumor arising from the ovary, without metastatic potential.","definition_xrefs":["NCIT:C6803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian sex cord-stromal tumor","termid":"MONDO:0021657"},{"relation_name":"is_a","term_name":"sex cord-stromal benign neoplasm","termid":"MONDO:0024988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign ovarian sex cord-stromal tumor","secondary_identifiers":["UMLS:C1332528","DOID:0080370","MEDGEN:231435"],"synonyms":[{"name":"Sex cord stromal tumor, benign","type":"exact"},{"name":"benign Sex cord-stromal neoplasm of ovary","type":"exact"},{"name":"benign Sex cord-stromal neoplasm of the ovary","type":"exact"},{"name":"benign Sex cord-stromal tumor of ovary","type":"exact"},{"name":"benign Sex cord-stromal tumor of the ovary","type":"exact"},{"name":"benign Sex cord-stromal tumour of ovary","type":"exact"},{"name":"benign Sex cord-stromal tumour of the ovary","type":"exact"},{"name":"benign ovarian Sex cord-stromal neoplasm","type":"exact"},{"name":"benign ovarian Sex cord-stromal tumor","type":"exact"},{"name":"benign ovarian Sex cord-stromal tumour","type":"exact"},{"name":"ovarian SEX cord-stromal tumor, benign","type":"exact"},{"name":"ovarian sex cord-stromal tumor, benign","type":"exact"}],"termid":"MONDO:0024387","xrefs":{"Monarch":{"xref_id":"0024387"}}}


id: PBO:0057055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 140","termid":"PBO:0057055"}


id: PBO:0059233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L3 pseudogene 1","termid":"PBO:0059233"}


id: GO:0002828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type 2 immune response","synonyms":[{"name":"regulation of T-helper 2 type immune response","type":"narrow"},{"name":"regulation of Th2 immune response","type":"narrow"}],"termid":"GO:0002828"}


id: FYPO:0003673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal ATP binding","termid":"FYPO:0003673"}


id: PBO:0085971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; predicted metabolic role based on network analysis derived from ChIP experiments, a large-scale deletion study and localization of transcription factor binding sites; null mutant is sensitive to temperature oscillation in a cdc13-1 mutant","termid":"PBO:0085971"}


id: PBO:0051273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 4","termid":"PBO:0051273"}


id: PBO:0040017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 6","termid":"PBO:0040017"}


id: GO:0008626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals induced by granzymes which triggers the apoptotic death of a cell. The pathway starts with reception of a granzyme signal, and ends when the execution phase of apoptosis is triggered. Granzymes are serine proteases that are secreted by cytotoxic T cells and natural killer cells to induce apoptosis in target cells.","definition_xrefs":["PMID:17158907","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"},{"relation_name":"is_a","term_name":"granzyme-mediated programmed cell death signaling pathway","termid":"GO:0140507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"granzyme-mediated apoptotic signaling pathway","synonyms":[{"name":"apoptotic signaling pathway in response to granzyme","type":"related"},{"name":"induction of apoptosis by granzyme","type":"related"}],"termid":"GO:0008626"}


id: PBO:0049727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 8","termid":"PBO:0049727"}


id: GO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TMP, ribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TMP metabolic process","termid":"GO:0046044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"TMP catabolic process","synonyms":[{"name":"TMP breakdown","type":"exact"},{"name":"TMP catabolism","type":"exact"},{"name":"TMP degradation","type":"exact"}],"termid":"GO:0046045"}


id: PBO:0075638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 3","termid":"PBO:0075638"}


id: GO:0009134
data:
  {"annotated_genes":["SJAG_06621","SJAG_00685","SJAG_00027","SJAG_03903","SJAG_00839","SJAG_01310","SJAG_00605","SJAG_02107","SJAG_02796","SJAG_03828","SJAG_02009","SJAG_00461","SJAG_02369","SJAG_02945","SJAG_03373","SJAG_04192","SJAG_03676","SJAG_02785","SJAG_06622","SJAG_03852","SJAG_04334","SJAG_05314","SJAG_03977","SJAG_00633","SJAG_01595","SJAG_02135","SJAG_04495","SJAG_03660","SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70177],"is_not":false,"summary":null,"term":"GO:0009134"},{"annotations":[98051,109193,103427,105625,103173,109196,109198,94773,105255,116159,109195,109192,94284,97772,109194,105257,109197,77597,105256,105626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[97969,111374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72758,75754],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[69732],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[113118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01595":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside diphosphate breakdown","type":"exact"},{"name":"nucleoside diphosphate catabolism","type":"exact"},{"name":"nucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009134","terms_by_termid":{"GO:0006110":null,"GO:0006256":null,"GO:0009134":null,"GO:0009191":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: GO:0000479
data:
  {"annotated_genes":["SJAG_04174","SJAG_03234","SJAG_01551","SJAG_03952","SJAG_04916","SJAG_00955","SJAG_01581","SJAG_02644","SJAG_03846","SJAG_01476","SJAG_04224","SJAG_04582","SJAG_02547","SJAG_00965","SJAG_04524","SJAG_03425","SJAG_02374","SJAG_00344","SJAG_02275","SJAG_03796","SJAG_00897","SJAG_01623","SJAG_02553","SJAG_00772","SJAG_06613","SJAG_02250","SJAG_03789"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74095,75577,76414],"is_not":false,"summary":null,"term":"GO:0000479"},{"annotations":[103902,71010,91453,94718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000448"},{"annotations":[77697,72680,69994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000480"},{"annotations":[94468,78015,104347,105458,96261,108805,69992,118401,104566,72678,70872,102914,74228,115203,71480,105457,115115,96560,113291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000447"},{"annotations":[74229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[69993,72679,77696,108806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with three genes, in this order, are produced in the nuclei of many eukaryotic species, including S. cerevisiae.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000479","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000461":null,"GO:0000472":null,"GO:0000479":null,"GO:0000480":null}}


id: PBO:0083071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroxyacetone kinase; required for detoxification of dihydroxyacetone (DHA); involved in stress adaptation","termid":"PBO:0083071"}


id: MONDO:0005833
data:
  {"annotated_genes":["SJAG_02648","SJAG_01181","SJAG_00570","SJAG_03536","SJAG_01407","SJAG_00993","SJAG_02572","SJAG_03453","SJAG_01697","SJAG_04745","SJAG_02923","SJAG_02342","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[85431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[86378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[85736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[86231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[86083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[86673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[85957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[85950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[87013,87014,87012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"A disease involving the lymphatic part of lymphoid system.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid system disorder","termid":"MONDO:0044986"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01407":null,"SJAG_01697":null,"SJAG_02342":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:75","NCIT:C50764","MESH:D008206","SCTID:362971004","EFO:0007352","MEDGEN:892707","UMLS:C4021976"],"synonyms":[{"name":"adenopathy","type":"related"},{"name":"disease of lymphatic part of lymphoid system","type":"exact"},{"name":"disease of lympoid system","type":"related"},{"name":"disease or disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymph node and lymphatics","type":"exact"},{"name":"disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymphatic system","type":"exact"},{"name":"disorder of lymphoid system","type":"related"},{"name":"glands, swollen","type":"exact"},{"name":"lymphadenopathy","type":"narrow"},{"name":"lymphangiopathy","type":"narrow"},{"name":"lymphatic disease","type":"exact"},{"name":"lymphatic disorder","type":"exact"},{"name":"lymphatic part of lymphoid system disease","type":"exact"},{"name":"lymphatic part of lymphoid system disease or disorder","type":"exact"},{"name":"lympoid system disease","type":"related"},{"name":"swollen gland","type":"exact"},{"name":"swollen glands","type":"exact"}],"termid":"MONDO:0005833","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0009756":null,"MONDO:0011257":null,"MONDO:0011336":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012371":null,"MONDO:0013135":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0005833"}}}


id: MONDO:1012152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megakaryoblastic leukemia, non-human animal","termid":"MONDO:1011810"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryoblastic leukemia, dog","secondary_identifiers":["OMIA:000630-9615"],"termid":"MONDO:1012152","xrefs":{"Monarch":{"xref_id":"1012152"}}}


id: GO:0100036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates purine nucleotide biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100036)","termid":"GO:0100036"}


id: PATO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity which relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"viscous","termid":"PATO:0000998"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased viscosity","synonyms":[{"name":"low viscosity","type":"exact"}],"termid":"PATO:0001694"}


id: MONDO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation or irritation of a synovial bursa, the fibrous sac that acts as a cushion between moving structures of bones, muscles, tendons or skin.","definition_xrefs":["MESH:D002062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"synovial bursa disorder","termid":"MONDO:0056802"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bursitis","secondary_identifiers":["MEDGEN:691","DOID:2965","icd11.foundation:1984620329","NCIT:C94407","ICD9:727.3","UMLS:C0006444","SCTID:84017003"],"synonyms":[{"name":"Bursitides","type":"related"},{"name":"Capsulitides","type":"related"},{"name":"Capsulitides, adhesive","type":"related"},{"name":"Capsulitides, shoulder adhesive","type":"related"},{"name":"adhesive Capsulitides","type":"related"},{"name":"adhesive Capsulitides, shoulder","type":"related"},{"name":"adhesive capsulitis","type":"related"},{"name":"adhesive capsulitis of the shoulder","type":"related"},{"name":"adhesive capsulitis, shoulder","type":"related"},{"name":"capsulitis","type":"related"},{"name":"capsulitis, adhesive","type":"related"},{"name":"capsulitis, shoulder adhesive","type":"related"},{"name":"frozen shoulder","type":"related"},{"name":"frozen shoulders","type":"related"},{"name":"inflammation of synovial bursa","type":"exact"},{"name":"shoulder adhesive Capsulitides","type":"related"},{"name":"shoulder adhesive capsulitis","type":"related"},{"name":"shoulder, frozen","type":"related"},{"name":"shoulders, frozen","type":"related"},{"name":"synovial bursa inflammation","type":"exact"}],"termid":"MONDO:0002471","xrefs":{"Monarch":{"xref_id":"0002471"}}}


id: GO:0141123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the skin of another organism, leading to damage or temporary subversion of the skin.","definition_xrefs":["PMID:28194160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of tissue in another organism","termid":"GO:0141062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermonecrosis in another organism","termid":"GO:0141123"}


id: PBO:0055488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2922","termid":"PBO:0055488"}


id: GO:0043947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont catalytic activity (obsolete GO:0043947)","synonyms":[{"name":"activation by host of symbiont enzyme activity","type":"narrow"},{"name":"activation of symbiont enzyme activity","type":"narrow"},{"name":"positive regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"upregulation by host of symbiont enzyme activity","type":"exact"}],"termid":"GO:0043947"}


id: GO:0120207
data:
  {"annotated_genes":["SJAG_02572"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87737],"is_not":false,"summary":null,"term":"GO:0120207"}]},"cv_name":"biological_process","definition":"The process of selecting and or marking the position where endocytosis will occur.","definition_xrefs":["GOC:vw","PMID:30044717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"},{"relation_name":"part_of","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"endocytosis, site selection","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120207","terms_by_termid":{"GO:0120207":null}}


id: PBO:0054717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2126","termid":"PBO:0054717"}


id: PBO:0086541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR006C is not an essential gene","termid":"PBO:0086541"}


id: MONDO:1010002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myoclonus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, non-human animal","secondary_identifiers":["OMIA:000689"],"termid":"MONDO:1010002","xrefs":{"Monarch":{"xref_id":"1010002"}}}


id: PBO:0076526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 39","termid":"PBO:0076526"}


id: GO:0010828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of D-glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"positively_regulates","term_name":"D-glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of D-glucose transmembrane transport","synonyms":[{"name":"positive regulation of glucose transmembrane transport","type":"exact"},{"name":"positive regulation of glucose transport","type":"related"}],"termid":"GO:0010828"}


id: GO:0040025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:ems","GOC:kmv","ISBN:087969307X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval development","termid":"GO:0040025"}


id: MONDO:0021091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serous or mucinous benign or low malignant potential cystic epithelial neoplasm. It is characterized by the presence of glandular epithelial cells forming papillary structures.","definition_xrefs":["NCIT:C2974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"},{"relation_name":"is_a","term_name":"papillary cystic neoplasm","termid":"MONDO:0006349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary cystadenoma","secondary_identifiers":["ICDO:8450/0","MEDGEN:41386","MESH:D018292","UMLS:C0010636"],"synonyms":[{"name":"cystadenoma, papillary, benign","type":"exact"},{"name":"papillary cystadenoma","type":"exact"}],"termid":"MONDO:0021091","xrefs":{"Monarch":{"xref_id":"0021091"}}}


id: GO:0072172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric tubule from unspecified parts. A mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule formation","termid":"GO:0072079"},{"relation_name":"part_of","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric tubule formation","termid":"GO:0072172"}


id: PBO:0073004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 4","termid":"PBO:0073004"}


id: PBO:0036191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0036191"}


id: FYPO:0007491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an O-linked glycan moiety of a nascent or mature glycoprotein is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:32918581","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal O-linked glycoprotein glycan structure","synonyms":[{"name":"normal O-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0007491"}


id: GO:0070742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C2H2-type zinc finger domain of a protein. The C2H2 zinc finger is the classical zinc finger domain, in which two conserved cysteines and histidines co-ordinate a zinc ion.","definition_xrefs":["Pfam:PF00096","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"C2H2 zinc finger domain binding","termid":"GO:0070742"}


id: MONDO:0007516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectrodactyly and ectodermal dysplasia without cleft lip/palate","secondary_identifiers":["UMLS:C1851849","MESH:C565065","OMIM:129810","Orphanet:1888","MEDGEN:377536"],"synonyms":[{"name":"EEC syndrome without cleft Lip/palate","type":"related"},{"name":"ectrodactyly and ectodermal dysplasia without cleft lip/palate","type":"exact"},{"name":"ectrodactyly-ectodermal dysplasia without clefting syndrome","type":"exact"}],"termid":"MONDO:0007516","xrefs":{"Monarch":{"xref_id":"0007516"}}}


id: PBO:0063560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelota mRNA surveillance and ribosome rescue factor","termid":"PBO:0063560"}


id: GO:0006851
data:
  {"annotated_genes":["SJAG_03399","SJAG_03873"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97125,95392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"}]},"cv_name":"biological_process","definition":"The process in which a calcium ion (Ca2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03399":null,"SJAG_03873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8949215"],"synonyms":[{"name":"mitochondrial calcium transport","type":"exact"}],"termid":"GO:0006851","terms_by_termid":{"GO:0036444":null}}


id: GO:0042018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-22 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-22 receptor activity","synonyms":[{"name":"IL-22 receptor activity","type":"exact"},{"name":"IL-22R","type":"exact"}],"termid":"GO:0042018"}


id: PATO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000310 color value (obsolete PATO:0000310)","termid":"PATO:0000310"}


id: GO:2000589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000589"}


id: PBO:0059594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 6","termid":"PBO:0059594"}


id: PBO:0091275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartyl/glutamyl-tRNA amidotransferase subunit B-related Aim41","termid":"PBO:0091275"}


id: MONDO:0007461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-valvular heart disease-characteristic facies syndrome is characterized by severe short stature with disproportionately short legs, small hands, clinodactyly, valvular heart disease and dysmorphism (ptosis, high-arched palate, abnormal dentition). It has been described in a mother and two daughters. This syndrome is probably transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:2868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-valvular heart disease-characteristic facies syndrome","secondary_identifiers":["UMLS:C1852073","MEDGEN:338866","GARD:16612","OMIM:126190","MESH:C565094"],"synonyms":[{"name":"disproportionate short stature with ptosis and valvular heart lesions","type":"related"}],"termid":"MONDO:0007461","xrefs":{"Monarch":{"xref_id":"0007461"}}}


id: MONDO:0020299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 15/16 (obsolete MONDO:0020299)","termid":"MONDO:0020299","xrefs":{"Monarch":{"xref_id":"0020299"}}}


id: MONDO:0006612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process characterized by a diffuse poorly circumscribed overgrowth of adipose tissue in the face, upper middle back, and sternal region. It is associated with adrenocortical steroid therapy or an increase in endogenous adrenocortical hormone.","definition_xrefs":["NCIT:C27487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid lipomatosis","secondary_identifiers":["MEDGEN:234364","DOID:3925","UMLS:C1336506"],"synonyms":[{"name":"steroid lipomatosis","type":"exact"}],"termid":"MONDO:0006612","xrefs":{"Monarch":{"xref_id":"0006612"}}}


id: GO:0000817
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A kinetochore multiprotein complex that bridges the subunits that are in contact with centromeric DNA and the subunits bound to microtubules during kinetochore assembly. In yeast, consists of Ctf19p, Okp1p, Mcm21p, and Ame1p.","definition_xrefs":["PMID:14633972","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694","GO:0000776","GO:0005634"],"is_obsolete":false,"name":"COMA complex","synonyms":[{"name":"Ctf19p-Okp1p-Mcm1p-Ame1p complex","type":"exact"}],"termid":"GO:0000817"}


id: GO:0042106
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A T cell receptor complex in which the TCR heterodimer comprises gamma and delta chains, associated with the CD3 complex; recognizes antigen directly, without a requirement for processing and presentation by an MHC protein.","definition_xrefs":["GOC:mah","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell receptor complex","termid":"GO:0042101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"gamma-delta T cell receptor complex","synonyms":[{"name":"gamma-delta T lymphocyte receptor complex","type":"exact"},{"name":"gamma-delta T-cell receptor complex","type":"exact"},{"name":"gamma-delta T-lymphocyte receptor complex","type":"exact"},{"name":"gamma-delta TCR complex","type":"exact"}],"termid":"GO:0042106"}


id: PBO:0028031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_premeiotic_DNA_replication","termid":"PBO:0028031"}


id: MONDO:0012115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, isolated, susceptibility to, 3","secondary_identifiers":["MEDGEN:373333","OMIM:608765","UMLS:C1837461"],"synonyms":[{"name":"IS3","type":"exact"},{"name":"scoliosis, isolated, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012115","xrefs":{"Monarch":{"xref_id":"0012115"}}}


id: GO:1900666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emodin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of emodin biosynthetic process","termid":"GO:1900664"},{"relation_name":"positively_regulates","term_name":"emodin biosynthetic process","termid":"GO:1900575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of emodin biosynthetic process","synonyms":[{"name":"activation of emodin anabolism","type":"exact"},{"name":"activation of emodin biosynthesis","type":"exact"},{"name":"activation of emodin biosynthetic process","type":"narrow"},{"name":"activation of emodin formation","type":"exact"},{"name":"activation of emodin synthesis","type":"exact"},{"name":"positive regulation of emodin anabolism","type":"exact"},{"name":"positive regulation of emodin biosynthesis","type":"exact"},{"name":"positive regulation of emodin formation","type":"exact"},{"name":"positive regulation of emodin synthesis","type":"exact"},{"name":"up regulation of emodin anabolism","type":"exact"},{"name":"up regulation of emodin biosynthesis","type":"exact"},{"name":"up regulation of emodin biosynthetic process","type":"exact"},{"name":"up regulation of emodin formation","type":"exact"},{"name":"up regulation of emodin synthesis","type":"exact"},{"name":"up-regulation of emodin anabolism","type":"exact"},{"name":"up-regulation of emodin biosynthesis","type":"exact"},{"name":"up-regulation of emodin biosynthetic process","type":"exact"},{"name":"up-regulation of emodin formation","type":"exact"},{"name":"up-regulation of emodin synthesis","type":"exact"},{"name":"upregulation of emodin anabolism","type":"exact"},{"name":"upregulation of emodin biosynthesis","type":"exact"},{"name":"upregulation of emodin biosynthetic process","type":"exact"},{"name":"upregulation of emodin formation","type":"exact"},{"name":"upregulation of emodin synthesis","type":"exact"}],"termid":"GO:1900666"}


id: PBO:0089775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type Gaf1","termid":"PBO:0089775"}


id: GO:1901508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"positively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of acylglycerol transport","synonyms":[{"name":"activation of acylglycerol transport","type":"narrow"},{"name":"activation of glyceride transport","type":"narrow"},{"name":"positive regulation of glyceride transport","type":"exact"},{"name":"up regulation of acylglycerol transport","type":"exact"},{"name":"up regulation of glyceride transport","type":"exact"},{"name":"up-regulation of acylglycerol transport","type":"exact"},{"name":"up-regulation of glyceride transport","type":"exact"},{"name":"upregulation of acylglycerol transport","type":"exact"},{"name":"upregulation of glyceride transport","type":"exact"}],"termid":"GO:1901508"}


id: GO:0005547
data:
  {"annotated_genes":["SJAG_02468","SJAG_04077","SJAG_00216"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87807,102213,117275],"is_not":false,"summary":null,"term":"GO:0005547"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-3,4,5-trisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3', 4' and 5' positions.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_02468":null,"SJAG_04077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PIP3 binding","type":"exact"}],"termid":"GO:0005547","terms_by_termid":{"GO:0005547":null}}


id: MONDO:0021507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the brainstem.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brainstem neoplasm","termid":"MONDO:0021228"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of brain stem","secondary_identifiers":["MEDGEN:146353","SCTID:92029009","NCIT:C8549","UMLS:C0686400"],"synonyms":[{"name":"benign brain stem neoplasm","type":"exact"},{"name":"benign brain stem neoplasms","type":"exact"},{"name":"benign brain stem tumor","type":"exact"},{"name":"benign brain stem tumour","type":"exact"},{"name":"benign brainstem neoplasm","type":"exact"},{"name":"benign brainstem neoplasms","type":"exact"},{"name":"benign brainstem tumor","type":"exact"},{"name":"benign brainstem tumors","type":"exact"},{"name":"benign brainstem tumour","type":"exact"},{"name":"benign brainstem tumours","type":"exact"},{"name":"benign neoplasm of brainstem","type":"exact"},{"name":"benign neoplasm of the brain stem","type":"exact"},{"name":"benign neoplasm of the brainstem","type":"exact"},{"name":"benign neoplasms of brainstem","type":"exact"},{"name":"benign neoplasms of the brainstem","type":"exact"},{"name":"benign tumor of brain stem","type":"exact"},{"name":"benign tumor of brainstem","type":"exact"},{"name":"benign tumor of the brain stem","type":"exact"},{"name":"benign tumor of the brainstem","type":"exact"},{"name":"benign tumors of brainstem","type":"exact"},{"name":"benign tumors of the brainstem","type":"exact"},{"name":"benign tumour of brain stem","type":"exact"},{"name":"benign tumour of brainstem","type":"exact"},{"name":"benign tumour of the brain stem","type":"exact"},{"name":"benign tumour of the brainstem","type":"exact"},{"name":"benign tumours of brainstem","type":"exact"},{"name":"benign tumours of the brainstem","type":"exact"},{"name":"brainstem benign neoplasm","type":"exact"}],"termid":"MONDO:0021507","xrefs":{"Monarch":{"xref_id":"0021507"}}}


id: PBO:0041323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2orf74 antisense RNA 1","termid":"PBO:0041323"}


id: PBO:0043850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 like","termid":"PBO:0043850"}


id: GO:1905314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a semi-lunar valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","GO_REF:0000094","PMID:19409885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semi-lunar valve development","synonyms":[{"name":"semilunar valve development","type":"exact"},{"name":"semilunar valves development","type":"exact"}],"termid":"GO:1905314"}


id: GO:0019356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinate nucleotide from other compounds, including tryptophan.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolalkylamine metabolic process","termid":"GO:0006586"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"nicotinate nucleotide biosynthetic process","termid":"GO:0019357"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0006520"],"is_obsolete":false,"name":"nicotinate nucleotide biosynthetic process from tryptophan","synonyms":[{"name":"nicotinate nucleotide anabolism from tryptophan","type":"exact"},{"name":"nicotinate nucleotide formation from tryptophan","type":"exact"},{"name":"nicotinate nucleotide synthesis from tryptophan","type":"exact"}],"termid":"GO:0019356"}


id: PBO:0057608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-5","termid":"PBO:0057608"}


id: PBO:0048901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 25","termid":"PBO:0048901"}


id: PBO:0026832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_mating_type_region","termid":"PBO:0026832"}


id: PBO:0051153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33","termid":"PBO:0051153"}


id: GO:0000710
data:
  {"annotated_genes":["SJAG_01832","SJAG_02187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91517,107552],"is_not":false,"summary":null,"term":"GO:0000710"}]},"cv_name":"biological_process","definition":"A system for the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules. Correction of the mismatch can result in non-Mendelian segregation of alleles following meiosis.","definition_xrefs":["PMID:10357855","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair","termid":"GO:0006298"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01832":null,"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"meiotic mismatch repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000710","terms_by_termid":{"GO:0000710":null}}


id: GO:2001238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway","synonyms":[{"name":"positive regulation of extrinsic apoptosis","type":"narrow"},{"name":"positive regulation of extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001238"}


id: GO:2000527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"regulates","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000527"}


id: PBO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 14","termid":"PBO:0042152"}


id: GO:0050444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 cob(II)alamin + NADP+ = 2 aquacob(III)alamin + NADPH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aquacobalamin reductase (NADPH) activity (obsolete GO:0050444)","termid":"GO:0050444"}


id: MOD:00071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N,N,N-trimethyl-L-alanine.","definition_xrefs":["PubMed:6778808","PubMed:12590383","PubMed:3979397","PubMed:7715456","RESID:AA0062","PubMed:332162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-alanine","synonyms":[{"name":"(1S)-1-carboxy-N,N,N-trimethylethanaminium","type":"exact"},{"name":"(1S)-1-carboxy-N,N,N-trimethylethanazanium","type":"exact"},{"name":"(2S)-2-(trimethylammonio)propanoic acid","type":"exact"},{"name":"MOD_RES N,N,N-trimethylalanine","type":"exact"},{"name":"N,N,N-trimethyl-L-alanine","type":"exact"},{"name":"N,N,N-trimethylalanine cation","type":"exact"},{"name":"N,N,N-trimethylalaninium","type":"exact"},{"name":"N,N,N-trimethylated L-alanine","type":"exact"},{"name":"N2Me3+Ala","type":"exact"},{"name":"NMe3Ala","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00071"}


id: PBO:0054027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1358","termid":"PBO:0054027"}


id: MOD:00531
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartic acid with one (18)O as the result of having been deglycosylated in (18)O water.","definition_xrefs":["Unimod:170","PubMed:14435542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated L-asparagine","termid":"MOD:01293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled deglycosylated asparagine","synonyms":[{"name":"Delta:H(1)O(-1)18O(1)","type":"related"},{"name":"glycosylated asparagine 18O labeling","type":"related"}],"termid":"MOD:00531"}


id: PBO:0065294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 1","termid":"PBO:0065294"}


id: PBO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 5","termid":"PBO:0046765"}


id: PBO:0070798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 28","termid":"PBO:0070798"}


id: PBO:0088638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf4","termid":"PBO:0088638"}


id: MONDO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ARC syndrome (obsolete MONDO:0000444)","synonyms":[{"name":"pericyte cell syndromic disease","type":"exact"}],"termid":"MONDO:0000444","xrefs":{"Monarch":{"xref_id":"0000444"}}}


id: GO:0002562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through recombination of the germline genetic elements within a single genetic locus.","definition_xrefs":["PMID:16166509","GOC:add","ISBN:0781735149","PMID:16102575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"is_a","term_name":"somatic cell DNA recombination","termid":"GO:0016444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"}


id: PR:C6Y4D3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4D3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.12c","synonyms":[{"name":"Spom972h-ecl1","type":"exact"}],"termid":"PR:C6Y4D3"}


id: PBO:0089461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A (predicted)","termid":"PBO:0089461"}


id: MONDO:0013744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 12q24.2-q24.3.","definition_xrefs":["DOID:0110252","PMID:21731060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerulean cataract","termid":"MONDO:0020374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 37","secondary_identifiers":["GARD:15800","MEDGEN:482388","OMIM:614422","UMLS:C3280758"],"synonyms":[{"name":"CCA5","type":"narrow"},{"name":"CTRCT37","type":"exact"},{"name":"cataract 37","type":"exact"},{"name":"cataract 37, autosomal dominant","type":"exact"},{"name":"cataract type 37","type":"exact"},{"name":"cataract, congenital, cerulean type, 5","type":"related"},{"name":"congenital cataract cerulean type 5","type":"narrow"}],"termid":"MONDO:0013744","xrefs":{"Monarch":{"xref_id":"0013744"}}}


id: PBO:0062096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 46 pseudogene","termid":"PBO:0062096"}


id: MONDO:0004810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of ethmoid sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethmoid sinusitis","termid":"MONDO:0005756"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute ethmoiditis","secondary_identifiers":["ICD9:461.2","DOID:9506","SCTID:67832005","MEDGEN:510088","UMLS:C0155806"],"synonyms":[{"name":"acute ethmoid sinusitis","type":"exact"},{"name":"acute ethmoidal sinusitis","type":"exact"},{"name":"ethmoid sinusitis, acute","type":"exact"},{"name":"ethmoidal sinus - acute","type":"exact"}],"termid":"MONDO:0004810","xrefs":{"Monarch":{"xref_id":"0004810"}}}


id: PR:Q09854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1527.01","synonyms":[{"name":"Spom972h-mok11","type":"exact"}],"termid":"PR:Q09854"}


id: PBO:0072786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 1","termid":"PBO:0072786"}


id: MONDO:0018858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Graham Little-Piccardi-Lassueur syndrome is a variant of lichen planopilaris characterized by the clinical triad of progressive cicatricial (scarring) alopecia of the scalp, follicular keratotic papules on glabrous skin, and variable alopecia of the axillae and groin.","definition_xrefs":["Orphanet:505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Graham Little-Piccardi-Lassueur syndrome","secondary_identifiers":["UMLS:C4273658","ICD10CM:L66.1","MEDGEN:905915","GARD:3195","SCTID:718215008"],"synonyms":[{"name":"Graham Little syndrome","type":"exact"},{"name":"Graham-Little-Piccardi-Lassueur syndrome","type":"related"},{"name":"Piccardi-Lassueur-Little syndrome","type":"exact"}],"termid":"MONDO:0018858","xrefs":{"Monarch":{"xref_id":"0018858"}}}


id: PBO:0012597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HP1 family chromodomain protein 2","termid":"PBO:0012597"}


id: MONDO:1012337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency, non-human animal","termid":"MONDO:1011699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency, dog","secondary_identifiers":["OMIA:001235-9615"],"termid":"MONDO:1012337","xrefs":{"Monarch":{"xref_id":"1012337"}}}


id: GO:0004681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete casein kinase I activity (obsolete GO:0004681)","synonyms":[{"name":"casein kinase I activity","type":"exact"}],"termid":"GO:0004681"}


id: FYPO:0000245
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119116],"is_not":false,"summary":null,"term":"FYPO:0000245"},{"annotations":[119091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04312":null},"genotype_count":2,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability in stationary phase","references_by_uniquename":{"PMID:27678009":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527","SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased chronological lifespan","type":"related"},{"name":"decreased longevity","type":"exact"},{"name":"decreased viability in stationary phase","type":"exact"},{"name":"growth defect, required for stationary phase","type":"related"},{"name":"increased chronological cell aging","type":"related"},{"name":"loss of cell population viability in stationary phase","type":"exact"},{"name":"reduced viability in stationary phase","type":"exact"}],"termid":"FYPO:0000245","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000245":null,"FYPO:0005231":null}}


id: MONDO:0007082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"alopecia areata","termid":"MONDO:0005340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia areata 1","secondary_identifiers":["GARD:15035","MEDGEN:400208","MESH:C566303","UMLS:C1863094","OMIM:104000"],"synonyms":[{"name":"AA1","type":"related"},{"name":"alopecia areata 1","type":"exact"},{"name":"alopecia universalis","type":"related"}],"termid":"MONDO:0007082","xrefs":{"Monarch":{"xref_id":"0007082"}}}


id: PBO:0059520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4","termid":"PBO:0059520"}


id: GO:0110094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another using polyphosphate as the signal.","definition_xrefs":["GOC:rjd","PMID:27519410","PMID:28584190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"polyphosphate-mediated signaling","synonyms":[{"name":"polyphosphate signaling","type":"exact"}],"termid":"GO:0110094"}


id: SO:0001344
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyluridine","secondary_identifiers":["http://en.wikipedia.org/wiki/5-methyluridine","RNAMOD:052"],"synonyms":[{"name":"5-methyluridine","type":"exact"},{"name":"five methyluridine","type":"exact"},{"name":"m5U","type":"exact"}],"termid":"SO:0001344"}


id: GO:0097611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell surface furrow that wraps around a dinoflagellate cell; the transverse flagellum lies in it.","definition_xrefs":["PMID:7002229","GOC:at","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface furrow","termid":"GO:0097610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005575","GO:0009986"],"is_obsolete":false,"name":"dinoflagellate cingulum","synonyms":[{"name":"cingulum","type":"broad"},{"name":"girdle","type":"related"},{"name":"transverse groove","type":"related"}],"termid":"GO:0097611"}


id: PBO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 88 pseudogene","termid":"PBO:0070174"}


id: GO:2000444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of toll-like receptor 21 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of toll-like receptor signaling pathway","termid":"GO:0034122"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 21 signaling pathway","termid":"GO:2000443"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 21 signaling pathway","termid":"GO:0035682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 21 signaling pathway","synonyms":[{"name":"negative regulation of TLR21 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 21 signalling pathway","type":"exact"}],"termid":"GO:2000444"}


id: PBO:0076842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF2 interacting protein","termid":"PBO:0076842"}


id: MONDO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal epilepsy-intellectual disability-cerebro-cerebellar malformation is a rare, genetic neurological disorder characterized by early infantile-onset of seizures, borderline to moderate intellectual disability, cerebellar features including dysarthria and ataxia and cerebellar atrophy and cortical thickening observed on MRI imaging. Seizures are typically focal (with prominent eye blinking, facial and limb jerking), precipitated by fever and often commence with an oral sensory aura (anesthetized tongue sensation). When not properly controlled by anti-epileptic medication, weekly frequency and persistence into adult life is observed.","definition_xrefs":["Orphanet:352587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"focal epilepsy-intellectual disability-cerebro-cerebellar malformation","secondary_identifiers":["GARD:21522","MEDGEN:1640999","UMLS:C4707306"],"synonyms":[{"name":"focal epilepsy-intellectual disability-dysarthria-ataxia syndrome","type":"exact"}],"termid":"MONDO:0018125","xrefs":{"Monarch":{"xref_id":"0018125"}}}


id: MONDO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bilirubin, serum level of, quantitative trait locus 1 (obsolete MONDO:0044270)","secondary_identifiers":["OMIM:601816"],"synonyms":[{"name":"BILIQTL1","type":"related"},{"name":"bilirubin, serum level OF, quantitative trait locus 1","type":"related"},{"name":"bilirubin, serum level of, QTL1","type":"exact"}],"termid":"MONDO:0044270","xrefs":{"Monarch":{"xref_id":"0044270"}}}


id: MONDO:0957954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 14","secondary_identifiers":["MEDGEN:1851480","OMIM:620602","UMLS:C5882718"],"termid":"MONDO:0957954","xrefs":{"Monarch":{"xref_id":"0957954"}}}


id: GO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase III transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription factor activity (obsolete GO:0003709)","synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"exact"}],"termid":"GO:0003709"}


id: PBO:0048910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member E, pseudogene","termid":"PBO:0048910"}


id: PBO:0051540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL6 antisense RNA 1","termid":"PBO:0051540"}


id: MONDO:0020850
data:
  {"annotated_genes":["SJAG_03286","SJAG_01465","SJAG_03635"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86095,86096,86097],"is_not":false,"summary":null,"term":"MONDO:0020850"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 65","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648401","OMIM:618109","UMLS:C4748219","DOID:0081226","GARD:22578"],"synonyms":[{"name":"MRT65","type":"exact"},{"name":"intellectual disability, autosomal recessive 65","type":"exact"},{"name":"mental retardation, autosomal recessive 65","type":"exact"}],"termid":"MONDO:0020850","terms_by_termid":{"MONDO:0020850":null},"xrefs":{"Monarch":{"xref_id":"0020850"}}}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: MONDO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that affects the ovary. Lymphomatous involvement of the ovary is rare and in approximately half of the cases both ovaries are affected.","definition_xrefs":["NCIT:C40021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"ovarian lymphoma","secondary_identifiers":["DOID:2150","MEDGEN:276669","UMLS:C1518720"],"synonyms":[{"name":"lymphoma of ovary","type":"exact"},{"name":"ovarian lymphoma","type":"exact"},{"name":"ovary lymphoma","type":"exact"},{"name":"primary ovarian lymphoma","type":"exact"}],"termid":"MONDO:0002227","xrefs":{"Monarch":{"xref_id":"0002227"}}}


id: FYPO:0006896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of mitochondria to the cell tip is decreased during one or both meiotic nuclear divisions.","definition_xrefs":["PMID:30649994","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitochondrion localization to cell tip during meiosis","synonyms":[{"name":"decreased mitochondrial localization to cell tip during meiosis","type":"exact"},{"name":"decreased mitochondrion localisation to cell tip during meiosis","type":"exact"},{"name":"decreased mitochondrion localization to cell end during meiosis","type":"exact"},{"name":"decreased mitochondrion localization to cell tip during meiotic nuclear division","type":"exact"},{"name":"reduced mitochondrion localization to cell tip during meiosis","type":"exact"}],"termid":"FYPO:0006896"}


id: PBO:0055014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2429","termid":"PBO:0055014"}


id: GO:0060027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis usually resulting in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.","definition_xrefs":["GOC:dph","PMID:12062082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"convergent extension","termid":"GO:0060026"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in gastrulation","termid":"GO:0060027"}


id: MONDO:0010750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulnar hypoplasia-split foot syndrome is characterized by the association of severe ulnar hypoplasia, absence of fingers two to five, and split-foot. It has been described in four males belonging to two generations of the same family. X-linked recessive inheritance is suggested, but autosomal dominant transmission cannot be excluded.","definition_xrefs":["Orphanet:1122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"ulnar hypoplasia-split foot syndrome","secondary_identifiers":["GARD:5400","MEDGEN:333256","MESH:C536936","OMIM:314360","UMLS:C1839123"],"synonyms":[{"name":"Van De Berghe Dequeker syndrome","type":"related"},{"name":"Van den Berghe-Dequecker syndrome","type":"exact"},{"name":"complete absence of the ulna and of fingers 2 to 5, together with lobster-claw deformity of the feet","type":"related"},{"name":"familial ulnar aplasia and lobster claw syndrome","type":"related"},{"name":"severe ulnar aplasia and lobster claw feet","type":"related"},{"name":"ulnar hypoplasia lobster claw deformity of feet","type":"related"},{"name":"ulnar hypoplasia with lobster-claw deformity of feet","type":"related"},{"name":"ulnar hypoplasia-lobster-claw deformity of feet syndrome","type":"exact"}],"termid":"MONDO:0010750","xrefs":{"Monarch":{"xref_id":"0010750"}}}


id: PBO:0047045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 107 member B","termid":"PBO:0047045"}


id: GO:0050903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of an integrin-dependent strong adhesive bond between leukocytes and blood vessel endothelial cells which is dependent on prior activation of the leukocyte and leads to the firm attachment of the leukocyte to the endothelial surface, typically the third step in cellular extravasation.","definition_xrefs":["PMID:8600538","PMID:14708592","PMID:14680625","ISBN:0781735149","PMID:7507411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte activation-dependent arrest","termid":"GO:0050903"}


id: PBO:0083066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrosphingosine phosphate lyase; regulates intracellular levels of sphingolipid long-chain base phosphates (LCBPs), degrades phosphorylated long chain bases, prefers C16 dihydrosphingosine-l-phosphate as a substrate","termid":"PBO:0083066"}


id: GO:0052655
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110237],"is_not":false,"summary":null,"term":"GO:0052655"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-valine = 3-methyl-2-oxobutanoic acid + L-glutamatic acid.","definition_xrefs":["RHEA:24813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain-amino-acid transaminase activity","termid":"GO:0004084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"L-valine-2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01214","MetaCyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN"],"synonyms":[{"name":"L-valine aminotransferase activity","type":"exact"}],"termid":"GO:0052655","terms_by_termid":{"GO:0052655":null}}


id: GO:0047295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate = 2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate + diphosphate.","definition_xrefs":["PMID:16494480","RHEA:18109","PMID:15356000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"geranylgeranylglycerol-phosphate geranylgeranyltransferase activity","secondary_identifiers":["EC:2.5.1.42","MetaCyc:2.5.1.42-RXN","KEGG_REACTION:R04520"],"synonyms":[{"name":"(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase activity","type":"exact"},{"name":"DGGGP synthase activity","type":"exact"},{"name":"geranylgeranyl diphosphate:sn-3-O-(geranylgeranyl)glycerol 1-phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyloxyglycerol phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyltransferase II","type":"related"}],"termid":"GO:0047295"}


id: PBO:0074927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 95","termid":"PBO:0074927"}


id: MONDO:0008781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A juvenile amyotrophic lateral sclerosis that is slowly progressive with concomitantly progressive dementia.","definition_xrefs":["DOID:0110067","PMID:5692341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile amyotrophic lateral sclerosis","termid":"MONDO:0017593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile amyotrophic lateral sclerosis with dementia","secondary_identifiers":["OMIM:205200","UMLS:C1859806","MESH:C565956","MEDGEN:395347"],"synonyms":[{"name":"ALS-dementia Complex","type":"related"},{"name":"ALS-dementia complex","type":"exact"},{"name":"amyotrophic lateral sclerosis, juvenile, with dementia","type":"related"}],"termid":"MONDO:0008781","xrefs":{"Monarch":{"xref_id":"0008781"}}}


id: PBO:0042775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 85","termid":"PBO:0042775"}


id: MONDO:0021181
data:
  {"annotated_genes":["SJAG_03204","SJAG_03712","SJAG_02091","SJAG_01732","SJAG_00108","SJAG_02453","SJAG_01466","SJAG_02839","SJAG_03115","SJAG_02093"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85872,85873,85871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[86078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009206"},{"annotations":[85876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[85736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[84965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[87032,87031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008559"},{"annotations":[85675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010518"}]},"cv_name":"mondo","definition":"Hemorrhagic and thrombotic disorders that occur as a consequence of inherited abnormalities in blood coagulation.","definition_xrefs":["MESH:D025861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_01466":null,"SJAG_01732":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02453":null,"SJAG_02839":null,"SJAG_03115":null,"SJAG_03204":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"inherited blood coagulation disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:183654","GARD:20319","MEDGEN:163105","UMLS:C0852077","DOID:2214"],"synonyms":[{"name":"coagulation disorder, hereditary","type":"exact"},{"name":"coagulation disorder, inherited","type":"exact"},{"name":"coagulation disorders, hereditary","type":"exact"},{"name":"coagulation disorders, inherited","type":"exact"},{"name":"hereditary blood coagulation disease","type":"exact"},{"name":"hereditary blood coagulation disorders","type":"exact"},{"name":"hereditary coagulation disorder","type":"exact"},{"name":"hereditary coagulation disorders","type":"exact"},{"name":"inherited blood coagulation disease","type":"related"},{"name":"inherited blood coagulation disorders","type":"exact"},{"name":"inherited coagulation disorder","type":"exact"},{"name":"inherited coagulation disorders","type":"exact"},{"name":"rare genetic coagulation disorder","type":"exact"}],"termid":"MONDO:0021181","terms_by_termid":{"MONDO:0008559":null,"MONDO:0009206":null,"MONDO:0010518":null,"MONDO:0011997":null,"MONDO:0012465":null,"MONDO:0014885":null,"MONDO:0018794":null},"xrefs":{"Monarch":{"xref_id":"0021181"}}}


id: PBO:0087170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II largest subunit B220; part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime","termid":"PBO:0087170"}


id: GO:0016546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male fly licks the genitalia of a stationary female fly with his proboscis. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, proboscis-mediated licking","synonyms":[{"name":"male courtship behavior, licking","type":"related"},{"name":"male courtship behaviour, licking","type":"related"},{"name":"male courtship behaviour, proboscis-mediated licking","type":"exact"}],"termid":"GO:0016546"}


id: MONDO:0012671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 3","secondary_identifiers":["MESH:C566949","MEDGEN:409870","DOID:0111430","OMIM:611456","UMLS:C1969617"],"synonyms":[{"name":"ETM3","type":"exact"},{"name":"essential tremor, hereditary, 3","type":"exact"},{"name":"tremor, hereditary essential, 3","type":"exact"}],"termid":"MONDO:0012671","xrefs":{"Monarch":{"xref_id":"0012671"}}}


id: PBO:0063119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 4 pseudogene 1","termid":"PBO:0063119"}


id: PBO:0054593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1996","termid":"PBO:0054593"}


id: PBO:0075273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 26","termid":"PBO:0075273"}


id: PBO:0088897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glycoside hydrolase, family 5","termid":"PBO:0088897"}


id: PBO:0001090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glycine","termid":"PBO:0001090"}


id: PBO:0070107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 21 pseudogene","termid":"PBO:0070107"}


id: GO:1900138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase A2 activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipase activity","termid":"GO:0010519"},{"relation_name":"is_a","term_name":"regulation of phospholipase A2 activity","termid":"GO:0032429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipase A2 activity","synonyms":[{"name":"down regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"down regulation of lecithinase A activity","type":"exact"},{"name":"down regulation of phosphatidase activity","type":"related"},{"name":"down regulation of phosphatidolipase activity","type":"exact"},{"name":"down regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"down regulation of phospholipase A","type":"related"},{"name":"down regulation of phospholipase A2 activity","type":"exact"},{"name":"down regulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"down-regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"down-regulation of lecithinase A activity","type":"exact"},{"name":"down-regulation of phosphatidase activity","type":"related"},{"name":"down-regulation of phosphatidolipase activity","type":"exact"},{"name":"down-regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"down-regulation of phospholipase A","type":"related"},{"name":"down-regulation of phospholipase A2 activity","type":"exact"},{"name":"down-regulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"downregulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"downregulation of lecithinase A activity","type":"exact"},{"name":"downregulation of phosphatidase activity","type":"related"},{"name":"downregulation of phosphatidolipase activity","type":"exact"},{"name":"downregulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"downregulation of phospholipase A","type":"related"},{"name":"downregulation of phospholipase A2 activity","type":"exact"},{"name":"downregulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"inhibition of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"inhibition of lecithinase A activity","type":"narrow"},{"name":"inhibition of phosphatidase activity","type":"related"},{"name":"inhibition of phosphatidolipase activity","type":"narrow"},{"name":"inhibition of phosphatidylcholine 2-acylhydrolase activity","type":"narrow"},{"name":"inhibition of phospholipase A","type":"related"},{"name":"inhibition of phospholipase A2 activity","type":"narrow"},{"name":"inhibition of secreted phospholipase A2 activity","type":"narrow"},{"name":"negative regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"negative regulation of lecithinase A activity","type":"exact"},{"name":"negative regulation of phosphatidase activity","type":"related"},{"name":"negative regulation of phosphatidolipase activity","type":"exact"},{"name":"negative regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"negative regulation of phospholipase A","type":"related"},{"name":"negative regulation of secreted phospholipase A2 activity","type":"narrow"}],"termid":"GO:1900138"}


id: MONDO:0007563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epistaxis, hereditary (obsolete MONDO:0007563)","termid":"MONDO:0007563","xrefs":{"Monarch":{"xref_id":"0007563"}}}


id: GO:0034567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chromate = chromium (III).","definition_xrefs":["PMID:22558308","UM-BBD_reactionID:r0884","PMID:14766567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"chromate reductase activity","termid":"GO:0034567"}


id: PBO:0045937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A2","termid":"PBO:0045937"}


id: PBO:0071337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 1","termid":"PBO:0071337"}


id: PBO:0063952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate 4-kinase type 2 alpha","termid":"PBO:0063952"}


id: PBO:0042900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 4","termid":"PBO:0042900"}


id: PBO:0068220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 527","termid":"PBO:0068220"}


id: PBO:0083485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VHS3/YOR054C","termid":"PBO:0083485"}


id: GO:0034596
data:
  {"annotated_genes":["SJAG_02706","SJAG_00880"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77943,73540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of the 4-phosphate group of a phosphatidylinositol phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol phosphate 4-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1676133","Reactome:R-HSA-1675988","Reactome:R-HSA-1676124","Reactome:R-HSA-8849969"],"synonyms":[{"name":"PI(4)P-phosphatase activity","type":"exact"},{"name":"PI4P-phosphatase activity","type":"exact"},{"name":"PtdIns4P-phosphatase activity","type":"exact"},{"name":"inositol 4-phosphatase","type":"narrow"},{"name":"phosphoinositide 4-phosphatase activity","type":"exact"}],"termid":"GO:0034596","terms_by_termid":{"GO:0043812":null}}


id: PBO:0042891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor B","termid":"PBO:0042891"}


id: GO:2000724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"is_a","term_name":"regulation of cardiac vascular smooth muscle cell differentiation","termid":"GO:2000722"},{"relation_name":"positively_regulates","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"positive regulation of heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000724"}


id: GO:0050809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to diazepam, one of the most widely used benzodiazepine drugs. It is used as an anti-anxiety-hypnotic agent and has the proprietary name Valium.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"diazepam binding","synonyms":[{"name":"Valium binding","type":"exact"},{"name":"diazepam binding inhibitor activity","type":"related"}],"termid":"GO:0050809"}


id: PBO:0047396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 36","termid":"PBO:0047396"}


id: GO:0060536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage morphogenesis","termid":"GO:0060536"}


id: MONDO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive papillary serous epithelial neoplasm usually arising from the ovary.","definition_xrefs":["NCIT:C4181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous surface papilloma","secondary_identifiers":["DOID:2614","ICDO:8461/0","MEDGEN:90770","UMLS:C0334360"],"synonyms":[{"name":"serous surface papilloma","type":"exact"},{"name":"serous surface papilloma (morphologic abnormality)","type":"exact"},{"name":"serous surface papilloma NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002362","xrefs":{"Monarch":{"xref_id":"0002362"}}}


id: MONDO:0017105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glioependymal/ependymal cyst is a rare central nervous system malformation defined as a subarachnoid, supratentorial, interventricular or intraspinal, sometimes intracerebral or intramedullar cyst with an internal ependymal lining, possibly surrounded by glial tissue. It may be an incidental finding or may present at different ages with clinical features depending on its size and location. It may distort adjacent brain structures and cause macrocephaly, ventriculomegaly, hydrocephalus, focal neurological signs and other signs and symptoms. In some cases, it is associated with other cerebral malformations (e.g. corpus callosum agenesis, polymicrogyria, heterotopias).","definition_xrefs":["Orphanet:269197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"glioependymal/ependymal cyst","secondary_identifiers":["GARD:20989"],"termid":"MONDO:0017105","xrefs":{"Monarch":{"xref_id":"0017105"}}}


id: MONDO:0100470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coughing, wheezing, or shortness of breath that is triggered by allergens, infection, or other irritants.","definition_xrefs":["NCIT:C113673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive airway disease","secondary_identifiers":["UMLS:C3714497","SCTID:991000119106","MEDGEN:811342"],"synonyms":[{"name":"hyperactive airway disease","type":"exact"},{"name":"reactive airway disease (AQ)","type":"exact"}],"termid":"MONDO:0100470","xrefs":{"Monarch":{"xref_id":"0100470"}}}


id: MONDO:0014039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive external ophthalmoplegia-myopathy-emaciation syndrome is a rare mitochondrial oxidative phosphorylation disorder due to nuclear DNA anomalies characterized by progressive external ophthalmoplegia without diplopia, cerebellar atrophy, proximal skeletal muscle weakness with generalized muscle wasting, profound emaciation, respiratory failure, spinal deformity and facial muscle weakness (manifesting with ptosis, dysphonia, dysphagia and nasal speech). Intellectual disability, gastrointestinal symptoms (e.g. nausea, abdominal fullness, and loss of appetite), dilated cardiomyopathy and renal colic have also been reported.","definition_xrefs":["Orphanet:352447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 11","secondary_identifiers":["UMLS:C3554462","DOID:0080129","MEDGEN:767376","OMIM:615084","GARD:17517"],"synonyms":[{"name":"MGME1 mitochondrial DNA depletion syndrome","type":"exact"},{"name":"MTDPS11","type":"related"},{"name":"PEO-myopathy-emaciation syndrome","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 11","type":"exact"},{"name":"mitochondrial DNA depletion syndrome caused by mutation in MGME1","type":"exact"},{"name":"mitochondrial DNA depletion syndrome type 11","type":"exact"},{"name":"mitochondrial DNA maintenance syndrome due to MGME1 deficiency","type":"exact"},{"name":"mtDNA maintenance syndrome due to MGME1 deficiency","type":"exact"},{"name":"progressive external ophthalmoplegia-myopathy-emaciation syndrome","type":"related"}],"termid":"MONDO:0014039","xrefs":{"Monarch":{"xref_id":"0014039"}}}


id: GO:0052517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death in the symbiont, where programmed cell death proceeds by a non-apoptotic pathway. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont non-apoptotic programmed cell death (obsolete GO:0052517)","synonyms":[{"name":"positive regulation by organism of symbiont non-apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052517"}


id: PBO:0062352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily M member 3 pseudogene","termid":"PBO:0062352"}


id: GO:0080010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["PMID:18450450"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0080010)","synonyms":[{"name":"regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0080010"}


id: MONDO:0004458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bladder adenocarcinoma","termid":"MONDO:0002751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder mixed adenocarcinoma","secondary_identifiers":["UMLS:C1511192","MEDGEN:267372","DOID:8096","NCIT:C39839"],"termid":"MONDO:0004458","xrefs":{"Monarch":{"xref_id":"0004458"}}}


id: MONDO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly","secondary_identifiers":["SCTID:28740008","MEDGEN:82713","UMLS:C0265535","icd11.foundation:20816218"],"synonyms":[{"name":"trigonocephalia","type":"related"},{"name":"trigonocephalus","type":"related"},{"name":"trigonocephaly","type":"exact"},{"name":"trigonocephaly, isolated","type":"related"}],"termid":"MONDO:0000156","xrefs":{"Monarch":{"xref_id":"0000156"}}}


id: FYPO:0007247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic G2 DNA damage checkpoint does not occur during a cellular response to ionizing radiation. Normally, the mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah","GO:0007095","PMID:9042863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic G2 DNA damage checkpoint","termid":"FYPO:0004259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"abolished mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"abolished G2 DNA damage checkpoint during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint activation during cellular response to ionizing radiation","type":"related"},{"name":"abolished mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"abolished mitotic cell cycle G2/M transition DNA damage checkpoint during cellular response to ionizing radiation","type":"exact"},{"name":"mitotic G2 DNA damage checkpoint abolished during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0007247"}


id: PBO:0074106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC28A2 antisense RNA 1","termid":"PBO:0074106"}


id: PBO:0026645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_oxidized_DNA_binding","termid":"PBO:0026645"}


id: GO:0043405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of MAP kinase activity.","definition_xrefs":["GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of MAP kinase activity","synonyms":[{"name":"Regulation of MAPK activity","type":"exact"},{"name":"regulation of mitogen activated protein kinase activity","type":"exact"},{"name":"regulation of mitogen-activated protein kinase activity","type":"exact"}],"termid":"GO:0043405"}


id: PBO:0043406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 3","termid":"PBO:0043406"}


id: PBO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.78","termid":"PBO:0001364"}


id: PBO:0075129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U4/U6.U5 subunit 27","termid":"PBO:0075129"}


id: PBO:0047974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 divergent transcript","termid":"PBO:0047974"}


id: MONDO:0021658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular ectasia","secondary_identifiers":["NCIT:C45481","MEDGEN:8080","UMLS:C0002959"],"synonyms":[{"name":"vascular ectasia","type":"exact"}],"termid":"MONDO:0021658","xrefs":{"Monarch":{"xref_id":"0021658"}}}


id: FYPO:0005814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends of microtubules does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to microtubule plus-end","synonyms":[{"name":"abolished protein localisation to microtubule plus-end","type":"exact"},{"name":"abolished protein localization to microtubule plus end","type":"exact"},{"name":"abolished protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule plus-end during vegetative growth","type":"exact"},{"name":"protein localization to microtubule plus-end abolished","type":"exact"}],"termid":"FYPO:0005814"}


id: GO:0009099
data:
  {"annotated_genes":["SJAG_03985","SJAG_04098","SJAG_00396","SJAG_04149","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58403,63675,75833,76556,79716],"is_not":false,"summary":null,"term":"GO:0009099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of valine, 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine metabolic process","termid":"GO:0006573"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-valine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"secondary_identifiers":["MetaCyc:VALSYN-PWY"],"synonyms":[{"name":"valine anabolism","type":"exact"},{"name":"valine biosynthesis","type":"exact"},{"name":"valine formation","type":"exact"},{"name":"valine synthesis","type":"exact"}],"termid":"GO:0009099","terms_by_termid":{"GO:0009099":null}}


id: PBO:0061583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 3","termid":"PBO:0061583"}


id: PBO:0049415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2E, pseudogene","termid":"PBO:0049415"}


id: PBO:0068774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 11, pseudogene","termid":"PBO:0068774"}


id: MONDO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hiatus hernia","termid":"MONDO:0007721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"displacement of cardia through esophageal hiatus","secondary_identifiers":["DOID:12641","ICD10CM:Q40.1","MEDGEN:510622","SCTID:47028006","ICD9:750.6","UMLS:C0158674"],"synonyms":[{"name":"congenital hiatus hernia","type":"exact"}],"termid":"MONDO:0001562","xrefs":{"Monarch":{"xref_id":"0001562"}}}


id: PBO:0055885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit C","termid":"PBO:0055885"}


id: GO:0018238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-1-carboxyethyl-L-lysine.","definition_xrefs":["RESID:AA0115"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine carboxyethylation (obsolete GO:0018238)","synonyms":[{"name":"protein amino acid carboxyethylation","type":"exact"}],"termid":"GO:0018238"}


id: FYPO:0008274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which glutamate biosynthesis is abnormal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased glutamate biosynthesis","termid":"FYPO:0008274"}


id: PBO:0110428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 3","termid":"PBO:0110428"}


id: MONDO:1010971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, llama","secondary_identifiers":["OMIA:000312-9844"],"termid":"MONDO:1010971","xrefs":{"Monarch":{"xref_id":"1010971"}}}


id: PBO:0034298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_distributary_of","termid":"PBO:0034298"}


id: PBO:0063297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 4","termid":"PBO:0063297"}


id: PBO:0031451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-perforated_nuclear_envelope","termid":"PBO:0031451"}


id: PBO:0030118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_zinc_ion","termid":"PBO:0030118"}


id: SO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001051 nested_region (obsolete SO:0001051)","termid":"SO:0001051"}


id: MONDO:1011702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal pancytopenia, non-human animal","secondary_identifiers":["OMIA:001539"],"termid":"MONDO:1011702","xrefs":{"Monarch":{"xref_id":"1011702"}}}


id: GO:0035905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ascending aorta over time, from its initial formation to the mature structure. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["GOC:dgh","GOC:bf","MA:0002570","UBERON:0001496","Wikipedia:Ascending_aorta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending aorta development","termid":"GO:0035905"}


id: MONDO:0011226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the POU4F3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 15","secondary_identifiers":["DOID:0110546","GARD:18109","UMLS:C1865366","MESH:C566545","MEDGEN:355451","OMIM:602459"],"synonyms":[{"name":"DFNA15","type":"narrow"},{"name":"POU4F3 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 15","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 15","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in POU4F3","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 15","type":"narrow"},{"name":"deafness, autosomal dominant 15","type":"narrow"},{"name":"deafness, autosomal dominant type 15","type":"narrow"}],"termid":"MONDO:0011226","xrefs":{"Monarch":{"xref_id":"0011226"}}}


id: PBO:0048855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A2","termid":"PBO:0048855"}


id: FYPO:0002069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell has a nucleus in an abnormal location. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning","termid":"FYPO:0000517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized nucleus","synonyms":[{"name":"abnormal nucleus location","type":"exact"},{"name":"abnormal nucleus position","type":"exact"},{"name":"displaced nucleus","type":"exact"},{"name":"mislocalised nucleus","type":"exact"},{"name":"misplaced nuclei","type":"exact"},{"name":"misplaced nucleus","type":"exact"},{"name":"nuclear displacement","type":"exact"},{"name":"nuclear position: abnormal","type":"related"}],"termid":"FYPO:0002069"}


id: PATO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being convex on both sides or surface.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/biconvexity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex","termid":"PATO:0001355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biconvex","secondary_identifiers":["Image:http\\://www.thefreedictionary.com/_/viewer.aspx?path=hm&name=A4bicovx"],"termid":"PATO:0002040"}


id: PBO:0048301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAPDH divergent transcript","termid":"PBO:0048301"}


id: PBO:0067317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 403, pseudogene","termid":"PBO:0067317"}


id: GO:0071714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of icosanoids from one side of a membrane to the other.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"icosanoid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-428990"],"synonyms":[{"name":"eicosanoid transmembrane transporter activity","type":"exact"}],"termid":"GO:0071714"}


id: GO:0005897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-9; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-9 receptor, whereas the beta chain is shared with the receptors for several other interleukins.","definition_xrefs":["GOC:mah","PMID:10642536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-9 receptor complex","synonyms":[{"name":"IL-9 receptor complex","type":"exact"}],"termid":"GO:0005897"}


id: GO:0061730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to C-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["GOC:dph","GOC:kmv","PMID:18329362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"C-rich strand telomeric DNA binding","termid":"GO:0061730"}


id: GO:0070179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid. D-serine is often formed by racemization of L-serine.","definition_xrefs":["GOC:mah","GOC:jsg","CHEBI:16523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid biosynthetic process","termid":"GO:0046437"},{"relation_name":"is_a","term_name":"D-serine metabolic process","termid":"GO:0070178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-serine biosynthetic process","synonyms":[{"name":"D-serine anabolism","type":"exact"},{"name":"D-serine biosynthesis","type":"exact"},{"name":"D-serine formation","type":"exact"},{"name":"D-serine synthesis","type":"exact"}],"termid":"GO:0070179"}


id: PBO:0044034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 3 Y-linked","termid":"PBO:0044034"}


id: PBO:0058954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKNK1 antisense RNA 1","termid":"PBO:0058954"}


id: PBO:0090158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission protein Fis1","termid":"PBO:0090158"}


id: MONDO:0958190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bradyopsia","termid":"MONDO:0012033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"prolonged electroretinal response suppression 2","secondary_identifiers":["DOID:0070364","UMLS:C5830452","OMIM:620344","MEDGEN:1841088"],"termid":"MONDO:0958190","xrefs":{"Monarch":{"xref_id":"0958190"}}}


id: PBO:0078103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 11","termid":"PBO:0078103"}


id: PBO:0086009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0086009"}


id: PBO:0052029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jupiter microtubule associated homolog 2","termid":"PBO:0052029"}


id: PBO:0039265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 16 family member A1","termid":"PBO:0039265"}


id: SO:1001261
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of a mature mRNA transcript, modified before translation or during translation, usually by special cis-acting signals.","direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded","termid":"SO:0000881"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_mRNA","synonyms":[{"name":"recoded mRNA","type":"exact"}],"termid":"SO:1001261"}


id: GO:0043589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skin are generated and organized. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.","definition_xrefs":["GOC:jl","UBERON:0002097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin morphogenesis","termid":"GO:0043589"}


id: PBO:0072069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 7","termid":"PBO:0072069"}


id: PBO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc11","termid":"PBO:0000805"}


id: MONDO:0859367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 96","secondary_identifiers":["MEDGEN:1824076","OMIM:620228","UMLS:C5774303"],"termid":"MONDO:0859367","xrefs":{"Monarch":{"xref_id":"0859367"}}}


id: PBO:0064379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 1","termid":"PBO:0064379"}


id: MONDO:0016926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Geleophysic dysplasia (obsolete MONDO:0016926)","termid":"MONDO:0016926","xrefs":{"Monarch":{"xref_id":"0016926"}}}


id: MONDO:0009080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand - split foot - deafness is an extremely rare genetic syndrome reported in a few families to date and characterized clinically by split hand/split foot malformation (SHFM) and mild to moderate sensorineural hearing loss, sometimes associated with cleft palate and intellectual deficit.","definition_xrefs":["Orphanet:71271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand-foot malformation 1 with sensorineural hearing loss","secondary_identifiers":["OMIM:220600","DOID:0090024","GARD:16686","MESH:C565647","SCTID:723611008","UMLS:C1857344","MEDGEN:347431"],"synonyms":[{"name":"SHFM1D","type":"exact"},{"name":"congenital deafness with split hands and feet","type":"exact"},{"name":"deafness, congenital, with split hands and feet","type":"related"},{"name":"split hand-foot malformation 1 with sensorineural hearing loss","type":"exact"},{"name":"split hand-split foot-deafness syndrome","type":"related"},{"name":"split-hand/foot malformation 1 with sensorineural hearing loss","type":"exact"},{"name":"split-hand/foot malformation 1 with sensorineural hearing loss, autosomal recessive","type":"related"}],"termid":"MONDO:0009080","xrefs":{"Monarch":{"xref_id":"0009080"}}}


id: PBO:0084847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L16 ribosomal protein; synthetic lethality with hac1 mutation suggests a possible role in synthesis of precursors for protein glycosylation","termid":"PBO:0084847"}


id: MONDO:0010599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulomas, congenital cerebral","secondary_identifiers":["OMIM:306300","MEDGEN:336683","MESH:C537294","UMLS:C1844406"],"synonyms":[{"name":"congenital cerebral granulomas","type":"related"},{"name":"granulomas, congenital cerebral","type":"exact"}],"termid":"MONDO:0010599","xrefs":{"Monarch":{"xref_id":"0010599"}}}


id: FYPO:0005353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier is normal (i.e. indistinguishable from wild type). Note that the RTS1 barrier usually occurs in the mating type locus, but might be assayed at ectopic loci to maximise the distance that a restarted fork travels.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal replication fork arrest at RTS1 barrier","synonyms":[{"name":"normal replication fork arrest at mating-type locus","type":"related"},{"name":"normal replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005353"}


id: PBO:0065808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3B, member RAS oncogene family","termid":"PBO:0065808"}


id: MOD:00791
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamic acid with one (18)O.","definition_xrefs":["PubMed:8382902","Unimod:366#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deamidated L-glutamine","termid":"MOD:00685"},{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated L-glutamine","synonyms":[{"name":"Deamidated:18O(1)","type":"related"},{"name":"Deamidation in presence of O18","type":"related"}],"termid":"MOD:00791"}


id: PBO:0047293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2","termid":"PBO:0047293"}


id: PBO:0065776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamylated RFamide peptide","termid":"PBO:0065776"}


id: SO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic region that has an attribute.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_domain","synonyms":[{"name":"intron domain","type":"exact"}],"termid":"SO:0001014"}


id: PBO:0045014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disco interacting protein 2 homolog C","termid":"PBO:0045014"}


id: FYPO:0006991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a normal (i.e. indistinguishable from wild type) portion of the chromosome in regions containing protein-coding genes.","definition_xrefs":["GO:0031509","PomBase:mah","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal spatial extent of heterochromatin assembly at protein coding gene","synonyms":[{"name":"normal spatial extent of heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"normal spatial extent of heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0006991"}


id: PBO:0061686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP153 antisense RNA 1","termid":"PBO:0061686"}


id: GO:0045293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that posttranscriptionally catalyzes insertion, deletion or substitution of nucleotides at multiple sites within nascent mRNA transcripts to produce mature mRNAs in eukaryotes.","definition_xrefs":["PMID:12139607","PMID:24316715","PMID:11564867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mRNA editing complex","synonyms":[{"name":"editosome","type":"exact"}],"termid":"GO:0045293"}


id: PBO:0057514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 632","termid":"PBO:0057514"}


id: MONDO:0004300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intracortical osteogenic sarcoma (obsolete MONDO:0004300)","termid":"MONDO:0004300","xrefs":{"Monarch":{"xref_id":"0004300"}}}


id: PBO:0080815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 5","termid":"PBO:0080815"}


id: PBO:0111462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase complex catalytic subunit Trm61","termid":"PBO:0111462"}


id: FYPO:0003441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to actin cytoskeleton during vegetative growth","synonyms":[{"name":"normal protein localisation to actin cytoskeleton during vegetative growth","type":"exact"},{"name":"normal protein localization to actin cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003441"}


id: GO:0050414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoyl-L-aspartate + H2O = N-formyl-L-aspartate + NH3.","definition_xrefs":["EC:3.5.3.5","MetaCyc:FORMIMINOASPARTATE-DEIMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formimidoylaspartate deiminase activity","secondary_identifiers":["RHEA:13661"],"synonyms":[{"name":"N-formimidoyl-L-aspartate iminohydrolase activity","type":"related"},{"name":"formiminoaspartate deiminase activity","type":"exact"}],"termid":"GO:0050414"}


id: PBO:0002748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn502","termid":"PBO:0002748"}


id: GO:0051420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to nebulette, a 107 kDa protein associated with the I-Z-I complex of cardiac myofibrils. It shows a high degree of homology with skeletal muscle nebulin.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete nebulette binding (obsolete GO:0051420)","synonyms":[{"name":"nebulette binding","type":"exact"}],"termid":"GO:0051420"}


id: GO:1905096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apolipoprotein A-I-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bc","GOC:BHF","GOC:BHF_miRNA","PMID:25084135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of apolipoprotein A-I-mediated signaling pathway","termid":"GO:1905094"},{"relation_name":"positively_regulates","term_name":"apolipoprotein A-I-mediated signaling pathway","termid":"GO:0038027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"activation of apolipoprotein A-I-mediated signaling pathway","type":"narrow"},{"name":"activation of apolipoprotein A-I-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"up regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"up regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"up-regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"up-regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"upregulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"upregulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:1905096"}


id: MONDO:0000579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coronin-1A deficiency (obsolete MONDO:0000579)","termid":"MONDO:0000579","xrefs":{"Monarch":{"xref_id":"0000579"}}}


id: GO:1904570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine incorporation.","definition_xrefs":["GOC:TermGenie","PMID:21685449","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of selenocysteine incorporation","termid":"GO:1904569"},{"relation_name":"negatively_regulates","term_name":"selenocysteine incorporation","termid":"GO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of selenocysteine incorporation","synonyms":[{"name":"down regulation of selenocysteine incorporation","type":"exact"},{"name":"down-regulation of selenocysteine incorporation","type":"exact"},{"name":"downregulation of selenocysteine incorporation","type":"exact"},{"name":"inhibition of selenocysteine incorporation","type":"narrow"}],"termid":"GO:1904570"}


id: PBO:0005897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Isoleucine, mitochondrial","termid":"PBO:0005897"}


id: GO:0035282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis.","definition_xrefs":["PMID:9706689","PMID:10611687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"segmentation","secondary_identifiers":["Wikipedia:Segmentation_(biology)"],"termid":"GO:0035282"}


id: PBO:0089774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase","termid":"PBO:0089774"}


id: PR:Q9P7Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sin1 gene.","definition_xrefs":["UniProtKB:Q9P7Y9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-activated map kinase-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.02c","synonyms":[{"name":"SAPK-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sin1","type":"exact"}],"termid":"PR:Q9P7Y9"}


id: PBO:0089493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ell binding protein Ebp1","termid":"PBO:0089493"}


id: PR:O74653
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pob1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.04c","synonyms":[{"name":"BOI protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pob1","type":"exact"}],"termid":"PR:O74653"}


id: GO:2000195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of female gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gonad development","termid":"GO:1905940"},{"relation_name":"is_a","term_name":"regulation of female gonad development","termid":"GO:2000194"},{"relation_name":"negatively_regulates","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female gonad development","synonyms":[{"name":"negative regulation of ovarian development","type":"exact"},{"name":"negative regulation of ovary development","type":"exact"}],"termid":"GO:2000195"}


id: MONDO:0010452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the DLG3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 90","secondary_identifiers":["OMIM:300850","UMLS:C3275443","DOID:0112041","MEDGEN:477074","GARD:22690"],"synonyms":[{"name":"DLG3 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX90","type":"related"},{"name":"intellectual developmental disorder, X-linked 90, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 90","type":"exact"},{"name":"intellectual disability, X-linked type 90","type":"exact"},{"name":"mental retardation, X-linked 90","type":"related"},{"name":"mental retardation, X-linked type 90","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in DLG3","type":"exact"}],"termid":"MONDO:0010452","xrefs":{"Monarch":{"xref_id":"0010452"}}}


id: GO:1990275
data:
  {"annotated_genes":["SJAG_04599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70663],"is_not":false,"summary":null,"term":"GO:1990275"}]},"cv_name":"molecular_function","definition":"Binding to a preribosome.","definition_xrefs":["PMID:22735702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"preribosome binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990275","terms_by_termid":{"GO:1990275":null}}


id: PBO:0040283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 3","termid":"PBO:0040283"}


id: PBO:0039172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 4","termid":"PBO:0039172"}


id: GO:0106172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a COPI-coated endocytic vesicle.","definition_xrefs":["PMID:29535154","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"COPI-coated vesicle lumen","termid":"GO:0106172"}


id: GO:0048642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle tissue development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle tissue development","termid":"GO:0045843"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue development","synonyms":[{"name":"down regulation of skeletal muscle development","type":"exact"},{"name":"down-regulation of skeletal muscle development","type":"exact"},{"name":"downregulation of skeletal muscle development","type":"exact"},{"name":"inhibition of skeletal muscle development","type":"narrow"}],"termid":"GO:0048642"}


id: GO:0045223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"CD4 biosynthetic process","termid":"GO:0045222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4 production","synonyms":[{"name":"regulation of CD4 anabolism","type":"exact"},{"name":"regulation of CD4 biosynthesis","type":"exact"},{"name":"regulation of CD4 biosynthetic process","type":"exact"},{"name":"regulation of CD4 formation","type":"exact"},{"name":"regulation of CD4 synthesis","type":"exact"}],"termid":"GO:0045223"}


id: GO:0062066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PSII associated light-harvesting complex II.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II binding","termid":"GO:0062066"}


id: GO:0061208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"}


id: PR:O94446
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone acetyltransferase KAT5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.12c","secondary_identifiers":["UniProtKB:O94446"],"synonyms":[{"name":"Spom972h-KAT5","type":"exact"}],"termid":"PR:O94446"}


id: FYPO:0003192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to nucleus during mitosis","synonyms":[{"name":"abolished protein localisation to nucleus during mitosis","type":"exact"},{"name":"abolished protein localization to nucleus during mitosis during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during mitotic M phase","type":"related"},{"name":"abolished protein localization to nucleus during mitotic M-phase","type":"related"},{"name":"abolished protein localization to nucleus during mitotic nuclear division","type":"exact"},{"name":"nuclear exclusion during mitosis","type":"related"},{"name":"nuclear protein exclusion during mitosis","type":"related"},{"name":"protein localization to nucleus abolished during mitosis","type":"exact"}],"termid":"FYPO:0003192"}


id: PR:000044588
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the sid4 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation protein sid4 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"Spom-sid4","type":"exact"}],"termid":"PR:000044588"}


id: GO:1905072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cardiac jelly over time, from its formation to the mature structure. The cardiac jelly is an acellular gelatinous matrix secreted by the myocardium and plays a central role in the septation of the heart.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:10645959","GO_REF:0000094","GOC:rl","PMID:16314491","PMID:19703439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac jelly development","synonyms":[{"name":"heart cardiac jelly development","type":"exact"}],"termid":"GO:1905072"}


id: PBO:0051247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-78-1 (pseudogene)","termid":"PBO:0051247"}


id: PBO:0028680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_mating-type_region_heterochromatin","termid":"PBO:0028680"}


id: MONDO:0024456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An iridogoniodysgenesis that results from alterations in the forkhead transcription factor gene (FOXC1)","direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"},{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"},{"relation_name":"is_a","term_name":"FOXC1-related anterior segment dysgenesis","termid":"MONDO:0100235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 3","secondary_identifiers":["GARD:2978","MEDGEN:355748","OMIM:601631","UMLS:C1866560","DOID:0080608","MESH:C535535"],"synonyms":[{"name":"ASGD3","type":"exact"},{"name":"FOXC1 iridogoniodysgenesis","type":"exact"},{"name":"IGDA","type":"exact"},{"name":"IGDA syndrome","type":"exact"},{"name":"IRID1","type":"exact"},{"name":"anterior segment dysgenesis 3","type":"exact"},{"name":"anterior segment dysgenesis 3, multiple subtypes","type":"exact"},{"name":"glaucoma iridogoniodysgenesia","type":"related"},{"name":"glaucoma iridogoniodysplasia, familial","type":"related"},{"name":"iridogoniodysgenesis anomaly, autosomal dominant","type":"exact"},{"name":"iridogoniodysgenesis caused by mutation in FOXC1","type":"exact"},{"name":"iridogoniodysgenesis type 1","type":"exact"},{"name":"iridogoniodysgenesis, type 1","type":"exact"},{"name":"iris hypoplasia with glaucoma","type":"related"}],"termid":"MONDO:0024456","xrefs":{"Monarch":{"xref_id":"0024456"}}}


id: GO:0007344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of two pronuclei in a fertilized egg to fuse and produce a single zygotic genome.","definition_xrefs":["ISBN:087969307X","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronuclear fusion","termid":"GO:0007344"}


id: PBO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.119","termid":"PBO:0000887"}


id: GO:0090139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which mitochondrial chromosomal DNA and associated proteins organize into a compact, orderly structure.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial chromosome packaging","synonyms":[{"name":"mitochondrial DNA packaging","type":"exact"}],"termid":"GO:0090139"}


id: GO:0019668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of amino acids; in these reactions, one amino acid is oxidised (acts as an electron donor) and a different amino acid is reduced (acts as an electron acceptor); oxidation of the electron-donating amino acid yields energy in the form of ATP.","definition_xrefs":["PMID:13140081","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0006091"],"is_obsolete":false,"name":"anaerobic catabolism of pairs of amino acids","synonyms":[{"name":"Stickland reaction","type":"narrow"},{"name":"cofermentation of pairs of amino acids","type":"exact"}],"termid":"GO:0019668"}


id: GO:1900323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of maltotetraose transport","termid":"GO:1900321"},{"relation_name":"positively_regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of maltotetraose transport","synonyms":[{"name":"activation of maltotetraose transport","type":"narrow"},{"name":"up regulation of maltotetraose transport","type":"exact"},{"name":"up-regulation of maltotetraose transport","type":"exact"},{"name":"upregulation of maltotetraose transport","type":"exact"}],"termid":"GO:1900323"}


id: MONDO:0013412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"},{"relation_name":"is_a","term_name":"autosomal dominant titinopathy","termid":"MONDO:0100494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336","MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 9","secondary_identifiers":["DOID:0110315","MEDGEN:348780","MESH:C566044","OMIM:613765","UMLS:C1861065"],"synonyms":[{"name":"CMH9","type":"exact"},{"name":"TTN hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 9","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 9","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TTN","type":"exact"},{"name":"hypertrophic cardiomyopathy type 9","type":"exact"}],"termid":"MONDO:0013412","xrefs":{"Monarch":{"xref_id":"0013412"}}}


id: PBO:0074160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC35F3 antisense RNA 1","termid":"PBO:0074160"}


id: FYPO:0003393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which electron transport involved in cellular respiration is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal respiratory electron transport","synonyms":[{"name":"abnormal respiratory electron transport chain","type":"exact"},{"name":"abnormal respiratory electron transport during mitotic cell cycle","type":"related"},{"name":"abnormal respiratory electron transport process during vegetative growth","type":"exact"}],"termid":"FYPO:0003393"}


id: PBO:0063134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate androgen-regulated transcript 1","termid":"PBO:0063134"}


id: GO:1902896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a terminal web.","definition_xrefs":["GO_REF:0000079","GOC:kmv","GOC:TermGenie","PMID:21949650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"terminal web assembly","synonyms":[{"name":"terminal web formation","type":"exact"}],"termid":"GO:1902896"}


id: SO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Residues which interact with a ligand.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand_binding_site","termid":"SO:0001657"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_ligand_contact","secondary_identifiers":["BS:00157"],"synonyms":[{"name":"polypeptide ligand contact","type":"exact"},{"name":"protein-ligand interaction","type":"related"}],"termid":"SO:0001105"}


id: PBO:0090901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Ale1","termid":"PBO:0090901"}


id: MONDO:0013070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 7","secondary_identifiers":["UMLS:C2751811","GARD:18400","MESH:C567832","DOID:0070173","MEDGEN:414478","OMIM:612997"],"synonyms":[{"name":"Male infertility, nonsyndromic, autosomal recessive","type":"related"},{"name":"SPGF7","type":"related"},{"name":"spermatogenic failure 7","type":"exact"},{"name":"spermatogenic failure type 7","type":"exact"}],"termid":"MONDO:0013070","xrefs":{"Monarch":{"xref_id":"0013070"}}}


id: RO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p directly activates q if and only if p is immediately upstream of q and p is the realization of a function to increase the rate or activity of q","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_positively_regulates","termid":"RO:0002629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_activates","termid":"RO:0002406"}


id: MONDO:0014640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amyotrophic lateral sclerosis that has material basis in mutation in the SQSTM1 gene on chromosome 5q35.","definition_xrefs":["PMID:22084127","DOID:0110068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"behavioral variant of frontotemporal dementia","termid":"MONDO:0017160"},{"relation_name":"is_a","term_name":"frontotemporal dementia with motor neuron disease","termid":"MONDO:0017161"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"},{"relation_name":"is_a","term_name":"SQSTM1-related multisystem proteinopathy","termid":"MONDO:0800464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 3","secondary_identifiers":["UMLS:C4225326","MEDGEN:897127","OMIM:616437","GARD:16113"],"synonyms":[{"name":"FTDALS3","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 3","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis type 3","type":"exact"}],"termid":"MONDO:0014640","xrefs":{"Monarch":{"xref_id":"0014640"}}}


id: MONDO:0007039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor-prone disorder characterized by the development of multiple schwannomas and meningiomas.","definition_xrefs":["Orphanet:637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis","termid":"MONDO:0021061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"NF2-related schwannomatosis","secondary_identifiers":["MedDRA:10000523","SCTID:92503002","UMLS:C0027832","icd11.foundation:14808714","ICD9:237.72","MESH:D009464","GARD:7193","MedDRA:10029271","DOID:0111252","MEDGEN:18014","NANDO:1200227","NCIT:C3274","OMIM:101000","ICD10CM:Q85.02"],"synonyms":[{"name":"NF2","type":"exact"},{"name":"NF2-related schwannomatosis","type":"exact"},{"name":"SWNV","type":"exact"},{"name":"acoustic Schwannomas, bilateral","type":"related"},{"name":"acoustic neurinoma bilateral","type":"related"},{"name":"acoustic neurinoma, bilateral","type":"related"},{"name":"acoustic neurofibromatosis","type":"broad"},{"name":"acoustic schwannomas bilateral","type":"related"},{"name":"bilateral acoustic neurofibromatosis","type":"exact"},{"name":"central neurofibromatosis","type":"exact"},{"name":"full NF2","type":"exact"},{"name":"full neurofibromatosis type 2","type":"exact"},{"name":"neurofibromatosis 2","type":"exact"},{"name":"neurofibromatosis central type","type":"related"},{"name":"neurofibromatosis type 2","type":"exact"},{"name":"neurofibromatosis type II","type":"related"},{"name":"neurofibromatosis, central type","type":"related"},{"name":"neurofibromatosis, type 2","type":"related"},{"name":"neurofibromatosis, type II","type":"related"},{"name":"nonmosaic NF2-related schwannomatosis","type":"exact"},{"name":"nonmosaic neurofibromatosis type 2","type":"exact"},{"name":"vestibular schwannomatosis","type":"exact"}],"termid":"MONDO:0007039","xrefs":{"Monarch":{"xref_id":"0007039"}}}


id: PBO:0083113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta; involved in translesion synthesis during post-replication repair; catalyzes the synthesis of DNA opposite cyclobutane pyrimidine dimers and other lesions; involved in formation of post-replicative damage-induced genome-wide cohesion; may also have a role in protection against mitochondrial mutagenesis; may be involved in meiosis; mutations in human pol eta are responsible for XPV","termid":"PBO:0083113"}


id: PBO:0083125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichyl pyrophosphate (Dol-P-P) phosphatase; cleaves the anhydride linkage in Dol-P-P; involved in  synthesis of Dol-P-P-linked oligosaccharide intermediate required for protein N-glycosylation; has a luminally oriented active site in the ER; mutation affects vesicular transport, membrane and cell wall biogenesis and lipid homeostasis","termid":"PBO:0083125"}


id: PR:O14109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- maf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressor of RNA polymerase III transcription maf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.12c","synonyms":[{"name":"Spom972h-maf1","type":"exact"}],"termid":"PR:O14109"}


id: PBO:0051233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-31-1 (pseudogene)","termid":"PBO:0051233"}


id: MONDO:0013594
data:
  {"annotated_genes":["SJAG_02377"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85596],"is_not":false,"summary":null,"term":"MONDO:0013594"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 36 (SCA36) is a subtype of autosomal dominant cerebellar ataxia type 1 (ADCA type 1) characterized by gait and limb ataxia, lower limb spasticity, dysarthria, muscle fasiculations, tongue atrophy and hyperreflexia.","definition_xrefs":["Orphanet:276198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 36","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3472711","GARD:12367","MEDGEN:483339","icd11.foundation:1544814018","DOID:0050983","NCIT:C148316","SCTID:711158005","NANDO:1200048","OMIM:614153"],"synonyms":[{"name":"Asidan","type":"exact"},{"name":"SCA36","type":"exact"},{"name":"spinocerebellar ataxia 36","type":"related"},{"name":"spinocerebellar ataxia type 36","type":"exact"}],"termid":"MONDO:0013594","terms_by_termid":{"MONDO:0013594":null},"xrefs":{"Monarch":{"xref_id":"0013594"}}}


id: GO:0061279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to mesonephric distal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in mesonephric nephron tubule morphogenesis","termid":"GO:0061278"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in distal tubule morphogenesis","termid":"GO:0072157"},{"relation_name":"part_of","term_name":"mesonephric distal tubule morphogenesis","termid":"GO:0061273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in mesonephric distal tubule morphogenesis","termid":"GO:0061279"}


id: MONDO:0024519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal agenesis","termid":"MONDO:0018470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypodysplasia/aplasia 1","secondary_identifiers":["MEDGEN:301437","OMIM:191830","UMLS:C1619700"],"synonyms":[{"name":"RHDA1","type":"exact"},{"name":"Selig Benacerraf Greene syndrome","type":"related"},{"name":"hereditary renal aplasia","type":"related"},{"name":"renal adysplasia","type":"related"},{"name":"renal agenesis","type":"related"},{"name":"renal aplasia","type":"related"},{"name":"renal dysplasia, megalocystis, and sirenomelia","type":"related"},{"name":"renal hypodysplasia/aplasia 1","type":"exact"}],"termid":"MONDO:0024519","xrefs":{"Monarch":{"xref_id":"0024519"}}}


id: SO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that is regulated as it is translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_regulated","synonyms":[{"name":"translationally regulated","type":"exact"}],"termid":"SO:0000131"}


id: PBO:0079065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 1-1","termid":"PBO:0079065"}


id: PBO:0038283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_comment","termid":"PBO:0038283"}


id: GO:0047740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (7R)-7-(5-carboxylato-5-oxopentanamido)deacetylcephalosporanate + D-glutamate = 2-oxoglutarate + cephalosporin C.","definition_xrefs":["EC:2.6.1.74","RHEA:14553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cephalosporin-C transaminase activity","secondary_identifiers":["MetaCyc:CEPHALOSPORIN-C-TRANSAMINASE-RXN","KEGG_REACTION:R03063"],"synonyms":[{"name":"L-alanine:cephalosporin-C aminotransferase activity","type":"related"},{"name":"cephalosporin C aminotransferase activity","type":"related"},{"name":"cephalosporin-C:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0047740"}


id: GO:2000729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in ureter development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in ureter development","termid":"GO:0072199"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"positive regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"positive regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:2000729"}


id: GO:0071908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the intestine loops with respect to the left and right halves of the organism.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of digestive tract left/right asymmetry","termid":"GO:0071907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of intestine left/right asymmetry","termid":"GO:0071908"}


id: PATO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced","termid":"PATO:0002181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dislocated","secondary_identifiers":["PATO:0002159","PATO:0001479","PATO:0002158"],"synonyms":[{"name":"dislocation","type":"exact"},{"name":"luxated","type":"exact"},{"name":"luxation","type":"exact"},{"name":"relational dislocated quality","type":"exact"}],"termid":"PATO:0001852"}


id: GO:0097196
data:
  {"annotated_genes":["SJAG_02181","SJAG_03051"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90559,102118],"is_not":false,"summary":null,"term":"GO:0097196"}]},"cv_name":"cellular_component","definition":"A protein complex involved in error-free DNA post-replication repair (PRR). In Saccharomyces cerevisiae the complex contains Csm2p, Psy3p, Shu1p, and Shu2p.","definition_xrefs":["PMID:15654096","GOC:jh","PMID:19496932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02181":null,"SJAG_03051":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Shu complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097196","terms_by_termid":{"GO:0097196":null}}


id: GO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cell along or through a wound gap that contributes to the reestablishment of a continuous surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"epiboly involved in wound healing","termid":"GO:0090505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of cells","synonyms":[{"name":"cell migration involved in wound healing epiboly","type":"exact"}],"termid":"GO:0044319"}


id: PBO:0044806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 105A","termid":"PBO:0044806"}


id: PBO:0090664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF, N-terminal (4F5-like)","termid":"PBO:0090664"}


id: PBO:0085215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoylated vacuolar membrane-localized casein kinase I isoform; negatively regulates vacuole fusion during hypertonic stress via phosphorylation of Vps41p; shares essential functions with Hrr25p; regulates vesicle fusion in AP-3 pathway","termid":"PBO:0085215"}


id: GO:0086021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an SA node cardiomyocyte and an atrial cardiomyocyte by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"SA node cell to atrial cardiac muscle cell communication","termid":"GO:0086070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SA node cell to atrial cardiac muscle cell communication by electrical coupling","synonyms":[{"name":"SA node cardiac muscle cell to atrial cardiac muscle cell communication by electrical coupling","type":"exact"},{"name":"SA node cardiomyocyte to atrial cardiomyocyte communication by electrical coupling","type":"exact"},{"name":"SAN cardiomyocyte to atrial cardiomyocyte communication by electrical coupling","type":"exact"},{"name":"sinoatrial node cardiomyocyte to atrial cardiomyocyte communication by electrical coupling","type":"exact"},{"name":"sinus node cardiomyocyte to atrial cardiomyocyte communication by electrical coupling","type":"narrow"}],"termid":"GO:0086021"}


id: GO:0102143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxynorspermidine + H2O + NADP+ = H+ + L-aspartate 4-semialdehyde + NADPH + propane-1,3-diamine. Also converts carboxyspermidine to putrescine.","definition_xrefs":["EC:1.5.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"carboxynorspermidine dehydrogenase activity","synonyms":[{"name":"carboxynorspermidine dehydrogenase I activity","type":"narrow"},{"name":"carboxynorspermidine dehydrogenase II activity","type":"narrow"}],"termid":"GO:0102143"}


id: PBO:0027710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_binucleate_cell_during_stationary_phase","termid":"PBO:0027710"}


id: GO:0005861
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of accessory proteins (typically troponin T, troponin I and troponin C) found associated with actin in muscle thin filaments; involved in calcium regulation of muscle contraction.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"striated muscle thin filament","termid":"GO:0005865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"troponin complex","termid":"GO:0005861"}


id: PATO:0000488
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A response quality inhering in a bearer by virtue of the bearer's lack of reaction to a stimulus or an agent.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to","termid":"PATO:0000077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unresponsive to","synonyms":[{"name":"unresponsive","type":"exact"}],"termid":"PATO:0000488"}


id: PBO:0081428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 282","termid":"PBO:0081428"}


id: GO:1990924
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The lipid bilayer surrounding the amphisome and separating its contents from the cell cytoplasm.","definition_xrefs":["PMID:17984323","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete amphisome membrane (obsolete GO:1990924)","synonyms":[{"name":"amphisomal membrane","type":"exact"}],"termid":"GO:1990924"}


id: PR:O60101
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoglycerate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.04c","secondary_identifiers":["UniProtKB:O60101"],"synonyms":[{"name":"SPBC14F5.04c","type":"related"},{"name":"Spom972h-pgk","type":"exact"}],"termid":"PR:O60101"}


id: MONDO:0009453
data:
  {"annotated_genes":["SJAG_00610","SJAG_01787","SJAG_03536","SJAG_04380","SJAG_03453","SJAG_02184","SJAG_01697","SJAG_02803","SJAG_00222","SJAG_02208","SJAG_00400","SJAG_02479","SJAG_02039","SJAG_04743","SJAG_00771","SJAG_03805","SJAG_02572","SJAG_02330","SJAG_04118","SJAG_01884","SJAG_02528","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030519"},{"annotations":[85100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[84930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[84933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[85019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[86405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[85575,85576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"},{"annotations":[86057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[85431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[86378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[86134,86133,86135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010066"},{"annotations":[85820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[85736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[84826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011971"},{"annotations":[85056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010504"},{"annotations":[85854,85853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"},{"annotations":[86185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[86036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00400":null,"SJAG_00610":null,"SJAG_00771":null,"SJAG_01697":null,"SJAG_01787":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02184":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_02479":null,"SJAG_02528":null,"SJAG_02572":null,"SJAG_02803":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_03805":null,"SJAG_04118":null,"SJAG_04380":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immune deficiency disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:242850","MESH:C565469","MEDGEN:340961","UMLS:C1855771"],"synonyms":[{"name":"immune deficiency disease","type":"exact"}],"termid":"MONDO:0009453","terms_by_termid":{"MONDO:0010066":null,"MONDO:0010504":null,"MONDO:0010600":null,"MONDO:0011336":null,"MONDO:0011971":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0013135":null,"MONDO:0013767":null,"MONDO:0013818":null,"MONDO:0014007":null,"MONDO:0024541":null,"MONDO:0030519":null,"MONDO:0958013":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0009453"}}}


id: PBO:0061245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA activated by DNA damage","termid":"PBO:0061245"}


id: PBO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC family","termid":"PBO:0000849"}


id: PBO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP4A22 antisense RNA 1","termid":"PBO:0044431"}


id: PBO:0078948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 6-1","termid":"PBO:0078948"}


id: PATO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's increased rate of change of the position.","definition_xrefs":["PATOC:NV"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"velocity","termid":"PATO:0002242"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased velocity","termid":"PATO:0002471"}


id: FYPO:0004333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah","PMID:22139357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during cellular response to oxidative stress","termid":"FYPO:0003692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to hydrogen peroxide","synonyms":[{"name":"increased protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"increased protein phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0004333"}


id: GO:0048733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland development","termid":"GO:0048733"}


id: PBO:0047252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 239 member C","termid":"PBO:0047252"}


id: GO:0009590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a gravitational stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:hb","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to gravity","termid":"GO:0009629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of gravity","synonyms":[{"name":"perception of gravity","type":"related"}],"termid":"GO:0009590"}


id: FYPO:0008191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at a natural  replication barrier is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal replication fork arrest","termid":"FYPO:0008191"}


id: PBO:0065517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 2","termid":"PBO:0065517"}


id: PATO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having three rays or radiating branches.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triradiate","termid":"PATO:0002391"}


id: MONDO:0021534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the rectum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C5547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neuroendocrine tumor G1","termid":"MONDO:0006162"},{"relation_name":"is_a","term_name":"rectal neuroendocrine tumor","termid":"MONDO:0015068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:233389","SCTID:713306000","UMLS:C1335678"],"synonyms":[{"name":"carcinoid of rectum","type":"exact"},{"name":"carcinoid of the rectum","type":"exact"},{"name":"carcinoid tumor of rectum","type":"exact"},{"name":"carcinoid tumor of the rectum","type":"exact"},{"name":"carcinoid tumour of rectum","type":"exact"},{"name":"carcinoid tumour of the rectum","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of rectum","type":"exact"},{"name":"rectal NET G1","type":"exact"},{"name":"rectal carcinoid","type":"exact"},{"name":"rectal carcinoid tumor","type":"exact"},{"name":"rectal carcinoid tumour","type":"exact"},{"name":"rectal neuroendocrine tumor G1","type":"exact"},{"name":"rectum NET G1","type":"exact"},{"name":"rectum carcinoid tumor","type":"exact"},{"name":"rectum carcinoid tumor (disease)","type":"exact"},{"name":"rectum carcinoid tumour","type":"exact"},{"name":"rectum carcinoid tumour (disease)","type":"exact"},{"name":"rectum neuroendocrine neoplasm G1","type":"exact"},{"name":"rectum neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0021534","xrefs":{"Monarch":{"xref_id":"0021534"}}}


id: PBO:0047248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 238 member B","termid":"PBO:0047248"}


id: PBO:0003092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase, decarboxylating","termid":"PBO:0003092"}


id: FYPO:0002067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population grows more slowly than normal when the population has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"slow vegetative cell population growth","termid":"FYPO:0001234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"slow cell population growth during recovery from stationary phase","termid":"FYPO:0002067"}


id: PBO:0054164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1533","termid":"PBO:0054164"}


id: MONDO:0000192
data:
  {"annotated_genes":["SJAG_03149","SJAG_03150"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86483,86482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014526"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"polyglucosan body myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:615895"],"termid":"MONDO:0000192","terms_by_termid":{"MONDO:0014526":null},"xrefs":{"Monarch":{"xref_id":"0000192"}}}


id: MONDO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma characterized by a plexiform or multinodular growth pattern. It usually arises from the skin or subcutaneous tissues in the extremities, trunk, and head and neck.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexiform schwannoma","secondary_identifiers":["DOID:3206","ICD9:215.9","UMLS:C1370659","MEDGEN:277972","NCIT:C6969","SCTID:404025004"],"synonyms":[{"name":"plexiform neurilemmoma","type":"exact"},{"name":"plexiform neurinoma","type":"exact"},{"name":"plexiform schwannoma","type":"exact"},{"name":"plexiform schwannoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002559","xrefs":{"Monarch":{"xref_id":"0002559"}}}


id: FYPO:0006349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin at promoter","synonyms":[{"name":"abolished protein localisation to chromatin at promoter during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at promoter element","type":"exact"},{"name":"protein localization to chromatin at promoter abolished","type":"exact"}],"termid":"FYPO:0006349"}


id: PBO:0027729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_mitochondrion","termid":"PBO:0027729"}


id: PBO:0083085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA 5' AMP hydrolase involved in DNA repair; member of the histidine triad (HIT) superfamily of nucleotide-binding proteins; homolog of Aprataxin, a Hint related protein that is mutated in individuals with ataxia with oculomotor apraxia; relative distribution to nuclear foci decreases upon DNA replication stress","termid":"PBO:0083085"}


id: GO:0071605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of monocyte chemotactic protein-1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"monocyte chemotactic protein-1 production","synonyms":[{"name":"CCL2 production","type":"exact"},{"name":"MCP-1 production","type":"exact"}],"termid":"GO:0071605"}


id: PBO:0051244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-65-1 (pseudogene)","termid":"PBO:0051244"}


id: PBO:0080611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45 pseudogene 1","termid":"PBO:0080611"}


id: FYPO:0003574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003574"}


id: FYPO:0001522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on caffeine","synonyms":[{"name":"normal cell population growth in presence of caffeine","type":"exact"},{"name":"normal cell population growth on caffeine","type":"exact"},{"name":"normal cellular response to caffeine","type":"related"},{"name":"normal vegetative cell population growth on caffeine","type":"exact"}],"termid":"FYPO:0001522"}


id: GO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or around a point.","definition_xrefs":["GOC:go_curators","GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis specification","synonyms":[{"name":"axis determination","type":"related"}],"termid":"GO:0009798"}


id: PBO:0005863
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this may be a none coding RNA","termid":"PBO:0005863"}


id: PBO:0072705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 1","termid":"PBO:0072705"}


id: GO:1990456
data:
  {"annotated_genes":["SJAG_01305","SJAG_03416","SJAG_04370","SJAG_03710","SJAG_01929"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69523,69608,74378,79878,116422],"is_not":false,"summary":null,"term":"GO:1990456"}]},"cv_name":"biological_process","definition":"The attachment of a mitochondrion and an endoplasmic reticulum via molecular tethers that physically bridge their respective membranes and attach them to each other. The tethering may facilitate exchange of metabolites between the organelles.","definition_xrefs":["PMID:19556461","PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140056","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrion-endoplasmic reticulum membrane tethering","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrion-ER attachment","type":"exact"},{"name":"mitochondrion-ER membrane tethering","type":"exact"},{"name":"mitochondrion-ER tethering","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum attachment","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum tethering","type":"exact"}],"termid":"GO:1990456","terms_by_termid":{"GO:1990456":null}}


id: PBO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase Agl1","termid":"PBO:0001816"}


id: MONDO:0007426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, unilateral","secondary_identifiers":["MEDGEN:435850","MESH:C567079","OMIM:125000","UMLS:C2607947"],"synonyms":[{"name":"deafness, unilateral","type":"exact"}],"termid":"MONDO:0007426","xrefs":{"Monarch":{"xref_id":"0007426"}}}


id: PBO:0110431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WTAP pseudogene 1","termid":"PBO:0110431"}


id: PBO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta Nda3","termid":"PBO:0004744"}


id: MONDO:0019926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X small rings is a rare chromosome X structural anomaly, with highly variable phenotype, principally characterized by developmental delay, intellectual disability, short stature, craniofacial dysmorphism (incl. microcephaly, facial asymmetry, hypertelorism, long palpebral fissures, epicanthus, low-set or malrotated ears, broad nose with a flat nasal bridge, anteverted nares, long philtrum, thin upper lip, high arched palate, micrognathia) and skeletal anomalies (e.g. cubitus valgus, talipes equinovarus). Patients may also present heart malformations (e.g. ventricular septal defects, mitral valve stenosis), sacral dimple, soft tissue syndactyly, pigmented nevi, and seizures.","definition_xrefs":["Orphanet:96201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"X small rings","secondary_identifiers":["SCTID:766760004","GARD:19345","UMLS:C4707824","MEDGEN:1641475"],"termid":"MONDO:0019926","xrefs":{"Monarch":{"xref_id":"0019926"}}}


id: GO:1904792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shelterin complex assembly.","definition_xrefs":["GOC:nc","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","PMID:24270157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of shelterin complex assembly","termid":"GO:1904790"},{"relation_name":"positively_regulates","term_name":"shelterin complex assembly","termid":"GO:0071573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of shelterin complex assembly","synonyms":[{"name":"activation of Pot1 complex assembly","type":"narrow"},{"name":"activation of Pot1-Tpz1 complex assembly","type":"narrow"},{"name":"activation of shelterin complex formation","type":"narrow"},{"name":"activation of telosome assembly","type":"narrow"},{"name":"positive regulation of Pot1 complex assembly","type":"exact"},{"name":"positive regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"positive regulation of shelterin complex formation","type":"exact"},{"name":"positive regulation of telosome assembly","type":"exact"},{"name":"up regulation of Pot1 complex assembly","type":"exact"},{"name":"up regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"up regulation of shelterin complex formation","type":"exact"},{"name":"up regulation of telosome assembly","type":"exact"},{"name":"up-regulation of Pot1 complex assembly","type":"exact"},{"name":"up-regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"up-regulation of shelterin complex formation","type":"exact"},{"name":"up-regulation of telosome assembly","type":"exact"},{"name":"upregulation of Pot1 complex assembly","type":"exact"},{"name":"upregulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"upregulation of shelterin complex formation","type":"exact"},{"name":"upregulation of telosome assembly","type":"exact"}],"termid":"GO:1904792"}


id: GO:1904939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GO_REF:0000059","PMID:23575307","GOC:BHF","GOC:BHF_miRNA","GOC:bc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904939)","synonyms":[{"name":"regulation of TdT","type":"related"},{"name":"regulation of addase activity","type":"exact"},{"name":"regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of terminal addition enzyme activity","type":"related"},{"name":"regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904939"}


id: PBO:0012023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator subunit Elp1 (predicted)","termid":"PBO:0012023"}


id: MONDO:0005909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with viruses of the genus pestivirus, family flaviviridae.","definition_xrefs":["MESH:D018182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pestivirus infectious disease","secondary_identifiers":["EFO:0007432","UMLS:C0206611","MEDGEN:60191"],"synonyms":[{"name":"Pestivirus caused disease or disorder","type":"exact"},{"name":"Pestivirus disease or disorder","type":"exact"},{"name":"Pestivirus infection","type":"related"},{"name":"Pestivirus infectious disease","type":"exact"},{"name":"infection, Pestivirus","type":"related"},{"name":"infections, Pestivirus","type":"related"}],"termid":"MONDO:0005909","xrefs":{"Monarch":{"xref_id":"0005909"}}}


id: FYPO:0005486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased iron-sulfur cluster binding","synonyms":[{"name":"increased iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0005486"}


id: MONDO:0001121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the frontal sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal sinusitis","secondary_identifiers":["NCIT:C34626","SCTID:78737005","MEDGEN:8919","UMLS:C0016735","DOID:10791","MESH:D015522"],"termid":"MONDO:0001121","xrefs":{"Monarch":{"xref_id":"0001121"}}}


id: PBO:0068077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 383","termid":"PBO:0068077"}


id: PBO:0017985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug20","termid":"PBO:0017985"}


id: GO:0150145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD80 production","termid":"GO:0150143"},{"relation_name":"positively_regulates","term_name":"CD80 biosynthetic process","termid":"GO:0035780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD80 production","synonyms":[{"name":"positive regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150145"}


id: PBO:0070399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ROS proto-oncogene 1, receptor tyrosine kinase","termid":"PBO:0070399"}


id: PBO:0005197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp21 (predicted)","termid":"PBO:0005197"}


id: FYPO:0004288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of GT dinucleotide microsatellite repeats present in a sequence varies more than normal.","definition_xrefs":["PMID:18062930","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased GT repeat stability","synonyms":[{"name":"decreased GT dinucleotide repeat stability","type":"exact"},{"name":"decreased GT microsatellite repeat stability","type":"exact"},{"name":"reduced GT repeat stability","type":"exact"}],"termid":"FYPO:0004288"}


id: PBO:0045164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 4","termid":"PBO:0045164"}


id: GO:1902225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acrosome reaction.","definition_xrefs":["GOC:TermGenie","PMID:23430248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acrosome reaction","termid":"GO:0060046"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acrosome reaction","synonyms":[{"name":"down regulation of acrosome reaction","type":"exact"},{"name":"down-regulation of acrosome reaction","type":"exact"},{"name":"downregulation of acrosome reaction","type":"exact"},{"name":"inhibition of acrosome reaction","type":"narrow"}],"termid":"GO:1902225"}


id: PBO:0054086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1438","termid":"PBO:0054086"}


id: GO:0061591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a population of galactosylceramide molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet as a result of a calcium stimulus.","definition_xrefs":["GOC:krc","PMID:23532839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium activated phospholipid scrambling","termid":"GO:0061588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"calcium activated galactosylceramide scrambling","termid":"GO:0061591"}


id: PBO:0075319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 1","termid":"PBO:0075319"}


id: MONDO:0009187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Celiac disease, epilepsy and cerebral calcification syndrome (CEC) is a rare disorder characterized by the combination of auto-immune intestinal disease, epileptic seizures and cerebral calcifications.","definition_xrefs":["Orphanet:1459"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"antibody mediated epilepsy","termid":"MONDO:0100029"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease-epilepsy-cerebral calcification syndrome","secondary_identifiers":["OMIM:226810","MEDGEN:341654","GARD:2166","MESH:C535496","UMLS:C1856930"],"synonyms":[{"name":"CEC","type":"exact"},{"name":"bilateral occipital calcifications with epilepsy","type":"related"},{"name":"celiac disease epilepsy occipital calcifications","type":"related"},{"name":"celiac disease, epilepsy, and cerebral calcification syndrome","type":"exact"},{"name":"coeliac disease epilepsy occipital calcifications","type":"related"},{"name":"coeliac disease, epilepsy, and cerebral calcification syndrome","type":"exact"},{"name":"epilepsy occipital calcifications","type":"related"},{"name":"epilepsy with bilateral occipital calcifications","type":"related"},{"name":"familial unilateral and bilateral occipital calcifications and epilepsy","type":"related"}],"termid":"MONDO:0009187","xrefs":{"Monarch":{"xref_id":"0009187"}}}


id: PBO:0004273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD dependent epimerase/dehydratase family protein","termid":"PBO:0004273"}


id: PR:O59826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A voltage-gated potassium channel subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage-gated potassium channel subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.06","secondary_identifiers":["UniProtKB:O59826"],"synonyms":[{"name":"K(+) channel subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KCNAB1","type":"exact"}],"termid":"PR:O59826"}


id: GO:0018815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon + H2O = 2-oxobut-3-enanoate + 2,5,6-trihydroxy-3-methylpyridine.","definition_xrefs":["UM-BBD_reactionID:r0051","MetaCyc:RXN-645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon hydratase-aldolase activity","termid":"GO:0018815"}


id: PBO:0089923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2011 family conserved fungal protein","termid":"PBO:0089923"}


id: MONDO:0011796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, partial, with pericentral spikes","secondary_identifiers":["MESH:C564605","UMLS:C1846609","OMIM:607221","MEDGEN:337614"],"synonyms":[{"name":"Epps","type":"related"},{"name":"PEPS","type":"exact"},{"name":"epilepsy, partial, with pericentral spikes","type":"exact"}],"termid":"MONDO:0011796","xrefs":{"Monarch":{"xref_id":"0011796"}}}


id: PBO:0083898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of thenuclear pore complex (NPC) permeability barrier; possible karyopherin release factor that accelerates release of karyopherin-cargo complexes after transport across NPC; both NUP1 and NUP60 are homologous to human NUP153","termid":"PBO:0083898"}


id: PBO:0029946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029946"}


id: PBO:0088710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2457 family conserved fungal protein","termid":"PBO:0088710"}


id: PBO:0040714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6B transcription repressor","termid":"PBO:0040714"}


id: GO:0005770
data:
  {"annotated_genes":["SJAG_03137","SJAG_01309","SJAG_03976","SJAG_04552","SJAG_01039","SJAG_04047","SJAG_02432","SJAG_03131","SJAG_00416","SJAG_07012","SJAG_01367","SJAG_01488","SJAG_03783","SJAG_01324","SJAG_04024","SJAG_00900","SJAG_05210","SJAG_03072","SJAG_04359","SJAG_04513","SJAG_05207","SJAG_04643","SJAG_04349","SJAG_01981","SJAG_00287","SJAG_03892","SJAG_04616","SJAG_03347","SJAG_01379","SJAG_00181","SJAG_01088","SJAG_00204","SJAG_02049","SJAG_03848","SJAG_00380","SJAG_02100","SJAG_04023","SJAG_00173","SJAG_01242","SJAG_02516","SJAG_04489","SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70439,70731,70884,71244,71419,74425,74441,76921,76966,79649,79853,98649,99498,103848,104876,108484,109438,111053,117361],"is_not":false,"summary":null,"term":"GO:0005770"},{"annotations":[97408],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031906"},{"annotations":[99296,100865,97435,75719,78184,91758,87866],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031902"},{"annotations":[90756],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035658"},{"annotations":[70686,76096,105555,113111,75703,79054,69672,114251,75444,70446,118928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005771"},{"annotations":[118930,60185,62151],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032585"}]},"cv_name":"cellular_component","definition":"A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.","definition_xrefs":["PMID:2557062","NIF_Subcellular:nlx_subcell_20090702","PMID:11964142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00287":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00900":null,"SJAG_01039":null,"SJAG_01088":null,"SJAG_01242":null,"SJAG_01309":null,"SJAG_01324":null,"SJAG_01367":null,"SJAG_01379":null,"SJAG_01488":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02432":null,"SJAG_02516":null,"SJAG_03072":null,"SJAG_03131":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03892":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04349":null,"SJAG_04359":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04552":null,"SJAG_04616":null,"SJAG_04643":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"late endosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"synonyms":[{"name":"PVC","type":"broad"},{"name":"prevacuolar compartment","type":"exact"}],"termid":"GO:0005770","terms_by_termid":{"GO:0005770":null,"GO:0005771":null,"GO:0031902":null,"GO:0031906":null,"GO:0032585":null,"GO:0035658":null}}


id: GO:0016665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, an iron-sulfur protein, oxygen, NAD or NADP.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on other nitrogenous compounds as donors, other acceptors (obsolete GO:0016665)","synonyms":[{"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, other acceptors","type":"exact"}],"termid":"GO:0016665"}


id: GO:0016282
data:
  {"annotated_genes":["SJAG_03472","SJAG_04891","SJAG_04900","SJAG_02995","SJAG_03147","SJAG_02628","SJAG_02376","SJAG_04744","SJAG_04981","SJAG_01117","SJAG_02164","SJAG_00662","SJAG_02263"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59000,59325,61959,63001,63517,63668,68154,69260,71926,74160,95844,96619,98711],"is_not":false,"summary":null,"term":"GO:0016282"}]},"cv_name":"cellular_component","definition":"A protein complex composed of the 40S ribosomal subunit plus eIF1, eIF1A, eIF3, eIF5, and eIF2-GTP-bound methionyl-initiator methionine tRNA.","definition_xrefs":["PMID:16510876","PMID:25742741","PMID:29735639","PMID:15145049","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation preinitiation complex","termid":"GO:0070993"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_01117":null,"SJAG_02164":null,"SJAG_02263":null,"SJAG_02376":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"eukaryotic 43S preinitiation complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"eukaryotic 43S pre-initiation complex","type":"exact"}],"termid":"GO:0016282","terms_by_termid":{"GO:0016282":null}}


id: MONDO:0020425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal number of coronary ostia","secondary_identifiers":["GARD:19644","MEDGEN:1676211","UMLS:C5191081","Orphanet:99089"],"termid":"MONDO:0020425","xrefs":{"Monarch":{"xref_id":"0020425"}}}


id: GO:0005656
data:
  {"annotated_genes":["SJAG_02394","SJAG_00857","SJAG_04062","SJAG_00884","SJAG_01762","SJAG_03451","SJAG_01354","SJAG_02607","SJAG_04210","SJAG_05301","SJAG_01267","SJAG_02800","SJAG_02348","SJAG_03927","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[56971,58106,60780,61019,62391,65732,71361,73481,103106,107632,107846,110354,111181,111438,112978],"is_not":false,"summary":null,"term":"GO:0005656"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex assembled at eukaryotic DNA replication origins during late mitosis and G1, allowing the origin to become competent, or 'licensed', for replication. The complex normally includes the origin recognition complex (ORC), Cdc6, Cdt1 and the MiniChromosome Maintenance (Mcm2-7) proteins.","definition_xrefs":["PMID:15222894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex","termid":"GO:0036387"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02074":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04062":null,"SJAG_04210":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear pre-replicative complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"eukaryotic pre-replicative complex","type":"exact"},{"name":"pre-RC","type":"related"},{"name":"pre-replicative complex","type":"broad"}],"termid":"GO:0005656","terms_by_termid":{"GO:0005656":null}}


id: PBO:0053373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 298","termid":"PBO:0053373"}


id: FYPO:0000113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to staurosporine. Cells stop growing (and may die) at a concentration of staurosporine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to staurosporine","synonyms":[{"name":"hypersensitive to staurosporine","type":"exact"},{"name":"sensitive to staurosporine during mitotic cell cycle","type":"related"},{"name":"sensitive to staurosporine during vegetative growth","type":"exact"}],"termid":"FYPO:0000113"}


id: PBO:0063317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase 1","termid":"PBO:0063317"}


id: MONDO:0003537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of lymphoblasts committed to the T-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called T acute lymphoblastic leukemia. When it involves nodal or extranodal sites it is called T lymphoblastic lymphoma. (WHO, 2001)","definition_xrefs":["NCIT:C8694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"},{"relation_name":"is_a","term_name":"T-cell and NK-cell neoplasm","termid":"MONDO:0024615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"precursor T-lymphoblastic lymphoma/leukemia","secondary_identifiers":["MEDGEN:224897","ICDO:9837/3","UMLS:C1301359","DOID:5599"],"synonyms":[{"name":"T lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T lymphoblastic lymphoma/leukemia","type":"exact"},{"name":"precursor T-lymphoblastic lymphoma/leukemia","type":"exact"}],"termid":"MONDO:0003537","xrefs":{"Monarch":{"xref_id":"0003537"}}}


id: PBO:0042910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 7","termid":"PBO:0042910"}


id: PBO:0082305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0082305"}


id: PBO:0079090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-3","termid":"PBO:0079090"}


id: PBO:0041709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 4","termid":"PBO:0041709"}


id: GO:0072587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of ATP-hydrolyzing DNA topoisomerase. DNA topoisomerase (ATP-hydrolyzing) regulator activity catalyzes a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase activator activity","termid":"GO:0001671"},{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity","termid":"GO:0072586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0001671"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0001671","GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activator activity","termid":"GO:0072587"}


id: PBO:0063090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 8","termid":"PBO:0063090"}


id: MONDO:0005913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Influenza-like febrile viral disease caused by several members of the bunyaviridae family and transmitted mostly by the bloodsucking sandfly Phlebotomus papatasii.","definition_xrefs":["MESH:D010217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phlebotomus fever","secondary_identifiers":["EFO:0007437","SCTID:407476002","DOID:11360","MEDGEN:14597","ICD10CM:A93.1","ICD9:066.0","UMLS:C0030372"],"synonyms":[{"name":"Sandfly fever","type":"exact"},{"name":"Sandfly-borne Bunyavirus fever","type":"exact"},{"name":"Sandfly-borne arboviral fever","type":"exact"},{"name":"Sandfly-borne phleboviral disease","type":"exact"},{"name":"pappataci fever","type":"exact"}],"termid":"MONDO:0005913","xrefs":{"Monarch":{"xref_id":"0005913"}}}


id: PBO:0081552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 471","termid":"PBO:0081552"}


id: FYPO:0001333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype that affects the regulation of gene expression in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype","termid":"FYPO:0000288"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"gene expression regulation phenotype during vegetative growth","synonyms":[{"name":"fission yeast gene expression regulation phenotype during vegetative growth","type":"exact"},{"name":"gene expression regulation phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001333"}


id: PBO:0038698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 10","termid":"PBO:0038698"}


id: MONDO:0016928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 7 disorder","termid":"MONDO:0700014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 7","secondary_identifiers":["Orphanet:262633","UMLS:C4518496","GARD:20848","SCTID:726346004","MEDGEN:1383136"],"synonyms":[{"name":"partial duplication of chromosome type 7","type":"exact"},{"name":"partial trisomy of chromosome 7","type":"exact"}],"termid":"MONDO:0016928","xrefs":{"Monarch":{"xref_id":"0016928"}}}


id: MONDO:1010756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary severe hyperkeratosis in dogs due to a variation in the TGM1 gene.","definition_xrefs":["PMID:39118209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis TGM1-related, dog","secondary_identifiers":["OMIA:000546-9615"],"termid":"MONDO:1010756","xrefs":{"Monarch":{"xref_id":"1010756"}}}


id: GO:0060787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of the formation of the posterior neural plate, the posterior end of the flat, thickened layer of ectodermal cells known as the neural plate.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"positively_regulates","term_name":"posterior neural plate formation","termid":"GO:0090018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"positive regulation of posterior neural plate formation by FGF receptor signaling pathway","type":"related"},{"name":"positive regulation of posterior neural plate formation by fibroblast growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060787"}


id: PBO:0055990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and transmembrane domains 2","termid":"PBO:0055990"}


id: PBO:0080997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 33","termid":"PBO:0080997"}


id: PBO:0062927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y14","termid":"PBO:0062927"}


id: PBO:0051659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interphotoreceptor matrix proteoglycan 2","termid":"PBO:0051659"}


id: PBO:0052281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 7A","termid":"PBO:0052281"}


id: FYPO:0000365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"small nucleus","synonyms":[{"name":"size of nucleus: decreased","type":"related"},{"name":"small nuclei","type":"exact"},{"name":"small nucleus during mitotic cell cycle","type":"related"},{"name":"small nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0000365"}


id: PBO:0004545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP70 family","termid":"PBO:0004545"}


id: FYPO:0004819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of DNA replication origins in ribosomal DNA at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci at rDNA replication origins","synonyms":[{"name":"increased number of Rad22 foci at rDNA replication origins","type":"exact"},{"name":"increased number of Rad52 foci at rDNA replication origins during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci at rDNA replication origins during vegetative growth","type":"exact"},{"name":"increased number of Rad52 foci at ribosomal DNA replication origins","type":"exact"}],"termid":"FYPO:0004819"}


id: PBO:0027487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_G0","termid":"PBO:0027487"}


id: GO:0033507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates from other compounds including phenylalanine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-2821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glucosinolate biosynthetic process from phenylalanine","synonyms":[{"name":"glucosinolate anabolism from phenylalanine","type":"exact"},{"name":"glucosinolate biosynthesis from phenylalanine","type":"exact"},{"name":"glucosinolate formation from phenylalanine","type":"exact"},{"name":"glucosinolate synthesis from phenylalanine","type":"exact"}],"termid":"GO:0033507"}


id: PBO:0063899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class V","termid":"PBO:0063899"}


id: GO:0010754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cGMP-mediated signaling.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cGMP-mediated signaling","termid":"GO:0010752"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cGMP-mediated signaling","synonyms":[{"name":"negative regulation of cGMP-mediated signalling","type":"exact"}],"termid":"GO:0010754"}


id: SO:0001172
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a tRNA.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_region","synonyms":[{"name":"tRNA region","type":"exact"}],"termid":"SO:0001172"}


id: FYPO:0004952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the prospore membrane begins to form and enclose the nucleus, but the leading edge does not close completely, leaving a gap in the membrane.","definition_xrefs":["PomBase:mah","PMID:17951524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000121","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"incomplete prospore membrane closure","synonyms":[{"name":"incomplete enclosure of nucleus by forespore membrane","type":"related"},{"name":"incomplete engulfment of nucleus by forespore membrane","type":"related"},{"name":"incomplete forespore membrane closure","type":"exact"}],"termid":"FYPO:0004952"}


id: PBO:0050255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 33","termid":"PBO:0050255"}


id: PBO:0077196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 1","termid":"PBO:0077196"}


id: GO:0010909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of heparan sulfate proteoglycan biosynthesis. Heparan sulfate proteoglycan biosynthetic processes are the chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating alpha-(1->4)-linked hexuronic acid and glucosamine residues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heparan sulfate proteoglycan biosynthetic process","termid":"GO:0010908"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of proteoglycan biosynthetic process","termid":"GO:1902730"},{"relation_name":"positively_regulates","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of heparan sulfate proteoglycan biosynthetic process","termid":"GO:0010909"}


id: PBO:0049940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA3 antisense RNA 1","termid":"PBO:0049940"}


id: PBO:0076758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymine-DNA glycosylase pseudogene 1","termid":"PBO:0076758"}


id: MONDO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juberg-Hayward syndrome is a polymalformative syndrome that associates multiple skeletal anomalies with microcephaly, facial dysmorphism, urogenital anomalies and intellectual deficit.","definition_xrefs":["Orphanet:2319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Juberg-Hayward syndrome","secondary_identifiers":["GARD:3060","UMLS:C0796099","icd11.foundation:395922030","NORD:1531","SCTID:721874001","MESH:C537690","MEDGEN:162906","OMIM:216100"],"synonyms":[{"name":"JHS","type":"related"},{"name":"Juberg-Hayward syndrome","type":"exact"},{"name":"Orocraniodigital Syndrome","type":"exact"},{"name":"Orocraniodigital syndrome","type":"exact"},{"name":"cleft LIP/palate with abnormal thumbs and microcephaly","type":"related"},{"name":"cleft lip/palate-abnormal thumbs-microcephaly syndrome","type":"exact"}],"termid":"MONDO:0008992","xrefs":{"Monarch":{"xref_id":"0008992"}}}


id: GO:0010053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell in the root epidermis acquires the specialized features of a trichoblast or atrichoblast.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"},{"relation_name":"part_of","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"part_of","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epidermal cell differentiation","termid":"GO:0010053"}


id: PBO:0047176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 9","termid":"PBO:0047176"}


id: GO:0033770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: liquiritigenin + O2 + [reduced NADPH--hemoprotein reductase] = 2,4',7-trihydroxyisoflavanone + H2O + [oxidized NADPH--hemoprotein reductase] and (2S)-naringenin + O2 + [reduced NADPH--hemoprotein reductase] = 2,4',5,7-tetrahydroxyisoflavanone + H2O + [oxidized NADPH--hemoprotein reductase].","definition_xrefs":["EC:1.14.14.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyisoflavanone synthase activity","secondary_identifiers":["GO:0102604","GO:0102668"],"synonyms":[{"name":"isoflavonoid synthase","type":"broad"}],"termid":"GO:0033770"}


id: MONDO:0006371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineocytoma (obsolete MONDO:0006371)","termid":"MONDO:0006371","xrefs":{"Monarch":{"xref_id":"0006371"}}}


id: GO:0000987
data:
  {"annotated_genes":["SJAG_04036","SJAG_00304","SJAG_04712","SJAG_01307","SJAG_01062","SJAG_03388","SJAG_02252","SJAG_01583","SJAG_05153","SJAG_05343","SJAG_02311","SJAG_00698","SJAG_03473","SJAG_02406","SJAG_04584","SJAG_00792","SJAG_05006","SJAG_00861","SJAG_03538","SJAG_02149","SJAG_05339","SJAG_05288","SJAG_03120","SJAG_00979","SJAG_00802","SJAG_01343","SJAG_00421","SJAG_04839","SJAG_00163","SJAG_04092","SJAG_00987","SJAG_02052","SJAG_02810","SJAG_06599","SJAG_00266","SJAG_06576","SJAG_03879","SJAG_02218","SJAG_03354","SJAG_02730","SJAG_05247","SJAG_04749","SJAG_04249","SJAG_02938","SJAG_03622","SJAG_04009","SJAG_04421","SJAG_03183","SJAG_03735","SJAG_02138","SJAG_01930","SJAG_00210","SJAG_03519","SJAG_03484","SJAG_00693","SJAG_03911","SJAG_04381","SJAG_01157","SJAG_01725","SJAG_04855","SJAG_00037","SJAG_04191","SJAG_02569","SJAG_00386","SJAG_04813","SJAG_01740","SJAG_02326","SJAG_01694","SJAG_05337","SJAG_02472","SJAG_02709","SJAG_00664","SJAG_03346","SJAG_00926","SJAG_01441","SJAG_03143","SJAG_01243","SJAG_03918","SJAG_02956","SJAG_00124","SJAG_03241","SJAG_04388","SJAG_02048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89848,103346,73980,72288,74623,88788,89213,96348,101839,74686,97309,104243,98206,79526,80191,111722,76133,75482,91673,73648,71634,87779,79189,72708,99914,97311,110857,79357,73097,116281,93062,78122,113490,97312,71473,88204,105914,99292,69044,92226,103746,106529,110682,97310,94486,110665,102073,107380,108994,95455,75606,77797,69795,94503,111682,118165,77388,101279,95806,79261,114641,73901,88148,79696,108440,116418,96831,72156,71595,110698,75557,96700,102489,97308,97148,74592,73472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[106857,108615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[87934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[69438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[69439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[77325,95344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site, located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by some RNA polymerase. Cis-regulatory sites are often referred to as a sequence motifs, enhancers, or silencers.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":83,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03120":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03354":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04381":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05339":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0000976","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001150","GO:0001158","GO:0001159","GO:0000986","GO:0035326"],"synonyms":[{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase enhancer sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase upstream activating sequence (UAS) sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type cis-regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"cis-regulatory region binding","type":"related"},{"name":"core promoter proximal region DNA binding","type":"narrow"},{"name":"core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"enhancer binding","type":"related"},{"name":"enhancer sequence-specific DNA binding","type":"related"},{"name":"eubacterial-type RNA polymerase regulatory transcription factor sequence-specific DNA binding","type":"narrow"},{"name":"promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0000987","terms_by_termid":{"GO:0000978":null,"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null,"GO:0044377":null}}


id: PBO:0066443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol saturase","termid":"PBO:0066443"}


id: PBO:0000178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3a","termid":"PBO:0000178"}


id: MONDO:0006269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete liver inflammatory myofibroblastic tumor (obsolete MONDO:0006269)","termid":"MONDO:0006269","xrefs":{"Monarch":{"xref_id":"0006269"}}}


id: PBO:0082763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the small-subunit processome; required for nuclear export of tRNAs; forms a complex with Rrp7p; may facilitate binding of Utp8p to aminoacylated tRNAs and their delivery to Los1p for export; conserved from yeast to mammals","termid":"PBO:0082763"}


id: MOD:01543
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01543"}


id: MONDO:0000243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatophyte infection of the hair that infects the hair surface.","definition_xrefs":["Wikipedia:Exothrix"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectothrix infectious disease","secondary_identifiers":["DOID:0050097"],"termid":"MONDO:0000243","xrefs":{"Monarch":{"xref_id":"0000243"}}}


id: MONDO:0020196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anomaly of the secretory and excretory apparatus of the lacrimal system (obsolete MONDO:0020196)","secondary_identifiers":["Orphanet:98608"],"termid":"MONDO:0020196","xrefs":{"Monarch":{"xref_id":"0020196"}}}


id: MONDO:0008656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign paroxysmal positional nystagmus (obsolete MONDO:0008656)","termid":"MONDO:0008656","xrefs":{"Monarch":{"xref_id":"0008656"}}}


id: PATO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000727 behavioral function value (obsolete PATO:0000727)","termid":"PATO:0000727"}


id: MONDO:0008936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia and neurosensory deafness","secondary_identifiers":["MESH:C565869","UMLS:C1859304","MEDGEN:395224","OMIM:212850"],"synonyms":[{"name":"cerebellar ataxia and neurosensory deafness","type":"exact"}],"termid":"MONDO:0008936","xrefs":{"Monarch":{"xref_id":"0008936"}}}


id: FYPO:0000058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer mitochondrial nucleoids than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mitochondrial nucleoids present in decreased numbers","synonyms":[{"name":"decreased number of mitochondrial nucleoids","type":"exact"},{"name":"fewer mitochondrial nucleoids present","type":"exact"},{"name":"mitochondrial nucleoid decreased number","type":"exact"},{"name":"mitochondrial nucleoids present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondrial nucleoids present in decreased numbers during vegetative growth","type":"exact"},{"name":"mitochondrial nucleoids present in reduced numbers","type":"exact"}],"termid":"FYPO:0000058"}


id: MONDO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete plague (obsolete MONDO:0002662)","termid":"MONDO:0002662","xrefs":{"Monarch":{"xref_id":"0002662"}}}


id: GO:0097230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a potassium ion stimulus.","definition_xrefs":["PMID:21239624","GOC:pf","PMID:19363786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cellular response to potassium ion","termid":"GO:0035865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility in response to potassium ion","synonyms":[{"name":"K+ facilitation of cell motility","type":"exact"},{"name":"potassium ion facilitation of cell motility","type":"exact"}],"termid":"GO:0097230"}


id: GO:2000602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of interphase of mitotic cell cycle.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of interphase of mitotic cell cycle (obsolete GO:2000602)","synonyms":[{"name":"regulation of interphase of mitotic cell cycle","type":"exact"}],"termid":"GO:2000602"}


id: GO:0150019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a basal dendrite are generated and organized.","definition_xrefs":["PMID:22683681","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"basal dendrite development","termid":"GO:0150018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite morphogenesis","termid":"GO:0150019"}


id: PBO:0042519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2","termid":"PBO:0042519"}


id: MONDO:0017710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital systemic veins anomaly (obsolete MONDO:0017710)","secondary_identifiers":["Orphanet:3091"],"termid":"MONDO:0017710","xrefs":{"Monarch":{"xref_id":"0017710"}}}


id: GO:0072224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the metanephric glomerulus over time from its initial formation until its mature state. The metanephric glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the mature vertebrate kidney, or metanephros.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus development","termid":"GO:0032835"},{"relation_name":"part_of","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerulus development","synonyms":[{"name":"metanephric glomerular development","type":"exact"}],"termid":"GO:0072224"}


id: GO:0019285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"glycine betaine biosynthetic process","termid":"GO:0031456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process from choline","synonyms":[{"name":"N-trimethylglycine biosynthesis from choline","type":"exact"},{"name":"N-trimethylglycine biosynthetic process from choline","type":"exact"},{"name":"choline oxidation","type":"exact"},{"name":"glycine betaine anabolism from choline","type":"exact"},{"name":"glycine betaine formation from choline","type":"exact"},{"name":"glycine betaine synthesis from choline","type":"exact"}],"termid":"GO:0019285"}


id: PBO:0054941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2355","termid":"PBO:0054941"}


id: PBO:0047511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 3","termid":"PBO:0047511"}


id: PBO:0078245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 23/OR9-2 (pseudogene)","termid":"PBO:0078245"}


id: PBO:0041407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 136","termid":"PBO:0041407"}


id: MONDO:0060729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal erythropoietic protoporphyria","termid":"MONDO:0019263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0019142","MONDO:0005066","MONDO:0004335","MONDO:0005093","MONDO:0002515"],"is_obsolete":false,"name":"protoporphyria, erythropoietic, 2","secondary_identifiers":["OMIM:618015","MEDGEN:1645733","UMLS:C4693947"],"synonyms":[{"name":"EPP2","type":"related"},{"name":"protoporphyria, erythropoietic, 2","type":"exact"}],"termid":"MONDO:0060729","xrefs":{"Monarch":{"xref_id":"0060729"}}}


id: PBO:0016892
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUreobasidin A Resistance","termid":"PBO:0016892"}


id: PBO:0001279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid16 (predicted)","termid":"PBO:0001279"}


id: PBO:0076082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin","termid":"PBO:0076082"}


id: PBO:0071342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29","termid":"PBO:0071342"}


id: MONDO:1011840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 9-tetrahydrocannabinol seizure, non-human animal","secondary_identifiers":["OMIA:000267"],"termid":"MONDO:1011840","xrefs":{"Monarch":{"xref_id":"1011840"}}}


id: MONDO:1010074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XII deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XII deficiency, non-human animal","secondary_identifiers":["OMIA:000364"],"termid":"MONDO:1010074","xrefs":{"Monarch":{"xref_id":"1010074"}}}


id: MONDO:0009827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pachyonychia congenita, autosomal recessive (obsolete MONDO:0009827)","secondary_identifiers":["MESH:C538094","OMIM:260130"],"synonyms":[{"name":"pachyonychia congenita, autosomal recessive","type":"exact"}],"termid":"MONDO:0009827","xrefs":{"Monarch":{"xref_id":"0009827"}}}


id: PBO:0055432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2862","termid":"PBO:0055432"}


id: GO:0051095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of helicase activity.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of helicase activity (obsolete GO:0051095)","termid":"GO:0051095"}


id: GO:0047306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-methionine + pyruvate = 4-methylthio-2-oxobutanoate + L-alanine.","definition_xrefs":["RHEA:23836","EC:2.6.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-methionine-pyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R03001","MetaCyc:2.6.1.41-RXN"],"synonyms":[{"name":"D-methionine aminotransferase activity","type":"related"},{"name":"D-methionine transaminase activity","type":"related"},{"name":"D-methionine--pyruvate aminotransferase activity","type":"related"},{"name":"D-methionine-pyruvate aminotransferase activity","type":"exact"},{"name":"D-methionine:pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0047306"}


id: MONDO:0032798
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86718,86719],"is_not":false,"summary":null,"term":"MONDO:0032798"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"is_obsolete":false,"name":"ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facial features","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5193147","OMIM:618527","MEDGEN:1682428"],"synonyms":[{"name":"ICHTHYOTIC KERATODERMA, SPASTICITY, HYPOMYELINATION, AND DYSMORPHIC FACIAL FEATURES","type":"related"},{"name":"IKSHD","type":"related"},{"name":"ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facies","type":"exact"}],"termid":"MONDO:0032798","terms_by_termid":{"MONDO:0032798":null},"xrefs":{"Monarch":{"xref_id":"0032798"}}}


id: PBO:0064619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 1","termid":"PBO:0064619"}


id: GO:0046664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes that occur during dorsal closure of the shape and structure of the amnioserosa, an epithelium that occupies the dorsal side of the embryo.","definition_xrefs":["PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, amnioserosa morphology change","termid":"GO:0046664"}


id: MONDO:0017250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 2","secondary_identifiers":["GARD:21095","UMLS:C5437761","Orphanet:280840","icd11.foundation:1921224131","MEDGEN:1738105"],"synonyms":[{"name":"CCAM type 2","type":"exact"},{"name":"CPAM type 2","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 2","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 2","type":"exact"},{"name":"congenital cystic disease of the lung type 2","type":"exact"}],"termid":"MONDO:0017250","xrefs":{"Monarch":{"xref_id":"0017250"}}}


id: PBO:0030109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_methionine_import","termid":"PBO:0030109"}


id: PBO:0089855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15","termid":"PBO:0089855"}


id: GO:0015627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex, containing 12-15 subunits, that spans the cell envelope of Gram-negative bacteria and mediates the movement of proteins into the extracellular environment. The complex includes a component in the cytoplasm, an inner membrane subcomplex that reaches into the periplasmic compartment and a secretion pore in the outer membrane. Proteins using the Type II pathway are transported across the cytoplasmic membrane by the Sec or Tat complex.","definition_xrefs":["PMID:16448494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"type II protein secretion system complex","synonyms":[{"name":"MTB","type":"exact"},{"name":"Sec-dependent secretion system-associated complex","type":"related"},{"name":"T2SS-associated complexes","type":"exact"},{"name":"general secretion pathway-associated complex","type":"related"},{"name":"main terminal branch","type":"exact"}],"termid":"GO:0015627"}


id: PBO:0082728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and pre-replicative complexes (pre-RCs); required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-RC formation and maintenance during DNA replication licensing; highly conserved protein which contains several WD40 motifs; IPI3 is an essential gene; other members include Rix1p, Ipi1p, and Ipi3p","termid":"PBO:0082728"}


id: PBO:0024851
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae STE6","termid":"PBO:0024851"}


id: MONDO:0019897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 12","termid":"MONDO:0016877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 12q","secondary_identifiers":["Orphanet:96149","MEDGEN:1761314","UMLS:C5438460","GARD:19328"],"synonyms":[{"name":"distal deletion 12q","type":"exact"},{"name":"distal monosomy type 12q","type":"exact"},{"name":"monosomy 12qter","type":"exact"},{"name":"telomeric deletion 12q","type":"exact"}],"termid":"MONDO:0019897","xrefs":{"Monarch":{"xref_id":"0019897"}}}


id: PBO:0074455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine oxidase","termid":"PBO:0074455"}


id: MONDO:0006990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intraocular infection caused mainly by pus-producing bacteria and rarely by fungi. The infection may be caused by an injury or surgical wound (exogenous) or by endogenous septic emboli in such diseases as bacterial endocarditis or meningococcemia.","definition_xrefs":["MESH:D015829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"suppurative uveitis","secondary_identifiers":["MEDGEN:22598","UMLS:C0042168","DOID:13140"],"termid":"MONDO:0006990","xrefs":{"Monarch":{"xref_id":"0006990"}}}


id: PATO:0001635
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being essential or indispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity (continuant)","termid":"PATO:0001634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (continuant)","termid":"PATO:0001635"}


id: FYECO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which methylamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ methylamine","termid":"FYECO:0000121"}


id: PBO:0089176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi tether Uso1","termid":"PBO:0089176"}


id: MONDO:0007759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hyperlipidemia, familial combined, LPL related","secondary_identifiers":["OMIM:144250","MEDGEN:6965","GARD:15077","UMLS:C0020474"],"synonyms":[{"name":"FCHL","type":"related"},{"name":"combined hyperlipidemia, familial","type":"exact"},{"name":"familial combined hyperlipidemia","type":"related"},{"name":"hyperlipidemia, familial combined","type":"related"}],"termid":"MONDO:0007759","xrefs":{"Monarch":{"xref_id":"0007759"}}}


id: PBO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart disease","termid":"PBO:0002803"}


id: GO:0009140
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate catabolic process","termid":"GO:0009134"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine nucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine nucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine nucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009140","terms_by_termid":{"GO:0006256":null}}


id: GO:0047003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-6-deoxy-L-talose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + H+ + NADPH.","definition_xrefs":["RHEA:23648","EC:1.1.1.134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dTDP-6-deoxy-L-talose 4-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.134-RXN","KEGG_REACTION:R02776"],"synonyms":[{"name":"TDP-6-deoxy-L-talose dehydrogenase activity","type":"related"},{"name":"dTDP-6-deoxy-L-talose dehydrogenase (4-reductase)","type":"related"},{"name":"dTDP-6-deoxy-L-talose:NADP+ 4-oxidoreductase activity","type":"related"},{"name":"thymidine diphospho-6-deoxy-L-talose dehydrogenase activity","type":"related"}],"termid":"GO:0047003"}


id: SO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Regions of a few hundred to a few thousand bases in vertebrate genomes that are relatively GC and CpG rich; they are typically unmethylated and often found near the 5' ends of genes.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CpG_island","secondary_identifiers":["http://en.wikipedia.org/wiki/CpG_island"],"synonyms":[{"name":"CG island","type":"exact"},{"name":"CpG island","type":"exact"}],"termid":"SO:0000307"}


id: PBO:0003996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C (PKC)-like Pck2","termid":"PBO:0003996"}


id: PBO:0066710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 7","termid":"PBO:0066710"}


id: PBO:0078176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-1","termid":"PBO:0078176"}


id: GO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + 2-oxoglutarate + O2 = a flavone + succinate + CO2 + H2O.","definition_xrefs":["EC:1.14.20.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"flavone synthase activity","secondary_identifiers":["RHEA:10448","MetaCyc:RXN-8000"],"synonyms":[{"name":"FNS I","type":"related"},{"name":"flavanone,2-oxoglutarate:oxygen oxidoreductase (dehydrating) activity","type":"related"},{"name":"flavone synthase I activity","type":"related"}],"termid":"GO:0033759"}


id: GO:0071976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility that results in the smooth movement of a cell along a solid surface.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell gliding","synonyms":[{"name":"cell gliding motility","type":"exact"}],"termid":"GO:0071976"}


id: MONDO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder marked by obstruction of conducting airways of the lung. airway obstruction may be acute, chronic, intermittent, or persistent.","definition_xrefs":["MESH:D008173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstructive lung disease","secondary_identifiers":["MEDGEN:1387","DOID:2320","UMLS:C0001883"],"synonyms":[{"name":"respiratory airway obstruction","type":"exact"}],"termid":"MONDO:0002267","xrefs":{"Monarch":{"xref_id":"0002267"}}}


id: PBO:0050399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 4","termid":"PBO:0050399"}


id: PBO:0108958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_insertion_and_mutation","termid":"PBO:0108958"}


id: PBO:0030758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_miconazole","termid":"PBO:0030758"}


id: PBO:0070802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 32","termid":"PBO:0070802"}


id: PBO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_in_stationary_phase","termid":"PBO:0030923"}


id: PBO:0054413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1809","termid":"PBO:0054413"}


id: GO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a monocyte expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["GOC:add","PMID:11200054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte antigen processing and presentation","termid":"GO:0002471"}


id: PBO:0018212
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARP","termid":"PBO:0018212"}


id: FYPO:0009002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitochondrion distribution phenotype observed during mitotic interphase in which the length fraction of cytoplasmic microtubules that is bound to mitochondria is increased with respect to the wild type.","definition_xrefs":["PMID:36633091","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular mitochondrion distribution","termid":"FYPO:0000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased mitochondrial-associated microtubule fraction during mitotic interphase","synonyms":[{"name":"increased microtubule-associated mitochondrial fraction during mitotic interphase","type":"related"}],"termid":"FYPO:0009002"}


id: MONDO:1010978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, sheep","secondary_identifiers":["OMIA:000485-9940"],"termid":"MONDO:1010978","xrefs":{"Monarch":{"xref_id":"1010978"}}}


id: PBO:0029848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029848"}


id: GO:0034162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 9.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 9 signaling pathway","secondary_identifiers":["Reactome:R-HSA-168138"],"synonyms":[{"name":"TLR9 signaling pathway","type":"exact"},{"name":"toll-like receptor 9 signalling pathway","type":"exact"}],"termid":"GO:0034162"}


id: GO:0090158
data:
  {"annotated_genes":["SJAG_03795","SJAG_05289","SJAG_00906","SJAG_01437","SJAG_04413","SJAG_00053","SJAG_03558","SJAG_03170","SJAG_02763","SJAG_01460","SJAG_02595","SJAG_02683","SJAG_01848","SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71549,73349,73834,90160,93431,108533,112517,119309],"is_not":false,"summary":null,"term":"GO:0090158"},{"annotations":[77985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[118397,103247,108444,114774,108364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990809"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an endoplasmic reticulum membrane.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00906":null,"SJAG_01437":null,"SJAG_01460":null,"SJAG_01848":null,"SJAG_02595":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_03170":null,"SJAG_03558":null,"SJAG_03795":null,"SJAG_03812":null,"SJAG_04413":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"endoplasmic reticulum membrane organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:26774782":null},"synonyms":[{"name":"endoplasmic reticulum membrane organisation","type":"exact"}],"termid":"GO:0090158","terms_by_termid":{"GO:0016320":null,"GO:0090158":null,"GO:1990809":null}}


id: PBO:0091098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal importomer complex subunit Pex8","termid":"PBO:0091098"}


id: GO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal digestive tract development","termid":"GO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic ectodermal digestive tract development","synonyms":[{"name":"post-embryonic ectodermal gut development","type":"related"}],"termid":"GO:0048612"}


id: GO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to magnetoception in which an electrical stimulus is received and converted into a molecular signal. The stimulus is in the form of an induced electric field resulting from movement in a magnetic field.","definition_xrefs":["GOC:tb","Wikipedia:Magnetoception","PMID:15886990","GOC:dph","GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"magnetoreception by sensory perception of electrical stimulus","termid":"GO:0050978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in magnetoreception","synonyms":[{"name":"detection of electrical stimulus during magnetoreception","type":"related"},{"name":"magnetoception, sensory transduction of electrical stimulus","type":"exact"},{"name":"magnetoreception, detection of electrical stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of electrical stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during magnetoreception","type":"related"},{"name":"sensory transduction of electrical stimulus during magnetoreception","type":"related"}],"termid":"GO:0050970"}


id: PBO:0067141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 189, pseudogene","termid":"PBO:0067141"}


id: PBO:0016927
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae NSR1","termid":"PBO:0016927"}


id: MONDO:0003912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare uveal melanoma that arises from the ciliary body. Patients may present with blurred vision, visual field loss, floaters, and ocular pain. The prognosis is usually poor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary body cancer","termid":"MONDO:0002969"},{"relation_name":"is_a","term_name":"iris melanoma","termid":"MONDO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"malignant ciliary body melanoma","secondary_identifiers":["SCTID:255015006","UMLS:C0346379","NCIT:C4558","MONDO:0021434","DOID:6524","MEDGEN:138062","ICD9:190.8"],"synonyms":[{"name":"ciliary body malignant melanoma","type":"exact"},{"name":"ciliary body melanoma","type":"exact"},{"name":"ciliary body melanoma (disease)","type":"exact"},{"name":"malignant melanoma of ciliary body","type":"exact"},{"name":"malignant melanoma of the ciliary body","type":"exact"},{"name":"melanoma (disease) of ciliary body","type":"exact"},{"name":"melanoma of ciliary body","type":"exact"},{"name":"melanoma of the ciliary body","type":"exact"}],"termid":"MONDO:0003912","xrefs":{"Monarch":{"xref_id":"0003912"}}}


id: GO:0008571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. This is a highly diverse group of enzymes that perform many functions that are similar to those of chaperonins. They comprise a number of heat-shock-cognate proteins. They are also active in clathrin uncoating and in the oligomerization of actin.","definition_xrefs":["EC:3.6.4.10"],"gene_count":0,"genotype_count":0,"name":"obsolete non-chaperonin molecular chaperone ATPase activity (obsolete GO:0008571)","synonyms":[{"name":"non-chaperonin molecular chaperone ATPase activity","type":"exact"}],"termid":"GO:0008571"}


id: PBO:0002773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c (proteolipid subunit)","termid":"PBO:0002773"}


id: PBO:0029923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-GGPP_absent_from_cell","termid":"PBO:0029923"}


id: PBO:0062572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily C member 1","termid":"PBO:0062572"}


