# terms

id: PBO:0084524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs family (Chs5p-Arf1p-binding proteins); members include Bch1p, Bch2p, Bud7p, and Chs6p; ChAPs family proteins form the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; BUD7 has a paralog, BCH1, that arose from the whole genome duplication","termid":"PBO:0084524"}


id: PBO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene, transcription factor","termid":"PBO:0060233"}


id: PBO:0082431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Boron efflux transporter of the plasma membrane; binds HCO3-, I-, Br-, NO3- and Cl-; has similarity to the characterized boron efflux transporter A. thaliana BOR1","termid":"PBO:0082431"}


id: PATO:0000847
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000847 absolute auditory acuity (obsolete PATO:0000847)","termid":"PATO:0000847"}


id: PBO:0061864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized low density lipoprotein receptor 1","termid":"PBO:0061864"}


id: GO:0035081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by hormones that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death","termid":"GO:0012502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by hormones","termid":"GO:0035081"}


id: PBO:0087696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; interacts with Spp1p and with trimethylated histone H3; phosphorylated by Cdc28p","termid":"PBO:0087696"}


id: SO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a primary transcript that is transcribed, but removed from within the transcript by splicing together the sequences (exons) on either side of it.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Intron"],"synonyms":[{"name":"INSDC_feature:intron","type":"exact"}],"termid":"SO:0000188"}


id: PR:O94297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11712:SF23","PRO:DNx","OMA:SCHPO03764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.13c","secondary_identifiers":["UniProtKB:O94297"],"synonyms":[{"name":"Spom972h-OXSM","type":"exact"},{"name":"beta-ketoacyl-ACP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mtKAS (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94297"}


id: MONDO:0008688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"WT limb-blood syndrome is characterized by hematological anomalies (Fanconi anemia, leukemia and lymphoma) often appearing during childhood. Anomalies of the limbs and hands are also present: bifid or hypoplastic thumbs, cutaneous syndactyly, and ulnar and radial defects. The syndrome has been described in several families. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:3466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"WT limb-blood syndrome","secondary_identifiers":["icd11.foundation:1407849410","SCTID:719019000","MEDGEN:231231","GARD:39","OMIM:194350","UMLS:C1327917","MESH:C536751"],"synonyms":[{"name":"WT limb blood syndrome","type":"related"},{"name":"WT limb-blood syndrome","type":"exact"},{"name":"WTsyndrome","type":"related"},{"name":"radial-ulnar hypoplasia with bone marrow failure and/or leukaemia","type":"related"},{"name":"radial-ulnar hypoplasia with bone marrow failure and/or leukemia","type":"related"}],"termid":"MONDO:0008688","xrefs":{"Monarch":{"xref_id":"0008688"}}}


id: PBO:0003451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdc27","termid":"PBO:0003451"}


id: PBO:0025455
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperoxaluria","termid":"PBO:0025455"}


id: PBO:0060439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 8","termid":"PBO:0060439"}


id: PBO:0042151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 13","termid":"PBO:0042151"}


id: GO:0043946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0043946)","synonyms":[{"name":"activation of enzyme activity in other organism","type":"narrow"},{"name":"activation of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation of catalytic activity in other organism during symbiotic interaction","type":"related"},{"name":"up regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"upregulation of enzyme activity in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0043946"}


id: GO:1902622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil migration.","definition_xrefs":["PMID:1826836","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil migration","termid":"GO:1902622"}


id: PBO:0081250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 22","termid":"PBO:0081250"}


id: GO:0043145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The endonucleolytic cleavage of snoRNA 3' ends, which is required for mature snoRNAs to be functional.","definition_xrefs":["GOC:go_curators","PMID:12773397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"sno(s)RNA 3'-end cleavage","synonyms":[{"name":"sRNA 3'-end cleavage","type":"narrow"},{"name":"sno(s)RNA 3' end cleavage","type":"exact"},{"name":"snoRNA 3'-end cleavage","type":"narrow"}],"termid":"GO:0043145"}


id: MONDO:0037735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the sebaceous gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"sebaceous gland neoplasm","termid":"MONDO:0006963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"sebaceous gland cancer","secondary_identifiers":["MEDGEN:235134","NCIT:C8409","UMLS:C1382026"],"synonyms":[{"name":"cancer of sebaceous gland","type":"exact"},{"name":"malignant neoplasm of sebaceous gland","type":"exact"},{"name":"malignant neoplasm of the sebaceous gland","type":"exact"},{"name":"malignant sebaceous gland neoplasm","type":"exact"},{"name":"malignant sebaceous gland tumor","type":"exact"},{"name":"malignant sebaceous gland tumour","type":"exact"},{"name":"malignant sebaceous neoplasm","type":"exact"},{"name":"malignant sebaceous tumor","type":"exact"},{"name":"malignant sebaceous tumour","type":"exact"},{"name":"malignant tumor of sebaceous gland","type":"exact"},{"name":"malignant tumor of the sebaceous gland","type":"exact"},{"name":"malignant tumour of sebaceous gland","type":"exact"},{"name":"malignant tumour of the sebaceous gland","type":"exact"}],"termid":"MONDO:0037735","xrefs":{"Monarch":{"xref_id":"0037735"}}}


id: GO:0008345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a larval (immature) organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval locomotory behavior","synonyms":[{"name":"larval locomotory behaviour","type":"exact"}],"termid":"GO:0008345"}


id: PBO:0062547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily L member 1 pseudogene","termid":"PBO:0062547"}


id: PBO:0057446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 564","termid":"PBO:0057446"}


id: PR:O42839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13260:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.01c","secondary_identifiers":["UniProtKB:O42839"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC19G12.01c","type":"related"},{"name":"Spom972h-ANAPC4","type":"exact"},{"name":"apc4","type":"related"},{"name":"cell untimely torn protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid1","type":"related"}],"termid":"PR:O42839"}


id: GO:0003156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of animal organ formation. Organ formation is the process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of animal organ formation","termid":"GO:0003156"}


id: FYPO:0004954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more prospore membrane than normal. Excess prospore membrane may take the form of bubble-like structures continuous with the rest of the membrane.","definition_xrefs":["PMID:17951524","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane","termid":"FYPO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000121","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"excess prospore membrane present","synonyms":[{"name":"excess forespore membrane present","type":"exact"},{"name":"forespore membrane bubble formation","type":"related"},{"name":"prospore membrane present in greater amount","type":"exact"}],"termid":"FYPO:0004954"}


id: PBO:0057668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260a","termid":"PBO:0057668"}


id: PBO:0031445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_double-strand_break_repair","termid":"PBO:0031445"}


id: PBO:0085334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine decarboxylase of the mitochondrial inner membrane; converts phosphatidylserine to phosphatidylethanolamine; regulates mitochondrial fusion and morphology; partly exposed to the mitochondrial intermembrane space; ER-localized fraction is involved in formation of lipid droplets; autocatalytically processed","termid":"PBO:0085334"}


id: GO:2001295
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65688],"is_not":false,"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.","definition_xrefs":["GOC:yaf","UniPathway:UPA00655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"malonyl-CoA metabolic process","termid":"GO:2001293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"malonyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"malonyl-CoA anabolism","type":"exact"},{"name":"malonyl-CoA biosynthesis","type":"exact"},{"name":"malonyl-CoA formation","type":"exact"},{"name":"malonyl-CoA synthesis","type":"exact"}],"termid":"GO:2001295","terms_by_termid":{"GO:2001295":null}}


id: PBO:0055159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2578","termid":"PBO:0055159"}


id: GO:0072379
data:
  {"annotated_genes":["SJAG_01496","SJAG_03865"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79157,114901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072380"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the post-translational delivery of tail-anchored (TA) membrane proteins to the endoplasmic reticulum. TA membrane proteins, also called type II transmembrane proteins, contain a single C-terminal transmembrane region. Some ER membrane insertion complex subunits are conserved between different species such as mammals and budding yeast.","definition_xrefs":["GOC:mah","PMID:20850366","PMID:20676083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01496":null,"SJAG_03865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ER membrane insertion complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endoplasmic reticulum membrane insertion complex","type":"exact"}],"termid":"GO:0072379","terms_by_termid":{"GO:0072380":null}}


id: PBO:0060466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NALCN channel auxiliary factor 2","termid":"PBO:0060466"}


id: GO:0086089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an atrial cardiomyocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:0086089"}


id: GO:0032057
data:
  {"annotated_genes":["SJAG_00786","SJAG_02592","SJAG_00690","SJAG_03869","SJAG_00169","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69580,74920,94126,109473,99122,115423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation initiation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"part_of","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of translation initiation in response to stress","type":"exact"},{"name":"down-regulation of translation initiation in response to stress","type":"exact"},{"name":"downregulation of translation initiation in response to stress","type":"exact"},{"name":"inhibition of translation initiation in response to stress","type":"narrow"}],"termid":"GO:0032057","terms_by_termid":{"GO:1990625":null}}


id: GO:1901171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of naphthalene.","definition_xrefs":["GOC:yaf","UniPathway:UPA00082","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene biosynthetic process (obsolete GO:1901171)","synonyms":[{"name":"naphthalene anabolism","type":"exact"},{"name":"naphthalene biosynthesis","type":"exact"},{"name":"naphthalene formation","type":"exact"},{"name":"naphthalene synthesis","type":"exact"}],"termid":"GO:1901171"}


id: GO:0051879
data:
  {"annotated_genes":["SJAG_01914","SJAG_00112","SJAG_03717","SJAG_03955","SJAG_03784","SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73606,74675,76273,76425,77563,79517],"is_not":false,"summary":null,"term":"GO:0051879"}]},"cv_name":"molecular_function","definition":"Binding to Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock protein binding","termid":"GO:0031072"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00750":null,"SJAG_01914":null,"SJAG_03717":null,"SJAG_03784":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"Hsp90 protein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Hsp90 binding","type":"exact"},{"name":"Hsp90 class protein binding","type":"exact"}],"termid":"GO:0051879","terms_by_termid":{"GO:0051879":null}}


id: GO:0072746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetracycline stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to tetracycline","termid":"GO:1901326"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tetracycline","termid":"GO:0072746"}


id: PBO:0071966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A5","termid":"PBO:0071966"}


id: PBO:0067880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 182","termid":"PBO:0067880"}


id: PBO:0002568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Aspartic acid","termid":"PBO:0002568"}


id: MONDO:0032634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 31","secondary_identifiers":["UMLS:C4748838","MEDGEN:1648395","GARD:16331","OMIM:618251","DOID:0112071"],"synonyms":[{"name":"MC1DN31","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 31","type":"related"}],"termid":"MONDO:0032634","xrefs":{"Monarch":{"xref_id":"0032634"}}}


id: MONDO:0007663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma with elevated episcleral venous pressure","secondary_identifiers":["UMLS:C1842030","OMIM:137700","MEDGEN:333975","MESH:C564235"],"synonyms":[{"name":"glaucoma with elevated episcleral venous pressure","type":"exact"}],"termid":"MONDO:0007663","xrefs":{"Monarch":{"xref_id":"0007663"}}}


id: PBO:0039285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 14, pseudogene","termid":"PBO:0039285"}


id: PBO:0090520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase","termid":"PBO:0090520"}


id: MONDO:0008922
data:
  {"annotated_genes":["SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85443],"is_not":false,"summary":null,"term":"MONDO:0008922"}]},"cv_name":"mondo","definition":"Congenital cataract - hypertrophic cardiomyopathy - mitochrondrial myopathy (CCM) is a mitochondrial disease characterized by cataracts, hypertrophic cardiomyopathy, muscle weakness and lactic acidosis after exercise.","definition_xrefs":["Orphanet:1369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005267","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Sengers syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:395228","OMIM:212350","MESH:C538280","SCTID:717812000","DOID:0080132","UMLS:C1859317","GARD:1142"],"synonyms":[{"name":"Sengers syndrome","type":"exact"},{"name":"cardiomyopathic mitochondrial DNA depletion syndrome 10","type":"related"},{"name":"cardiomyopathy and cataract","type":"related"},{"name":"cataract and cardiomyopathy","type":"related"},{"name":"congenital cataract-hypertrophic cardiomyopathy-mitochondrial myopathy syndrome","type":"related"},{"name":"mitochondrial DNA depletion syndrome 10","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 10 (Cardiomyopathic type)","type":"related"}],"termid":"MONDO:0008922","terms_by_termid":{"MONDO:0008922":null},"xrefs":{"Monarch":{"xref_id":"0008922"}}}


id: PBO:0054005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1333","termid":"PBO:0054005"}


id: FYPO:0003920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"increased replication fork arrest at mating-type locus","synonyms":[{"name":"increased replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003920"}


id: MONDO:0013045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mycobacterium tuberculosis, susceptibility","termid":"MONDO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium tuberculosis, susceptibility to, 3","secondary_identifiers":["OMIM:612929","UMLS:C2752035","MEDGEN:416690"],"synonyms":[{"name":"MTBS3","type":"related"},{"name":"Mycobacterium tuberculosis, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0013045","xrefs":{"Monarch":{"xref_id":"0013045"}}}


id: GO:0008636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of the activity of a caspase, a group of cysteine proteases involved in apoptosis, by the addition of a phosphate group.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jl","Wikipedia:Caspase","PMID:14744432"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of caspase activity by protein phosphorylation (obsolete GO:0008636)","synonyms":[{"name":"activation of caspase activity by protein amino acid phosphorylation","type":"exact"},{"name":"activation of caspase activity by protein phosphorylation","type":"exact"},{"name":"caspase activation via phosphorylation","type":"exact"}],"termid":"GO:0008636"}


id: MONDO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glomerulopathy with fibronectin deposits (obsolete MONDO:0000034)","termid":"MONDO:0000034","xrefs":{"Monarch":{"xref_id":"0000034"}}}


id: PBO:0060696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 4","termid":"PBO:0060696"}


id: PBO:0069822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1108, pseudogene","termid":"PBO:0069822"}


id: GO:1902967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle midzone.","definition_xrefs":["PMID:16824200","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitotic spindle","termid":"GO:1902480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mitotic spindle midzone","synonyms":[{"name":"protein localisation in mitotic spindle midzone","type":"exact"},{"name":"protein localisation to mitotic spindle midzone","type":"exact"},{"name":"protein localization in mitotic spindle midzone","type":"exact"}],"termid":"GO:1902967"}


id: PBO:0054255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1639","termid":"PBO:0054255"}


id: GO:0004182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidyl-L-amino acid + H2O = peptide + L-amino acid. Little or no action with -Asp, -Glu, -Arg, -Lys or -Pro.","definition_xrefs":["EC:3.4.17.1"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase A activity (obsolete GO:0004182)","synonyms":[{"name":"carboxypeptidase A activity","type":"exact"},{"name":"carboxypolypeptidase activity","type":"related"},{"name":"pancreatic carboxypeptidase A","type":"related"},{"name":"tissue carboxypeptidase A","type":"related"}],"termid":"GO:0004182"}


id: GO:0015850
data:
  {"annotated_genes":["SJAG_01590","SJAG_02962","SJAG_00261","SJAG_00671","SJAG_01722","SJAG_03595","SJAG_04506","SJAG_03808","SJAG_03718","SJAG_02323","SJAG_00355","SJAG_01407","SJAG_01329","SJAG_02375","SJAG_02152","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[71673,76890,61984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[88157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[72618,71791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"},{"annotations":[89888,89889,117281,118559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[118560,117282,89890,89891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[89892,118561,89893,117283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[108007,94008,109167,111127,116031,102402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of an organic hydroxy compound (organic alcohol) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An organic hydroxy compound is an organic compound having at least one hydroxy group attached to a carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_00671":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02152":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02962":null,"SJAG_03595":null,"SJAG_03652":null,"SJAG_03718":null,"SJAG_03808":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"organic hydroxy compound transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"organic alcohol transport","type":"exact"}],"termid":"GO:0015850","terms_by_termid":{"GO:0015918":null,"GO:0032366":null,"GO:0120011":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1904679":null,"GO:1990556":null}}


id: GO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:mah","GOC:txnOH","PMID:19104072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0001079"},{"relation_name":"is_a","term_name":"nitrogen catabolite repression of transcription","termid":"GO:0090295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"nitrogen catabolite repression of transcription from RNA polymerase II promoter","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter by nitrogen catabolites","type":"exact"}],"termid":"GO:0001081"}


id: GO:0007395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Dorsally-directed movement of a cell at the leading edge of the epithelium over the amnioserosa.","definition_xrefs":["PMID:12147138","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, spreading of leading edge cells","termid":"GO:0007395"}


id: PBO:0027341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_primase_activity","termid":"PBO:0027341"}


id: GO:0004368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.","definition_xrefs":["EC:1.1.5.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (quinone) activity","secondary_identifiers":["RHEA:18977","MetaCyc:RXN-15745","Reactome:R-HSA-188467"],"synonyms":[{"name":"FAD-dependent glycerol-3-phosphate dehydrogenase","type":"related"},{"name":"L-glycerophosphate dehydrogenase activity","type":"related"},{"name":"flavin-linked glycerol-3-phosphate dehydrogenase","type":"related"},{"name":"glycerol-3-phosphate CoQ reductase","type":"related"},{"name":"glycerophosphate dehydrogenase activity","type":"related"},{"name":"sn-glycerol-3-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0004368"}


id: PBO:0078593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 6, Y-linked","termid":"PBO:0078593"}


id: PBO:0054986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2400","termid":"PBO:0054986"}


id: PBO:0030166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_swollen_cell","termid":"PBO:0030166"}


id: MONDO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism","termid":"MONDO:0004425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic diffuse goiter","secondary_identifiers":["ICD9:242.00","SCTID:267374005","UMLS:C0342122","DOID:10719","MEDGEN:488851"],"termid":"MONDO:0001104","xrefs":{"Monarch":{"xref_id":"0001104"}}}


id: GO:1902349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloroquine stimulus.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:23922869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chloroquine","termid":"GO:1902349"}


id: GO:0090253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the wing epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090253"}


id: PBO:0091362
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by human KRAS","termid":"PBO:0091362"}


id: PBO:0035708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035708"}


id: FYPO:0000403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased duration of mitotic G2/M phase transition (obsolete FYPO:0000403)","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased duration","type":"related"},{"name":"increased duration of cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"increased duration of mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000403"}


id: PBO:0055401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2831","termid":"PBO:0055401"}


id: PBO:0040603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B melanoma antigen","termid":"PBO:0040603"}


id: PBO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 3","termid":"PBO:0061984"}


id: PBO:0067793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 95","termid":"PBO:0067793"}


id: GO:0004748
data:
  {"annotated_genes":["SJAG_02948","SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71540],"is_not":false,"summary":null,"term":"GO:0004748"},{"annotations":[92199,107063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["EC:1.17.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase activity","termid":"GO:0061731"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-111804","RHEA:23252","GO:0016961","MetaCyc:RIBONUCLEOSIDE-DIP-REDUCTI-RXN","GO:0016959","Reactome:R-HSA-111751","GO:0016960"],"synonyms":[{"name":"2'-deoxyribonucleoside-diphosphate:oxidized-thioredoxin 2'-oxidoreductase activity","type":"related"},{"name":"2'-deoxyribonucleoside-diphosphate:thioredoxin-disulfide 2'-oxidoreductase activity","type":"related"}],"termid":"GO:0004748","terms_by_termid":{"GO:0004748":null,"GO:0051063":null}}


id: PBO:0081788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 716","termid":"PBO:0081788"}


id: PBO:0035782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_activation_of_protein_kinase_activity_during_mitosis","termid":"PBO:0035782"}


id: PBO:0087548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauA domain of TFIIIC that binds BoxA DNA promoter sites of tRNA and similar genes; has TPR motifs; human homolog is TFIIIC-102","termid":"PBO:0087548"}


id: GO:0001408
data:
  {"annotated_genes":["SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"}]},"cv_name":"biological_process","definition":"The directed movement of guanine nucleotides, GTP, GDP, and/or GMP, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"guanine nucleotide transport","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0001408","terms_by_termid":{"GO:1903790":null}}


id: PBO:0053425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 367","termid":"PBO:0053425"}


id: MONDO:0008041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"myoclonic epilepsy, Hartung type","secondary_identifiers":["MESH:C563550","MEDGEN:371857","UMLS:C1834581","OMIM:159600"],"synonyms":[{"name":"myoclonic epilepsy, Hartung type","type":"exact"}],"termid":"MONDO:0008041","xrefs":{"Monarch":{"xref_id":"0008041"}}}


id: PBO:0073788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 8","termid":"PBO:0073788"}


id: GO:0000463
data:
  {"annotated_genes":["SJAG_02275","SJAG_03425","SJAG_01606","SJAG_05190","SJAG_02374","SJAG_04492","SJAG_04108","SJAG_00749","SJAG_01581","SJAG_04669","SJAG_05223","SJAG_03789","SJAG_01821","SJAG_02427","SJAG_00722","SJAG_02830","SJAG_00882","SJAG_01551","SJAG_00752","SJAG_04289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70004,70793,71895,71963,72916,73136,73418,73822,74759,74929,75619,77957,78378,79501,97723,97757],"is_not":false,"summary":null,"term":"GO:0000463"},{"annotations":[91453,94718,103902,71010],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01821":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02427":null,"SJAG_02830":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_04108":null,"SJAG_04289":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_05190":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000463","terms_by_termid":{"GO:0000448":null,"GO:0000463":null}}


id: MONDO:0957217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical dysplasia, complex, with other brain malformations 12","secondary_identifiers":["OMIM:620316","MEDGEN:1841043","UMLS:C5830407"],"termid":"MONDO:0957217","xrefs":{"Monarch":{"xref_id":"0957217"}}}


id: PBO:0044388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily AC member 1, pseudogene","termid":"PBO:0044388"}


id: FYPO:0008200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a lower extent than normal at the centromere inner repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}


id: PBO:0048116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 4","termid":"PBO:0048116"}


id: PBO:0060134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 35","termid":"PBO:0060134"}


id: GO:0072564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular component organization process in which microparticles bud off from a parent cell. A microparticle is a phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell.","definition_xrefs":["GOC:mah","PMID:16373184","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood microparticle formation","synonyms":[{"name":"microparticle generation","type":"exact"},{"name":"microparticle release","type":"exact"}],"termid":"GO:0072564"}


id: PBO:0091953
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-Coil protein Quantitatively enriched","termid":"PBO:0091953"}


id: GO:1903740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:25359770","GO_REF:0000059","GOC:rn"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidate phosphatase activity (obsolete GO:1903740)","synonyms":[{"name":"activation of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidate phosphatase activity","type":"narrow"},{"name":"activation of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"positive regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"upregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903740"}


id: GO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mature B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"regulates","term_name":"mature B cell apoptotic process","termid":"GO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mature B cell apoptotic process","synonyms":[{"name":"regulation of mature B cell apoptosis","type":"narrow"}],"termid":"GO:0002905"}


id: PBO:0016530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Puf Family protein","termid":"PBO:0016530"}


id: MONDO:0019461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of prolymphocytes affecting the blood, bone marrow, and spleen. It is characterized by prolymphocytes exceeding 55% of the lymphoid cells in the blood and profound splenomegaly.","definition_xrefs":["MESH:D054403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolymphocytic leukemia","termid":"MONDO:0001023"},{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"},{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B-cell prolymphocytic leukemia","secondary_identifiers":["ICDO:9833/3","ONCOTREE:BPLL","EFO:1000102","Orphanet:86852","icd11.foundation:1997215876","NCIT:C4753","SCTID:277619001","GARD:8223","MEDGEN:105396","UMLS:C0475801","DOID:0081041"],"synonyms":[{"name":"B prolymphocytic leukaemia","type":"exact"},{"name":"B prolymphocytic leukemia","type":"exact"},{"name":"B-PLL","type":"exact"},{"name":"B-cell prolymphocytic leukemia","type":"exact"},{"name":"BPLL","type":"related"}],"termid":"MONDO:0019461","xrefs":{"Monarch":{"xref_id":"0019461"}}}


id: PBO:0029395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029395"}


id: PBO:0046596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 6","termid":"PBO:0046596"}


id: PBO:0028956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_septated_vegetative_cell","termid":"PBO:0028956"}


id: RO:0002556
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_host","termid":"RO:0002454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pathogen_of","termid":"RO:0002556"}


id: SO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene derived from a T-cell receptor gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_pseudogene","termid":"SO:0002097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_cell_receptor_pseudogene","termid":"SO:0002099"}


id: MONDO:0800394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the MERTK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"MERTK-related retinopathy","termid":"MONDO:0800394","xrefs":{"Monarch":{"xref_id":"0800394"}}}


id: PBO:0038494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 5","termid":"PBO:0038494"}


id: FYPO:0004147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxine:NADP 4-dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal pyridoxine:NADP 4-dehydrogenase activity","termid":"FYPO:0004145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"increased pyridoxine:NADP 4-dehydrogenase activity","termid":"FYPO:0004147"}


id: PBO:0059018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 7","termid":"PBO:0059018"}


id: PBO:0004578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex subunit (predicted)","termid":"PBO:0004578"}


id: MOD:01383
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues and oxidizes a sulfur to form L-cystine S-oxide.","definition_xrefs":["RESID:AA0457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide crosslinked residues","termid":"MOD:00689"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cystine S-oxide","synonyms":[{"name":"(2R)-2-amino-3-[([(2R)-2-amino-2-carboxyethyl]sulfanyl)sulfinyl]propanoic acid","type":"exact"},{"name":"CROSSLNK S-cysteinyl 3-(oxidosulfanyl)alanine (Cys-Cys)","type":"exact"},{"name":"L-cystine S-oxide","type":"exact"},{"name":"S-[(2R)-2-amino-3-oxopropyl] (2R)-2-amino-3-oxopropane-1-sulfinothioate","type":"exact"},{"name":"S-cysteinyl 3-(oxidosulfanyl)alanine","type":"exact"},{"name":"cystine sulfoxide","type":"exact"}],"termid":"MOD:01383"}


id: PBO:0077104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM9 pseudogene 2","termid":"PBO:0077104"}


id: MONDO:0021251
data:
  {"annotated_genes":["SJAG_01419","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84799,87016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the endometrium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"is_obsolete":false,"name":"endometrium neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3012","ICD9:239.5","SCTID:123844007","UMLS:C0014170","MEDGEN:8619","MESH:D016889"],"synonyms":[{"name":"endometrial neoplasm","type":"exact"},{"name":"endometrial tumor","type":"exact"},{"name":"endometrial tumour","type":"exact"},{"name":"endometrium neoplasm (disease)","type":"exact"},{"name":"endometrium tumor","type":"exact"},{"name":"endometrium tumour","type":"exact"},{"name":"neoplasm of endometrium","type":"exact"},{"name":"neoplasm of the endometrium","type":"exact"},{"name":"tumor of endometrium","type":"exact"},{"name":"tumor of the endometrium","type":"exact"},{"name":"tumour of endometrium","type":"exact"},{"name":"tumour of the endometrium","type":"exact"}],"termid":"MONDO:0021251","terms_by_termid":{"MONDO:0011962":null},"xrefs":{"Monarch":{"xref_id":"0021251"}}}


id: GO:0033072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of vancomycin, (3S,6R,7R,11R,23S,26S,30aS,36R,38aR)-44-[2-O-(3-amino-2,3,6-trideoxy-3-C-methyl-alpha-L-lyxo-hexopyranosyl)-beta-D-glucopyranosyloxy]-3-(carbamoylmethyl)-10,19-dichloro-2,3,4,5,6,7,23,25,26,36,37,38,38a-tetradecahydro-7,22,28,30,32-pentahydroxy-6-(N-methyl-D-leucyl)-2,5,24,38,39-pentaoxo-1H,22H-23,36-(epiminomethano)-8,11:18,21-dietheno-13,16:31,35-di(metheno)[1,6,9]oxadiazacyclohexadecino[4,5-m][10,2,16]benzoxadiazacyclotetracosine-26-carboxylic acid, a complex glycopeptide from Streptomyces orientalis that inhibits a specific step in the synthesis of the peptidoglycan layer in Gram-positive bacteria.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"peptide antibiotic biosynthetic process","termid":"GO:0030651"},{"relation_name":"is_a","term_name":"vancomycin metabolic process","termid":"GO:0033071"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vancomycin biosynthetic process","synonyms":[{"name":"vancomycin anabolism","type":"exact"},{"name":"vancomycin biosynthesis","type":"exact"},{"name":"vancomycin formation","type":"exact"},{"name":"vancomycin synthesis","type":"exact"}],"termid":"GO:0033072"}


id: MONDO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transitional cell carcinoma (obsolete MONDO:0002384)","termid":"MONDO:0002384","xrefs":{"Monarch":{"xref_id":"0002384"}}}


id: PBO:0076391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACR3 antisense RNA 1","termid":"PBO:0076391"}


id: GO:1900943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900940"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900941"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene anabolism","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthesis","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene formation","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene synthesis","type":"narrow"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900943"}


id: PBO:0088732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Lsb5","termid":"PBO:0088732"}


id: MONDO:0016948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 11","termid":"MONDO:0016932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 11","secondary_identifiers":["UMLS:C5679716","Orphanet:262785","GARD:20868","MEDGEN:1825972"],"synonyms":[{"name":"partial duplication of chromosome 11p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 11","type":"exact"},{"name":"partial trisomy of chromosome 11p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 11","type":"exact"}],"termid":"MONDO:0016948","xrefs":{"Monarch":{"xref_id":"0016948"}}}


id: PBO:0076353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 17","termid":"PBO:0076353"}


id: PBO:0004876
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.70","termid":"PBO:0004876"}


id: PBO:0065638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 13","termid":"PBO:0065638"}


id: MONDO:0030985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 19","secondary_identifiers":["UMLS:C5543229","DOID:0112278","MEDGEN:1779702","OMIM:619245"],"synonyms":[{"name":"POF19","type":"exact"},{"name":"premature ovarian failure 19","type":"exact"}],"termid":"MONDO:0030985","xrefs":{"Monarch":{"xref_id":"0030985"}}}


id: GO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in cell wall organization or biogenesis (obsolete GO:0000197)","synonyms":[{"name":"activation of MAP kinase kinase kinase activity during cell wall biogenesis","type":"exact"},{"name":"activation of MAPKKK activity involved in cell wall biogenesis","type":"related"},{"name":"activation of MAPKKK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAP kinase kinase kinase activity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPKKK activity","type":"exact"}],"termid":"GO:0000197"}


id: PBO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-34 (pseudogene)","termid":"PBO:0051366"}


id: PBO:0003279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase (predicted)","termid":"PBO:0003279"}


id: GO:0106174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a phagolysosome.","definition_xrefs":["GOC:pde","PMID:29471269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"is_a","term_name":"phagocytic vesicle lumen","termid":"GO:0097013"},{"relation_name":"part_of","term_name":"phagolysosome","termid":"GO:0032010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773","GO:0031410"],"is_obsolete":false,"name":"phagolysosome vesicle lumen","termid":"GO:0106174"}


id: PBO:0069475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 742, pseudogene","termid":"PBO:0069475"}


id: GO:0005562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA (obsolete GO:0005562)","synonyms":[{"name":"RNA","type":"exact"}],"termid":"GO:0005562"}


id: FYECO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which torin1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ torin1","synonyms":[{"name":"Torin1","type":"exact"}],"termid":"FYECO:0000390"}


id: MONDO:0036193
data:
  {"annotated_genes":["SJAG_02397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86327],"is_not":false,"summary":null,"term":"MONDO:0036193"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02397":null},"genotype_count":0,"is_obsolete":false,"name":"parkinsonism with polyneuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619279","UMLS:C5543299","Orphanet:611237","MEDGEN:1783451","GARD:18028"],"termid":"MONDO:0036193","terms_by_termid":{"MONDO:0036193":null},"xrefs":{"Monarch":{"xref_id":"0036193"}}}


id: PBO:0083338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W","termid":"PBO:0083338"}


id: PBO:0057906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3609","termid":"PBO:0057906"}


id: SO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 16S_rRNA, which functions as the small subunit of the ribosome in prokaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA_gene","termid":"SO:0002362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_16S_gene","synonyms":[{"name":"16S rRNA gene","type":"exact"},{"name":"16S_rRNA_gene","type":"exact"}],"termid":"SO:0002237"}


id: GO:0019126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-serine.","definition_xrefs":["RESID:AA0195"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine racemization (obsolete GO:0019126)","termid":"GO:0019126"}


id: PBO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor TFIIS","termid":"PBO:0001345"}


id: PBO:0040854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S6 pseudogene 1","termid":"PBO:0040854"}


id: GO:0031987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion involved in locomotory behavior","synonyms":[{"name":"locomotion during locomotory behaviour","type":"exact"}],"termid":"GO:0031987"}


id: GO:0004452
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74430],"is_not":false,"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isopentenyl diphosphate = dimethylallyl diphosphate.","definition_xrefs":["RHEA:23284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isopentenyl-diphosphate delta-isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:5.3.3.2","KEGG_REACTION:R01123","MetaCyc:IPPISOM-RXN","Reactome:R-HSA-191382"],"synonyms":[{"name":"IPP isomerase activity","type":"related"},{"name":"isopentenyl-diphosphate D-isomerase activity","type":"exact"},{"name":"isopentenyl-diphosphate delta3-delta2-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate delta-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate isomerase activity","type":"related"},{"name":"methylbutenylpyrophosphate isomerase activity","type":"related"}],"termid":"GO:0004452","terms_by_termid":{"GO:0004452":null}}


id: PBO:0057943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3667 host gene","termid":"PBO:0057943"}


id: MONDO:0005448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver injury resulting from hepatitis C infection.","definition_xrefs":["EFO:0005129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cirrhosis of liver","termid":"MONDO:0005155"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatitis C induced liver cirrhosis","secondary_identifiers":["UMLS:C4763867","MEDGEN:1674707"],"termid":"MONDO:0005448","xrefs":{"Monarch":{"xref_id":"0005448"}}}


id: PBO:0027594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_UV","termid":"PBO:0027594"}


id: PBO:0043742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 like","termid":"PBO:0043742"}


id: PBO:0064956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 8","termid":"PBO:0064956"}


id: FYPO:0007312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 at the central core of the centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere central core during vegetative growth","termid":"FYPO:0003415"},{"relation_name":"is_a","term_name":"increased histone H4-K5 acetylation during vegetative growth","termid":"FYPO:0005309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H4-K5 acetylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5 acetylation at centromeric central core during vegetative growth","type":"exact"},{"name":"increased histone H4K5 acetylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007312"}


id: MONDO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma characterized by the presence of a cyst which is lined by mature tissue resembling the epidermis and the epidermal appendages. It occurs in the ovary, testis, and extragonadal sites including central nervous system and skin.","definition_xrefs":["NCIT:C9011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic teratoma","termid":"MONDO:0002379"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermoid cyst","secondary_identifiers":["SCTID:441459009","icd11.foundation:1622534741","ICDO:9084/0","DOID:2658","MESH:D003884","MEDGEN:41504","UMLS:C0011649"],"synonyms":[{"name":"benign cystic teratoma","type":"exact"},{"name":"cystic dermoid choristoma","type":"exact"},{"name":"dermoid","type":"exact"},{"name":"dermoid choristoma","type":"exact"},{"name":"dermoid cyst","type":"exact"},{"name":"dermoid cyst, benign","type":"exact"},{"name":"dermoid tumor","type":"exact"},{"name":"dermoid tumour","type":"exact"},{"name":"mature cystic teratoma","type":"exact"},{"name":"subcutaneous cystic teratoma","type":"exact"},{"name":"teratoma, benign","type":"related"},{"name":"teratoma, benign (morphologic abnormality)","type":"related"}],"termid":"MONDO:0002378","xrefs":{"Monarch":{"xref_id":"0002378"}}}


id: PBO:0073563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC binding and spindle associated 1 like","termid":"PBO:0073563"}


id: PBO:0043472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 9","termid":"PBO:0043472"}


id: GO:1905243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21382270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to 3,3',5-triiodo-L-thyronine","termid":"GO:1905242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"cellular response to Liothyronin","type":"exact"},{"name":"cellular response to Liothyronine","type":"exact"},{"name":"cellular response to Liothyroninum","type":"exact"}],"termid":"GO:1905243"}


id: PBO:0083548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YDL063C; YDL062W is not essential","termid":"PBO:0083548"}


id: GO:0102991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: myristoyl-CoA + H2O = H+ + tetradecanoate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete myristoyl-CoA hydrolase activity (obsolete GO:0102991)","termid":"GO:0102991"}


id: PBO:0057740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1470","termid":"PBO:0057740"}


id: PBO:0073889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A5 and MMP9 antisense RNA 1","termid":"PBO:0073889"}


id: GO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta intraepithelial T cell differentiation","termid":"GO:0002299"},{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"CD8-positive, alpha-beta intraepithelial T cell development","type":"related"},{"name":"CD8-positive, alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002300"}


id: FYPO:0000414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which plasma membrane fusion involved in cytogamy is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased cell fusion during mating (obsolete FYPO:0000414)","synonyms":[{"name":"cell fusion: decreased","type":"related"},{"name":"decreased cell fusion during conjugation","type":"exact"},{"name":"decreased plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"reduced cell fusion during mating","type":"exact"}],"termid":"FYPO:0000414"}


id: GO:0018145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-serine residue by the formation of O-(phospho-5'-DNA)-L-serine.","definition_xrefs":["RESID:AA0246"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via peptidyl-serine (obsolete GO:0018145)","synonyms":[{"name":"DNA-protein covalent cross-linking via peptidyl-serine","type":"exact"}],"termid":"GO:0018145"}


id: PBO:0073025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase 1","termid":"PBO:0073025"}


id: PBO:0052719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 11","termid":"PBO:0052719"}


id: MONDO:0030926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 51","secondary_identifiers":["DOID:0112273","UMLS:C5543033","OMIM:619177","MEDGEN:1780365"],"synonyms":[{"name":"SPGF51","type":"exact"},{"name":"spermatogenic failure 51","type":"exact"}],"termid":"MONDO:0030926","xrefs":{"Monarch":{"xref_id":"0030926"}}}


id: MONDO:0004523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the skin with a prominent clear cell component.","definition_xrefs":["NCIT:C4459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"clear cell squamous cell skin carcinoma","secondary_identifiers":["DOID:8288","SCTID:254652000","MEDGEN:91064","UMLS:C0345978"],"synonyms":[{"name":"clear cell squamous cell carcinoma of skin","type":"exact"},{"name":"clear cell squamous cell carcinoma of the skin","type":"exact"},{"name":"clear cell squamous cell skin carcinoma","type":"exact"}],"termid":"MONDO:0004523","xrefs":{"Monarch":{"xref_id":"0004523"}}}


id: PBO:0043485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabinoid receptor interacting protein 1","termid":"PBO:0043485"}


id: MONDO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"tympanitis","termid":"MONDO:0024616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute tympanitis","secondary_identifiers":["MEDGEN:509976","SCTID:297009","UMLS:C0155460","DOID:13790","ICD9:384.00"],"synonyms":[{"name":"acute myringitis","type":"exact"}],"termid":"MONDO:0001802","xrefs":{"Monarch":{"xref_id":"0001802"}}}


id: PBO:0057469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 587","termid":"PBO:0057469"}


id: MONDO:0015014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness","secondary_identifiers":["UMLS:C4310625","GARD:18021","MEDGEN:934592","OMIM:617306","Orphanet:603494"],"synonyms":[{"name":"COMMAD","type":"exact"},{"name":"COMMAD syndrome","type":"exact"},{"name":"coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness","type":"exact"},{"name":"coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness; COMMAD","type":"exact"}],"termid":"MONDO:0015014","xrefs":{"Monarch":{"xref_id":"0015014"}}}


id: PBO:0068070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 375","termid":"PBO:0068070"}


id: MONDO:0020397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parachute tricuspid valve is a rare congenital heart malformation defined as an insertion of the chordal apparatus into a single papillary muscle or a muscle group, making a pathognomonic 'pear' shape sign in the four-chamber echocardiographic view with the atrium forming the larger base of the pear and the leaflets the apex. Isolated parachute tricuspid valve may be asymptomatic or present with symptoms of tricuspid stenosis (diastolic inspiratory murmur, pulsation of jugular veins, hepatomegaly, edema, epigastric discomfort, right atrial enlargement, right ventricular hypertrophy, electrocardiography abnormalities). It may also be associated with other heart malformations and present with symptoms of the complex of malformations.","definition_xrefs":["Orphanet:99056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"parachute tricuspid valve","secondary_identifiers":["GARD:19624","UMLS:C0344755","MEDGEN:576478"],"termid":"MONDO:0020397","xrefs":{"Monarch":{"xref_id":"0020397"}}}


id: PBO:0050484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA11 antisense RNA","termid":"PBO:0050484"}


id: PBO:0005681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase (predicted)","termid":"PBO:0005681"}


id: MONDO:0021013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of trichothiodystrophy caused by mutation(s) in the MPLKIP gene, encoding M-phase-specific PLK1-interacting protein.","definition_xrefs":["NCIT:C146899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 4, nonphotosensitive","secondary_identifiers":["GARD:5271","Orphanet:75790","DOID:0050528","OMIM:234050","ICD9:783.43","MEDGEN:272036","ICD9:704.8","SCTID:403796005","UMLS:C1313961"],"synonyms":[{"name":"Amish brittle hair brain syndrome","type":"related"},{"name":"BIDS syndrome","type":"related"},{"name":"MPLKIP nonphotosensitive trichothiodystrophy","type":"exact"},{"name":"Pollitt syndrome","type":"exact"},{"name":"TTD4","type":"exact"},{"name":"hair-brain syndrome","type":"related"},{"name":"nonphotosensitive trichothiodystrophy","type":"related"},{"name":"nonphotosensitive trichothiodystrophy caused by mutation in MPLKIP","type":"exact"},{"name":"trichothiodystrophy 4, nonphotosensitive","type":"exact"},{"name":"trichothiodystrophy, nonphotosensitive 1","type":"related"},{"name":"trichothiodystrophy-neurocutaneous syndrome","type":"related"}],"termid":"MONDO:0021013","xrefs":{"Monarch":{"xref_id":"0021013"}}}


id: PBO:0031476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_cortical_patch_internalization","termid":"PBO:0031476"}


id: GO:0042442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of melatonin (N-acetyl-5-methoxytryptamine).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin metabolic process","termid":"GO:0030186"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melatonin catabolic process","secondary_identifiers":["GO:0042449"],"synonyms":[{"name":"melatonin breakdown","type":"exact"},{"name":"melatonin catabolism","type":"exact"},{"name":"melatonin degradation","type":"exact"}],"termid":"GO:0042442"}


id: MONDO:0004780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocardial infarction","termid":"MONDO:0004781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"strictly posterior acute myocardial infarction","secondary_identifiers":["UMLS:C0264706","MEDGEN:538775","DOID:9407","ICD9:410.60"],"termid":"MONDO:0004780","xrefs":{"Monarch":{"xref_id":"0004780"}}}


id: PBO:0068042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 347","termid":"PBO:0068042"}


id: GO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-aminoadipate + acetyl-CoA = N2-acetyl-alpha-aminoadipate + coenzyme A.","definition_xrefs":["PMID:12925802","PMID:10613839","PMID:29053735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-aminoadipate acetyltransferase activity","secondary_identifiers":["GO:0043869","MetaCyc:RXN-5181"],"synonyms":[{"name":"L-2-aminoadipate N-acetyltransferase activity","type":"related"}],"termid":"GO:0043741"}


id: MONDO:0957809
data:
  {"annotated_genes":["SJAG_01759"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85991],"is_not":false,"summary":null,"term":"MONDO:0957809"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital neutropenia","termid":"MONDO:0018542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01759":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neutropenia, severe congenital, 10, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620534","UMLS:C5882756","MEDGEN:1851433"],"termid":"MONDO:0957809","terms_by_termid":{"MONDO:0957809":null},"xrefs":{"Monarch":{"xref_id":"0957809"}}}


id: FYPO:0003421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of nitric oxide measured in a cell is lower than normal during a cellular response to cadmium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular nitric oxide level during vegetative growth","termid":"FYPO:0003127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular nitric oxide level during cellular response to cadmium ion","synonyms":[{"name":"decreased cellular NO level during cellular response to cadmium","type":"exact"},{"name":"decreased cellular nitric oxide level during cellular response to cadmium","type":"exact"},{"name":"decreased cellular nitric oxide level during cellular response to cadmium during mitotic cell cycle","type":"related"},{"name":"decreased cellular nitric oxide level during cellular response to cadmium during vegetative growth","type":"exact"},{"name":"decreased nitric oxide accumulation during cellular response to cadmium","type":"related"},{"name":"reduced cellular nitric oxide level during cellular response to cadmium","type":"exact"}],"termid":"FYPO:0003421"}


id: PBO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repetin","termid":"PBO:0072547"}


id: GO:1904875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000059","PMID:17389648"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA ligase activity (obsolete GO:1904875)","termid":"GO:1904875"}


id: MONDO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulerythema ophryogenesis is characterized by inflammatory keratotic papules occurring on the face, which may be followed by scars, atrophy and alopecia. Prevalence is unknown but the disease, affecting mainly children and young adults, is rare. Erythema with mild hyperkeratosis of the hair follicles resulting in rough papules is observed on the cheeks and lateral aspects of the eyebrows. The disorder occasionally extends to the adjacent scalp, ears and forehead and rarely to the extensor surfaces of the limbs. Symptoms regress with age, although loss of the lateral aspects of the eyebrows can occur. Many cases occur sporadically; autosomal dominant inheritance has also been reported. There is no particular treatment, but patients should avoid sun exposure without UV protection.","definition_xrefs":["Orphanet:3406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis pilaris atrophicans","termid":"MONDO:0018855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ulerythema ophryogenesis","secondary_identifiers":["UMLS:C5700076","MEDGEN:1813086","GARD:5395"],"synonyms":[{"name":"keratosis pilaris affecting the follicles of the eyebrow hairs","type":"related"},{"name":"type of genodermatosis","type":"related"}],"termid":"MONDO:0018086","xrefs":{"Monarch":{"xref_id":"0018086"}}}


id: SO:0002268
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Endogenous retrovirus (ERV) retrotransposons are abundant in the genomes of jawed vertebrates. Human ERVs (HERVs) are classified based on their homologies to animal retroviruses. Class I families are similar in sequence to mammalian Gammaretroviruses (type C) and Epsilonretroviruses (Type E). Class II families show homology to mammalian Betaretroviruses (Type B) and Deltaretroviruses (Type D). F-Class III families are similar to foamy viruses.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endogenous_Retrovirus_LTR_retrotransposon","synonyms":[{"name":"Endogenous Retrovirus LTR retrotransposon","type":"exact"},{"name":"HERV","type":"exact"},{"name":"RLE retrotransposon","type":"exact"}],"termid":"SO:0002268"}


id: MONDO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of bone that initially results in the excessive resorption of bone (by osteoclasts) followed by the replacement of normal bone marrow with vascular and fibrous tissue.","definition_xrefs":["NCIT:C3292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone Paget disease","secondary_identifiers":["SCTID:2089002","UMLS:C0029401","EFO:0004261","DOID:5408","MEDGEN:10493","OMIMPS:167250","Orphanet:280110"],"synonyms":[{"name":"Paget disease of bone","type":"exact"},{"name":"Paget's bone disease","type":"exact"},{"name":"Paget's disease","type":"related"},{"name":"Paget's disease of bone","type":"exact"},{"name":"Paget's disease of the bone","type":"exact"},{"name":"Pagets disease (bone)","type":"exact"},{"name":"bone Paget disease","type":"exact"},{"name":"bone Paget's disease","type":"exact"},{"name":"familial Paget's disease of bone","type":"related"},{"name":"osseous Paget's disease","type":"exact"},{"name":"osteitis deformans","type":"exact"}],"termid":"MONDO:0005382","xrefs":{"Monarch":{"xref_id":"0005382"}}}


id: PBO:0059680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 46","termid":"PBO:0059680"}


id: PBO:0046513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERICH6 antisense RNA 1","termid":"PBO:0046513"}


id: PBO:0043147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 15","termid":"PBO:0043147"}


id: PBO:0088620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide pyrophosphatase Npp1","termid":"PBO:0088620"}


id: PBO:0076597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 19","termid":"PBO:0076597"}


id: PBO:0078915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 4-1","termid":"PBO:0078915"}


id: PBO:0084828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for outer membrane protein import; cooperates with Tom70p to import the subset of proteins with multiple alpha-helical transmembrane segments, including Ugo1p, Tom20p, and others; forms a complex with Mim2p in the outer membrane that functions as cation-selective channel for translocation of positively charged precursor segments; also has a role in assembly of Tom20p into the TOM complex","termid":"PBO:0084828"}


id: PBO:0090840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12-like","termid":"PBO:0090840"}


id: PBO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methytransferase (predicted)","termid":"PBO:0005145"}


id: GO:0045297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The specific behavior of an organism following mating.","definition_xrefs":["GOC:pr","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete post-mating behavior (obsolete GO:0045297)","synonyms":[{"name":"post-mating behaviour","type":"exact"}],"termid":"GO:0045297"}


id: GO:0050199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E,E)-piperoyl-CoA + piperidine = N-[(E,E)-piperoyl]piperidine + CoA + H+.","definition_xrefs":["RHEA:14561","EC:2.3.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"piperidine N-piperoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03994","MetaCyc:PIPERIDINE-N-PIPEROYLTRANSFERASE-RXN"],"synonyms":[{"name":"(E,E)-piperoyl-CoA:piperidine N-piperoyltransferase activity","type":"related"},{"name":"piperidine piperoyltransferase activity","type":"related"},{"name":"piperoyl-CoA:piperidine N-piperoyltransferase activity","type":"related"}],"termid":"GO:0050199"}


id: PBO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pap1/Caf3","termid":"PBO:0001410"}


id: GO:0099138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric sorocarp in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric sorocarp development","termid":"GO:0099134"},{"relation_name":"is_a","term_name":"altruistic, chimeric, non-reproductive fruiting body development","termid":"GO:0099137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric sorocarp development","synonyms":[{"name":"fully co-operative, chimeric sorocarp development","type":"exact"}],"termid":"GO:0099138"}


id: PBO:0062020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 1 pseudogene","termid":"PBO:0062020"}


id: GO:0005319
data:
  {"annotated_genes":["SJAG_02132","SJAG_01590","SJAG_00669","SJAG_00018","SJAG_03774","SJAG_04370","SJAG_00355","SJAG_03416","SJAG_02957","SJAG_01731","SJAG_01722","SJAG_03100","SJAG_03710","SJAG_16459","SJAG_04984","SJAG_00230","SJAG_03050","SJAG_00587","SJAG_01470","SJAG_00589","SJAG_03338","SJAG_01229","SJAG_02114","SJAG_03851","SJAG_03172","SJAG_02943","SJAG_02581","SJAG_02323","SJAG_01329","SJAG_03721","SJAG_02375","SJAG_03746","SJAG_06440","SJAG_03076","SJAG_03718","SJAG_01945","SJAG_02897","SJAG_00576","SJAG_02516","SJAG_01305","SJAG_01095","SJAG_05209","SJAG_03741","SJAG_01225"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90294,90293,102127,90290,90291,90289,90292,90295,90296,104881,90288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140326"},{"annotations":[112355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034202"},{"annotations":[94186,97707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[100030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"},{"annotations":[108459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120013"},{"annotations":[99265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[69860,102006,101074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[97709,94188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[97710,94189,99983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[97329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[97711,94190,99267,112296,99984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[74209,76304,76078,73125,69709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"},{"annotations":[99268,112298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[94191,97712,99269,101203,112299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[103381,72860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"},{"annotations":[106543,107326,107452,103836,90662,105652,88978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120014"},{"annotations":[109169,102404,76889,111129,116033,108010,94010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120015"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of lipids into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03076":null,"SJAG_03100":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03774":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04984":null,"SJAG_05209":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lipid transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5683672","Reactome:R-HSA-5688397","Reactome:R-HSA-1369052","Reactome:R-HSA-1369028","Reactome:R-HSA-5683714","Reactome:R-HSA-6801250","Reactome:R-HSA-5682285","Reactome:R-HSA-8848053","Reactome:R-HSA-8866329","Reactome:R-HSA-174786","Reactome:R-HSA-5682311"],"synonyms":[{"name":"apolipoprotein","type":"related"},{"name":"lipophorin","type":"narrow"}],"termid":"GO:0005319","terms_by_termid":{"GO:0008526":null,"GO:0017128":null,"GO:0034202":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0120013":null,"GO:0120014":null,"GO:0120015":null,"GO:0120019":null,"GO:0140326":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0170045":null,"GO:0180013":null,"GO:1990050":null}}


id: MONDO:0000904
data:
  {"annotated_genes":["SJAG_04003","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013541"},{"annotations":[85669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014171"},{"annotations":[86379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014337"},{"annotations":[86387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014341"},{"annotations":[85238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:614039","DOID:0090131"],"synonyms":[{"name":"CDCBM","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations","type":"exact"}],"termid":"MONDO:0000904","terms_by_termid":{"MONDO:0012399":null,"MONDO:0013541":null,"MONDO:0014171":null,"MONDO:0014337":null,"MONDO:0014341":null},"xrefs":{"Monarch":{"xref_id":"0000904"}}}


id: PR:O94362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC428.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein C428.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.15","synonyms":[{"name":"Spom972h-SPBC428.15","type":"exact"}],"termid":"PR:O94362"}


id: MONDO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric cancer (obsolete MONDO:0000126)","termid":"MONDO:0000126","xrefs":{"Monarch":{"xref_id":"0000126"}}}


id: GO:1905745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA cis splicing, via spliceosome.","definition_xrefs":["GOC:TermGenie","PMID:2880558","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA splicing, via spliceosome","termid":"GO:0048025"},{"relation_name":"is_a","term_name":"regulation of mRNA cis splicing, via spliceosome","termid":"GO:1905744"},{"relation_name":"negatively_regulates","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA cis splicing, via spliceosome","termid":"GO:1905745"}


id: GO:0004675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["RHEA:18673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0140096","GO:0004672","GO:0038023","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"transmembrane receptor protein serine/threonine kinase activity","secondary_identifiers":["EC:2.7.11.30","MetaCyc:2.7.11.30-RXN","Reactome:R-HSA-170868","Reactome:R-HSA-201476","Reactome:R-HSA-198732"],"synonyms":[{"name":"receptor protein serine/threonine kinase activity","type":"related"},{"name":"receptor serine/threonine protein kinase activity","type":"related"}],"termid":"GO:0004675"}


id: PBO:0091542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter Pho842","termid":"PBO:0091542"}


id: PBO:0057104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 196a-1","termid":"PBO:0057104"}


id: MONDO:0009346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"histidinemia","termid":"MONDO:0009345"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"histidinuria due to a renal tubular defect","secondary_identifiers":["MESH:C538321","UMLS:C0268642","MEDGEN:82825","Orphanet:2158","GARD:2708","OMIM:235830"],"synonyms":[{"name":"histidinuria due to a renal tubular defect","type":"exact"},{"name":"histidinuria-renal tubular defect syndrome","type":"exact"}],"termid":"MONDO:0009346","xrefs":{"Monarch":{"xref_id":"0009346"}}}


id: PBO:0086685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by SAGE","termid":"PBO:0086685"}


id: SO:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A coding exon that is not the most 3-prime or the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interior_coding_exon","synonyms":[{"name":"interior coding exon","type":"exact"}],"termid":"SO:0000004"}


id: MONDO:0013787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychomotor retardation, epilepsy, and craniofacial dysmorphism","secondary_identifiers":["UMLS:C3281055","OMIM:614501","MEDGEN:482685"],"synonyms":[{"name":"PMRED","type":"related"},{"name":"neurodevelopmental disorder with hypotonia, craniofacial abnormalities, and seizures","type":"exact"},{"name":"psychomotor retardation, epilepsy, and craniofacial dysmorphism","type":"exact"}],"termid":"MONDO:0013787","xrefs":{"Monarch":{"xref_id":"0013787"}}}


id: GO:0019370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"icosanoid biosynthetic process","termid":"GO:0046456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene biosynthetic process","secondary_identifiers":["Wikipedia:Leukotriene#Leukotriene_synthesis"],"synonyms":[{"name":"leukotriene anabolism","type":"exact"},{"name":"leukotriene biosynthesis","type":"exact"},{"name":"leukotriene formation","type":"exact"},{"name":"leukotriene synthesis","type":"exact"}],"termid":"GO:0019370"}


id: FYPO:0002823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body does not occur during interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle pole body","termid":"FYPO:0000941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle pole body during interphase","synonyms":[{"name":"abolished protein localization to spindle pole body during interphase during mitotic cell cycle","type":"related"},{"name":"protein absent from mitotic spindle pole body during interphase","type":"related"},{"name":"protein localisation to mitotic spindle pole body abolished during interphase","type":"exact"},{"name":"protein localization to mitotic SPB abolished during interphase","type":"exact"},{"name":"protein localization to mitotic spindle pole body abolished during interphase","type":"exact"},{"name":"protein localization to spindle pole body abolished during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0002823"}


id: PBO:0058139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-1","termid":"PBO:0058139"}


id: MONDO:0011255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mandibulofacial dysostosis","termid":"MONDO:0015483"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mandibulofacial dysostosis-macroblepharon-macrostomia syndrome","secondary_identifiers":["MESH:C566520","OMIM:602562","GARD:17547","Orphanet:357158","UMLS:C1865181","MEDGEN:355927"],"synonyms":[{"name":"Verloes-Lesenfants syndrome","type":"related"},{"name":"macroblepharon, ectropion, hypertelorism, and macrostomia","type":"related"},{"name":"macroblepharon-ectropion-hypertelorism-macrostomia syndrome","type":"exact"},{"name":"mandibulofacial dysostosis with macroblepharon and macrostomia","type":"related"}],"termid":"MONDO:0011255","xrefs":{"Monarch":{"xref_id":"0011255"}}}


id: PBO:0116665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 5A","termid":"PBO:0116665"}


id: MONDO:0859273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver disease, severe congenital","secondary_identifiers":["MEDGEN:1823968","UMLS:C5774195","OMIM:619991"],"termid":"MONDO:0859273","xrefs":{"Monarch":{"xref_id":"0859273"}}}


id: PBO:0083292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps 5' end of the essential gene SPT6","termid":"PBO:0083292"}


id: MONDO:0004604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of classical Hodgkin lymphoma with scattered Hodgkin and Reed-Sternberg cells and a nodular or less often diffuse cellular background consisting of small lymphocytes and with an absence of neutrophils and eosinophils. (WHO, 2008)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic Hodgkin lymphoma","termid":"MONDO:0009348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Hodgkin's lymphoma, lymphocytic-histiocytic predominance","secondary_identifiers":["GARD:19593","ICDO:9651/3","SCTID:118607005","MedDRA:10020231","ICD9:201.4","MEDGEN:224769","DOID:8543","NCIT:C6913","Orphanet:98845","UMLS:C1266194","icd11.foundation:352299041","ONCOTREE:LRCHL"],"synonyms":[{"name":"Hodgkin lymphoma, lymphocyte-rich","type":"exact"},{"name":"Hodgkin lymphoma, lymphocytic-histiocytic predominance","type":"exact"},{"name":"Hodgkin's disease, lymphocyte predominance","type":"exact"},{"name":"Hodgkin's disease, lymphocyte predominance [obs]","type":"exact"},{"name":"LRCHL","type":"exact"},{"name":"classic Hodgkin lymphoma, lymphocyte-rich type","type":"exact"},{"name":"lymphocyte rich Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte rich Hodgkin's disease","type":"exact"},{"name":"lymphocyte rich Hodgkin's lymphoma","type":"exact"},{"name":"lymphocyte rich classical Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte rich classical Hodgkin's disease","type":"exact"},{"name":"lymphocyte rich classical Hodgkin's lymphoma","type":"exact"},{"name":"lymphocyte-rich Classic Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte-rich classical Hodgkin lymphoma","type":"exact"},{"name":"lymphocyte-rich classical Hodgkin's lymphoma","type":"exact"}],"termid":"MONDO:0004604","xrefs":{"Monarch":{"xref_id":"0004604"}}}


id: FYPO:0002574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to centromere","termid":"FYPO:0007853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to centromere during vegetative growth","synonyms":[{"name":"normal protein localisation to centromere during vegetative growth","type":"exact"},{"name":"normal protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"normal protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"normal protein localization to chromosome, centromeric region during vegetative growth","type":"exact"}],"termid":"FYPO:0002574"}


id: PBO:0091414
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human XPO1","termid":"PBO:0091414"}


id: PBO:0046633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 14","termid":"PBO:0046633"}


id: GO:0044179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another.","definition_xrefs":["PMID:21590705","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytolysis in another organism","termid":"GO:0051715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemolysis in another organism","secondary_identifiers":["GO:1990142"],"synonyms":[{"name":"envenomation resulting in hemolysis in another organism","type":"narrow"},{"name":"envenomation resulting in hemolysis in other organism","type":"narrow"},{"name":"hemolysis in other organism","type":"exact"},{"name":"hemolysis of RBCs in other organism","type":"exact"},{"name":"hemolysis of cells in other organism","type":"exact"},{"name":"hemolysis of erythrocytes in other organism","type":"exact"},{"name":"hemolysis of red blood cells in other organism","type":"exact"}],"termid":"GO:0044179"}


id: GO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.","definition_xrefs":["EC:3.5.4.23","MetaCyc:BLASTICIDIN-S-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"blasticidin-S deaminase activity","secondary_identifiers":["RHEA:10148"],"synonyms":[{"name":"blasticidin-S aminohydrolase activity","type":"related"}],"termid":"GO:0047711"}


id: GO:0000296
data:
  {"annotated_genes":["SJAG_02344","SJAG_02059","SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68512,117160,110729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The directed movement of spermine, N,N-bis(3-aminopropyl)-1,4-diaminobutane, a polyamine formed by the transfer of a propylamine group from decarboxylated S-adenosylmethionine to spermidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"spermine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0000296","terms_by_termid":{"GO:1903710":null}}


id: GO:1903289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:TermGenie","GOC:BHF","PMID:10636900"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ATP catabolic process (obsolete GO:1903289)","synonyms":[{"name":"regulation of ATP breakdown","type":"exact"},{"name":"regulation of ATP catabolism","type":"exact"},{"name":"regulation of ATP degradation","type":"exact"},{"name":"regulation of ATP hydrolysis","type":"narrow"}],"termid":"GO:1903289"}


id: MONDO:0003527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare genetic neoplastic disorder with an autosomal dominant pattern of inheritance characterized by multiple, recurrent skin cancers that spontaneously resolve. It has been described almost exclusively in families of Scottish origin. It is caused by a mutation in the tumor-suppressing gene, TGFBR1, on chromosome 9. Clinical presentation is usually rapidly growing squamous cell carcinomas or keratoacanthomas that primarily localize to sun-exposed areas. Appearance of the neoplasms occurs over several weeks before receding over the course of several months if untreated. The regression of the lesions leaves pitting cicatrices but no other known sequelae.","gene_count":0,"genotype_count":0,"name":"obsolete Ferguson-Smith tumor (obsolete MONDO:0003527)","termid":"MONDO:0003527","xrefs":{"Monarch":{"xref_id":"0003527"}}}


id: MONDO:0003707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the common bile duct distal to the insertion of the cystic duct.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"distal biliary tract carcinoma","secondary_identifiers":["NCIT:C7109","MEDGEN:232133","DOID:5923","UMLS:C1333308"],"synonyms":[{"name":"carcinoma of distal biliary tract","type":"exact"},{"name":"carcinoma of the distal biliary tract","type":"exact"},{"name":"distal bile duct cancer","type":"exact"},{"name":"distal bile duct carcinoma","type":"exact"},{"name":"distal biliary tract carcinoma","type":"exact"},{"name":"extrahepatic (distal) bile duct cancer","type":"exact"}],"termid":"MONDO:0003707","xrefs":{"Monarch":{"xref_id":"0003707"}}}


id: PBO:0076053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STN1 subunit of CST complex","termid":"PBO:0076053"}


id: MONDO:0021085
data:
  {"annotated_genes":["SJAG_02261","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86801,86802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm involving the stomach.","definition_xrefs":["NCIT:C3387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02261":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0003897","MESH:D013274","SCTID:126824007","UMLS:C0038356","MEDGEN:20958"],"synonyms":[{"name":"gastric neoplasm","type":"exact"},{"name":"gastric tumor","type":"exact"},{"name":"gastric tumour","type":"exact"},{"name":"neoplasm of stomach","type":"exact"},{"name":"neoplasm of the stomach","type":"exact"},{"name":"stomach neoplasm","type":"exact"},{"name":"stomach neoplasm (disease)","type":"exact"},{"name":"stomach tumor","type":"exact"},{"name":"stomach tumour","type":"exact"},{"name":"tumor of stomach","type":"exact"},{"name":"tumor of the stomach","type":"exact"},{"name":"tumour of stomach","type":"exact"},{"name":"tumour of the stomach","type":"exact"}],"termid":"MONDO:0021085","terms_by_termid":{"MONDO:0001056":null},"xrefs":{"Monarch":{"xref_id":"0021085"}}}


id: PBO:0030184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_population","termid":"PBO:0030184"}


id: GO:1900934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"positively_regulates","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nonadec-1-ene metabolic process","synonyms":[{"name":"activation of nonadec-1-ene metabolic process","type":"narrow"},{"name":"activation of nonadec-1-ene metabolism","type":"exact"},{"name":"positive regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"up regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"up regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"up-regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"up-regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"upregulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"upregulation of nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900934"}


id: FYPO:0001535
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular zinc level","synonyms":[{"name":"normal cellular zinc accumulation","type":"related"},{"name":"normal cellular zinc ion level","type":"exact"},{"name":"normal cellular zinc level during mitotic cell cycle","type":"related"},{"name":"normal cellular zinc level during vegetative growth","type":"exact"}],"termid":"FYPO:0001535"}


id: MONDO:1010982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in golden hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, golden hamster","secondary_identifiers":["OMIA:000487-10036"],"termid":"MONDO:1010982","xrefs":{"Monarch":{"xref_id":"1010982"}}}


id: GO:0045507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-25 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 receptor activity","termid":"GO:0030368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-25 receptor activity","synonyms":[{"name":"IL-25 receptor activity","type":"exact"},{"name":"IL-25R","type":"exact"}],"termid":"GO:0045507"}


id: PBO:0062703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily F member 2","termid":"PBO:0062703"}


id: PBO:0113471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; contains an N-terminal armadillo repeat region necessary for recruitment to the PM and for anchoring Tor2p and Avo1p at the PM; acts along with Avo1p as a scaffold important for integrity of the TORC2 complex; involved in sphingolipid metabolism; contains a RasGEFN domain","termid":"PBO:0113471"}


id: PBO:0003828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase Pub3 (predicted)","termid":"PBO:0003828"}


id: PBO:0080989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 5","termid":"PBO:0080989"}


id: GO:0036410
data:
  {"annotated_genes":["SJAG_02629","SJAG_01385","SJAG_02165","SJAG_04815"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90505,99459,104219,105107],"is_not":false,"summary":null,"term":"GO:0036410"}]},"cv_name":"cellular_component","definition":"A protein complex that can catalyze the acetylation of lysine at position 14 in histone H3, and contains Mst2 as the catalytic subunit. In fission yeast, contains at least Mst2, Nto1, Ptf2, Ptf1 and Eaf6.","definition_xrefs":["GOC:vw","PMID:21289066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3-K14 acetyltransferase complex","termid":"GO:0036409"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01385":null,"SJAG_02165":null,"SJAG_02629":null,"SJAG_04815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"Mst2 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mst2 H3K14 acetyltransferase complex","type":"exact"},{"name":"Mst2 complex","type":"exact"},{"name":"Mst2 histone H3K14 acetyltransferase complex","type":"exact"}],"termid":"GO:0036410","terms_by_termid":{"GO:0036410":null}}


id: FYPO:0003943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thioredoxin peroxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0005447"],"is_obsolete":false,"name":"abnormal thioredoxin peroxidase activity","termid":"FYPO:0003943"}


id: PBO:0058206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4499","termid":"PBO:0058206"}


id: GO:1900453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of long term synaptic depression.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic depression","termid":"GO:1900452"},{"relation_name":"negatively_regulates","term_name":"long-term synaptic depression","termid":"GO:0060292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of long-term synaptic depression","synonyms":[{"name":"down regulation of LTD","type":"related"},{"name":"down regulation of long term depression","type":"broad"},{"name":"down regulation of long term synaptic depression","type":"exact"},{"name":"down-regulation of LTD","type":"related"},{"name":"down-regulation of long term depression","type":"broad"},{"name":"down-regulation of long term synaptic depression","type":"exact"},{"name":"downregulation of LTD","type":"related"},{"name":"downregulation of long term depression","type":"broad"},{"name":"downregulation of long term synaptic depression","type":"exact"},{"name":"inhibition of LTD","type":"related"},{"name":"inhibition of long term depression","type":"broad"},{"name":"inhibition of long term synaptic depression","type":"narrow"},{"name":"negative regulation of LTD","type":"related"},{"name":"negative regulation of long term depression","type":"broad"},{"name":"negative regulation of long term synaptic depression","type":"related"}],"termid":"GO:1900453"}


id: GO:0034073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: squalene = tetrahymanol.","definition_xrefs":["GOC:cb","PMID:18033581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squalene cyclase activity","termid":"GO:0034072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003674","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"tetrahymanol cyclase activity","termid":"GO:0034073"}


id: MONDO:0012758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial prostate cancer in which the cause of the disease is a mutation in the MSMB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 13","secondary_identifiers":["UMLS:C2677821","OMIM:611928","GARD:15534","MESH:C567456","MEDGEN:383198"],"synonyms":[{"name":"HPC13","type":"related"},{"name":"MSMB familial prostate cancer","type":"exact"},{"name":"familial prostate cancer caused by mutation in MSMB","type":"exact"},{"name":"prostate cancer, hereditary, 13","type":"exact"},{"name":"prostate cancer, hereditary, type 13","type":"exact"}],"termid":"MONDO:0012758","xrefs":{"Monarch":{"xref_id":"0012758"}}}


id: MONDO:0004616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painful blister of the periungual skin that is caused by herpes simplex virus type 1 or 2.","definition_xrefs":["NCIT:C128402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"paronychia","termid":"MONDO:0005898"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"},{"relation_name":"is_a","term_name":"nail infection","termid":"MONDO:0024487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"herpetic whitlow","secondary_identifiers":["MEDGEN:509122","UMLS:C0153042","SCTID:43891009","DOID:8607","ICD9:054.6"],"synonyms":[{"name":"Simplexvirus caused paronychia (disease)","type":"exact"},{"name":"Simplexvirus paronychia (disease)","type":"exact"},{"name":"herpetic felon","type":"exact"}],"termid":"MONDO:0004616","xrefs":{"Monarch":{"xref_id":"0004616"}}}


id: PBO:0004002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Spb4 (predicted)","termid":"PBO:0004002"}


id: PBO:0083673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum zinc transporter; part of a heterodimeric transporter with Zrg17p that transfers zinc from the cytosol to the ER lumen; member of the cation diffusion facilitator family of efflux pumps; localizes to ER and nucleus; mutations affect the cellular distribution of zinc and also confer defects in meiotic recombination between homologous chromatids","termid":"PBO:0083673"}


id: PBO:0068179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 486","termid":"PBO:0068179"}


id: PBO:0077510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 229B","termid":"PBO:0077510"}


id: GO:0021601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the abducens nerve to attain its fully functional state. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"abducens nerve development","termid":"GO:0021560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve maturation","synonyms":[{"name":"CN VI maturation","type":"related"}],"termid":"GO:0021601"}


id: GO:0015963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate biosynthetic process","termid":"GO:0015960"},{"relation_name":"is_a","term_name":"diadenosine triphosphate metabolic process","termid":"GO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diadenosine triphosphate biosynthetic process","synonyms":[{"name":"diadenosine triphosphate anabolism","type":"exact"},{"name":"diadenosine triphosphate biosynthesis","type":"exact"},{"name":"diadenosine triphosphate formation","type":"exact"},{"name":"diadenosine triphosphate synthesis","type":"exact"}],"termid":"GO:0015963"}


id: MONDO:0037252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian or testicular stromal tumor characterized by the presence of lipid-rich neoplastic spindle cells. In females, uterine bleeding is the most common symptom. A minority of post-menopausal women with thecoma have an associated endometrial adenocarcinoma or rarely a malignant mixed mullerian tumor or endometrial stromal sarcoma. Rare cases with nuclear atypia and mitotic activity may metastasize. In males, thecomas are rare and they usually present as slow growing, sometimes painful masses. Metastases have not been reported.","definition_xrefs":["NCIT:C3405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thecoma","secondary_identifiers":["MESH:D013798","UMLS:C0039747","ICDO:8600/0","MEDGEN:21505"],"synonyms":[{"name":"thecoma","type":"exact"}],"termid":"MONDO:0037252","xrefs":{"Monarch":{"xref_id":"0037252"}}}


id: MONDO:0022357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital acardia","secondary_identifiers":["UMLS:C0344580","ICD9:759.89","MEDGEN:91032","GARD:9823","SCTID:205834002"],"synonyms":[{"name":"acardia","type":"exact"},{"name":"congenital absence of the heart","type":"related"}],"termid":"MONDO:0022357","xrefs":{"Monarch":{"xref_id":"0022357"}}}


id: GO:0002581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002581"}


id: GO:0042421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine metabolic process","termid":"GO:0042415"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine biosynthetic process","synonyms":[{"name":"levarterenol biosynthesis","type":"exact"},{"name":"levarterenol biosynthetic process","type":"exact"},{"name":"noradrenaline biosynthesis","type":"exact"},{"name":"noradrenaline biosynthetic process","type":"exact"},{"name":"norepinephrine anabolism","type":"exact"},{"name":"norepinephrine biosynthesis","type":"exact"},{"name":"norepinephrine formation","type":"exact"},{"name":"norepinephrine synthesis","type":"exact"}],"termid":"GO:0042421"}


id: SO:1001281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Four base pair sequence immediately downstream of the redefined region. The redefined region is a frameshift site. The quadruplet is 2 overlapping codons.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_three_prime_quadruplet_recoding_signal","synonyms":[{"name":"flanking three prime quadruplet recoding signal","type":"exact"}],"termid":"SO:1001281"}


id: GO:0070150
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72568],"is_not":false,"summary":null,"term":"GO:0070150"}]},"cv_name":"biological_process","definition":"The process of coupling glycine to glycyl-tRNA in a mitochondrion, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycyl-tRNA aminoacylation","termid":"GO:0006426"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0008150","GO:0140053","GO:0006399"],"is_obsolete":false,"name":"mitochondrial glycyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070150","terms_by_termid":{"GO:0070150":null}}


id: GO:0102054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-maleylpyruvate(2-) + H2O = H+ + maleate(2-) + pyruvate.","definition_xrefs":["PMID:7400101","GOC:pz","RHEA:47956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"maleylpyruvate hydrolase activity","secondary_identifiers":["EC:3.7.1.23","MetaCyc:RXN-10447"],"termid":"GO:0102054"}


id: MONDO:0850087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypomagnesemia-generalized seizures-intellectual disability-obesity syndrome","secondary_identifiers":["MEDGEN:1842330","GARD:22484","UMLS:C5681826","Orphanet:620363"],"termid":"MONDO:0850087","xrefs":{"Monarch":{"xref_id":"0850087"}}}


id: PBO:0072995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCML2 pseudogene 2","termid":"PBO:0072995"}


id: PBO:0030714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glucosyltransferase_activity","termid":"PBO:0030714"}


id: FYPO:0005960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a mitotic spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PMID:15797925","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"multipolar spindle","termid":"FYPO:0005959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0000120","FYPO:0001985","FYPO:0005447","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"multipolar mitotic spindle","synonyms":[{"name":"multipolar spindle during mitosis","type":"exact"},{"name":"multipolar spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0005960"}


id: MONDO:0024459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"Aeromonas hydrophila infectious disease","termid":"MONDO:0005117"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Aeromonas hydrophila intestinal disease","secondary_identifiers":["MEDGEN:755174","ICD9:008.47","SCTID:446988001","UMLS:C2960005"],"synonyms":[{"name":"intestinal infection caused by Aeromonas hydrophila","type":"exact"},{"name":"intestinal infection due to Aeromonas hydrophila","type":"exact"}],"termid":"MONDO:0024459","xrefs":{"Monarch":{"xref_id":"0024459"}}}


id: PBO:0047909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(9)(p21)","termid":"PBO:0047909"}


id: GO:1990448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an exon-exon junction complex, a protein complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:24967911","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"exon-exon junction complex binding","synonyms":[{"name":"EJC binding","type":"exact"}],"termid":"GO:1990448"}


id: GO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal hypha.","definition_xrefs":["PMID:15976451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"hyphal tip","termid":"GO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"hyphal tip polarisome","termid":"GO:0031562"}


id: GO:0008240
data:
  {"annotated_genes":["SJAG_04928"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73739],"is_not":false,"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of an N-terminal tripeptide from a polypeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type exopeptidase activity","termid":"GO:0070008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"tripeptidyl-peptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.4.14.10","MetaCyc:3.4.14.10-RXN"],"termid":"GO:0008240","terms_by_termid":{"GO:0008240":null}}


id: PBO:0086217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases; involved in tRNA delivery, stimulating catalysis, and ensuring localization; also binds quadruplex nucleic acids; protein abundance increases in response to DNA replication stress; methionyl-tRNA synthetase is Mes1p; glutamyl-tRNA synthetase is Gus1p","termid":"PBO:0086217"}


id: PBO:0024809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_influences","termid":"PBO:0024809"}


id: PBO:0055562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2998","termid":"PBO:0055562"}


id: MOD:00080
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N5-methyl-L-glutamine.","definition_xrefs":["RESID:AA0071","DeltaMass:166","PubMed:11118225","PubMed:11875433","PubMed:365579","ChEBI:17592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"monomethylated L-glutamine","termid":"MOD:00722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N5-methyl-L-glutamine","synonyms":[{"name":"(2S)-2-amino-5-methylamino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-N5-methylpentanediamic acid","type":"exact"},{"name":"MOD_RES N5-methylglutamine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(delta)-methylglutamine","type":"exact"},{"name":"N-methylglutamine","type":"exact"},{"name":"N5-methyl-L-glutamine","type":"exact"},{"name":"N5-methylated L-glutamine","type":"exact"},{"name":"N5Me1Gln","type":"exact"},{"name":"gamma-methylglutamine","type":"exact"}],"termid":"MOD:00080"}


id: PR:000050528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the hhf3 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.12","termid":"PR:000050528"}


id: GO:0042309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homoeostatic process in which an organism maintains its internal body temperature at a relatively constant value. This is achieved by using metabolic processes to counteract fluctuations in the temperature of the environment.","definition_xrefs":["ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homoiothermy","synonyms":[{"name":"antifreeze activity","type":"related"},{"name":"ice nucleation activity","type":"related"},{"name":"ice nucleation inhibitor activity","type":"related"}],"termid":"GO:0042309"}


id: MONDO:0060568
data:
  {"annotated_genes":["SJAG_04038","SJAG_01653"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85027,85028],"is_not":false,"summary":null,"term":"MONDO:0060568"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Pilarowski-Bjornsson syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1619150","GARD:17970","OMIM:617682","Orphanet:529965","UMLS:C4540131"],"synonyms":[{"name":"PILBOS","type":"related"},{"name":"Pilarowski-Bjornsson syndrome","type":"exact"},{"name":"developmental delay and speech apraxia with or without seizures","type":"related"}],"termid":"MONDO:0060568","terms_by_termid":{"MONDO:0060568":null},"xrefs":{"Monarch":{"xref_id":"0060568"}}}


id: PBO:0038678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 4","termid":"PBO:0038678"}


id: FYPO:0007097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly takes place in one or more abnormal locations. An actin fusion focus normally forms during mating at the site where the two cells will fuse. Ectopic fusion foci often form near actin cortical patches, and may also have abnormal composition.","definition_xrefs":["PomBase:mah","PMID:31495586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin fusion focus assembly","termid":"FYPO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000301","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"ectopic actin fusion focus assembly","synonyms":[{"name":"ectopic actin fusion focus formation","type":"exact"},{"name":"mislocalized actin fusion focus assembly","type":"exact"}],"termid":"FYPO:0007097"}


id: PBO:0046823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 2","termid":"PBO:0046823"}


id: PBO:0073300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 22","termid":"PBO:0073300"}


id: MONDO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the spine in which the continuity of a vertebral bone is broken. Symptoms include back pain and difficulty bending and twisting.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"},{"relation_name":"is_a","term_name":"spinal injury","termid":"MONDO:0037747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal fracture","secondary_identifiers":["SCTID:50448004","EFO:0003902","MESH:D016103"],"synonyms":[{"name":"bone fracture of vertebral column","type":"exact"},{"name":"vertebral column bone fracture","type":"exact"}],"termid":"MONDO:0005309","xrefs":{"Monarch":{"xref_id":"0005309"}}}


id: GO:0098583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vocalization behavior that is the result of learning.","definition_xrefs":["GOC:rl","PMID:16418265","PMID:17035521","GOC:BHF","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vocalization behavior","termid":"GO:0071625"},{"relation_name":"is_a","term_name":"learned vocalization behavior or vocal learning","termid":"GO:0098598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learned vocalization behavior","termid":"GO:0098583"}


id: PBO:0039152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 7","termid":"PBO:0039152"}


id: MONDO:0021927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arthrogryposis epileptic seizures migrational brain disorder (obsolete MONDO:0021927)","secondary_identifiers":["MESH:C537442"],"synonyms":[{"name":"arthrogryposis multiplex congenita with epileptic seizures and migrational brain disorder","type":"related"}],"termid":"MONDO:0021927","xrefs":{"Monarch":{"xref_id":"0021927"}}}


id: PBO:0062737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 4","termid":"PBO:0062737"}


id: PBO:0056443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 16","termid":"PBO:0056443"}


id: GO:0009626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rapid, localized death of plant cells in response to invasion by a pathogen.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"symbiont-induced defense-related programmed cell death","termid":"GO:0034050"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant-type hypersensitive response","synonyms":[{"name":"HR","type":"broad"},{"name":"HR-PCD","type":"exact"},{"name":"plant hypersensitive response","type":"exact"}],"termid":"GO:0009626"}


id: GO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3, and which contains either of the protein subunits MLL3 or MLL4 in mammals, or equivalent in other species.","definition_xrefs":["GOC:sart","PMID:21875999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"MLL3/4 complex","synonyms":[{"name":"Trr/COMPASS-like complex","type":"exact"}],"termid":"GO:0044666"}


id: MONDO:0017556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Madelung deformity","termid":"MONDO:0018154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Madelung deformity, unilateral","secondary_identifiers":["icd11.foundation:1964514438","Orphanet:295221"],"termid":"MONDO:0017556","xrefs":{"Monarch":{"xref_id":"0017556"}}}


id: PBO:0049356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 14","termid":"PBO:0049356"}


id: PBO:0072404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 9","termid":"PBO:0072404"}


id: PBO:0028439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_papuamide_B_during_mating","termid":"PBO:0028439"}


id: PBO:0052969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-L-3-hydroxyproline dehydratase","termid":"PBO:0052969"}


id: GO:0003418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the growth of a bone. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:0003413"},{"relation_name":"part_of","term_name":"growth plate cartilage development","termid":"GO:0003417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}


id: PBO:0063212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionyl-CoA carboxylase subunit alpha","termid":"PBO:0063212"}


id: PBO:0079007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 1-1","termid":"PBO:0079007"}


id: PR:Q09150
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 61 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03420","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.02","secondary_identifiers":["UniProtKB:Q09150"],"synonyms":[{"name":"Spom972h-WDR61","type":"exact"}],"termid":"PR:Q09150"}


id: PBO:0076337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 5","termid":"PBO:0076337"}


id: PBO:0042002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC54 antisense RNA 1","termid":"PBO:0042002"}


id: GO:0043320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"natural killer cell activation involved in immune response","termid":"GO:0002323"},{"relation_name":"part_of","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"natural killer cell degranulation","synonyms":[{"name":"NK cell degranulation","type":"exact"},{"name":"NK cell granule exocytosis","type":"exact"},{"name":"natural killer cell granule exocytosis","type":"exact"}],"termid":"GO:0043320"}


id: GO:1900933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of nonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900933"}


id: FYPO:0007331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing formaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on formaldehyde","synonyms":[{"name":"normal cell population growth in presence of formaldehyde","type":"exact"},{"name":"normal cell population growth on formaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on formaldehyde","type":"exact"}],"termid":"FYPO:0007331"}


id: GO:0071803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of podosome assembly.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of podosome assembly","termid":"GO:0071801"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of podosome assembly","synonyms":[{"name":"activation of podosome assembly","type":"narrow"},{"name":"stimulation of podosome assembly","type":"narrow"},{"name":"up regulation of podosome assembly","type":"exact"},{"name":"up-regulation of podosome assembly","type":"exact"},{"name":"upregulation of podosome assembly","type":"exact"}],"termid":"GO:0071803"}


id: GO:0030833
data:
  {"annotated_genes":["SJAG_03086","SJAG_04479","SJAG_01993","SJAG_00279","SJAG_02700","SJAG_01894","SJAG_00521","SJAG_04100","SJAG_02566"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66691,67576,76482,77019,79053],"is_not":false,"summary":null,"term":"GO:0030833"},{"annotations":[78904,79807,92083,75373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"regulates","term_name":"actin filament polymerization","termid":"GO:0030041"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0030036","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of actin filament polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin polymerization","type":"exact"}],"termid":"GO:0030833","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: MONDO:0019437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enthesitis-related juvenile idiopathic arthritis is a subtype of juvenile idiopathic arthritis that is characterized by both arthritis and inflammation of an enthesitis site (the point at which a ligament, tendon, or joint capsule attaches to the bone). Signs and symptoms generally develop in late childhood or early adolescence and include pain, tenderness, and swelling in joints and at the enthesis. The knee and the back of the ankle (at the Achilles tendon) are the most commonly affected parts of the body. The underlying cause of enthesitis-related juvenile idiopathic arthritis is currently unknown (idiopathic). It is very rare for more than one member of a family to have juvenile arthritis; however, research suggests that having a family member with juvenile arthritis or any autoimmune disease may increase the risk of having juvenile arthritis, in general. Treatment usually involves different types of medications to help manage symptoms and/or physical therapy.","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enthesitis-related juvenile idiopathic arthritis","secondary_identifiers":["Orphanet:85438","NCIT:C119024","MEDGEN:854059","NANDO:2201060","GARD:10969","EFO:0009732","icd11.foundation:1128255226","UMLS:C3495919","SCTID:410801005"],"synonyms":[{"name":"ERA","type":"exact"},{"name":"enthesitis related arthritis, juvenile","type":"related"},{"name":"enthesitis-related JIA","type":"exact"},{"name":"enthesitis-related arthritis","type":"related"},{"name":"era","type":"exact"},{"name":"juvenile enthesitis-related arthritis","type":"related"},{"name":"juvenile spondylarthropathy","type":"related"}],"termid":"MONDO:0019437","xrefs":{"Monarch":{"xref_id":"0019437"}}}


id: MONDO:0007173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial septal defect (ASD) with atrioventricular conduction defects is an extremely rare genetic congenital heart disease characterized by the presence of ASD, mostly of the ostium secundum type, associated with conduction anomalies like atrioventricular block, atrial fibrillation or right bundle branch block.","definition_xrefs":["Orphanet:1479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 7","secondary_identifiers":["GARD:16566","OMIM:108900","UMLS:C3276096","MEDGEN:477726","DOID:0110112"],"synonyms":[{"name":"ASD with or without atrioventricular conduction defects","type":"exact"},{"name":"ASD7","type":"related"},{"name":"NKX2-5 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in NKX2-5","type":"exact"},{"name":"atrial heart septal defect type 7","type":"exact"},{"name":"atrial septal defect 7 with or without atrioventricular conduction defects","type":"related"},{"name":"atrial septal defect 7, with or without AV conduction defects","type":"exact"},{"name":"atrial septal defect-atrioventricular conduction defects syndrome","type":"exact"}],"termid":"MONDO:0007173","xrefs":{"Monarch":{"xref_id":"0007173"}}}


id: PR:Q9P7L2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubx4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7L2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.11","synonyms":[{"name":"Spom972h-ubx4","type":"exact"}],"termid":"PR:Q9P7L2"}


id: PR:O14388
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2701 gene.","definition_xrefs":["UniProtKB:O14388","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.07c","synonyms":[{"name":"Spom972h-rpl2701","type":"exact"}],"termid":"PR:O14388"}


id: PBO:0067821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 123","termid":"PBO:0067821"}


id: MONDO:0009264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastroschisis is marked by viscera protruding, without a covering sac, from the fetal abdomen on the right lateral base of the umbilicus. It is due to defective embryo growth and other malformations are only exceptionally associated.","definition_xrefs":["Orphanet:2368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal wall malformation","termid":"MONDO:0100298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastroschisis","secondary_identifiers":["ICD9:756.73","MESH:D020139","MedDRA:10018046","EFO:1000949","icd11.foundation:551758329","OMIM:230750","SCTID:72951007","UMLS:C0265706","DOID:11044","ICD10CM:Q79.3","MEDGEN:82721","NCIT:C84725","NORD:1176","GARD:8661"],"synonyms":[{"name":"abdominal wall defects","type":"related"},{"name":"congenital fissure of the abdominal cavity","type":"related"},{"name":"eventration","type":"broad"},{"name":"gastroschisis","type":"exact"},{"name":"laparoschisis","type":"exact"}],"termid":"MONDO:0009264","xrefs":{"Monarch":{"xref_id":"0009264"}}}


id: PBO:0083705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER localized heme oxygenase; involved in heme degradation during iron starvation and in the oxidative stress response; expression is regulated by AFT1 and oxidative stress; relocates to the perinuclear region in the presence of oxidants","termid":"PBO:0083705"}


id: MONDO:1011547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctionalis epidermolysis bullosa that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, cattle","termid":"MONDO:1010751"},{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa , non-human animal","termid":"MONDO:1011426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctionalis epidermolysis bullosa, cattle","secondary_identifiers":["OMIA:000342-9913"],"termid":"MONDO:1011547","xrefs":{"Monarch":{"xref_id":"1011547"}}}


id: PBO:0012822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-local_domain","termid":"PBO:0012822"}


id: PBO:0070906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 14","termid":"PBO:0070906"}


id: PBO:0050727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 13","termid":"PBO:0050727"}


id: GO:0097288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["PMID:364423","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile biosynthetic process","termid":"GO:0080028"},{"relation_name":"is_a","term_name":"7-cyano-7-deazaguanine metabolic process","termid":"GO:0097287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine biosynthetic process","synonyms":[{"name":"7-cyano-7-deazaguanine anabolism","type":"exact"},{"name":"7-cyano-7-deazaguanine biosynthesis","type":"exact"},{"name":"7-cyano-7-deazaguanine formation","type":"exact"},{"name":"7-cyano-7-deazaguanine synthesis","type":"exact"}],"termid":"GO:0097288"}


id: PBO:0053054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC00240 antisense RNA regulating promoter methylation","termid":"PBO:0053054"}


id: MONDO:0043005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of multiple congenital anomalies/dysmorphic syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome (obsolete MONDO:0043005)","secondary_identifiers":["Orphanet:183533"],"synonyms":[{"name":"hereditary multiple congenital anomalies/dysmorphic syndrome","type":"exact"}],"termid":"MONDO:0043005","xrefs":{"Monarch":{"xref_id":"0043005"}}}


id: MONDO:0859311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, demyelinating, type 1J","secondary_identifiers":["UMLS:C5774249","OMIM:620111","MEDGEN:1824022"],"termid":"MONDO:0859311","xrefs":{"Monarch":{"xref_id":"0859311"}}}


id: PBO:0039105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook DNA binding motif containing 1","termid":"PBO:0039105"}


id: MOD:01402
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a (2S,3R,4R)-3,4-dihydroxyproline.","definition_xrefs":["PubMed:6893271","ChEBI:141805","RESID:AA0479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated proline","termid":"MOD:00866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4R)-3,4-dihydroxyproline","synonyms":[{"name":"(2S,3R,4R)-3,4-dihydroxyproline","type":"exact"},{"name":"(2S,3R,4R)-3,4-dihydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2,3-trans-3,4-trans-3,4-dihydroxy-L-proline","type":"exact"},{"name":"2-alpha-3-beta-4-alpha-3,4-dihydroxyproline","type":"exact"},{"name":"MOD_RES (3R,4R)-3,4-dihydroxyproline","type":"exact"}],"termid":"MOD:01402"}


id: GO:0106422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Zeaxanthin + O2 = (3R)-11-cis-3-hydroxyretinal + (3R)-all-trans-3-hydroxyretinal.","definition_xrefs":["PMID:19889630","PMID:19020100","RHEA:33931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid dioxygenase activity","termid":"GO:0010436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carotenoid isomerooxygenase activity","secondary_identifiers":["EC:1.13.11.65"],"termid":"GO:0106422"}


id: PBO:0109461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein, human LYAR homolog, involved in rRNA processing","termid":"PBO:0109461"}


id: PBO:0063695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein geranylgeranyltransferase type I subunit beta pseudogene 2","termid":"PBO:0063695"}


id: PBO:0087449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that associates with actin filaments; forms a complex with Aim21p that inhibits barbed end F-actin assembly; elevates actin monomer pools to increase endocytotic efficiency and to regulate the distribution of actin between cables and patches; Aim21p/Tda2p forms a larger complex with actin capping proteins Cap1p and Cap2p; TcTex1-type dynein light chain family member; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0087449"}


id: MONDO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic developmental and epileptic encephalopathy (DEE) characterized by developmental delay, generalized epilepsy consisting of eyelid myoclonia with absences and myoclonic-atonic seizures, intellectual disability and autism spectrum disorder (ASD).","definition_xrefs":["Orphanet:544254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"SYNGAP1-related developmental and epileptic encephalopathy","secondary_identifiers":["MEDGEN:1810512","UMLS:C5680163","GARD:22232"],"termid":"MONDO:0034099","xrefs":{"Monarch":{"xref_id":"0034099"}}}


id: MONDO:0005270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete motor neuron disease (obsolete MONDO:0005270)","termid":"MONDO:0005270","xrefs":{"Monarch":{"xref_id":"0005270"}}}


id: MONDO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical adenoid basal carcinoma (obsolete MONDO:0003877)","termid":"MONDO:0003877","xrefs":{"Monarch":{"xref_id":"0003877"}}}


id: PBO:0029772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_shape","termid":"PBO:0029772"}


id: PBO:0029934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029934"}


id: MONDO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the penis. Representative examples of non-neoplastic disorders include phimosis, balanitis, and hypospadias. Representative examples of neoplastic disorders include hemangioma, penile intraepithelial neoplasia, and penile carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penile disorder","secondary_identifiers":["NCIT:C26846","SCTID:33958003","DOID:1529","MESH:D010409","ICD9:607.9","UMLS:C0030846","ICD9:607.89","ICD9:607.8","MEDGEN:10627"],"synonyms":[{"name":"disease of penis","type":"exact"},{"name":"disease or disorder of penis","type":"exact"},{"name":"disorder of penis","type":"exact"},{"name":"penile disease","type":"exact"},{"name":"penile disorder","type":"exact"},{"name":"penis disease","type":"exact"},{"name":"penis disease or disorder","type":"exact"}],"termid":"MONDO:0002036","xrefs":{"Monarch":{"xref_id":"0002036"}}}


id: PBO:0051975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO family member 2","termid":"PBO:0051975"}


id: GO:0047784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + cortisol = CoA + cortisol 21-acetate.","definition_xrefs":["RHEA:17073","EC:2.3.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cortisol O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02837","MetaCyc:CORTISOL-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:cortisol O-acetyltransferase activity","type":"related"},{"name":"corticosteroid acetyltransferase activity","type":"related"},{"name":"corticosteroid-21-O-acetyltransferase activity","type":"related"},{"name":"cortisol acetyltransferase activity","type":"related"}],"termid":"GO:0047784"}


id: GO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amine, a weakly basic organic compound that contains an amino or a substituted amino group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amine binding","termid":"GO:0043176"}


id: PBO:0088950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg12 conjugating enzyme Atg10","termid":"PBO:0088950"}


id: PBO:0082845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding metallothionein; required for wild-type copper resistance","termid":"PBO:0082845"}


id: GO:0006157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyadenosine catabolic process","secondary_identifiers":["GO:0006159"],"synonyms":[{"name":"deoxyadenosine breakdown","type":"exact"},{"name":"deoxyadenosine catabolism","type":"exact"},{"name":"deoxyadenosine degradation","type":"exact"},{"name":"deoxyadenosine phosphorolysis","type":"related"}],"termid":"GO:0006157"}


id: MONDO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm of the prostate. It is characterized by the presence of skeletal muscle exhibiting embryonic features.","definition_xrefs":["NCIT:C5525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate rhabdomyosarcoma","termid":"MONDO:0006389"},{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"},{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate embryonal rhabdomyosarcoma","secondary_identifiers":["UMLS:C1335508","DOID:3251","MEDGEN:233873"],"synonyms":[{"name":"embryonal rhabdomyosarcoma (disease) of prostate gland","type":"exact"},{"name":"embryonal rhabdomyosarcoma of prostate","type":"exact"},{"name":"embryonal rhabdomyosarcoma of the prostate","type":"exact"},{"name":"prostate embryonal rhabdomyosarcoma","type":"exact"},{"name":"prostate gland embryonal rhabdomyosarcoma (disease)","type":"exact"}],"termid":"MONDO:0002574","xrefs":{"Monarch":{"xref_id":"0002574"}}}


id: PBO:0060593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCAM1 antisense RNA1","termid":"PBO:0060593"}


id: PBO:0040163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated metabolic related lncRNA 1","termid":"PBO:0040163"}


id: PBO:0041011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bisphosphoglycerate mutase","termid":"PBO:0041011"}


id: PBO:0087772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome complex; complex is involved in production of 18S rRNA and assembly of small ribosomal subunit; Utp30p is peripherally associated with 90S preribosome and appears partially redundant with its paralog Cic1p","termid":"PBO:0087772"}


id: PBO:0089026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase epsilon subunit Ost2","termid":"PBO:0089026"}


id: PBO:0068932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 175, pseudogene","termid":"PBO:0068932"}


id: GO:0032437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense network of actin filaments found beneath the apical cell surface of hair cells, and into which stereocilia are inserted.","definition_xrefs":["PMID:2592408","PMID:8071151","PMID:12485990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737","GO:0015629"],"is_obsolete":false,"name":"cuticular plate","termid":"GO:0032437"}


id: PBO:0077691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNIP2 pseudogene 1","termid":"PBO:0077691"}


id: PBO:0116689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 17B","termid":"PBO:0116689"}


id: MONDO:0008904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"campomelic dysplasia","termid":"MONDO:0007251"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptomelic syndrome, long-limb type","secondary_identifiers":["MESH:C537977","MEDGEN:347129","OMIM:211990","GARD:1071","UMLS:C1859354"],"synonyms":[{"name":"Camptomelic syndrome long limb type","type":"related"},{"name":"campomelic syndrome long limb type","type":"related"},{"name":"campomelic syndrome, long-limb type","type":"related"},{"name":"camptomelic syndrome, long-limb type","type":"exact"}],"termid":"MONDO:0008904","xrefs":{"Monarch":{"xref_id":"0008904"}}}


id: PBO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization_to_old_end","termid":"PBO:0030301"}


id: PBO:0063486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 3","termid":"PBO:0063486"}


id: MONDO:0009016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The deposition of calcium on the cornea, resulting in pain and decreased visual acuity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"},{"relation_name":"is_a","term_name":"keratopathy","termid":"MONDO:0002261"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"band keratopathy","secondary_identifiers":["DOID:11164","icd11.foundation:184627034","MEDGEN:56354","MESH:C562399","NCIT:C118765","OMIM:217500","ICD9:371.43","SCTID:35055000","UMLS:C0155120"],"synonyms":[{"name":"band keratopathy","type":"exact"},{"name":"band-shaped keratopathy","type":"exact"},{"name":"corneal dystrophy, band-SHAPED","type":"related"}],"termid":"MONDO:0009016","xrefs":{"Monarch":{"xref_id":"0009016"}}}


id: GO:0030549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is increased.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"},{"relation_name":"is_a","term_name":"acetylcholine receptor regulator activity","termid":"GO:0030548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"acetylcholine receptor activator activity","termid":"GO:0030549"}


id: PATO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being in disarray; extremely disorderly.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disheveled","termid":"PATO:0001605"}


id: FYPO:0000848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of one or more chromosomes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal chromosome morphology","termid":"FYPO:0005600"},{"relation_name":"output_of","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000707","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000652","FYPO:0000641","FYPO:0001320","FYPO:0000661"],"is_obsolete":false,"name":"abnormal chromosome morphology during vegetative growth","synonyms":[{"name":"abnormal chromosome morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000848"}


id: FYPO:0007177
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119032],"is_not":false,"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119021,119022,119029,119033],"is_not":false,"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abolished during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abolished protein localization to medial cortex during mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to medial cortex during mitotic interphase","type":"exact"},{"name":"abolished protein localization to medial cortex during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished protein localization to medial ring during mitotic interphase","type":"exact"},{"name":"protein localization to medial cortex abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007177","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: MONDO:0009183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa with pyloric atresia is a severe subtype of junctional epidermolysis bullosa (JEB) characterized by generalized blistering at birth and congenital atresia of the pylorus and rarely of other portions of the gastrointestinal tract.","definition_xrefs":["Orphanet:79403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"junctional epidermolysis bullosa with pyloric atresia","secondary_identifiers":["OMIM:226730","NANDO:2201380","GARD:9694","UMLS:C5676875","MEDGEN:1810975","icd11.foundation:1877890811","DOID:0060733","MESH:C535377"],"synonyms":[{"name":"Carmi syndrome","type":"exact"},{"name":"EB-Pa-ACC","type":"related"},{"name":"JEB-PA","type":"exact"},{"name":"JEB-Pa","type":"related"},{"name":"aplasia cutis congenita with gastrointestinal atresia","type":"related"},{"name":"epidermolysis bullosa JUNCTIONALIS with pyloric atresia","type":"related"},{"name":"epidermolysis bullosa junctionalis with pyloric atresia","type":"exact"},{"name":"epidermolysis bullosa with pyloric atresia","type":"related"},{"name":"epidermolysis bullosa, junctional, with pyloric atresia","type":"related"},{"name":"epidermolysis bullosa, junctional, with pyloric atresia and aplasia cutis congenita","type":"related"},{"name":"epidermolysis bullosa, junctional, with pyloric stenosis","type":"exact"},{"name":"junctional epidermolysis bullosa - pyloric atresia","type":"related"},{"name":"junctional epidermolysis bullosa with pyloric atresia","type":"exact"},{"name":"junctional epidermolysis bullosa-pyloric atresia syndrome","type":"exact"}],"termid":"MONDO:0009183","xrefs":{"Monarch":{"xref_id":"0009183"}}}


id: PBO:0077224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 1","termid":"PBO:0077224"}


id: PBO:0003774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CHY type zinc finger protein","termid":"PBO:0003774"}


id: PBO:0049495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 2, pseudogene","termid":"PBO:0049495"}


id: PBO:0056909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC inducible lncRNA inactivating p53","termid":"PBO:0056909"}


id: PBO:0087983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; methylates the N-1 position of guanine at position 9 in tRNAs; protein abundance increases in response to DNA replication stress; member of the SPOUT (SpoU-TrmD) methyltransferase family; human ortholog TRMT10A plays a role in the pathogenesis of microcephaly and early onset diabetes; an 18-mer originates from the TRM10 locus; genetic analysis shows the 18-mer is the translation regulator","termid":"PBO:0087983"}


id: PBO:0077214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 5, pseudogene","termid":"PBO:0077214"}


id: PBO:0079199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 2","termid":"PBO:0079199"}


id: PBO:0091839
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"do not confuse with Sty1","termid":"PBO:0091839"}


id: PR:Q10341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cys2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine-O-acetyltransferase cys2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.17c","synonyms":[{"name":"Spom972h-cys2","type":"exact"}],"termid":"PR:Q10341"}


id: GO:0046102
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"inosine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"inosine metabolism","type":"exact"}],"termid":"GO:0046102","terms_by_termid":{"GO:0006190":null}}


id: PBO:0069933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1226, pseudogene","termid":"PBO:0069933"}


id: PBO:0052804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 71","termid":"PBO:0052804"}


id: PBO:0052334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2012","termid":"PBO:0052334"}


id: PBO:0018284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator Fub2 (predicted)","termid":"PBO:0018284"}


id: PBO:0048720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 3","termid":"PBO:0048720"}


id: PBO:0050423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H1 pseudogene 2","termid":"PBO:0050423"}


id: PBO:0027701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolar_chromatin_organization_resulting_in_peripheral_chromatin_distribution","termid":"PBO:0027701"}


id: MONDO:0014689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome","secondary_identifiers":["DOID:0080592","MEDGEN:894399","OMIM:616549","Orphanet:447974","UMLS:C4225285","GARD:17778"],"synonyms":[{"name":"KFS4","type":"related"},{"name":"Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome","type":"exact"},{"name":"Klippel-Feil syndrome 4, autosomal recessive, with myopathy and facial dysmorphism","type":"related"},{"name":"Klippel-Feil syndrome 4, autosomal recessive, with nemaline myopathy and facial dysmorphism","type":"related"}],"termid":"MONDO:0014689","xrefs":{"Monarch":{"xref_id":"0014689"}}}


id: GO:0102633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: flaviolin-2-olate + NADH + H+ + O2 = mompain + NAD + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete flaviolin monooxygenase activity (obsolete GO:0102633)","termid":"GO:0102633"}


id: PR:Q92339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity gluconate transporter ght3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.01","synonyms":[{"name":"Spom972h-ght3","type":"exact"},{"name":"hexose transporter 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92339"}


id: PBO:0114537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DUF3818 and PXA domain conserved fungal protein, potential lipid transport protein implicated in membrane organization, ergosterol distribution","termid":"PBO:0114537"}


id: PBO:0064180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XG, pseudogene","termid":"PBO:0064180"}


id: PBO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein L-glutamate O-methyltransferase, implicated in DNA damage response","termid":"PBO:0036521"}


id: MONDO:0022321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"2-methylacetoacetyl CoA thiolase deficiency","secondary_identifiers":["GARD:8382","MESH:C535307","UMLS:C2930874","MEDGEN:419652"],"termid":"MONDO:0022321","xrefs":{"Monarch":{"xref_id":"0022321"}}}


id: PBO:0030165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_sporulation","termid":"PBO:0030165"}


id: GO:0140021
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58733],"is_not":false,"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The process in which ADP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:2541251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transport","termid":"GO:0015866"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mitochondrial ADP transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0140021","terms_by_termid":{"GO:0140021":null}}


id: MONDO:0014184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A communication disorder that involves the processing of linguistic information.","direct_ancestors":[{"relation_name":"is_a","term_name":"specific language impairment","termid":"MONDO:0000724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language impairment 5","secondary_identifiers":["UMLS:C3809483","EFO:0005425","MEDGEN:815813","OMIM:615432"],"synonyms":[{"name":"SLI5","type":"exact"},{"name":"specific language impairment 5","type":"exact"},{"name":"specific language impairment type 5","type":"exact"}],"termid":"MONDO:0014184","xrefs":{"Monarch":{"xref_id":"0014184"}}}


id: PBO:0072486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 15","termid":"PBO:0072486"}


id: GO:0070828
data:
  {"annotated_genes":["SJAG_03997","SJAG_03635","SJAG_00335","SJAG_02165","SJAG_02401","SJAG_01601","SJAG_03664","SJAG_03543","SJAG_03118","SJAG_03945","SJAG_01745","SJAG_02701","SJAG_01465","SJAG_01050","SJAG_01610","SJAG_01046","SJAG_04213","SJAG_04755","SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91098,96418,116960],"is_not":false,"summary":null,"term":"GO:0070828"},{"annotations":[90508,116932,93837,98908,117566,115062,112412,102843,98934,87902,103012,95922,98689,112411,112858,112413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033696"}]},"cv_name":"biological_process","definition":"Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin, a compact and highly condensed form of chromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_01046":null,"SJAG_01050":null,"SJAG_01465":null,"SJAG_01601":null,"SJAG_01610":null,"SJAG_01745":null,"SJAG_02165":null,"SJAG_02401":null,"SJAG_02701":null,"SJAG_03118":null,"SJAG_03543":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03945":null,"SJAG_03997":null,"SJAG_04213":null,"SJAG_04755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"heterochromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterochromatin organisation","type":"exact"}],"termid":"GO:0070828","terms_by_termid":{"GO:0033696":null,"GO:0070828":null}}


id: GO:0016259
data:
  {"annotated_genes":["SJAG_03556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112504],"is_not":false,"summary":null,"term":"GO:0016259"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving selenocysteine, an essential component of glutathione peroxidase and some other proteins.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"selenocysteine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2408522"],"synonyms":[{"name":"selenocysteine metabolism","type":"exact"}],"termid":"GO:0016259","terms_by_termid":{"GO:0016259":null}}


id: MONDO:0015636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with nematodes of the genus dirofilaria, usually in animals, especially dogs, but occasionally in humans.","definition_xrefs":["MESH:D004184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dirofilariasis","secondary_identifiers":["SCTID:73328005","ICD9:125.6","EFO:0007239","GARD:11908","icd11.foundation:1349492056","MEDGEN:4344","UMLS:C0012602","DOID:1082","Orphanet:166291"],"synonyms":[{"name":"Dirofilaria caused disease or disorder","type":"exact"},{"name":"Dirofilaria disease or disorder","type":"exact"},{"name":"Dirofilaria infectious disease","type":"exact"},{"name":"infection by Dirofilaria","type":"exact"}],"termid":"MONDO:0015636","xrefs":{"Monarch":{"xref_id":"0015636"}}}


id: PBO:0046408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial cell adhesion molecule","termid":"PBO:0046408"}


id: PBO:0079718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 5","termid":"PBO:0079718"}


id: MONDO:0003203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pituitary carcinoma (obsolete MONDO:0003203)","termid":"MONDO:0003203","xrefs":{"Monarch":{"xref_id":"0003203"}}}


id: MONDO:1010239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripheral neuropathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral neuropathy, non-human animal","secondary_identifiers":["OMIA:001150"],"termid":"MONDO:1010239","xrefs":{"Monarch":{"xref_id":"1010239"}}}


id: GO:1905631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glyceraldehyde stimulus.","definition_xrefs":["GOC:TermGenie","PMID:11377826","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"},{"relation_name":"is_a","term_name":"response to glyceraldehyde","termid":"GO:1905630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glyceraldehyde","termid":"GO:1905631"}


id: PBO:0076369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 6","termid":"PBO:0076369"}


id: PBO:0031447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031447"}


id: PBO:0057998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3922","termid":"PBO:0057998"}


id: FYPO:0003332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal protein kinase activity during mitotic interphase","termid":"FYPO:0003332"}


id: FYPO:0001044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal acid phosphatase activity","termid":"FYPO:0001044"}


id: PBO:0060168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTSS I-BAR domain containing 2","termid":"PBO:0060168"}


id: PBO:0046170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELFN1 antisense RNA 1","termid":"PBO:0046170"}


id: PBO:0071419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 25","termid":"PBO:0071419"}


id: GO:0044307
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite arising from another dendrite.","definition_xrefs":["GOC:bc","NIF_Subcellular:sao884265541","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic branch","synonyms":[{"name":"dendrite branch","type":"exact"},{"name":"secondary dendrite","type":"narrow"}],"termid":"GO:0044307"}


id: GO:0048460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the flower. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower formation","secondary_identifiers":["GO:0048410"],"termid":"GO:0048460"}


id: MONDO:0054602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gaze palsy with progressive scoliosis","termid":"MONDO:0011810"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gaze palsy, familial horizontal, with progressive scoliosis, 2","secondary_identifiers":["UMLS:C4479640","MEDGEN:1393733","GARD:16234","OMIM:617542"],"synonyms":[{"name":"HGPPS2","type":"related"},{"name":"gaze palsy, familial horizontal, with progressive scoliosis, 2","type":"exact"}],"termid":"MONDO:0054602","xrefs":{"Monarch":{"xref_id":"0054602"}}}


id: GO:0046270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-toluenecarboxylate biosynthetic process (obsolete GO:0046270)","synonyms":[{"name":"4-toluenecarboxylate anabolism","type":"exact"},{"name":"4-toluenecarboxylate biosynthesis","type":"exact"},{"name":"4-toluenecarboxylate biosynthetic process","type":"exact"},{"name":"4-toluenecarboxylate formation","type":"exact"},{"name":"4-toluenecarboxylate synthesis","type":"exact"}],"termid":"GO:0046270"}


id: GO:1905110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pulmonary blood vessel remodeling.","definition_xrefs":["GOC:TermGenie","PMID:22161164","GOC:bc","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood vessel remodeling","termid":"GO:0060313"},{"relation_name":"is_a","term_name":"regulation of pulmonary blood vessel remodeling","termid":"GO:1905109"},{"relation_name":"negatively_regulates","term_name":"pulmonary blood vessel remodeling","termid":"GO:0101010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pulmonary blood vessel remodeling","synonyms":[{"name":"down regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"down-regulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"downregulation of pulmonary blood vessel remodeling","type":"exact"},{"name":"inhibition of pulmonary blood vessel remodeling","type":"narrow"},{"name":"negative regulation of pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:1905110"}


id: GO:0032381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sterol transport","termid":"GO:0032372"},{"relation_name":"is_a","term_name":"negative regulation of intracellular lipid transport","termid":"GO:0032378"},{"relation_name":"is_a","term_name":"regulation of intracellular sterol transport","termid":"GO:0032380"},{"relation_name":"negatively_regulates","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular sterol transport","synonyms":[{"name":"down regulation of intracellular sterol transport","type":"exact"},{"name":"down-regulation of intracellular sterol transport","type":"exact"},{"name":"downregulation of intracellular sterol transport","type":"exact"},{"name":"inhibition of intracellular sterol transport","type":"narrow"}],"termid":"GO:0032381"}


id: FYPO:0006919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitotic interphase","synonyms":[{"name":"normal protein localisation to nucleus during mitotic interphase","type":"exact"},{"name":"normal protein localization to nucleus during interphase of mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006919"}


id: GO:0090180
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88784,113487],"is_not":false,"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vitamin metabolic process","termid":"GO:0046136"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of thiamine biosynthetic process","termid":"GO:0070623"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"thiamine biosynthetic process","termid":"GO:0009228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of thiamin biosynthetic process","type":"exact"}],"termid":"GO:0090180","terms_by_termid":{"GO:0090180":null}}


id: GO:0006661
data:
  {"annotated_genes":["SJAG_02289","SJAG_04924","SJAG_03506","SJAG_01416","SJAG_03292","SJAG_01227","SJAG_01570","SJAG_00114","SJAG_00999","SJAG_00053","SJAG_01236","SJAG_04537","SJAG_02913","SJAG_03170","SJAG_06383","SJAG_03131","SJAG_02321","SJAG_00846","SJAG_02613","SJAG_04337","SJAG_00296","SJAG_06425","SJAG_03066","SJAG_02488","SJAG_04975","SJAG_04881","SJAG_03672","SJAG_01148","SJAG_01860","SJAG_01571","SJAG_02804","SJAG_03878","SJAG_04545","SJAG_01863","SJAG_00068","SJAG_01876","SJAG_05278","SJAG_00295","SJAG_04165","SJAG_00831","SJAG_03801","SJAG_02776","SJAG_03115","SJAG_04119","SJAG_02523","SJAG_04930","SJAG_05330","SJAG_05327","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76318,79945,92389,116814,118632],"is_not":false,"summary":null,"term":"GO:0006661"},{"annotations":[91599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[92753,60206,62276,87182,75286,76802,57640,69453,77989,74530,72806,103560,63192,72994,58151,71482,58040,89300,62851,75309,76211,76108,77252,77522,77612,72434,57993,77245,77255,103498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[104165,90163],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[96467,92981,110927,118274,90974,111054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[71153,61424,62856,61311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[117345],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00063":null,"SJAG_00068":null,"SJAG_00114":null,"SJAG_00295":null,"SJAG_00296":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00999":null,"SJAG_01148":null,"SJAG_01227":null,"SJAG_01236":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01571":null,"SJAG_01860":null,"SJAG_01863":null,"SJAG_01876":null,"SJAG_02289":null,"SJAG_02321":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02613":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03131":null,"SJAG_03170":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04930":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_05330":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1660514","Reactome:R-HSA-1660517","Reactome:R-HSA-1483226","Reactome:R-HSA-1483248","GO:0046489","Reactome:R-HSA-1660499","Reactome:R-HSA-1660516"],"synonyms":[{"name":"PtdIns biosynthesis","type":"exact"},{"name":"PtdIns biosynthetic process","type":"exact"},{"name":"phosphatidylinositol anabolism","type":"exact"},{"name":"phosphatidylinositol biosynthesis","type":"exact"},{"name":"phosphatidylinositol formation","type":"exact"},{"name":"phosphatidylinositol synthesis","type":"exact"},{"name":"phosphoinositide biosynthesis","type":"exact"},{"name":"phosphoinositide biosynthetic process","type":"exact"}],"termid":"GO:0006661","terms_by_termid":{"GO:0006506":null,"GO:0006661":null,"GO:0036092":null,"GO:0046854":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: MOD:01437
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-proline residue, and an L-serine residue to cyclo[(prolylserin)-O-yl] cysteinate.","definition_xrefs":["RESID:AA0489#TRI","PubMed:7961166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo[(prolylserin)-O-yl] cysteinate","termid":"MOD:01629"},{"relation_name":"is_a","term_name":"crosslinked L-proline residue","termid":"MOD:02054"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cyclo[(prolylserin)-O-yl] cysteinate (Cys-Pro-Ser cross-link)","synonyms":[{"name":"(3,6-dioxopyrrolo[4,5-a]piperazin-2-yl)methyl cysteinate","type":"exact"},{"name":"MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"},{"name":"[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"}],"termid":"MOD:01437"}


id: PBO:0059661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 27","termid":"PBO:0059661"}


id: PBO:0061162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyltransferase 2","termid":"PBO:0061162"}


id: PBO:0078009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF-type zinc finger domain containing 1","termid":"PBO:0078009"}


id: MONDO:0030069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hyper-IgE recurrent infection syndrome 5, autosomal recessive","secondary_identifiers":["MEDGEN:1716052","OMIM:618944","UMLS:C5394550"],"synonyms":[{"name":"HIES5","type":"exact"},{"name":"HYPER-IgE RECURRENT INFECTION SYNDROME 5, AUTOSOMAL RECESSIVE","type":"exact"},{"name":"hyper-IgE recurrent infection syndrome 5, autosomal recessive","type":"exact"}],"termid":"MONDO:0030069","xrefs":{"Monarch":{"xref_id":"0030069"}}}


id: PBO:0065680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase 2","termid":"PBO:0065680"}


id: PBO:0087724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA transcriptional regulatory complex; not present in SAGA-like complex SLIK/SALSA; required for SAGA-mediated inhibition at some promoters","termid":"PBO:0087724"}


id: GO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-31 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:30328794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-31 production","secondary_identifiers":["GO:0072636"],"synonyms":[{"name":"IL-31 production","type":"exact"},{"name":"interleukin-31 secretion","type":"narrow"}],"termid":"GO:0072635"}


id: GO:1900261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of RNA-directed 5'-3' RNA polymerase activity.","definition_xrefs":["GOC:TermGenie","GOC:pf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of RNA-dependent RNA polymerase activity (obsolete GO:1900261)","synonyms":[{"name":"activation of 3D polymerase activity","type":"exact"},{"name":"activation of PB1 proteins","type":"related"},{"name":"activation of PB2 proteins","type":"related"},{"name":"activation of RDRP","type":"related"},{"name":"activation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"activation of RNA replicase activity","type":"exact"},{"name":"activation of RNA synthetase activity","type":"related"},{"name":"activation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"activation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"activation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"activation of RNA-directed RNA polymerase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"activation of phage f2 replicase","type":"narrow"},{"name":"activation of polymerase L","type":"related"},{"name":"activation of ribonucleic acid replicase activity","type":"exact"},{"name":"activation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"activation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"activation of ribonucleic replicase activity","type":"exact"},{"name":"activation of ribonucleic synthetase activity","type":"related"},{"name":"activation of transcriptase","type":"broad"},{"name":"positive regulation of 3D polymerase activity","type":"exact"},{"name":"positive regulation of PB1 proteins","type":"related"},{"name":"positive regulation of PB2 proteins","type":"related"},{"name":"positive regulation of RDRP","type":"related"},{"name":"positive regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"positive regulation of RNA replicase activity","type":"exact"},{"name":"positive regulation of RNA synthetase activity","type":"related"},{"name":"positive regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"positive regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"positive regulation of RNA-directed RNA polymerase activity","type":"broad"},{"name":"positive regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"positive regulation of phage f2 replicase","type":"narrow"},{"name":"positive regulation of polymerase L","type":"related"},{"name":"positive regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"positive regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"positive regulation of ribonucleic replicase activity","type":"exact"},{"name":"positive regulation of ribonucleic synthetase activity","type":"related"},{"name":"positive regulation of transcriptase","type":"broad"},{"name":"up regulation of 3D polymerase activity","type":"exact"},{"name":"up regulation of PB1 proteins","type":"related"},{"name":"up regulation of PB2 proteins","type":"related"},{"name":"up regulation of Q-beta replicase activity","type":"exact"},{"name":"up regulation of RDRP","type":"related"},{"name":"up regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"up regulation of RNA replicase activity","type":"exact"},{"name":"up regulation of RNA synthetase activity","type":"related"},{"name":"up regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"up regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"up regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"up regulation of phage f2 replicase","type":"narrow"},{"name":"up regulation of polymerase L","type":"related"},{"name":"up regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"up regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"up regulation of ribonucleic replicase activity","type":"exact"},{"name":"up regulation of ribonucleic synthetase activity","type":"related"},{"name":"up regulation of transcriptase","type":"broad"},{"name":"up-regulation of 3D polymerase activity","type":"exact"},{"name":"up-regulation of PB1 proteins","type":"related"},{"name":"up-regulation of PB2 proteins","type":"related"},{"name":"up-regulation of Q-beta replicase activity","type":"exact"},{"name":"up-regulation of RDRP","type":"related"},{"name":"up-regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"up-regulation of RNA replicase activity","type":"exact"},{"name":"up-regulation of RNA synthetase activity","type":"related"},{"name":"up-regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"up-regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"up-regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"up-regulation of phage f2 replicase","type":"narrow"},{"name":"up-regulation of polymerase L","type":"related"},{"name":"up-regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"up-regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"up-regulation of ribonucleic replicase activity","type":"exact"},{"name":"up-regulation of ribonucleic synthetase activity","type":"related"},{"name":"up-regulation of transcriptase","type":"broad"},{"name":"upregulation of 3D polymerase activity","type":"exact"},{"name":"upregulation of PB1 proteins","type":"related"},{"name":"upregulation of PB2 proteins","type":"related"},{"name":"upregulation of Q-beta replicase activity","type":"exact"},{"name":"upregulation of RDRP","type":"related"},{"name":"upregulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"upregulation of RNA replicase activity","type":"exact"},{"name":"upregulation of RNA synthetase activity","type":"related"},{"name":"upregulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"upregulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"upregulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"upregulation of phage f2 replicase","type":"narrow"},{"name":"upregulation of polymerase L","type":"related"},{"name":"upregulation of ribonucleic acid replicase activity","type":"exact"},{"name":"upregulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"upregulation of ribonucleic replicase activity","type":"exact"},{"name":"upregulation of ribonucleic synthetase activity","type":"related"},{"name":"upregulation of transcriptase","type":"broad"}],"termid":"GO:1900261"}


id: PBO:0005637
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.8","termid":"PBO:0005637"}


id: PBO:0076421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 2","termid":"PBO:0076421"}


id: SO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding transcript derived from the transcript of the telomere.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_transcript","synonyms":[{"name":"telomeric transcript","type":"exact"}],"termid":"SO:0001927"}


id: GO:0033097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround an amyloplast and form the amyloplast envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"amyloplast envelope","termid":"GO:0033096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amyloplast membrane","termid":"GO:0033097"}


id: GO:0140843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine (position 7).","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain S7 O-GlcNAc transferase activity","termid":"GO:0140843"}


id: PBO:0064981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME N-terminal like, pseudogene","termid":"PBO:0064981"}


id: GO:0102433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-phenylalanine + O2 + an N10-formyl-tetrahydrofolate = L-tyrosine + a 10-formyltetrahydrofolate-4a-carbinolamine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete phenylalanine 4-hydroxylase (N10-formyl-tetrahydrofolate dependent) activity (obsolete GO:0102433)","termid":"GO:0102433"}


id: PBO:0063768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 1","termid":"PBO:0063768"}


id: GO:0061371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the heart with respect to the left and right halves of the organism.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of heart left/right asymmetry","synonyms":[{"name":"determination of cardiac left/right asymmetry","type":"exact"}],"termid":"GO:0061371"}


id: MONDO:0013862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 7","secondary_identifiers":["DOID:0081150","GARD:15836","MEDGEN:762276","NANDO:2200801","OMIM:614699","UMLS:C3542922"],"synonyms":[{"name":"CVID7","type":"related"},{"name":"immunodeficiency, common variable, 7","type":"exact"},{"name":"immunodeficiency, common variable, type 7","type":"exact"}],"termid":"MONDO:0013862","xrefs":{"Monarch":{"xref_id":"0013862"}}}


id: PBO:0079576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin D pseudogene 1","termid":"PBO:0079576"}


id: GO:1904656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception of sweet taste.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1716172","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of sweet taste","synonyms":[{"name":"regulation of sweet taste perception","type":"exact"}],"termid":"GO:1904656"}


id: PBO:0055237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2664","termid":"PBO:0055237"}


id: PR:P41412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- res2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle-related protein res2/pct1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.09c","synonyms":[{"name":"Spom972h-res2","type":"exact"}],"termid":"PR:P41412"}


id: MONDO:0017753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of peroxisomal alpha-, beta- and omega-oxidation (obsolete MONDO:0017753)","secondary_identifiers":["icd11.foundation:1092479335","Orphanet:309810"],"synonyms":[{"name":"disorder of peroxisomal alpha-, beta- and omega-oxidation","type":"exact"}],"termid":"MONDO:0017753","xrefs":{"Monarch":{"xref_id":"0017753"}}}


id: GO:0099577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating translation occurring at the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"regulation of translation at synapse, modulating synaptic transmission","termid":"GO:0099547"},{"relation_name":"is_a","term_name":"regulation of translation at presynapse","termid":"GO:0140244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0010467"],"is_obsolete":false,"name":"regulation of translation at presynapse, modulating synaptic transmission","termid":"GO:0099577"}


id: MONDO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005713 (obsolete MONDO:0005713)","secondary_identifiers":["NANDO:2200890"],"termid":"MONDO:0005713","xrefs":{"Monarch":{"xref_id":"0005713"}}}


id: GO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-12 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-12 receptor activity","synonyms":[{"name":"IL-12 receptor activity","type":"exact"},{"name":"IL-12R","type":"exact"}],"termid":"GO:0016517"}


id: PBO:0110500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STMN3 pseudogene 1","termid":"PBO:0110500"}


id: PBO:0063628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 4","termid":"PBO:0063628"}


id: GO:0050514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spermidine + putrescine = sym-homospermidine + propane-1,3-diamine.","definition_xrefs":["EC:2.5.1.45","MetaCyc:2.5.1.45-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"homospermidine synthase (spermidine-specific) activity","secondary_identifiers":["RHEA:11236"],"synonyms":[{"name":"spermidine:putrescine 4-aminobutyltransferase (propane-1,3-diamine-forming)","type":"related"}],"termid":"GO:0050514"}


id: MONDO:0012004
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85634],"is_not":false,"summary":null,"term":"MONDO:0012004"}]},"cv_name":"mondo","definition":"A very rare, slow-growing, clinically serious endocrine tumor that generally develops in mid-adulthood. PRTC presents as a palpable painless mass in the neck and causes severe hypercalcemia and related symptoms, non-specific gastrointestinal manifestations, as well as renal and bone complications related to primary hyperparathyroidism (nephrolithiasis, impaired renal function, osteoporosis, bone pain, and pathologic fractures, etc.). Some PRTCs are however non-functioning tumors.","definition_xrefs":["Orphanet:143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"malignant tumor of parathyroid gland","termid":"MONDO:0021311"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"parathyroid gland carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C4906","ONCOTREE:PTHC","UMLS:C0687150","ICD9:194.1","DOID:1540","EFO:1000456","GARD:7329","MEDGEN:146361","OMIM:608266","SCTID:255037004"],"synonyms":[{"name":"PRTC","type":"related"},{"name":"adenocarcinoma of parathyroid","type":"exact"},{"name":"adenocarcinoma of parathyroid gland","type":"exact"},{"name":"adenocarcinoma of the parathyroid","type":"exact"},{"name":"adenocarcinoma of the parathyroid gland","type":"exact"},{"name":"cancer of parathyroid gland","type":"broad"},{"name":"cancer of the parathyroid gland","type":"broad"},{"name":"carcinoma of parathyroid","type":"exact"},{"name":"carcinoma of parathyroid gland","type":"exact"},{"name":"carcinoma of the parathyroid","type":"exact"},{"name":"carcinoma of the parathyroid gland","type":"exact"},{"name":"malignant neoplasm of parathyroid gland","type":"broad"},{"name":"malignant neoplasm of the parathyroid","type":"broad"},{"name":"malignant tumour of parathyroid gland","type":"broad"},{"name":"parathyroid adenocarcinoma","type":"exact"},{"name":"parathyroid cancer","type":"broad"},{"name":"parathyroid carcinoma","type":"exact"},{"name":"parathyroid gland adenocarcinoma","type":"exact"},{"name":"parathyroid gland cancer","type":"broad"},{"name":"parathyroid gland carcinoma","type":"exact"},{"name":"parathyroid gland neoplasm","type":"broad"},{"name":"parathyroid neoplasm","type":"broad"}],"termid":"MONDO:0012004","terms_by_termid":{"MONDO:0012004":null},"xrefs":{"Monarch":{"xref_id":"0012004"}}}


id: PBO:0017709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omega-amidase (predicted)","termid":"PBO:0017709"}


id: PBO:0039688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC regulator of WNT signaling pathway 2","termid":"PBO:0039688"}


id: MONDO:0007029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by branchial arch anomalies (branchial clefts, fistulae, cysts), hearing impairment (malformations of the auricle with pre-auricular pits, conductive or sensorineural hearing impairment), and renal malformations (urinary tree malformation, renal hypoplasia or agenesis, renal dysplasia, renal cysts).","definition_xrefs":["Orphanet:107"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"branchio-oto-renal syndrome","secondary_identifiers":["GARD:10147","MESH:D019280","ICD9:759.89","DOID:14702","MedDRA:10071135","NCIT:C98983","icd11.foundation:504227287","OMIMPS:113650","UMLS:C0265234","NANDO:1200675","SCTID:290006","Wikipedia:Branchio-oto-renal_syndrome","MEDGEN:82693"],"synonyms":[{"name":"Branchio oto renal syndrome","type":"related"},{"name":"Branchio-Oto-renal syndrome","type":"exact"},{"name":"Branchio-otorenal dysplasia","type":"exact"},{"name":"Melnick-Fraser syndrome","type":"exact"},{"name":"bor syndrome","type":"related"},{"name":"branchio-oto-renal syndrome","type":"exact"},{"name":"branchiootorenal dysplasia","type":"exact"},{"name":"branchiootorenal syndrome","type":"exact"}],"termid":"MONDO:0007029","xrefs":{"Monarch":{"xref_id":"0007029"}}}


id: PBO:0089613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated HORMA domain protein Atg101","termid":"PBO:0089613"}


id: GO:0050546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)pyruvate + H+ = (4-hydroxyphenyl)acetaldehyde + CO2.","definition_xrefs":["RHEA:18697","EC:4.1.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxyphenylpyruvate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03341","MetaCyc:4.1.1.80-RXN"],"synonyms":[{"name":"4-hydroxyphenylpyruvate carboxy-lyase (4-hydroxyphenylacetaldehyde-forming)","type":"related"},{"name":"4-hydroxyphenylpyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0050546"}


id: MONDO:0017976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of sex development of gynecological interest (obsolete MONDO:0017976)","secondary_identifiers":["Orphanet:325620"],"synonyms":[{"name":"DSD of gynecological interest","type":"exact"}],"termid":"MONDO:0017976","xrefs":{"Monarch":{"xref_id":"0017976"}}}


id: GO:0061300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the cerebellum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum vasculature development","termid":"GO:0061300"}


id: PBO:0031331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_canavanine","termid":"PBO:0031331"}


id: FYPO:0002847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the proteasome is lower than normal.","definition_xrefs":["PomBase:mah","PMID:22906049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level in proteasome","synonyms":[{"name":"decreased proteasomal protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in proteasome during mitotic cell cycle","type":"related"},{"name":"decreased protein level in proteasome during vegetative growth","type":"exact"},{"name":"reduced protein level in proteasome","type":"exact"}],"termid":"FYPO:0002847"}


id: PBO:0071410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 16","termid":"PBO:0071410"}


id: GO:0070563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the vitamin D receptor signaling pathway activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin D receptor signaling pathway","termid":"GO:0070562"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"vitamin D receptor signaling pathway","termid":"GO:0070561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of vitamin D receptor signaling pathway","synonyms":[{"name":"down regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"down-regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"downregulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"inhibition of vitamin D receptor signaling pathway","type":"narrow"},{"name":"negative regulation of VDR signaling pathway","type":"exact"},{"name":"negative regulation of VDR signalling pathway","type":"exact"},{"name":"negative regulation vitamin D receptor signalling pathway","type":"exact"}],"termid":"GO:0070563"}


id: FYPO:0000163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is abnormal. Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PomBase:mah","GO:0016236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal autophagy","termid":"FYPO:0008082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal macroautophagy","secondary_identifiers":["FYPO:0000379"],"synonyms":[{"name":"abnormal autophagy","type":"broad"},{"name":"autophagy: abnormal","type":"broad"}],"termid":"FYPO:0000163"}


id: MONDO:0012186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations in the FANCI gene, encoding Fanconi anemia group I protein.","definition_xrefs":["NCIT:C129026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0002280","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Fanconi anemia complementation group I","secondary_identifiers":["OMIM:609053","GARD:15448","MEDGEN:323016","UMLS:C1836861","MESH:C563802","DOID:0111091"],"synonyms":[{"name":"FANCI","type":"exact"},{"name":"Fanconi Anemia, complementation Group 1","type":"related"},{"name":"Fanconi Anemia, complementation group type 1","type":"exact"},{"name":"Fanconi anaemia complementation group type I","type":"exact"},{"name":"Fanconi anemia complementation group I","type":"exact"},{"name":"Fanconi anemia complementation group type I","type":"exact"},{"name":"Fanconi anemia, complementation group I","type":"related"}],"termid":"MONDO:0012186","xrefs":{"Monarch":{"xref_id":"0012186"}}}


id: GO:1900541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fumonisin biosynthetic process","synonyms":[{"name":"fumonisin anabolism","type":"exact"},{"name":"fumonisin biosynthesis","type":"exact"},{"name":"fumonisin formation","type":"exact"},{"name":"fumonisin synthesis","type":"exact"}],"termid":"GO:1900541"}


id: PBO:0043976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 2","termid":"PBO:0043976"}


id: PBO:0039609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR cell adhesion molecule 2","termid":"PBO:0039609"}


id: MONDO:0011997
data:
  {"annotated_genes":["SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85736],"is_not":false,"summary":null,"term":"MONDO:0011997"}]},"cv_name":"mondo","definition":"A type of Hermansky-Pudlak syndrome (HPS), a multi-system disorder characterized by oculocutaneous albinism, bleeding diathesis and neutropenia.","definition_xrefs":["Orphanet:183678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"},{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:664500","UMLS:C1842362","DOID:0060540","NANDO:2200733","ICD10CM:E70.3","MEDGEN:374912","GARD:15026","MESH:C537709","NCIT:C150368","OMIM:608233"],"synonyms":[{"name":"AP3B1 Hermansky-Pudlak syndrome","type":"exact"},{"name":"HPS-2","type":"exact"},{"name":"HPS2","type":"exact"},{"name":"Hermansky Pudlak syndrome 2","type":"related"},{"name":"Hermansky-Pudlak syndrome 2","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in AP3B1","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 2","type":"exact"},{"name":"Hermansky-Pudlak syndrome with neutropenia","type":"related"},{"name":"Platelet defects and oculocutaneous albinism","type":"related"}],"termid":"MONDO:0011997","terms_by_termid":{"MONDO:0011997":null},"xrefs":{"Monarch":{"xref_id":"0011997"}}}


id: GO:1905921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acetylcholine biosynthetic process.","definition_xrefs":["GOC:aruk","GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:20164328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"regulates","term_name":"acetylcholine biosynthetic process","termid":"GO:0008292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acetylcholine biosynthetic process","synonyms":[{"name":"regulation of acetylcholine anabolism","type":"exact"},{"name":"regulation of acetylcholine biosynthesis","type":"exact"},{"name":"regulation of acetylcholine formation","type":"exact"},{"name":"regulation of acetylcholine synthesis","type":"exact"}],"termid":"GO:1905921"}


id: GO:0051060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in pullulan (a linear polymer of alpha-(1,6)-linked maltotriose units) and in amylopectin and glycogen, and the a- and b-limit dextrins of amylopectin and glycogen.","definition_xrefs":["EC:3.2.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"pullulanase activity","secondary_identifiers":["MetaCyc:RXN-1824"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"alpha-dextrin endo-1,6-alpha-glucosidase activity","type":"exact"},{"name":"amylopectin 6-glucanohydrolase activity","type":"exact"},{"name":"bacterial debranching enzyme","type":"related"},{"name":"debranching enzyme activity","type":"broad"},{"name":"limit dextrinase","type":"related"},{"name":"pullulan 6-glucanohydrolase activity","type":"exact"},{"name":"pullulan alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0051060"}


id: MONDO:0009355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hooft disease","secondary_identifiers":["OMIM:236300","UMLS:C0268479","MESH:C535329","MEDGEN:75686"],"synonyms":[{"name":"Hooft disease","type":"exact"},{"name":"delayed physical development, erythematosquamous eruption, opaque leukonychia, intellectual disability, and low serum lipids","type":"related"}],"termid":"MONDO:0009355","xrefs":{"Monarch":{"xref_id":"0009355"}}}


id: PR:Q9P6K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30C2.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6K8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30C2.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30C2.03","synonyms":[{"name":"Spom972h-SPAC30C2.03","type":"exact"}],"termid":"PR:Q9P6K8"}


id: FYPO:0000384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of macroautophagy is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased macroautophagy","synonyms":[{"name":"autophagy: increased","type":"broad"}],"termid":"FYPO:0000384"}


id: MONDO:0018607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"combined hamartoma of the retina and retinal pigment epithelium","secondary_identifiers":["UMLS:C1862062","GARD:21843","MEDGEN:396281","NCIT:C174548","Orphanet:440727"],"synonyms":[{"name":"CHR-RPE","type":"exact"},{"name":"combined hamartoma of the retina and RPE","type":"exact"}],"termid":"MONDO:0018607","xrefs":{"Monarch":{"xref_id":"0018607"}}}


id: GO:0045716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045716)","synonyms":[{"name":"activation of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"positive regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor synthesis","type":"exact"},{"name":"stimulation of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"up regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor biosynthetic process","type":"exact"}],"termid":"GO:0045716"}


id: PBO:0111058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, Human BICC1 ortholog, implicated in RNA metabolism","termid":"PBO:0111058"}


id: GO:0141023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts host cell adhesion ito its extracellular matrix. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cell-cell adhesion","synonyms":[{"name":"disruption by symbiont of host cell-cell adhesion","type":"exact"}],"termid":"GO:0141023"}


id: GO:0140603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + H+ Pi. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP hydrolysis activity (obsolete GO:0140603)","termid":"GO:0140603"}


id: PBO:0017581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-UTP complex subunit Utp8 (predicted)","termid":"PBO:0017581"}


id: GO:0062205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-copalyl diphosphate = diphosphate + miltiradiene.","definition_xrefs":["PMID:24990389","RHEA:33983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"miltiradiene synthase activity","secondary_identifiers":["EC:4.2.3.131","MetaCyc:RXN-13338","GO:0102353"],"synonyms":[{"name":"multiradiene synthase activity","type":"related"}],"termid":"GO:0062205"}


id: PBO:0038314
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_email","termid":"PBO:0038314"}


id: PR:O14137
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3C7.13c gene.","definition_xrefs":["UniProtKB:O14137","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase C7.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.13c","synonyms":[{"name":"G6PD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC3C7.13c","type":"exact"}],"termid":"PR:O14137"}


id: MONDO:0024431
data:
  {"annotated_genes":["SJAG_01344","SJAG_05194","SJAG_03011","SJAG_05213","SJAG_03785","SJAG_00938","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[86543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[86727,86728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[85058,85059,85060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[86666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_05194":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"bilirubin metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:541273","SCTID:80006005","UMLS:C0268305"],"synonyms":[{"name":"disorder of bilirubin metabolism","type":"exact"}],"termid":"MONDO:0024431","terms_by_termid":{"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0024431"}}}


id: GO:0070214
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the protein-tyrosine kinase CSK and the GTPase-activating protein (GAP)-associated p62 (GAP-A.p62); may mediate translocation of proteins, including GAP and CSK, to membrane or cytoskeletal regions upon c-Src activation.","definition_xrefs":["PMID:7544435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CSK-GAP-A.p62 complex","termid":"GO:0070214"}


id: GO:1905371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramide phosphoethanolamine.","definition_xrefs":["GOC:TermGenie","GOC:hjd","PMID:25667419","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ceramide phosphoethanolamine metabolic process","synonyms":[{"name":"ceramide phosphoethanolamine metabolism","type":"exact"}],"termid":"GO:1905371"}


id: GO:0006778
data:
  {"annotated_genes":["SJAG_00097","SJAG_01841","SJAG_03862","SJAG_05283","SJAG_01786","SJAG_01372","SJAG_03173","SJAG_02876","SJAG_04397","SJAG_04109","SJAG_01192","SJAG_00366","SJAG_04944","SJAG_03961","SJAG_01155","SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78000,79687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[104989,73960,113677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[106398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[58935,62904,67115,79682,64512,57025,62796,59907],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006782"},{"annotations":[71109,76522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[74730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any member of a large group of derivatives or analogs of porphyrin. Porphyrins consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["GOC:jl","Wikipedia:Porphyrin#Natural_formation","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-189445"],"synonyms":[{"name":"porphyrin metabolic process","type":"related"},{"name":"porphyrin metabolism","type":"related"}],"termid":"GO:0006778","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: MONDO:0009640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial complex I deficiency, nuclear type (obsolete MONDO:0009640)","termid":"MONDO:0009640","xrefs":{"Monarch":{"xref_id":"0009640"}}}


id: PBO:0074753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 112","termid":"PBO:0074753"}


id: FYPO:0004703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is longer and has a larger volume than normal, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"},{"relation_name":"is_a","term_name":"viable swollen elongated vegetative cell","termid":"FYPO:0002479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable curved, elongated, swollen vegetative cell","synonyms":[{"name":"curved elongated swollen viable cell","type":"exact"},{"name":"viable curved swollen elongated cell","type":"exact"},{"name":"viable curved, elongated, swollen cell during vegetative growth","type":"exact"},{"name":"viable curved, elongated, swollen vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004703"}


id: PBO:0086152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with ribosomes; involved in TOR signaling; binds G4 quadruplex and purine motif triplex nucleic acid; helps maintain telomere structure; protein abundance increases in response to DNA replication stress; serves as a ribosome preservation factor both during quiescence and recovery","termid":"PBO:0086152"}


id: MONDO:0011870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Annular epidermolytic ichthyosis (AEI) is a rare clinical variant of epidermolytic ichthyosis (EI) characterized by the presence of a blistering phenotype at birth and the development from early infancy of annular polycyclic erythematous scales on the trunk and extremities.","definition_xrefs":["Orphanet:281139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant epidermolytic ichthyosis","termid":"MONDO:0020702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"annular epidermolytic ichthyosis","secondary_identifiers":["OMIMPS:607602","MESH:C564367","icd11.foundation:280058464","GARD:17304","MEDGEN:334410","SCTID:718631006","UMLS:C1843463"],"synonyms":[{"name":"AEI","type":"exact"},{"name":"Ciehk","type":"related"},{"name":"epidermolytic ichthyosis, annular","type":"related"},{"name":"ichthyosis, annular epidermolytic","type":"exact"},{"name":"ichthyosis, cyclic, with epidermolytic hyperkeratosis","type":"related"}],"termid":"MONDO:0011870","xrefs":{"Monarch":{"xref_id":"0011870"}}}


id: GO:0050814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of epothilone, a drug obtained from the myxobacteria Sporangium cellulosum that interferes with cell division. Some epothilones are being studied as treatments for cancer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"epothilone metabolic process","termid":"GO:0050813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"epothilone biosynthetic process","synonyms":[{"name":"epothilone anabolism","type":"exact"},{"name":"epothilone biosynthesis","type":"exact"},{"name":"epothilone formation","type":"exact"},{"name":"epothilone synthesis","type":"exact"}],"termid":"GO:0050814"}


id: PBO:0036036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_mitotic_chromosome_segregation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0036036"}


id: MONDO:0019976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conditions characterized by persistent brain damage or dysfunction as sequelae of cranial trauma. This disorder may result from diffuse axonal injury; intracranial hemorrhages; brain edema; and other conditions. Clinical features may include dementia; focal neurologic deficits; persistent vegetative state; akinetic mutism; or coma.","definition_xrefs":["MESH:D020208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"dementia pugilistica","secondary_identifiers":["DOID:0081291","Orphanet:97353","UMLS:C0149843","GARD:19371","MEDGEN:508441","SCTID:230283005"],"synonyms":[{"name":"Boxer's dementia","type":"exact"},{"name":"chronic traumatic encephalopathy","type":"exact"},{"name":"punch-drunk syndrome","type":"exact"}],"termid":"MONDO:0019976","xrefs":{"Monarch":{"xref_id":"0019976"}}}


id: PBO:0068127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 434","termid":"PBO:0068127"}


id: PBO:0048853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine (N-acetyl)-6-sulfatase","termid":"PBO:0048853"}


id: MONDO:1012564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"growth and respiratory lethal syndrome, non-human animal","termid":"MONDO:1011935"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth and respiratory lethal syndrome, cattle","secondary_identifiers":["OMIA:002560-9913"],"termid":"MONDO:1012564","xrefs":{"Monarch":{"xref_id":"1012564"}}}


id: GO:0102581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 4-coumaryl-CoA + H+ = cyanidin 3-O-(6-O-(E)-4-coumaroyl-beta-D-glucoside) + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside-p-coumaroyltransferase activity (obsolete GO:0102581)","termid":"GO:0102581"}


id: PBO:0051309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-1 (pseudogene)","termid":"PBO:0051309"}


id: SO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with nickel ions.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nickel_ion_contact_site","secondary_identifiers":["BS:00142"],"synonyms":[{"name":"Ni_contact_site","type":"exact"},{"name":"polypeptide nickel ion contact site","type":"exact"}],"termid":"SO:0001101"}


id: GO:0016151
data:
  {"annotated_genes":["SJAG_04896","SJAG_04679","SJAG_05338","SJAG_00309","SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58497,58766,59107,65089,65304],"is_not":false,"summary":null,"term":"GO:0016151"}]},"cv_name":"molecular_function","definition":"Binding to a nickel (Ni) cation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_02766":null,"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"nickel cation binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null},"synonyms":[{"name":"Ni binding","type":"exact"},{"name":"nickel binding","type":"exact"}],"termid":"GO:0016151","terms_by_termid":{"GO:0016151":null}}


id: MOD:00394
data:
  {"annotated_genes":["SJAG_00733","SJAG_02522"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80387,80469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an acetyl group.","definition_xrefs":["Unimod:1","DeltaMass:0","PubMed:12175151","PubMed:11857757","PubMed:14730666","PubMed:15350136","PubMed:11999733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"is_obsolete":false,"name":"acetylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"AcRes","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"Acetylation (N terminus, N epsilon of Lysine, O of Serine) (Ac)","type":"exact"}],"termid":"MOD:00394","terms_by_termid":{"MOD:00050":null}}


id: PBO:0031314
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zinc","termid":"PBO:0031314"}


id: PR:Q9US38
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.03 gene.","definition_xrefs":["UniProtKB:Q9US38","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AB hydrolase superfamily protein C1039.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.03","synonyms":[{"name":"Spom972h-SPAC1039.03","type":"exact"}],"termid":"PR:Q9US38"}


id: PBO:0050045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, G","termid":"PBO:0050045"}


id: PBO:0065313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 36","termid":"PBO:0065313"}


id: PBO:0052906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-3","termid":"PBO:0052906"}


id: PR:O74918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11097:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.08","secondary_identifiers":["UniProtKB:O74918"],"synonyms":[{"name":"SPCC757.08","type":"related"},{"name":"Spom972h-EXOSC9","type":"exact"},{"name":"ribosomal RNA-processing protein 45 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74918"}


id: GO:0042204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any s-triazine compound. These compounds include many pesticides of widespread use in agriculture, and are characterized by a symmetrical hexameric ring consisting of alternating carbon and nitrogen atoms.","definition_xrefs":["UM-BBD_pathwayID:tria"],"direct_ancestors":[{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"s-triazine compound catabolic process","synonyms":[{"name":"s-triazine compound breakdown","type":"exact"},{"name":"s-triazine compound catabolism","type":"exact"},{"name":"s-triazine compound degradation","type":"exact"}],"termid":"GO:0042204"}


id: PBO:0083623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase; forms heterodimer with Rad6p to monoubiquitinate PCNA-K164; heterodimer binds single-stranded DNA and has single-stranded DNA dependent ATPase activity; required for postreplication repair; SUMO-targeted ubiquitin ligase (STUbl) that contains a SUMO-interacting motif (SIM) which stimulates its ubiquitin ligase activity towards the sumoylated form of PCNA","termid":"PBO:0083623"}


id: PR:O74733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02722","PRO:DNx","PANTHER:PTHR10644:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.08","secondary_identifiers":["UniProtKB:O74733"],"synonyms":[{"name":"Spom972h-CPSF1","type":"exact"},{"name":"cleavage factor two protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74733"}


id: PBO:0081453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 320","termid":"PBO:0081453"}


id: FYPO:0004222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H4-K20 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004222"}


id: PBO:0116396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mug2/mug135/meu2 family protein, with repeat expansion","termid":"PBO:0116396"}


id: PBO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 5","termid":"PBO:0071772"}


id: GO:0052381
data:
  {"annotated_genes":["SJAG_01575"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70574],"is_not":false,"summary":null,"term":"GO:0052381"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + tRNA = diphosphate + tRNA containing 6-dimethylallyladenosine.","definition_xrefs":["EC:2.5.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01575":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016765","GO:0140101","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tRNA dimethylallyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-6274","GO:0004811","Reactome:R-HSA-6787567","RHEA:26482","Reactome:R-HSA-6784462"],"synonyms":[{"name":"dimethylallyl-diphosphate:tRNA dimethylallyltransferase activity","type":"exact"},{"name":"tRNA isopentenyltransferase activity","type":"related"},{"name":"tRNA prenyltransferase activity","type":"broad"}],"termid":"GO:0052381","terms_by_termid":{"GO:0052381":null}}


id: PATO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a solid","termid":"PATO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hardness","synonyms":[{"name":"impenetrability","type":"related"},{"name":"toughness","type":"related"}],"termid":"PATO:0000048"}


id: PBO:0006313
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ortholog qualifier","termid":"PBO:0006313"}


id: GO:0016050
data:
  {"annotated_genes":["SJAG_01571","SJAG_05184","SJAG_01748","SJAG_04739","SJAG_03005","SJAG_01697","SJAG_04023","SJAG_00906","SJAG_03558","SJAG_02100","SJAG_02349","SJAG_04391","SJAG_00204","SJAG_03403","SJAG_05207","SJAG_01242","SJAG_00826","SJAG_00284","SJAG_03268","SJAG_02241","SJAG_00430","SJAG_04513","SJAG_02587","SJAG_03670","SJAG_01633","SJAG_05344","SJAG_02539","SJAG_04978","SJAG_03536","SJAG_01324","SJAG_00416","SJAG_03347","SJAG_01379","SJAG_03153","SJAG_02315","SJAG_03848","SJAG_01516","SJAG_04966","SJAG_03907","SJAG_03889","SJAG_04615","SJAG_00557","SJAG_01772","SJAG_01448","SJAG_00380","SJAG_00072","SJAG_00171","SJAG_04643","SJAG_05345","SJAG_03552"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117555,70971],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[72753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090114"},{"annotations":[75278,76790,71092,74863,74508,76249,78137],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"},{"annotations":[76922,99501,70885,74291,79482,99299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[79557,102452,76240,79865,74669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007032"},{"annotations":[77192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048194"},{"annotations":[95708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[74100],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034496"},{"annotations":[75976,71033],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003400"},{"annotations":[75212],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[69673,73371,70448,76098,79055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006900"},{"annotations":[95278],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006901"},{"annotations":[76277,112485,97876,77753,77483,71713,100639,100869,117322,90332,109457,75891,117367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[77395,73555,75728,57526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00171":null,"SJAG_00204":null,"SJAG_00284":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00826":null,"SJAG_00906":null,"SJAG_01242":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01448":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01748":null,"SJAG_01772":null,"SJAG_02100":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_02587":null,"SJAG_03005":null,"SJAG_03153":null,"SJAG_03268":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03558":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_03907":null,"SJAG_04023":null,"SJAG_04391":null,"SJAG_04513":null,"SJAG_04615":null,"SJAG_04643":null,"SJAG_04739":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null,"SJAG_05207":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vesicle organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vesicle organisation","type":"exact"},{"name":"vesicle organization and biogenesis","type":"related"}],"termid":"GO:0016050","terms_by_termid":{"GO:0003400":null,"GO:0006900":null,"GO:0006901":null,"GO:0006906":null,"GO:0007032":null,"GO:0034058":null,"GO:0034496":null,"GO:0035493":null,"GO:0048194":null,"GO:0048205":null,"GO:0048210":null,"GO:0048280":null,"GO:0090110":null,"GO:0090114":null}}


id: CHEBI:600520
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micafungin","termid":"CHEBI:600520"}


id: PBO:0045155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 10 opposite strand","termid":"PBO:0045155"}


id: PBO:0016925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu32","termid":"PBO:0016925"}


id: MONDO:0019671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radial hemimelia is a congenital longitudinal deficiency of the radius bone of the forearm characterized by partial or total absence of the radius.","definition_xrefs":["Orphanet:93321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemimelia","termid":"MONDO:0016240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"radial hemimelia","secondary_identifiers":["ICD9:755.59","icd11.foundation:653269137","SCTID:48008009","GARD:225","MEDGEN:539344","UMLS:C0265581"],"synonyms":[{"name":"congenital longitudinal deficiency of the radius","type":"exact"},{"name":"radial clubhand","type":"exact"},{"name":"radial longitidinal meromelia","type":"exact"},{"name":"radial ray agenesis","type":"exact"}],"termid":"MONDO:0019671","xrefs":{"Monarch":{"xref_id":"0019671"}}}


id: SO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000066 gene_by_polyadenylation_attribute (obsolete SO:0000066)","termid":"SO:0000066"}


id: GO:1990600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of a single-stranded DNA endodeoxyribonuclease activator activity.","definition_xrefs":["PMID:25203555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease activator activity","termid":"GO:0140656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"single-stranded DNA endodeoxyribonuclease activator activity","termid":"GO:1990600"}


id: MONDO:0006284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the parotid gland, submandibular gland, or sublingual gland.","definition_xrefs":["NCIT:C5907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"major salivary gland cancer","termid":"MONDO:0044743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"major salivary gland carcinoma","secondary_identifiers":["UMLS:C1334549","MEDGEN:235287","EFO:1000344"],"synonyms":[{"name":"carcinoma of Major salivary gland","type":"exact"},{"name":"carcinoma of major salivary gland","type":"exact"},{"name":"carcinoma of the major salivary gland","type":"exact"},{"name":"major salivary gland cancer","type":"broad"},{"name":"major salivary gland carcinoma","type":"exact"}],"termid":"MONDO:0006284","xrefs":{"Monarch":{"xref_id":"0006284"}}}


id: GO:0080132
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72040],"is_not":false,"summary":null,"term":"GO:0080132"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of the C-2 position in a fatty acid. The 2-hydroxylation may occur on free fatty acids or within the fatty acyl chain of a sphingolipid.","definition_xrefs":["PMID:36902339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fatty acid 2-hydroxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5693761"],"synonyms":[{"name":"fatty acid alpha-hydroxylase activity","type":"exact"}],"termid":"GO:0080132","terms_by_termid":{"GO:0080132":null}}


id: PBO:0078244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 23-1 (non-functional)","termid":"PBO:0078244"}


id: MONDO:0004953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common type of invasive breast carcinoma, accounting for approximately 70% of breast carcinomas. The gross appearance is usually typical with an irregular stellate outline. Microscopically, randomly arranged epithelial elements are seen. When large sheets of malignant cells are present, necrosis may be seen. With adequate tissue sampling, in situ carcinoma can be demonstrated in association with the infiltrating carcinoma. The in situ component is nearly always ductal but occasionally may be lobular or both.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast ductal adenocarcinoma","termid":"MONDO:0005590"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive ductal breast carcinoma","secondary_identifiers":["SCTID:408643008","NCIT:C4194","DOID:3008","ONCOTREE:IDC","ICDO:8500/3","ICDO:8521/3","MEDGEN:730612","ICD9:174.8","UMLS:C1412014","EFO:0000186"],"synonyms":[{"name":"breast invasive ductal carcinoma","type":"related"},{"name":"ductal adenocarcinoma","type":"exact"},{"name":"infiltrating ductal adenocarcinoma","type":"exact"},{"name":"infiltrating ductal breast carcinoma","type":"exact"},{"name":"infiltrating ductal carcinoma","type":"exact"},{"name":"infiltrating ductal carcinoma of breast","type":"exact"},{"name":"infiltrating ductal carcinoma of the breast","type":"exact"},{"name":"invasive ductal adenocarcinoma","type":"exact"},{"name":"invasive ductal breast carcinoma","type":"exact"},{"name":"invasive ductal carcinoma","type":"exact"},{"name":"invasive ductal carcinoma of breast","type":"exact"},{"name":"invasive ductal carcinoma of the breast","type":"exact"},{"name":"invasive ductal carcinoma, NST","type":"exact"},{"name":"invasive ductal carcinoma, No specific type","type":"exact"}],"termid":"MONDO:0004953","xrefs":{"Monarch":{"xref_id":"0004953"}}}


id: PBO:0001667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Did4","termid":"PBO:0001667"}


id: GO:0015126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed movement of bile acid and bile salts out of a hepatocyte and into the bile canaliculus by means of an agent such as a transporter or pore. Bile canaliculi are the thin tubes formed by hepatocyte membranes. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"canalicular bile acid transmembrane transporter activity","termid":"GO:0015126"}


id: FYPO:0008235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of the nuclear RNA-directed RNA polymerase complex is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished nuclear RNA-directed RNA polymerase complex assembly","termid":"FYPO:0008235"}


id: FYPO:0003095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and elongated, and continues to become longer over successive generations. The cell also undergoes mitosis beginning when the cell is longer than normal.","definition_xrefs":["PMID:24013504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell, elongated upon mitotic entry","termid":"FYPO:0003481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"viable elongated vegetative cell, with progressive elongation","synonyms":[{"name":"progressively elongating viable vegetative cell","type":"exact"}],"termid":"FYPO:0003095"}


id: PBO:0075905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8SIA5 divergent transcript","termid":"PBO:0075905"}


id: PBO:0054272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1659","termid":"PBO:0054272"}


id: PBO:0027205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_heat_shock","termid":"PBO:0027205"}


id: FYPO:0007291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UDP-galactose measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular UDP-galactose level","synonyms":[{"name":"decreased cellular UDP-galactose level during mitotic cell cycle","type":"related"},{"name":"decreased cellular UDP-galactose level during vegetative growth","type":"exact"},{"name":"idecreased cellular UDP-D-galactose level","type":"exact"},{"name":"reduced cellular UDP-galactose level","type":"exact"}],"termid":"FYPO:0007291"}


id: GO:0010164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cesium stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cesium ion","synonyms":[{"name":"response to cesium","type":"exact"}],"termid":"GO:0010164"}


id: FYPO:0004659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to UV","synonyms":[{"name":"abolished protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ultraviolet light","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to UV","type":"exact"}],"termid":"FYPO:0004659"}


id: GO:0017099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a very-long-chain (2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["RHEA:19181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"very-long-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.9","Reactome:R-HSA-548831","MetaCyc:RXN-13451"],"synonyms":[{"name":"very long-chain-acyl-CoA dehydrogenase activity","type":"exact"},{"name":"very-long-chain acyl-CoA dehydrogenase activity","type":"exact"}],"termid":"GO:0017099"}


id: GO:1902776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-sulfoquinovose(1-).","definition_xrefs":["GOC:dph","GO_REF:0000068","GOC:TermGenie","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) metabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) metabolism","type":"exact"}],"termid":"GO:1902776"}


id: PBO:0012601
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin","termid":"PBO:0012601"}


id: PBO:0076955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 3","termid":"PBO:0076955"}


id: MONDO:0005610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disabling osteochondrodysplasia with osteosclerosis, cone-shaped metaphysis, and shortening of the diaphysis. It is endemic in parts of Siberia and northern China. Mineral deficiencies (e.g., selenium, iodine), fungal cereal contamination, and water contamination may be contributing factors in its etiology.","definition_xrefs":["MESH:D057767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Kashin-Beck disease","secondary_identifiers":["ICD9:716.06","ICD9:716.08","SCTID:270505009","EFO:0006511","UMLS:C2745963","ICD9:716.00","icd11.foundation:211396970","MEDGEN:412531"],"termid":"MONDO:0005610","xrefs":{"Monarch":{"xref_id":"0005610"}}}


id: PBO:0043027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 2B","termid":"PBO:0043027"}


id: GO:1901036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-glutamine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of L-glutamine import across plasma membrane","termid":"GO:1901034"},{"relation_name":"is_a","term_name":"positive regulation of glutamine transport","termid":"GO:2000487"},{"relation_name":"positively_regulates","term_name":"L-glutamine import across plasma membrane","termid":"GO:1903803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-glutamine import across plasma membrane","synonyms":[{"name":"activation of L-glutamine import","type":"narrow"},{"name":"activation of L-glutamine uptake","type":"exact"},{"name":"positive regulation of L-glutamine import","type":"broad"},{"name":"positive regulation of L-glutamine uptake","type":"exact"},{"name":"up regulation of L-glutamine import","type":"exact"},{"name":"up regulation of L-glutamine uptake","type":"exact"},{"name":"up-regulation of L-glutamine import","type":"exact"},{"name":"up-regulation of L-glutamine uptake","type":"exact"},{"name":"upregulation of L-glutamine import","type":"exact"},{"name":"upregulation of L-glutamine uptake","type":"exact"}],"termid":"GO:1901036"}


id: GO:0090221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from within the mitotic spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0000226","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"mitotic spindle-templated microtubule nucleation","termid":"GO:0090221"}


id: PBO:0039218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member D1","termid":"PBO:0039218"}


id: FYPO:0001742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which isochromosome formation occurs more frequently than in wild type cells. In isochromosome formation, one chromosome arm is lost and the other arm is duplicated in its place.","definition_xrefs":["PomBase:mah","PomBase:al","PMID:18923422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased isochromosome formation","synonyms":[{"name":"increased occurrence of isochromosome formation","type":"exact"}],"termid":"FYPO:0001742"}


id: GO:0106379
data:
  {"annotated_genes":["SJAG_03797","SJAG_01651"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61715,96875],"is_not":false,"summary":null,"term":"GO:0106379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-(d)RTP + H20 = 8-oxo-(d)RMP + diphosphate + H+.","definition_xrefs":["PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01651":null,"SJAG_03797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0047429","GO:0016787"],"is_obsolete":false,"name":"8-oxo-(d)RTP hydrolase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9731228"],"termid":"GO:0106379","terms_by_termid":{"GO:0106379":null}}


id: MOD:01181
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartate 4-methyl ester.","definition_xrefs":["OMSSA:69","PubMed:16888766","PubMed:1556110","PubMed:9629898","RESID:AA0435","Unimod:34#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"monomethylated L-aspartic acid","termid":"MOD:01681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-aspartic acid 4-methyl ester","synonyms":[{"name":"(2S)-2-amino-4-methoxy-4-oxobutanoic acid","type":"exact"},{"name":"2-aminobutanedioic acid 4-methyl ester","type":"exact"},{"name":"4-methyl L-2-aminosuccinic acid","type":"exact"},{"name":"4-methyl L-aspartate","type":"exact"},{"name":"4-methyl L-hydrogen aspartate","type":"exact"},{"name":"L-aspartic acid 4-methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"O4MeAsp","type":"exact"},{"name":"aspartic acid 4-methyl ester","type":"exact"},{"name":"aspartic acid beta-methyl ester","type":"exact"},{"name":"meesterd","type":"exact"}],"termid":"MOD:01181"}


id: MONDO:0033369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 60","secondary_identifiers":["DOID:0080432","GARD:16270","OMIM:617929","UMLS:C4693663","MEDGEN:1638894"],"synonyms":[{"name":"DEE60","type":"exact"},{"name":"EIEE60","type":"exact"},{"name":"developmental and epileptic encephalopathy 60","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 60","type":"exact"}],"termid":"MONDO:0033369","xrefs":{"Monarch":{"xref_id":"0033369"}}}


id: GO:0043817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-O-phospho-3-sulfolactate = phosphoenolpyruvate + sulfite.","definition_xrefs":["RHEA:22784","EC:4.4.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphosulfolactate synthase activity","secondary_identifiers":["MetaCyc:4.4.1.19-RXN","KEGG_REACTION:R07476"],"synonyms":[{"name":"(2R)-O-phospho-3-sulfolactate sulfo-lyase (phosphoenolpyruvate-forming)","type":"related"},{"name":"(2R)-O-phospho-3-sulfolactate sulfo-lyase activity","type":"exact"},{"name":"(2R)-phospho-3-sulfolactate synthase activity","type":"related"},{"name":"PSL synthase activity","type":"related"}],"termid":"GO:0043817"}


id: GO:0044639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation via the lectin pathway in the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:20837040","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, lectin pathway in another organism (obsolete GO:0044639)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, lectin pathway in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044639"}


id: MONDO:0009237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperplasia characterized by the presence of a focal proliferation of epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal epithelial hyperplasia","secondary_identifiers":["OMIM:229045","EFO:0007275","UMLS:C0206067","ICD9:528.79","NCIT:C97083","MEDGEN:60066","MESH:D017573","SCTID:6121001","DOID:5362"],"synonyms":[{"name":"FEH, oral","type":"related"},{"name":"focal epithelial hyperplasia, oral","type":"related"},{"name":"heck disease","type":"exact"},{"name":"heck's disease","type":"exact"},{"name":"multifocal epithelial hyperplasia","type":"exact"}],"termid":"MONDO:0009237","xrefs":{"Monarch":{"xref_id":"0009237"}}}


id: GO:0075273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of zygosporangium development","termid":"GO:0075272"},{"relation_name":"positively_regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zygosporangium development","termid":"GO:0075273"}


id: FYPO:0000381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of macroautophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased macroautophagy","synonyms":[{"name":"autophagy: decreased","type":"broad"},{"name":"decreased autophagy","type":"broad"},{"name":"reduced macroautophagy","type":"exact"}],"termid":"FYPO:0000381"}


id: MONDO:0003542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental pulp calcification","secondary_identifiers":["SCTID:57602001","MESH:D003784","MEDGEN:41471","UMLS:C0011401","ICD10CM:K04.2","icd11.foundation:1672640309","DOID:5608"],"synonyms":[{"name":"pulp calcification","type":"exact"},{"name":"pulp calcifications","type":"exact"},{"name":"pulpal calcifications","type":"exact"}],"termid":"MONDO:0003542","xrefs":{"Monarch":{"xref_id":"0003542"}}}


id: PBO:0043514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 9","termid":"PBO:0043514"}


id: PBO:0065290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 4","termid":"PBO:0065290"}


id: FYPO:0006957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidinol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular histidinol level","synonyms":[{"name":"increased cellular L-histidinol level","type":"exact"},{"name":"increased cellular histidinol level during mitotic cell cycle","type":"related"},{"name":"increased cellular histidinol level during vegetative growth","type":"exact"},{"name":"increased histidinol accumulation","type":"related"}],"termid":"FYPO:0006957"}


id: PBO:0017604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex ubiquitin -protein ligase E3 subunit Apc11","termid":"PBO:0017604"}


id: MOD:00770
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763","SJAG_03012"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[119217,80263,119297,119216,119298,119215,119214,80264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.01 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.01 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:00770","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0111781
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein","termid":"PBO:0111781"}


id: GO:0047407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribosyl-[dinitrogen reductase] = adenosine diphosphate ribose + [dinitrogen reductase].","definition_xrefs":["EC:3.2.2.24","MetaCyc:3.2.2.24-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ADP-ribosyl-[dinitrogen reductase] hydrolase activity","secondary_identifiers":["RHEA:14493"],"synonyms":[{"name":"ADP-D-ribosyl-dinitrogen reductase ADP-ribosylhydrolase activity","type":"related"},{"name":"ADP-ribosyl glycohydrolase activity","type":"related"},{"name":"ADP-ribosyl-dinitrogen reductase hydrolase activity","type":"related"},{"name":"azoferredoxin glycosidase activity","type":"related"},{"name":"azoferredoxin-activating enzymes","type":"related"},{"name":"dinitrogenase reductase activating glycohydrolase activity","type":"related"},{"name":"dinitrogenase reductase-activating glycohydrolase activity","type":"related"}],"termid":"GO:0047407"}


id: PBO:0090686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex CAF1 family ribonuclease subunit 7/8","termid":"PBO:0090686"}


id: PBO:0053063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linker for activation of T cells family member 2","termid":"PBO:0053063"}


id: GO:0032027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"myosin light chain binding","termid":"GO:0032027"}


id: PBO:0039742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L4","termid":"PBO:0039742"}


id: MONDO:0003458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid, benign neoplasm that arises from the endometrial cavity. It is characterized by the presence of a mesenchymal core component and an epithelial component that forms a lining on the mesenchymal core.","definition_xrefs":["NCIT:C6337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"},{"relation_name":"is_a","term_name":"benign neoplasm of corpus uteri","termid":"MONDO:0021525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus adenofibroma","secondary_identifiers":["MEDGEN:277849","UMLS:C1336901","DOID:5475"],"synonyms":[{"name":"adenofibroma of body of uterus","type":"exact"},{"name":"adenofibroma of corpus uteri","type":"exact"},{"name":"adenofibroma of the body of uterus","type":"exact"},{"name":"adenofibroma of the corpus uteri","type":"exact"},{"name":"adenofibroma of the uterine body","type":"exact"},{"name":"adenofibroma of the uterine corpus","type":"exact"},{"name":"adenofibroma of uterine body","type":"exact"},{"name":"adenofibroma of uterine corpus","type":"related"},{"name":"body of uterus adenofibroma","type":"exact"},{"name":"corpus uteri adenofibroma","type":"exact"},{"name":"uterine body adenofibroma","type":"exact"}],"termid":"MONDO:0003458","xrefs":{"Monarch":{"xref_id":"0003458"}}}


id: PBO:0041941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 9","termid":"PBO:0041941"}


id: MONDO:1011308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital nervous system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308","xrefs":{"Monarch":{"xref_id":"1011308"}}}


id: PBO:0055641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3080","termid":"PBO:0055641"}


id: PATO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being short and wide and tapered distally.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullet-shaped","termid":"PATO:0002087"}


id: GO:0048809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of analia are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is analia morphogenesis in Drosophila melanogaster.","definition_xrefs":["GOC:ai","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"genital disc morphogenesis","termid":"GO:0007483"},{"relation_name":"part_of","term_name":"analia development","termid":"GO:0007487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"analia morphogenesis","termid":"GO:0048809"}


id: GO:1903281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium:sodium antiporter activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:19683723","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium:sodium antiporter activity","synonyms":[{"name":"activation of calcium:sodium antiporter activity","type":"narrow"},{"name":"activation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"activation of sodium/calcium exchanger","type":"narrow"},{"name":"activation of sodium:calcium exchange","type":"related"},{"name":"positive regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"positive regulation of sodium/calcium exchanger","type":"exact"},{"name":"positive regulation of sodium:calcium exchange","type":"related"},{"name":"up regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"up regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"up regulation of sodium/calcium exchanger","type":"exact"},{"name":"up regulation of sodium:calcium exchange","type":"related"},{"name":"up-regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"up-regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"up-regulation of sodium/calcium exchanger","type":"exact"},{"name":"up-regulation of sodium:calcium exchange","type":"related"},{"name":"upregulation of calcium:sodium antiporter activity","type":"exact"},{"name":"upregulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"upregulation of sodium/calcium exchanger","type":"exact"},{"name":"upregulation of sodium:calcium exchange","type":"related"}],"termid":"GO:1903281"}


id: MONDO:0019678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A5 (BDA5) is a very rare congenital malformation of the digits characterized by absence of the middle phalanges (usually of digits 2 to 5), nail dysplasia and duplicated terminal phalanx of the thumb.","definition_xrefs":["Orphanet:93389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A5","secondary_identifiers":["GARD:982","icd11.foundation:291957825","MESH:C537091","OMIM:112900","MEDGEN:929661","SCTID:720570007","UMLS:C4303992"],"synonyms":[{"name":"absent middle phalanges of digits 2-5 with nail dysplasia","type":"related"},{"name":"brachydactyly type A5 nail dysplasia","type":"related"},{"name":"brachydactyly with absence of middle phalanges and hypoplastic nails","type":"related"}],"termid":"MONDO:0019678","xrefs":{"Monarch":{"xref_id":"0019678"}}}


id: PBO:0031863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G1/S_transition_delay","termid":"PBO:0031863"}


id: PATO:0000491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000491 sensitivity value (obsolete PATO:0000491)","termid":"PATO:0000491"}


id: PBO:0075415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermadhesin family member","termid":"PBO:0075415"}


id: PBO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1 (predicted)","termid":"PBO:0033828"}


id: GO:0098544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein complex is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of protein complexes that move away.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein complex location","termid":"GO:0098544"}


id: MONDO:0007147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cessation of air flow during sleep due to upper airway obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sleep apnea syndrome","termid":"MONDO:0005296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstructive sleep apnea syndrome","secondary_identifiers":["NCIT:C27168","HP:0002870","OMIM:107650","MEDGEN:101045","ICD10CM:G47.33","UMLS:C0520679","MESH:D020181","EFO:0003918","SCTID:78275009","ICD9:780.57","DOID:0050848","ICD9:327.23"],"synonyms":[{"name":"Apneas, obstructive sleep","type":"related"},{"name":"OSAHS","type":"related"},{"name":"Osa","type":"related"},{"name":"apnea, obstructive sleep","type":"related"},{"name":"obstructive sleep Apneas","type":"related"},{"name":"obstructive sleep apnea","type":"exact"},{"name":"obstructive sleep apnea syndrome","type":"exact"},{"name":"sleep Apneas, obstructive","type":"related"},{"name":"sleep apnea hypopnea syndrome","type":"related"},{"name":"sleep apnea syndrome, obstructive","type":"related"},{"name":"sleep apnea/hypopnea syndrome","type":"related"},{"name":"syndrome, obstructive sleep apnea","type":"related"},{"name":"syndrome, sleep apnea, obstructive","type":"related"},{"name":"syndrome, upper airway resistance, sleep apnea","type":"related"},{"name":"upper airway resistance sleep apnea syndrome","type":"related"}],"termid":"MONDO:0007147","xrefs":{"Monarch":{"xref_id":"0007147"}}}


id: PBO:0031803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_G1/S_phase_transition_(obsolete_FYPO:0000397)","termid":"PBO:0031803"}


id: PBO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog pseudogene 1","termid":"PBO:0070431"}


id: GO:1990699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoleyl moiety, a 16-carbon monounsaturated fatty acid (C16:1), from some substrate.","definition_xrefs":["PMID:25731175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"palmitoleyl hydrolase activity","termid":"GO:1990699"}


id: GO:1904648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rotenone stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18538940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to rotenone","termid":"GO:1904647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rotenone","termid":"GO:1904648"}


id: MONDO:0022755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 mosaic monosomy","secondary_identifiers":["UMLS:C2931250","MESH:C536581","MEDGEN:419755"],"synonyms":[{"name":"Mosaic monosomy 18","type":"related"},{"name":"Mosaic monosomy chromosome 18","type":"related"},{"name":"monosomy 18 mosaicism","type":"related"}],"termid":"MONDO:0022755","xrefs":{"Monarch":{"xref_id":"0022755"}}}


