# terms

id: MONDO:0100419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly KIT exon 8 mutation. (A molecular genetic abnormality indicating the presence of a mutation in exon 8 of the KIT gene located within 4q11-q12.)","definition_xrefs":["NCIT:C128660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, KIT exon 8 mutation","synonyms":[{"name":"AML, CD117 Exon 8 Mutation","type":"exact"},{"name":"AML, KIT Proto-Oncogene Tyrosine Protein Kinase Gene Exon 8 Mutation","type":"exact"},{"name":"AML, KIT exon 8 mutation","type":"exact"},{"name":"AML, c-KIT Exon 8 Mutation","type":"exact"},{"name":"AML, v-Kit Hardy-Zuckerman 4 Feline Sarcoma Viral Oncogene Homolog Gene Exon 8 Mutation","type":"exact"}],"termid":"MONDO:0100419","xrefs":{"Monarch":{"xref_id":"0100419"}}}


id: PBO:0062986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 1","termid":"PBO:0062986"}


id: PBO:0063187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated 3","termid":"PBO:0063187"}


id: GO:0032353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"negatively_regulates","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hormone biosynthetic process","synonyms":[{"name":"down regulation of hormone biosynthetic process","type":"exact"},{"name":"down-regulation of hormone biosynthetic process","type":"exact"},{"name":"downregulation of hormone biosynthetic process","type":"exact"},{"name":"inhibition of hormone biosynthetic process","type":"narrow"}],"termid":"GO:0032353"}


id: GO:0008028
data:
  {"annotated_genes":["SJAG_01924","SJAG_02779","SJAG_04593","SJAG_02780","SJAG_01960","SJAG_00276","SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[79032,71489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[71488,79031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[76330,93102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[94154,76688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"}]},"cv_name":"molecular_function","definition":"Enables the transfer of monocarboxylic acids from one side of a membrane to the other. A monocarboxylic acid is an organic acid with one COOH group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01505":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"monocarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9645220","Reactome:R-HSA-429749","GO:0008505","Reactome:R-HSA-433698","Reactome:R-HSA-5624211"],"synonyms":[{"name":"monocarboxylate carrier","type":"narrow"},{"name":"prostaglandin/thromboxane transporter activity","type":"narrow"}],"termid":"GO:0008028","terms_by_termid":{"GO:0015123":null,"GO:0015225":null,"GO:0050833":null,"GO:0089721":null,"GO:1901604":null}}


id: PBO:0049412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2C","termid":"PBO:0049412"}


id: MONDO:0004980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common chronic pruritic inflammatory skin disease with a strong genetic component. Onset typically occurs during the first 2 years of life.","definition_xrefs":["OMIM:603165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"atopic eczema","secondary_identifiers":["UMLS:C0011615","SCTID:24079001","MEDGEN:41502","MESH:D003876","EFO:0000274","icd11.foundation:215767047","ICD9:691.8","ICD10CM:L20","DOID:3310","SCTID:200775004","NCIT:C3001","HP:0001047","ICD9:691"],"synonyms":[{"name":"ATOD","type":"exact"},{"name":"Besnier's prurigo","type":"exact"},{"name":"allergic dermatitis","type":"exact"},{"name":"allergic form of dermatitis","type":"exact"},{"name":"atopic dermatitis","type":"exact"},{"name":"atopic eczema","type":"exact"},{"name":"atopic neurodermatitis","type":"exact"},{"name":"dermatitis, atopic","type":"exact"},{"name":"eczema","type":"exact"},{"name":"eczema, atopic","type":"exact"},{"name":"eczematous dermatitis","type":"exact"}],"termid":"MONDO:0004980","xrefs":{"Monarch":{"xref_id":"0004980"}}}


id: MONDO:0024313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by Staphylococcus.","definition_xrefs":["NCIT:C35038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal infection","secondary_identifiers":["MEDGEN:52483","EFO:1001849","MESH:D013203","SCTID:56038003","UMLS:C0038160"],"synonyms":[{"name":"staphylococcal infection","type":"exact"}],"termid":"MONDO:0024313","xrefs":{"Monarch":{"xref_id":"0024313"}}}


id: PBO:0030232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030232"}


id: GO:0090200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"},{"relation_name":"positively_regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of release of cytochrome c from mitochondria","termid":"GO:0090200"}


id: PBO:0054940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2354","termid":"PBO:0054940"}


id: SO:0001495
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element I (CDEI) is a conserved region, part of the centromere, consisting of a consensus region that consists of a 25-bp which enables binding by the centromere DNA binding factor 3 (CBF3) complex.","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_III","synonyms":[{"name":"CDEIII","type":"exact"},{"name":"centromere DNA Element III","type":"exact"}],"termid":"SO:0001495"}


id: PBO:0109118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 18, RPL3 N3(tau)-histidine","termid":"PBO:0109118"}


id: PBO:0043989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 3","termid":"PBO:0043989"}


id: PBO:0116542
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmission-distorting killer","termid":"PBO:0116542"}


id: PBO:0005807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Brl1","termid":"PBO:0005807"}


id: PBO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid biosynthesis protein (predicted)","termid":"PBO:0001219"}


id: PBO:0088308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein, lipocalin superfamily Svf2","termid":"PBO:0088308"}


id: PBO:0086747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted member of the oligopeptide transporter (OPT) family of membrane transporters","termid":"PBO:0086747"}


id: GO:0051781
data:
  {"annotated_genes":["SJAG_00082","SJAG_04597","SJAG_03581","SJAG_00514","SJAG_04666","SJAG_01787","SJAG_02838","SJAG_03936","SJAG_00845","SJAG_02392","SJAG_03342","SJAG_05290","SJAG_01805","SJAG_04468","SJAG_04776","SJAG_03631","SJAG_01114","SJAG_03704","SJAG_01188"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94170,89746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[110320,113166,94340,87280,94171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[90523,103490,119036,110562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[106182,106846,104978,115278,117704,113167,77652,93562,89616,92177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[87281,92178,94174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"positively_regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"activation of cell division","type":"narrow"},{"name":"stimulation of cell division","type":"narrow"},{"name":"up regulation of cell division","type":"exact"},{"name":"up-regulation of cell division","type":"exact"},{"name":"upregulation of cell division","type":"exact"}],"termid":"GO:0051781","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: PBO:0059104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 2 pseudogene 1","termid":"PBO:0059104"}


id: PBO:0080315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 79 pseudogene","termid":"PBO:0080315"}


id: SO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genetic feature that encodes a trait used for artificial selection of a subpopulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selection_marker","synonyms":[{"name":"selectable marker","type":"exact"},{"name":"selectable_marker","type":"exact"},{"name":"selection marker","type":"exact"}],"termid":"SO:0002232"}


id: MONDO:0006018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rheumatic syndrome of possibly allergic origin, usually affecting children and adolescents, and characterized by high fever, exanthema, arthralgia, leukocytosis, and increased sedimentation rate.","definition_xrefs":["MESH:D014924"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rheumatic fever","termid":"MONDO:0017767"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wissler syndrome","secondary_identifiers":["DOID:3047","MEDGEN:53087","SCTID:68190001","UMLS:C0043195"],"synonyms":[{"name":"Wissler syndrome","type":"exact"},{"name":"Wissler's subsepsis allergica","type":"exact"},{"name":"Wissler's syndrome","type":"exact"},{"name":"Wissler-Fanconi syndrome (finding)","type":"exact"}],"termid":"MONDO:0006018","xrefs":{"Monarch":{"xref_id":"0006018"}}}


id: SO:0001078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of peptide with secondary structure has hydrogen bonding along the peptide chain that causes a defined conformation of the chain.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_secondary_structure","secondary_identifiers":["http://en.wikipedia.org/wiki/Secondary_structure","BS:00003"],"synonyms":[{"name":"2nary structure","type":"related"},{"name":"polypeptide secondary structure","type":"exact"},{"name":"secondary structure","type":"related"},{"name":"secondary structure region","type":"related"},{"name":"secondary_structure","type":"related"}],"termid":"SO:0001078"}


id: PBO:0075946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 1 (pseudogene)","termid":"PBO:0075946"}


id: PATO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's in which bundles of aligned anatomical fibers have become separated.","definition_xrefs":["PATOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciculation","termid":"PATO:0002013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defasciculated","termid":"PATO:0001959"}


id: PBO:0028790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028790"}


id: PBO:0072027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 3","termid":"PBO:0072027"}


id: PBO:0045267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 like","termid":"PBO:0045267"}


id: MONDO:0016339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete restrictive cardiomyopathy (obsolete MONDO:0016339)","termid":"MONDO:0016339","xrefs":{"Monarch":{"xref_id":"0016339"}}}


id: GO:0071123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular endothelial growth factor C.","definition_xrefs":["PMID:15590642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha9-beta1 integrin-VEGF-C complex","synonyms":[{"name":"ITGA9-ITGB1-VEGFC complex","type":"narrow"}],"termid":"GO:0071123"}


id: GO:0047723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + IMP = D-ribose 5-phosphate + hypoxanthine.","definition_xrefs":["RHEA:20469","EC:3.2.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"inosinate nucleosidase activity","secondary_identifiers":["MetaCyc:INOSINATE-NUCLEOSIDASE-RXN","KEGG_REACTION:R01128"],"synonyms":[{"name":"5'-inosinate phosphoribohydrolase activity","type":"related"}],"termid":"GO:0047723"}


id: PBO:0067427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 546, pseudogene","termid":"PBO:0067427"}


id: PBO:0081251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF22 antisense RNA 1","termid":"PBO:0081251"}


id: GO:0033670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of NAD+ kinase activity (obsolete GO:0033670)","synonyms":[{"name":"NAD kinase regulator","type":"narrow"},{"name":"regulation of NAD kinase activity","type":"exact"}],"termid":"GO:0033670"}


id: PBO:0078093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 10","termid":"PBO:0078093"}


id: PBO:0067889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 191","termid":"PBO:0067889"}


id: GO:0019515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactose, via the intermediate UDP-galactose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose catabolic process","termid":"GO:0005990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lactose catabolic process via UDP-galactose","synonyms":[{"name":"lactose breakdown via UDP-galactose","type":"exact"},{"name":"lactose degradation via UDP-galactose","type":"exact"}],"termid":"GO:0019515"}


id: MONDO:1010130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrichosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrichosis, non-human animal","secondary_identifiers":["OMIA:000513"],"termid":"MONDO:1010130","xrefs":{"Monarch":{"xref_id":"1010130"}}}


id: PBO:0080038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 24","termid":"PBO:0080038"}


id: MONDO:0014326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the KLHL41 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"intermediate nemaline myopathy","termid":"MONDO:0015736"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"nemaline myopathy 9","secondary_identifiers":["DOID:0110929","UMLS:C3810384","GARD:16007","OMIM:615731","MEDGEN:816714"],"synonyms":[{"name":"KLHL41 nemaline myopathy","type":"exact"},{"name":"NEM9","type":"exact"},{"name":"nemaline myopathy 9","type":"exact"},{"name":"nemaline myopathy caused by mutation in KLHL41","type":"exact"},{"name":"nemaline myopathy type 9","type":"exact"}],"termid":"MONDO:0014326","xrefs":{"Monarch":{"xref_id":"0014326"}}}


id: PBO:0071439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 45","termid":"PBO:0071439"}


id: GO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of restoring the photoreceptor cell to its unexcited state after termination of the stimulus (photon).","definition_xrefs":["PMID:8316831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of opsin-mediated signaling pathway","termid":"GO:0022400"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of opsin-mediated signaling pathway","synonyms":[{"name":"deactivation of opsin mediated signaling","type":"narrow"},{"name":"deactivation of rhodopsin mediated signalling","type":"narrow"},{"name":"negative regulation of rhodopsin-mediated signaling pathway","type":"narrow"},{"name":"rod response recovery","type":"broad"}],"termid":"GO:0016059"}


id: PBO:0027237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_large_ribosomal_subunit_level","termid":"PBO:0027237"}


id: GO:0044170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host smooth ER has no ribosomes adhering to the outer surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell smooth endoplasmic reticulum","synonyms":[{"name":"host smooth endoplasmic reticulum","type":"exact"}],"termid":"GO:0044170"}


id: PBO:0059895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 18","termid":"PBO:0059895"}


id: GO:1904761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myofibroblast differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20533548","GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of myofibroblast differentiation","termid":"GO:1904760"},{"relation_name":"negatively_regulates","term_name":"myofibroblast differentiation","termid":"GO:0036446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myofibroblast differentiation","synonyms":[{"name":"down regulation of myofibroblast cell differentiation","type":"exact"},{"name":"down regulation of myofibroblast differentiation","type":"exact"},{"name":"down-regulation of myofibroblast cell differentiation","type":"exact"},{"name":"down-regulation of myofibroblast differentiation","type":"exact"},{"name":"downregulation of myofibroblast cell differentiation","type":"exact"},{"name":"downregulation of myofibroblast differentiation","type":"exact"},{"name":"inhibition of myofibroblast cell differentiation","type":"narrow"},{"name":"inhibition of myofibroblast differentiation","type":"narrow"},{"name":"negative regulation of myofibroblast cell differentiation","type":"exact"}],"termid":"GO:1904761"}


id: MONDO:0002683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choroid plexus neoplasm that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"choroid plexus cancer","termid":"MONDO:0002681"},{"relation_name":"is_a","term_name":"choroid plexus neoplasm","termid":"MONDO:0016717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult choroid plexus neoplasm","secondary_identifiers":["UMLS:C0796430","DOID:3542","MEDGEN:163268","NCIT:C8568"],"synonyms":[{"name":"adult choroid plexus cancer","type":"related"},{"name":"adult choroid plexus neoplasm","type":"exact"},{"name":"adult choroid plexus tumor","type":"exact"},{"name":"adult choroid plexus tumour","type":"exact"},{"name":"choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus neoplasm of adults","type":"exact"},{"name":"neoplasm of adult choroid plexus","type":"exact"},{"name":"neoplasm of the adult choroid plexus","type":"exact"},{"name":"tumor of adult choroid plexus","type":"exact"},{"name":"tumor of the adult choroid plexus","type":"exact"},{"name":"tumour of adult choroid plexus","type":"exact"},{"name":"tumour of the adult choroid plexus","type":"exact"}],"termid":"MONDO:0002683","xrefs":{"Monarch":{"xref_id":"0002683"}}}


id: GO:0032013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ARF protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ARF protein signal transduction","termid":"GO:0032012"},{"relation_name":"is_a","term_name":"negative regulation of small GTPase mediated signal transduction","termid":"GO:0051058"},{"relation_name":"negatively_regulates","term_name":"ARF protein signal transduction","termid":"GO:0032011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of ARF protein signal transduction","synonyms":[{"name":"down regulation of ARF protein signal transduction","type":"exact"},{"name":"down-regulation of ARF protein signal transduction","type":"exact"},{"name":"downregulation of ARF protein signal transduction","type":"exact"},{"name":"inhibition of ARF protein signal transduction","type":"narrow"}],"termid":"GO:0032013"}


id: GO:0009554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the megasporocyte undergoes meiosis, giving rise to four haploid megaspores in the nucellus.","definition_xrefs":["GOC:mtg_plant","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type sporogenesis","termid":"GO:0048236"},{"relation_name":"part_of","term_name":"embryo sac development","termid":"GO:0009553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"megasporogenesis","synonyms":[{"name":"megaspore development","type":"exact"},{"name":"megaspore mother cell meiosis","type":"exact"},{"name":"meiosis of the megasporocyte","type":"exact"},{"name":"meiotic division of the megasporocyte","type":"exact"}],"termid":"GO:0009554"}


id: PBO:0055409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2839","termid":"PBO:0055409"}


id: PBO:0069083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 330, pseudogene","termid":"PBO:0069083"}


id: SO:0000531
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one V-gene, one D-gene and one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_J_C_cluster","synonyms":[{"name":"V D J C cluster","type":"exact"},{"name":"V-D-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000531"}


id: MOD:00721
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxygenates an L-methionine residue to L-methionine sulfoxide S-diastereomer.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine (S)-sulfoxide","synonyms":[{"name":"MOD_RES Methionine (S)-sulfoxide","type":"exact"},{"name":"S-MetO","type":"exact"}],"termid":"MOD:00721"}


id: MONDO:0012445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the PJVK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 59","secondary_identifiers":["UMLS:C1857744","OMIM:610220","MESH:C565698","DOID:0110511","GARD:22622","MEDGEN:387899"],"synonyms":[{"name":"DFNB59","type":"narrow"},{"name":"PJVK autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 59","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 59","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in PJVK","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 59","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 59","type":"exact"},{"name":"deafness, autosomal recessive 59","type":"narrow"},{"name":"deafness, autosomal recessive type 59","type":"narrow"}],"termid":"MONDO:0012445","xrefs":{"Monarch":{"xref_id":"0012445"}}}


id: MONDO:0008200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant Parkinson disease 1","secondary_identifiers":["MEDGEN:357008","MESH:C566823","DOID:0060367","OMIM:168601","UMLS:C1868595","GARD:18474"],"synonyms":[{"name":"PARK1","type":"related"},{"name":"Parkinson disease 1, autosomal dominant","type":"related"},{"name":"Parkinson disease 1, autosomal dominant Lewy body","type":"related"},{"name":"atypical Parkinson disease","type":"related"},{"name":"autosomal dominant Parkinson disease 1","type":"exact"},{"name":"autosomal dominant Parkinson disease type 1","type":"exact"},{"name":"autosomal dominant Parkinson's disease 1","type":"related"}],"termid":"MONDO:0008200","xrefs":{"Monarch":{"xref_id":"0008200"}}}


id: PR:O74882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase cytochrome b560 subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04199","PANTHER:PTHR10978:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase cytochrome B subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.12c","secondary_identifiers":["UniProtKB:O74882"],"synonyms":[{"name":"Spom972h-SDHC","type":"exact"}],"termid":"PR:O74882"}


id: FYPO:0003473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, producing inviable daughter cells, and in which the septum forms in a position that partitions both nuclei into one compartment, when the cell is subject to salt stress. Cell separation may or may not be completed.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoseptate vegetative cell with binucleate and anucleate compartments","termid":"FYPO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"septation following abnormal chromosome segregation, with binucleate and anucleate compartment formation during cellular response to salt stress","synonyms":[{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation, with binucleate cell formation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003473"}


id: PBO:0041100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSCL2 lipid droplet biogenesis associated, seipin","termid":"PBO:0041100"}


id: GO:0032536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the size of a cell projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection size","termid":"GO:0032536"}


id: GO:0102885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-alpha-cuprenene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"alpha-cuprenene synthase activity","secondary_identifiers":["RHEA:32027","MetaCyc:RXN-8426"],"termid":"GO:0102885"}


id: PBO:0018247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein (Meakin) Moa1","termid":"PBO:0018247"}


id: PBO:0072661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 3","termid":"PBO:0072661"}


id: PBO:0059937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 23","termid":"PBO:0059937"}


id: PBO:0031121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0031121"}


id: GO:0034758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transport","termid":"GO:0034756"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of iron ion transport","synonyms":[{"name":"activation of iron ion transport","type":"narrow"},{"name":"positive regulation of iron transport","type":"exact"},{"name":"stimulation of iron ion transport","type":"narrow"},{"name":"up regulation of iron ion transport","type":"exact"},{"name":"up-regulation of iron ion transport","type":"exact"},{"name":"upregulation of iron ion transport","type":"exact"}],"termid":"GO:0034758"}


id: GO:1903042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte hypertrophy.","definition_xrefs":["GOC:TermGenie","PMID:23928032","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of chondrocyte development","termid":"GO:0061182"},{"relation_name":"is_a","term_name":"regulation of chondrocyte hypertrophy","termid":"GO:1903041"},{"relation_name":"negatively_regulates","term_name":"chondrocyte hypertrophy","termid":"GO:0003415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte hypertrophy","synonyms":[{"name":"down regulation of chondrocyte hypertrophy","type":"exact"},{"name":"down-regulation of chondrocyte hypertrophy","type":"exact"},{"name":"downregulation of chondrocyte hypertrophy","type":"exact"},{"name":"inhibition of chondrocyte hypertrophy","type":"narrow"}],"termid":"GO:1903042"}


id: MONDO:0005598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma associated with increased dopamine excretion.","definition_xrefs":["EFO:0006391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopaminergic neuroblastoma","secondary_identifiers":["PMID:3385588"],"termid":"MONDO:0005598","xrefs":{"Monarch":{"xref_id":"0005598"}}}


id: MONDO:0002676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm composed of fibroblasts. It is characterized by collagen production and a herringbone architectural pattern. It is more commonly seen in middle-aged and older adults. It usually affects the deep soft tissues of extremities, trunk, head and neck. Adult fibrosarcomas may recur and metastasize to the lungs and bones.","definition_xrefs":["NCIT:C7809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conventional fibrosarcoma","termid":"MONDO:0002677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult fibrosarcoma","secondary_identifiers":["DOID:3516","NANDO:2200060","UMLS:C0278595","MEDGEN:75840"],"synonyms":[{"name":"adult fibrosarcoma","type":"exact"},{"name":"adult fibrosarcoma (disease)","type":"exact"},{"name":"fibrosarcoma","type":"broad"},{"name":"fibrosarcoma (disease) of adults","type":"exact"}],"termid":"MONDO:0002676","xrefs":{"Monarch":{"xref_id":"0002676"}}}


id: MONDO:0008363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raindrop hypopigmentation","secondary_identifiers":["MEDGEN:356767","UMLS:C1867393","MESH:C566724","OMIM:179500"],"synonyms":[{"name":"raindrop hypopigmentation","type":"exact"}],"termid":"MONDO:0008363","xrefs":{"Monarch":{"xref_id":"0008363"}}}


id: GO:0047949
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glutarate semialdehyde + NAD+ + H2O = glutarate + NADH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutarate-semialdehyde dehydrogenase (NAD+) activity (obsolete GO:0047949)","synonyms":[{"name":"glutarate semialdehyde dehydrogenase (NAD+) activity","type":"exact"}],"termid":"GO:0047949"}


id: GO:0004781
data:
  {"annotated_genes":["SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66363],"is_not":false,"summary":null,"term":"GO:0004781"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H+ + sulfate = adenosine 5'-phosphosulfate + diphosphate.","definition_xrefs":["EC:2.7.7.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate adenylyltransferase activity","termid":"GO:0004779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03475":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"sulfate adenylyltransferase (ATP) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-3560794","MetaCyc:SULFATE-ADENYLYLTRANS-RXN","Reactome:R-HSA-174392","RHEA:18133"],"synonyms":[{"name":"ATP sulfurylase activity","type":"related"},{"name":"ATP-sulfurylase activity","type":"related"},{"name":"ATP:sulfate adenylyltransferase activity","type":"exact"},{"name":"adenosine-5'-triphosphate sulfurylase activity","type":"related"},{"name":"adenosinetriphosphate sulfurylase activity","type":"related"},{"name":"adenylylsulfate pyrophosphorylase activity","type":"related"},{"name":"sulfate adenylate transferase activity","type":"related"},{"name":"sulfurylase activity","type":"related"},{"name":"sulphate adenylyltransferase (ATP) activity","type":"exact"}],"termid":"GO:0004781","terms_by_termid":{"GO:0004781":null}}


id: PBO:0055023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2438","termid":"PBO:0055023"}


id: PBO:0087032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L15B; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L15, no bacterial homolog; RPL15B has a paralog, RPL15A, that arose from the whole genome duplication; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0087032"}


id: GO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a ventricular septum intermedium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septum morphogenesis","termid":"GO:0060412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum intermedium morphogenesis","termid":"GO:0003288"}


id: GO:0030448
data:
  {"annotated_genes":["SJAG_00124","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119339,119340],"is_not":false,"summary":null,"term":"GO:0030448"}]},"cv_name":"biological_process","definition":"Growth of fungi as threadlike, tubular structures that may contain multiple nuclei and may or may not be divided internally by septa, or cross-walls.","definition_xrefs":["GOC:mcc","ISBN:0471522295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyphal growth","references_by_uniquename":{"PMID:34427722":null},"secondary_identifiers":["GO:0075061"],"synonyms":[{"name":"formation of symbiont invasive hypha in host","type":"exact"},{"name":"formation of symbiont invasive hypha within host","type":"exact"},{"name":"formation of symbiont invasive hypha within host during symbiotic interaction","type":"exact"},{"name":"invasive hyphal growth","type":"exact"},{"name":"symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0030448","terms_by_termid":{"GO:0030448":null}}


id: GO:0050454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme F420 + H(2) + H+ = reduced coenzyme F420.","definition_xrefs":["EC:1.12.98.1","RHEA:23760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","termid":"GO:0046995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"coenzyme F420 hydrogenase activity","secondary_identifiers":["MetaCyc:COENZYME-F420-HYDROGENASE-RXN","KEGG_REACTION:R03025"],"synonyms":[{"name":"8-hydroxy-5-deazaflavin-reducing hydrogenase activity","type":"related"},{"name":"F420-reducing hydrogenase activity","type":"related"},{"name":"coenzyme F420-dependent hydrogenase activity","type":"related"},{"name":"hydrogen:coenzyme F420 oxidoreductase activity","type":"related"}],"termid":"GO:0050454"}


id: PBO:0077068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMPD3 antisense RNA 1","termid":"PBO:0077068"}


id: MONDO:1011586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary-dependent hyperadrenocorticism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"pituitary-dependent hyperadrenocorticism, non-human animal","termid":"MONDO:1011400"},{"relation_name":"is_a","term_name":"hyperadrenocorticism, domestic cat","termid":"MONDO:1011531"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary-dependent hyperadrenocorticism, domestic cat","secondary_identifiers":["OMIA:000247-9685"],"termid":"MONDO:1011586","xrefs":{"Monarch":{"xref_id":"1011586"}}}


id: PBO:0113407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; important regulator of substrate invagination from the vacuolar membrane; targeted to vacuole via AP-3 pathway; VTC3 has a paralog, VTC2, that arose from the whole genome duplication","termid":"PBO:0113407"}


id: GO:0032433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The end of a filopodium distal to the body of the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filopodium tip","termid":"GO:0032433"}


id: GO:1902711
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of GABA-A receptor activity. In human, it is usually composed of either two alpha, two beta and one gamma chain of the GABA-A receptor subunits or 5 chains of the GABA-A receptor subunits rho1-3 (formally known as GABA-C receptor).","definition_xrefs":["GOC:bhm","GO_REF:0000088","PMID:18790874","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor complex","termid":"GO:1902710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GABA-A receptor complex","termid":"GO:1902711"}


id: GO:0032818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation","termid":"GO:0032817"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte proliferation","termid":"GO:0050672"},{"relation_name":"negatively_regulates","term_name":"natural killer cell proliferation","termid":"GO:0001787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell proliferation","synonyms":[{"name":"down regulation of natural killer cell proliferation","type":"exact"},{"name":"down-regulation of natural killer cell proliferation","type":"exact"},{"name":"downregulation of natural killer cell proliferation","type":"exact"},{"name":"inhibition of natural killer cell proliferation","type":"narrow"},{"name":"negative regulation of NK cell proliferation","type":"exact"}],"termid":"GO:0032818"}


id: PR:Q9HDW0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDW0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P18G5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP18G5.03","synonyms":[{"name":"Spom972h-toc1","type":"exact"}],"termid":"PR:Q9HDW0"}


id: PBO:0080144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle amine transport 1 like","termid":"PBO:0080144"}


id: GO:0032162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septin band, i.e. a diffuse ring composed of a series of septin bars running parallel to the long axis of the cell, located at the neck of a shmoo (mating projection).","definition_xrefs":["PMID:16151244","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin band","termid":"GO:0032158"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection septin band","termid":"GO:0032162"}


id: GO:0006493
data:
  {"annotated_genes":["SJAG_03150","SJAG_04095","SJAG_00598","SJAG_01491","SJAG_01021","SJAG_03149","SJAG_01264","SJAG_04316","SJAG_04053","SJAG_04906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62649,74502,77336,79166,110503,110509,117861],"is_not":false,"summary":null,"term":"GO:0006493"},{"annotations":[105763,92793,101330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or via the phenol group of peptidyl-tyrosine, forming an O-glycan.","definition_xrefs":["GOC:pr","ISBN:0879695595","PMID:33775405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01491":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_04053":null,"SJAG_04095":null,"SJAG_04316":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein O-linked glycosylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5173105","RESID:AA0154","RESID:AA0155","RESID:AA0153","RESID:AA0157","RESID:AA0212"],"synonyms":[{"name":"protein amino acid O-linked glycosylation","type":"exact"}],"termid":"GO:0006493","terms_by_termid":{"GO:0006493":null,"GO:0035269":null}}


id: MONDO:0859191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biliary, renal, neurologic, and skeletal syndrome","secondary_identifiers":["UMLS:C5561990","OMIM:619534","MEDGEN:1794200"],"termid":"MONDO:0859191","xrefs":{"Monarch":{"xref_id":"0859191"}}}


id: GO:0005365
data:
  {"annotated_genes":["SJAG_03595","SJAG_04506"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71789,72616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of myo-inositol from one side of a membrane to the other. Myo-inositol is 1,2,3,4,5/4,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"myo-inositol transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"vitamin Bh transporter activity","type":"exact"}],"termid":"GO:0005365","terms_by_termid":{"GO:0005366":null}}


id: MONDO:1010894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the CLN8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN8, dog","secondary_identifiers":["OMIA:001506-9615"],"synonyms":[{"name":"CLN8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 8, dog","type":"related"}],"termid":"MONDO:1010894","xrefs":{"Monarch":{"xref_id":"1010894"}}}


id: GO:0016819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid anhydride which contains a sulfonyl group, -SO2-.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides","termid":"GO:0016817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides","secondary_identifiers":["EC:3.6.2.-"],"synonyms":[{"name":"hydrolase activity, acting on acid anhydrides, in sulphonyl-containing anhydrides","type":"exact"}],"termid":"GO:0016819"}


id: MONDO:0014077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cobblestone lissencephaly without muscular or ocular involvement is a form of cobblestone lissencephaly characterized by a constellation of brain malformations which can either exist alone or in conjunction with minimal muscular and ocular abnormalities. The clinical features of the disease include severe developmental delay, increased head circumference, hydrocephalus and seizures.","definition_xrefs":["Orphanet:352682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobblestone lissencephaly","termid":"MONDO:0018869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cobblestone lissencephaly without muscular or ocular involvement","secondary_identifiers":["DOID:0112230","GARD:17526","MEDGEN:767571","OMIM:615191","UMLS:C3554657"],"synonyms":[{"name":"LIS5","type":"related"},{"name":"cobblestone lissencephaly without muscular or eye involvement","type":"exact"},{"name":"cobblestone lissencephaly without muscular or ocular involvement","type":"exact"},{"name":"lissencephaly 5","type":"related"},{"name":"lissencephaly type 2 without muscular or eye involvement","type":"exact"},{"name":"lissencephaly type 2 without muscular or ocular involvement","type":"exact"},{"name":"lissencephaly type 5","type":"exact"}],"termid":"MONDO:0014077","xrefs":{"Monarch":{"xref_id":"0014077"}}}


id: MONDO:0019224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An inherited metabolic disease that is has its basis in the disruption of gamma-aminobutyric acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"gene_count":0,"genotype_count":0,"name":"obsolete inborn disorder of gamma-aminobutyric acid metabolism (obsolete MONDO:0019224)","synonyms":[{"name":"disorder of GABA metabolism","type":"exact"},{"name":"disorder of gamma-aminobutyric acid metabolism","type":"related"},{"name":"inborn error of gamma-aminobutyric acid metabolic process","type":"exact"},{"name":"inborn gamma-aminobutyric acid metabolic process disorder","type":"exact"},{"name":"rare inborn error of gamma-aminobutyric acid metabolic process","type":"exact"}],"termid":"MONDO:0019224","xrefs":{"Monarch":{"xref_id":"0019224"}}}


id: PBO:0050442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein R","termid":"PBO:0050442"}


id: PBO:0065746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase 1","termid":"PBO:0065746"}


id: PBO:0045964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia inducible factor 3","termid":"PBO:0045964"}


id: PBO:0036507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase Kcs1 (predicted)","termid":"PBO:0036507"}


id: PBO:0064460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 1, catalytic subunit","termid":"PBO:0064460"}


id: PBO:0072162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 39","termid":"PBO:0072162"}


id: MONDO:0008437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ATL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 3A","secondary_identifiers":["MEDGEN:419393","UMLS:C2931355","NCIT:C142893","DOID:0110791","OMIM:182600","GARD:5041","MESH:C536864","Orphanet:100984"],"synonyms":[{"name":"ATL1 hereditary spastic paraplegia","type":"exact"},{"name":"FSP1","type":"exact"},{"name":"SPG3A","type":"exact"},{"name":"Spg3","type":"related"},{"name":"Strumpell disease","type":"related"},{"name":"Strümpell disease","type":"exact"},{"name":"autosomal dominant familial spastic paraplegia 1","type":"exact"},{"name":"autosomal dominant spastic paraplegia 3","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 3","type":"exact"},{"name":"familial spastic paraplegia, autosomal dominant, 1","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in ATL1","type":"exact"},{"name":"hereditary spastic paraplegia type 3A","type":"exact"},{"name":"spastic Paraplegia 3A","type":"exact"},{"name":"spastic paraplegia 3","type":"related"},{"name":"spastic paraplegia 3, autosomal dominant","type":"related"},{"name":"spastic paraplegia 3a, autosomal dominant","type":"exact"},{"name":"strumpell disease","type":"exact"}],"termid":"MONDO:0008437","xrefs":{"Monarch":{"xref_id":"0008437"}}}


id: MONDO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split-hand/foot malformation with long bone deficiency (obsolete MONDO:0000174)","termid":"MONDO:0000174","xrefs":{"Monarch":{"xref_id":"0000174"}}}


id: GO:0060668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of salivary gland branching as a result of the transfer of information from the extracellular matrix to the epithelium of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"is_a","term_name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling","synonyms":[{"name":"regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signalling","type":"exact"}],"termid":"GO:0060668"}


id: PBO:0066898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 198","termid":"PBO:0066898"}


id: GO:0006421
data:
  {"annotated_genes":["SJAG_04856","SJAG_02517"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102057,104870],"is_not":false,"summary":null,"term":"GO:0006421"}]},"cv_name":"biological_process","definition":"The process of coupling asparagine to asparaginyl-tRNA, catalyzed by asparaginyl-tRNA synthetase. The asparaginyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an asparagine-accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02517":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"asparaginyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006421","terms_by_termid":{"GO:0006421":null}}


id: MOD:00719
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that oxygenates an L-methionine residue to one of the diastereomeric L-methionine sulfoxide residues.","definition_xrefs":["RESID:AA0581","OMSSA:1","DeltaMass:177","PubMed:21406390","PubMed:22116028","Unimod:35#M"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-methionine","termid":"MOD:00709"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine sulfoxide","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"L-methionine S-oxide","type":"exact"},{"name":"L-methionine sulfoxide","type":"exact"},{"name":"MOD_RES Methionine sulfoxide","type":"exact"},{"name":"MetO","type":"exact"},{"name":"Methionyl Sulfoxide","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"oxym","type":"exact"}],"termid":"MOD:00719"}


id: PBO:0075502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and centriole associated 1 like","termid":"PBO:0075502"}


id: MOD:00138
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 2-oxobutanoic acid.","definition_xrefs":["ChEBI:149508","PubMed:1680314","PubMed:2253617","RESID:AA0129","PubMed:2764678","PubMed:15023056","Unimod:385#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxobutanoic acid","synonyms":[{"name":"2-ketobutyric acid","type":"exact"},{"name":"2-oxobutanoic acid","type":"exact"},{"name":"2-oxobutyric acid","type":"exact"},{"name":"Ammonia-loss","type":"related"},{"name":"Loss of ammonia","type":"related"},{"name":"MOD_RES 2-oxobutanoic acid","type":"exact"}],"termid":"MOD:00138"}


id: PBO:0082255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules; expressed at lower level than Tub1p; TUB3 has a paralog, TUB1, that arose from the whole genome duplication","termid":"PBO:0082255"}


id: GO:0098786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the disassembly of a biofilm matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix disassembly","termid":"GO:0022617"},{"relation_name":"is_a","term_name":"biofilm matrix organization","termid":"GO:0098784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm matrix disassembly","termid":"GO:0098786"}


id: PBO:0110070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex ATP-dependent RNA helicase Rqt2, human ASCC3 ortholog","termid":"PBO:0110070"}


id: MONDO:0003664
data:
  {"annotated_genes":["SJAG_04334","SJAG_01162","SJAG_05283","SJAG_02539","SJAG_02009","SJAG_00846","SJAG_04192","SJAG_03153","SJAG_00930","SJAG_04881","SJAG_03497","SJAG_04731","SJAG_04495","SJAG_00605","SJAG_00839","SJAG_01183","SJAG_01077","SJAG_02796","SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[85211,85212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[85255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[86148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008494"},{"annotations":[85216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[85057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012204"},{"annotations":[85435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[86823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[85939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[87084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859172"},{"annotations":[85226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012981"},{"annotations":[86222,86221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[86160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008493"},{"annotations":[85205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"},{"annotations":[86663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[85717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"},{"annotations":[85356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[84957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012700"},{"annotations":[86952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019107"},{"annotations":[85397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008165"},{"annotations":[85548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Anemia resulting from the premature destruction of the peripheral blood red cells. It may be congenital or it may be caused by infections, medications, or malignancies.","definition_xrefs":["NCIT:C34376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normocytic anemia","termid":"MONDO:0004139"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_00846":null,"SJAG_00930":null,"SJAG_01077":null,"SJAG_01162":null,"SJAG_01183":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02539":null,"SJAG_02796":null,"SJAG_03153":null,"SJAG_03497":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04731":null,"SJAG_04881":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0002878","MEDGEN:1916","ICD10CM:D55-D59","MESH:D000743","NANDO:2200636","DOID:583","SCTID:61261009"],"synonyms":[{"name":"anaemia hemolytic","type":"exact"},{"name":"anemia hemolytic","type":"exact"},{"name":"anemia, hemolytic","type":"exact"},{"name":"hemolytic anemia","type":"exact"}],"termid":"MONDO:0003664","terms_by_termid":{"MONDO:0007109":null,"MONDO:0008165":null,"MONDO:0008493":null,"MONDO:0008494":null,"MONDO:0009113":null,"MONDO:0009134":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010438":null,"MONDO:0010480":null,"MONDO:0012204":null,"MONDO:0012700":null,"MONDO:0012981":null,"MONDO:0012992":null,"MONDO:0013275":null,"MONDO:0014166":null,"MONDO:0014221":null,"MONDO:0019107":null,"MONDO:0019531":null,"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0003664"}}}


id: FYPO_EXT:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"small fraction of cells (penetrance) or weak phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low","termid":"FYPO_EXT:0000003"}


id: PBO:0028255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ornithine_carbamoyltransferase_activity","termid":"PBO:0028255"}


id: GO:0009692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene metabolic process","synonyms":[{"name":"ethene metabolic process","type":"exact"},{"name":"ethene metabolism","type":"exact"},{"name":"ethylene metabolism","type":"exact"}],"termid":"GO:0009692"}


id: MONDO:0014332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"},{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"hyperammonemic encephalopathy due to carbonic anhydrase VA deficiency","secondary_identifiers":["OMIM:615751","Orphanet:401948","UMLS:C3810404","GARD:13201","SCTID:764456001","MEDGEN:816734"],"synonyms":[{"name":"CA-VA deficiency","type":"exact"},{"name":"CA5AD","type":"related"},{"name":"carbonic anhydrase 5A deficiency, hyperammonemia due to","type":"related"},{"name":"carbonic anhydrase VA deficiency","type":"related"},{"name":"carbonic anhydrase VA deficiency, hyperammonemia due to","type":"related"},{"name":"hyperammonemia due to carbonic anhydrase VA deficiency","type":"related"},{"name":"hyperammonemic encephalopathy due to carbonic anhydrase VA deficiency","type":"exact"},{"name":"mitochondrial carbonic anhydrase va deficiency","type":"related"}],"termid":"MONDO:0014332","xrefs":{"Monarch":{"xref_id":"0014332"}}}


id: PBO:0014232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0014232"}


id: PBO:0004301
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae COQ8","termid":"PBO:0004301"}


id: PBO:0069413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 674, pseudogene","termid":"PBO:0069413"}


id: PBO:0116634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 6","termid":"PBO:0116634"}


id: GO:0006809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide biosynthetic process","synonyms":[{"name":"nitric oxide anabolism","type":"exact"},{"name":"nitric oxide biosynthesis","type":"exact"},{"name":"nitric oxide formation","type":"exact"},{"name":"nitric oxide synthesis","type":"exact"}],"termid":"GO:0006809"}


id: PBO:0029206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_hygromycin_B","termid":"PBO:0029206"}


id: PBO:0040609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromo adjacent homology domain containing 1","termid":"PBO:0040609"}


id: PBO:0084698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial flavin adenine dinucleotide transporter; FAD is a synthesis product of riboflavin; human homolog SLC25A32 is implicated in multiple acyl-CoA dehydrogenase deficiency (MADD) or glutaric aciduria type II (GAII), and can complement yeast null mutant","termid":"PBO:0084698"}


id: MONDO:0006031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of sinusitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic rhinosinusitis","secondary_identifiers":["ICD9:473.8","NCIT:C35151","UMLS:C0149516","MEDGEN:101751","ICD9:473.9","PMID:25838086","icd11.foundation:1836987572","EFO:1000024","SCTID:40055000"],"synonyms":[{"name":"chronic sinusitis","type":"exact"},{"name":"sinusitis, chronic","type":"exact"}],"termid":"MONDO:0006031","xrefs":{"Monarch":{"xref_id":"0006031"}}}


id: PBO:0090393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD finger protein Cph1","termid":"PBO:0090393"}


id: FYPO:0005166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the spatio-temporal pattern of localization of replication forks into nuclear foci is normal (i.e. indistinguishable from wild type). Normally, replication forks appear organized into foci outside the nucleolus in early S phase. As S phase progresses, the number of foci first increases, then decreases, and the remaining foci concentrate within the nucleolus or at the nucleolar periphery. The last replication foci remaining at the end of S phase are one or two large spots at the nucleolar border.","definition_xrefs":["PomBase:mah","PMID:17304223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal spatio-temporal regulation of replication fork localization","synonyms":[{"name":"normal replication foci dynamics","type":"related"},{"name":"normal replication focus organization","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localisation","type":"exact"},{"name":"normal spatio-temporal regulation of replication fork localization during mitotic cell cycle","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localization during vegetative growth","type":"exact"},{"name":"normal spatio-temporal replication fork organization","type":"related"}],"termid":"FYPO:0005166"}


id: MONDO:0014805
data:
  {"annotated_genes":["SJAG_03686","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85561,85562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958071"}]},"cv_name":"mondo","definition":"A rare genetic intellectual disability syndrome characterized by global developmental delay, intellectual disability, severe speech delay, behavioral abnormalities (including impulsivity, compulsivity, stubbornness, manipulative behaviors, temper tantrums, and aggressive behaviors), autism spectrum disorder and mild and variable dysmorphic facies (including deep-set eyes and a prominent nasal septum, extending below the alae nasi) due to point mutation of USP7 gene or 16p13.2 microdeletion where USP7 is completely or partially deleted. Behavioral abnormalities are more pronounced in microdeletion. Patients may also have hypotonia, feeding problems, delayed walking with unsteady gait, hypogonadism in males, seizures and ocular anomalies (such as myopia, estropia, strabismus, and nystagmus).","definition_xrefs":["Orphanet:643549"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hao-Fountain syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1719035","UMLS:C5393908","NORD:1917"],"synonyms":[{"name":"HAFOUS","type":"exact"},{"name":"USP7-Related Diseases","type":"exact"}],"termid":"MONDO:0014805","terms_by_termid":{"MONDO:0958071":null},"xrefs":{"Monarch":{"xref_id":"0014805"}}}


id: GO:0097535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphoid lineage cell (also called a lymphoid lineage restricted progenitor cell) into the thymus. Lymphoid lineage cells enter and exit the thymus several times as part of this process.","definition_xrefs":["PMID:22342843","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid lineage cell migration","termid":"GO:0097534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration into thymus","synonyms":[{"name":"lymphoid lineage restricted progenitor cell migration into thymus","type":"exact"}],"termid":"GO:0097535"}


id: FYPO:0007931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to egtazic acid. Cells stop growing (and may die) at a concentration of egtazic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to egtazic acid","termid":"FYPO:0007931"}


id: GO:0019820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P2 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content; they are the least dense of the subforms observed.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"P2 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019820"}


id: PBO:0083055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diadenosine and diphosphoinositol polyphosphate phosphatase; hydrolyzes diphosphorylated inositol polyphosphates and diadenosine polyphosphates; high specificity for diadenosine hexa- and pentaphosphates; contains endopolyphosphatase activity with a high affinity for polyphosphates, an activity also observed for its human DIPP homologs; possesses mRNA decapping activity; nudix hydrolase family member; protein abundance increases in response to DNA replication stress","termid":"PBO:0083055"}


id: GO:0031712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a B1 bradykinin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bradykinin receptor binding","termid":"GO:0031711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"B1 bradykinin receptor binding","synonyms":[{"name":"B1 bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031712"}


id: PBO:0053792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1046","termid":"PBO:0053792"}


id: PBO:0108557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Esf1","termid":"PBO:0108557"}


id: MONDO:0015381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cysts and fistulae of the face and oral cavity that involves the labial commissure.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"commissural lip fistula","secondary_identifiers":["icd11.foundation:27017896","GARD:19939","UMLS:C5680634","MEDGEN:1809431","Orphanet:141061"],"synonyms":[{"name":"cysts and fistulae of the face and oral cavity of labial commissure","type":"exact"},{"name":"labial commissure cysts and fistulae of the face and oral cavity","type":"exact"}],"termid":"MONDO:0015381","xrefs":{"Monarch":{"xref_id":"0015381"}}}


id: PBO:0084301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Involved in SRP-independent protein targeting to the ER; component of an alternative ER-targeting pathway partially redundant with the GET pathway that can compensate for SRP loss; preference for substrates with downstream transmembrane domains; interacts with Snd1p, Env10p/Snd2p, and Sec61p-translocon subunits; role in establishing nucleus-vacuole junctions (NVJs) in high glucose; targeted to the NVJ during glucose starvation to facilitate expansion; role in phosphate transport with Pho86p","termid":"PBO:0084301"}


id: PBO:0112835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved nucleolar protein, human CCDC137 ortholog, implicated in rDNA metabolism or ribosome biogenesis","termid":"PBO:0112835"}


id: FYPO:0006512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere morphology","termid":"FYPO:0006512"}


id: SO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in no overhangs.","definition_xrefs":["SO:ke","SBOL:jgquinn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_recognition_site","termid":"SO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"blunt end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001691"}


id: PBO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit 3","termid":"PBO:0005633"}


id: GO:0033578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:mah","PMID:12042244","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete protein glycosylation in Golgi (obsolete GO:0033578)","synonyms":[{"name":"protein amino acid glycosylation in Golgi","type":"exact"},{"name":"terminal glycosylation","type":"narrow"}],"termid":"GO:0033578"}


id: MONDO:0005140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm originating from the surface ovarian epithelium. It accounts for the greatest number of deaths from malignancies of the female genital tract and is the fifth leading cause of cancer fatalities in women. It is predominantly a disease of older white women of northern European extraction, but it is seen in all ages and ethnic groups. Adenocarcinomas constitute the vast majority of ovarian carcinomas. The pattern of metastatic spread in ovarian carcinoma is similar regardless of the microscopic type. The most common sites of involvement are the contralateral ovary, peritoneal cavity, para-aortic and pelvic lymph nodes, and liver. Lung and pleura are the most common sites of extra-abdominal spread. The primary form of therapy is surgical. The overall prognosis of ovarian carcinoma remains poor, a direct result of its rapid growth rate and the lack of early symptoms. --2002","definition_xrefs":["NCIT:C4908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian carcinoma","secondary_identifiers":["UMLS:C4721610","DOID:4001","EFO:0001075","MEDGEN:1648335"],"synonyms":[{"name":"carcinoma of ovary","type":"exact"},{"name":"carcinoma of the ovary","type":"exact"},{"name":"epithelial ovarian cancer","type":"exact"},{"name":"ovarian cancer","type":"broad"},{"name":"ovarian carcinoma","type":"exact"},{"name":"ovarian epithelial cancer","type":"broad"},{"name":"ovary carcinoma","type":"exact"}],"termid":"MONDO:0005140","xrefs":{"Monarch":{"xref_id":"0005140"}}}


id: PBO:0080429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 13","termid":"PBO:0080429"}


id: GO:0046471
data:
  {"annotated_genes":["SJAG_04323","SJAG_03700","SJAG_03563","SJAG_00168","SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035965"},{"annotations":[79861,70970,92798,117662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylglycerols, any of a class of phospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol. They are important constituents of cell membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylglycerol metabolism","type":"exact"}],"termid":"GO:0046471","terms_by_termid":{"GO:0032049":null,"GO:0035965":null}}


id: GO:0048386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinoic acid receptor signaling pathway","termid":"GO:0048385"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"activation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"positive regulation of RAR signaling pathway","type":"exact"},{"name":"positive regulation of retinoic acid receptor signalling pathway","type":"exact"},{"name":"stimulation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"up regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"up-regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"upregulation of retinoic acid receptor signaling pathway","type":"exact"}],"termid":"GO:0048386"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: PBO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding","termid":"PBO:0031561"}


id: MONDO:1011659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric dilatation volvulus syndrome, non-human animal","secondary_identifiers":["OMIA:000404"],"termid":"MONDO:1011659","xrefs":{"Monarch":{"xref_id":"1011659"}}}


id: FYPO:0002590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any tRNA processing intermediates with 3' extensions measured in the mitochondria is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions","synonyms":[{"name":"increased accumulation of mitochondrial tRNA processing intermediates with 3' extensions","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during vegetative growth","type":"exact"}],"termid":"FYPO:0002590"}


id: PBO:0050887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iduronate 2-sulfatase pseudogene 1","termid":"PBO:0050887"}


id: PBO:0054901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2315","termid":"PBO:0054901"}


id: GO:0042338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a collagen and cuticulin-based noncellular, hardened, or membranous secretion from an epithelial sheet, occurring as part of the molting cycle. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen and cuticulin-based cuticle development","termid":"GO:0040002"},{"relation_name":"part_of","term_name":"molting cycle, collagen and cuticulin-based cuticle","termid":"GO:0018996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle development involved in collagen and cuticulin-based cuticle molting cycle","synonyms":[{"name":"collagen and cuticulin-based cuticle development during molting","type":"related"},{"name":"cuticle anabolism during molting","type":"broad"},{"name":"cuticle biosynthetic process during molting","type":"broad"},{"name":"cuticle formation during molting","type":"broad"},{"name":"cuticle synthesis during molting","type":"broad"}],"termid":"GO:0042338"}


id: GO:0006210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"thymine metabolic process","termid":"GO:0019859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"thymine catabolic process","synonyms":[{"name":"thymine breakdown","type":"exact"},{"name":"thymine catabolism","type":"exact"},{"name":"thymine degradation","type":"exact"}],"termid":"GO:0006210"}


id: PBO:0064056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 90","termid":"PBO:0064056"}


id: GO:0072378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of the cascade of enzymatic reactions initiated by physical damage to the wall of a blood vessel, leading to the formation of a formation of a fibrin clot at the site of the injury. The process also includes numerous positive and negative regulatory events.","definition_xrefs":["GOC:pde","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}


id: PBO:0028897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_pear-shaped_vegetative_cell","termid":"PBO:0028897"}


id: PBO:0029202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_micafungin","termid":"PBO:0029202"}


id: PBO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds DRE 5'-NG[GT]T[G/A]-3'","termid":"PBO:0002103"}


id: PR:Q9P3E4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3E4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein SPAC750.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.07c","synonyms":[{"name":"Spom972h-SPAC750.07c","type":"exact"}],"termid":"PR:Q9P3E4"}


id: PBO:0036127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_movement_within_plasma_membrane","termid":"PBO:0036127"}


id: PBO:0003337
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.36","termid":"PBO:0003337"}


id: PBO:0031323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_latrunculin_A","termid":"PBO:0031323"}


id: GO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the apoptotic cell by phagocytosis, by a neighboring cell or by a phagocyte.","definition_xrefs":["GOC:rk","PMID:15536015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis, engulfment","termid":"GO:0006911"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"engulfment of apoptotic cell","synonyms":[{"name":"engulfment of apoptotic cell corpse","type":"exact"},{"name":"engulfment of cell corpse","type":"exact"}],"termid":"GO:0043652"}


id: MONDO:0019428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare X-linked syndrome characterized by psychomotor delay, intellectual deficit, hydrocephalus, and mild facial anomalies.","definition_xrefs":["Orphanet:85335"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fried syndrome","secondary_identifiers":["SCTID:718848000","MEDGEN:930803","UMLS:C4305134","GARD:16753"],"termid":"MONDO:0019428","xrefs":{"Monarch":{"xref_id":"0019428"}}}


id: PBO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1 domain","termid":"PBO:0001518"}


id: PBO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionine-tRNA ligase (predicted)","termid":"PBO:0002322"}


id: PBO:0005883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine, mitochondrial","termid":"PBO:0005883"}


id: GO:0071749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two, three, or four monomeric IgA immunoglobulin complexes linked through both direct disulfide bonds and through disulfide binded monomers of J chain acting as a bridge. Each IgA monomer consists of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds. Dimeric IgA is sometimes complexed additionally with secretory component, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["PMID:16362985","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgA immunoglobulin complex, circulating","termid":"GO:0071746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"polymeric IgA immunoglobulin complex","synonyms":[{"name":"pIgA antibody","type":"exact"},{"name":"pIgA1 antibody","type":"narrow"},{"name":"polymeric IgA antibody","type":"exact"},{"name":"polymeric IgA1 antibody","type":"narrow"}],"termid":"GO:0071749"}


id: MONDO:0020408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complete atrioventricular canal","termid":"MONDO:0015273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"complete atrioventricular canal-tetralogy of fallot syndrome","secondary_identifiers":["GARD:16894","Orphanet:99068","UMLS:C3640086","MEDGEN:768726"],"synonyms":[{"name":"CAVC type C","type":"exact"},{"name":"CAVC-Fallot tetralogy syndrome","type":"exact"},{"name":"complete atrioventricular canal type C","type":"exact"}],"termid":"MONDO:0020408","xrefs":{"Monarch":{"xref_id":"0020408"}}}


id: PBO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9 (predicted)","termid":"PBO:0003886"}


id: GO:0045587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell differentiation","termid":"GO:0045586"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell differentiation","synonyms":[{"name":"down regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"down-regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"downregulation of gamma-delta T cell differentiation","type":"exact"},{"name":"inhibition of gamma-delta T cell differentiation","type":"narrow"},{"name":"negative regulation of gamma-delta T cell development","type":"related"},{"name":"negative regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"negative regulation of gamma-delta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045587"}


id: FYPO:0004949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to rapamycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to rapamycin","synonyms":[{"name":"increased protein phosphorylation during cellular response to rapamycin during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to rapamycin during vegetative growth","type":"exact"}],"termid":"FYPO:0004949"}


id: GO:0080091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving raffinose.","definition_xrefs":["PMID:19211694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"raffinose metabolic process","termid":"GO:0033530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of raffinose metabolic process","termid":"GO:0080091"}


id: GO:1900440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"}


id: SO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from chromoplast_sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_gene","synonyms":[{"name":"chromoplast gene","type":"exact"}],"termid":"SO:0000093"}


id: PBO:0048259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase 1","termid":"PBO:0048259"}


id: PBO:0036042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036042"}


id: FYPO:0003680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing epirubicin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on epirubicin","synonyms":[{"name":"normal cell population growth in presence of epirubicin","type":"exact"},{"name":"normal cell population growth on 4'-epidoxorubicin","type":"exact"},{"name":"normal cell population growth on epirubicin","type":"exact"},{"name":"normal cellular response to epirubicin","type":"related"},{"name":"normal vegetative cell population growth on epirubicin","type":"exact"}],"termid":"FYPO:0003680"}


id: GO:0006556
data:
  {"annotated_genes":["SJAG_03659"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74843],"is_not":false,"summary":null,"term":"GO:0006556"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"S-adenosylmethionine metabolic process","termid":"GO:0046500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"S-adenosylmethionine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SAM-PWY"],"synonyms":[{"name":"S-adenosyl methionine biosynthesis","type":"exact"},{"name":"S-adenosyl methionine biosynthetic process","type":"exact"},{"name":"S-adenosylmethionine anabolism","type":"exact"},{"name":"S-adenosylmethionine biosynthesis","type":"exact"},{"name":"S-adenosylmethionine formation","type":"exact"},{"name":"S-adenosylmethionine synthesis","type":"exact"},{"name":"SAM biosynthetic process","type":"exact"}],"termid":"GO:0006556","terms_by_termid":{"GO:0006556":null}}


id: PBO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 9","termid":"PBO:0071980"}


id: MONDO:0800111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent tachypnoe of infancy that presents with with no other airway or parenchymal abnormalities upon scanning (N=80; 63%).","definition_xrefs":["PMID:26474448","PMID:32761949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent tachypnoe of infancy","termid":"MONDO:0800109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent tachypnoe of infancy, usual","synonyms":[{"name":"PTI, usual","type":"exact"}],"termid":"MONDO:0800111","xrefs":{"Monarch":{"xref_id":"0800111"}}}


id: PBO:0063683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 7","termid":"PBO:0063683"}


id: GO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIID class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIID-class binding (obsolete GO:0001084)","synonyms":[{"name":"TFIID-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001084"}


id: PR:Q9C0U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0U7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein vps5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.01","synonyms":[{"name":"Spom972h-vps5","type":"exact"}],"termid":"PR:Q9C0U7"}


id: PBO:0059632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH2 pseudogene 4","termid":"PBO:0059632"}


id: PBO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Slu7","termid":"PBO:0004083"}


id: GO:0008396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-oxocholesterol + H+ + NADPH = 7alpha-hydroxycholesterol + NADP+.","definition_xrefs":["RHEA:68740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxysterol 7-alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-5602885","Reactome:R-HSA-191972","Reactome:R-HSA-192065","Reactome:R-HSA-192178"],"synonyms":[{"name":"cytochrome P450 CYP7B1","type":"narrow"}],"termid":"GO:0008396"}


id: PBO:0116607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3131","termid":"PBO:0116607"}


id: PBO:0027692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_indistinct_DNA","termid":"PBO:0027692"}


id: PBO:0004262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase (predicted)","termid":"PBO:0004262"}


id: PBO:0047532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGD5 antisense RNA 1","termid":"PBO:0047532"}


id: PR:O42922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16A3.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C16A3.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.17c","synonyms":[{"name":"Spom972h-SPBC16A3.17c","type":"exact"}],"termid":"PR:O42922"}


id: MONDO:0015831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mullerian aplasia","termid":"MONDO:0019128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral aplasia of the mullerian ducts","secondary_identifiers":["MEDGEN:78600","GARD:20173","Orphanet:180071","UMLS:C0266389"],"synonyms":[{"name":"unicornuate uterus","type":"exact"},{"name":"unilateral aplasia of the Müllerian ducts","type":"related"}],"termid":"MONDO:0015831","xrefs":{"Monarch":{"xref_id":"0015831"}}}


id: GO:0140539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of melanotic encapsulation of foreign target.","definition_xrefs":["PMID:15749104","PMID:18457993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of melanization defense response","termid":"GO:0035007"},{"relation_name":"regulates","term_name":"melanotic encapsulation of foreign target","termid":"GO:0035011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of melanotic encapsulation of foreign target","termid":"GO:0140539"}


id: CHEBI:76243
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrous ammonium sulfate (anhydrous)","termid":"CHEBI:76243"}


id: PBO:0068248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 5","termid":"PBO:0068248"}


id: MONDO:0011285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An age related macular degeneration associated with polymorphism in the hemicentin gene (HMCN1) on chromosome 1q25.3-q31.1.","definition_xrefs":["PMID:14570714","DOID:0110014","PMID:9715689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 1","secondary_identifiers":["UMLS:C1864205","MEDGEN:400475","OMIM:603075","MESH:C566411"],"synonyms":[{"name":"ARMD1","type":"exact"},{"name":"age related macular degeneration type 1","type":"exact"},{"name":"age related maculopathy 1","type":"exact"},{"name":"macular Degeneration, age-related, type 1","type":"exact"},{"name":"macular degeneration, age-related","type":"broad"},{"name":"macular degeneration, age-related, 1","type":"related"},{"name":"macular degeneration, age-related, reduced risk of","type":"exact"},{"name":"maculopathy, age-related, 1","type":"related"}],"termid":"MONDO:0011285","xrefs":{"Monarch":{"xref_id":"0011285"}}}


id: PBO:0038714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 9","termid":"PBO:0038714"}


id: GO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicle along axonal microtubules from the cell body to the presynapse.","definition_xrefs":["GOC:jid","GOC:lmg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"anterograde synaptic vesicle transport","synonyms":[{"name":"anterograde axonal transport of synaptic vesicle","type":"exact"}],"termid":"GO:0048490"}


id: PBO:0046587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 29","termid":"PBO:0046587"}


id: GO:1904674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell population maintenance.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","GOC:rph","GOC:BHF","GOC:TermGenie","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stem cell population maintenance","termid":"GO:1902459"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"},{"relation_name":"positively_regulates","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell population maintenance","synonyms":[{"name":"activation of somatic stem cell population maintenance","type":"narrow"},{"name":"up regulation of somatic stem cell population maintenance","type":"exact"},{"name":"up-regulation of somatic stem cell population maintenance","type":"exact"},{"name":"upregulation of somatic stem cell population maintenance","type":"exact"}],"termid":"GO:1904674"}


id: GO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"endocardial cushion formation","termid":"GO:0003272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in endocardial cushion formation","termid":"GO:0003273"}


id: GO:0072532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on triferuloyl spermidine or any of its mono- or di-(hydroxyferuloyl)-spermidine derivatives.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}


id: GO:0009153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide biosynthetic process","termid":"GO:0009265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleotide biosynthetic process","synonyms":[{"name":"purine deoxyribonucleotide anabolism","type":"exact"},{"name":"purine deoxyribonucleotide biosynthesis","type":"exact"},{"name":"purine deoxyribonucleotide formation","type":"exact"},{"name":"purine deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009153"}


id: PBO:0051741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 8","termid":"PBO:0051741"}


id: PBO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor eIF5A (predicted)","termid":"PBO:0002388"}


id: PBO:0070306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 12","termid":"PBO:0070306"}


id: MOD:01108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid, glutamtic acid anisole adduct.","definition_xrefs":["DeltaMass:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"anisyl modified residue","termid":"MOD:01007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid (Glu)","synonyms":[{"name":"anisole adducted glutamyl","type":"exact"}],"termid":"MOD:01108"}


id: GO:0106142
data:
  {"annotated_genes":["SJAG_03713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98189],"is_not":false,"summary":null,"term":"GO:0106142"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(645) in 25S rRNA = S-adenosyl-L-homocysteine + N(1)-methyladenine(645) in 25S rRNA.","definition_xrefs":["EC:2.1.1.287","PMID:23180764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"rRNA (adenine-N1-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:43792"],"synonyms":[{"name":"25S rRNA (adenine(645)-N(1))-methyltransferase","type":"related"},{"name":"25S rRNA m(1)A(645) methyltransferase","type":"related"}],"termid":"GO:0106142","terms_by_termid":{"GO:0106142":null}}


id: MONDO:0022094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cartwright Nelson Fryns syndrome","secondary_identifiers":["MESH:C535917","MEDGEN:443968","UMLS:C2931062"],"synonyms":[{"name":"Growth retardation, severe intellectual disability, acral limb deficiencies with poorly keratinized nails","type":"related"},{"name":"Growth retardation, severe mental retardation, acral limb deficiencies with poorly keratinized nails","type":"related"}],"termid":"MONDO:0022094","xrefs":{"Monarch":{"xref_id":"0022094"}}}


id: PBO:0001640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39 (predicted)","termid":"PBO:0001640"}


id: PBO:0024839
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SUV3","termid":"PBO:0024839"}


id: PBO:0046292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 2","termid":"PBO:0046292"}


id: PBO:0065454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 2","termid":"PBO:0065454"}


id: GO:0141058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone demethylase activity","termid":"GO:0032452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0032452","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H4 demethylase activity","termid":"GO:0141058"}


id: MONDO:0030977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 7","secondary_identifiers":["MEDGEN:1786836","DOID:0081426","GARD:18444","OMIM:619216","UMLS:C5543119"],"synonyms":[{"name":"HMNMYO","type":"exact"},{"name":"neuropathy, hereditary motor, with myopathic features","type":"exact"}],"termid":"MONDO:0030977","xrefs":{"Monarch":{"xref_id":"0030977"}}}


id: PR:P34068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P34068","PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm1","termid":"PR:000025003"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.05","synonyms":[{"name":"Spom972h-mfm1","type":"exact"}],"termid":"PR:P34068"}


id: PBO:0042786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 135","termid":"PBO:0042786"}


id: GO:0004457
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004458"},{"annotations":[80102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: lactate + NAD+ = H+ + NADH + pyruvate.","definition_xrefs":["GOC:ai","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lactate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004457","terms_by_termid":{"GO:0004458":null,"GO:0008720":null}}


id: MONDO:0016249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ovarian cancer caused by germline mutations in various genes, usually associated with additional cancer risks. The most common are breast and ovarian cancer syndrome (HBOC) due to mutations in BRCA1 and BRCA2 genes and hereditary nonpolyposis colorectal cancer (HNPCC) due to mutations in DNA mismatch-repair genes. Mutations in STK11 gene, causing Peutz-Jeghers syndrome, are also associated with a risk of ovarian cancer (typically sex cord stromal tumors). Mutations in other genes, including RAD51C, RAD51D, PALB2, confer an elevated ovarian cancer risk in a minority of patients.","definition_xrefs":["Orphanet:213524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial ovarian cancer","termid":"MONDO:0016248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hereditary site-specific ovarian cancer syndrome","secondary_identifiers":["UMLS:C4749652","MEDGEN:1650574","GARD:20468","icd11.foundation:123305976"],"termid":"MONDO:0016249","xrefs":{"Monarch":{"xref_id":"0016249"}}}


id: PBO:0090888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-3 peroxisome-plasma membrane adaptor Pex3","termid":"PBO:0090888"}


id: PR:O59797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein C364.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.06","synonyms":[{"name":"Spom972h-nap1","type":"exact"}],"termid":"PR:O59797"}


id: PBO:0080271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 34 pseudogene","termid":"PBO:0080271"}


id: PBO:0025542
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair-deficiency disorder","termid":"PBO:0025542"}


id: MONDO:0017348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoepithelial-like carcinoma is a rare, malignant epithelial tumor, composed of undifferentiated epithelial cells with dense lymphoid stroma, mimicking lymphoepithelioma. It often shows association with Epstein-Barr virus infection and can develop in various organs, such as the nasopharynx, stomach, skin, breast and lungs, among others. The presenting symptoms, as well as the radiologic features, are usually nonspecific and depend on the affected site and organ.","definition_xrefs":["Orphanet:289682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated carcinoma","termid":"MONDO:0017344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoepithelial-like carcinoma","secondary_identifiers":["GARD:21151"],"termid":"MONDO:0017348","xrefs":{"Monarch":{"xref_id":"0017348"}}}


id: PBO:0046664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor 2","termid":"PBO:0046664"}


id: GO:0102198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-idonate + NAD+ = 5-dehydro-D-gluconate + NADH + H+.","definition_xrefs":["GOC:pz","RHEA:21172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-idonate 5-dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.366","MetaCyc:RXN-12107"],"synonyms":[{"name":"L-idonate 5-dehydrogenase activity (NAD-dependent)","type":"exact"}],"termid":"GO:0102198"}


id: PBO:0045243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C22","termid":"PBO:0045243"}


id: MONDO:0012852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 10q23-q24.","definition_xrefs":["PMID:10053016","DOID:0110898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 20","secondary_identifiers":["OMIM:612288","UMLS:C2676781","MEDGEN:394126","MESH:C567361"],"synonyms":[{"name":"IBD20","type":"exact"},{"name":"inflammatory bowel disease 20","type":"exact"},{"name":"inflammatory bowel disease type 20","type":"exact"}],"termid":"MONDO:0012852","xrefs":{"Monarch":{"xref_id":"0012852"}}}


id: PBO:0003541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Nog1 (predicted)","termid":"PBO:0003541"}


id: GO:0009290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of DNA into a cell that contributes to the process of transformation, the uptake of foreign genetic material into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transport","termid":"GO:0051027"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"part_of","term_name":"DNA-mediated transformation","termid":"GO:0009294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"DNA import into cell involved in transformation","synonyms":[{"name":"DNA import into cell","type":"broad"},{"name":"DNA transport into cell during transformation","type":"related"},{"name":"cellular DNA import during transformation","type":"related"},{"name":"cellular DNA uptake","type":"broad"}],"termid":"GO:0009290"}


id: PBO:0089892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sugar transporter family","termid":"PBO:0089892"}


id: GO:1900993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (-)-secologanin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00328","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin catabolic process (obsolete GO:1900993)","synonyms":[{"name":"(-)-secologanin breakdown","type":"exact"},{"name":"(-)-secologanin catabolism","type":"exact"},{"name":"(-)-secologanin degradation","type":"exact"}],"termid":"GO:1900993"}


id: PBO:0089943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg2","termid":"PBO:0089943"}


id: PBO:0110342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4B (Chido/Rodgers blood group), copy 2","termid":"PBO:0110342"}


id: PBO:0062418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 55 pseudogene","termid":"PBO:0062418"}


id: MONDO:0011256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emphysema, congenital, with deafness, penoscrotal web, and intellectual disability","secondary_identifiers":["UMLS:C1865180","MEDGEN:355926","MESH:C566519","OMIM:602564"],"synonyms":[{"name":"emphysema, congenital, with deafness, penoscrotal web, and intellectual disability","type":"exact"},{"name":"emphysema, congenital, with deafness, penoscrotal web, and mental retardation","type":"exact"}],"termid":"MONDO:0011256","xrefs":{"Monarch":{"xref_id":"0011256"}}}


id: MONDO:0013123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the TLL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 6","secondary_identifiers":["DOID:0110111","UMLS:C2751315","MESH:C567764","MEDGEN:414348","OMIM:613087"],"synonyms":[{"name":"ASD6","type":"exact"},{"name":"TLL1 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in TLL1","type":"exact"},{"name":"atrial heart septal defect type 6","type":"exact"},{"name":"atrial septal defect 6","type":"exact"},{"name":"atrial septal defect type 6","type":"exact"}],"termid":"MONDO:0013123","xrefs":{"Monarch":{"xref_id":"0013123"}}}


id: MONDO:0005091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral respiratory infection caused by the SARS coronavirus. It is transmitted through close person-to-person contact. It is manifested with high fever, headache, dry cough and myalgias. It may progress to pneumonia and cause death.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"Orthocoronavirinae infectious disease","termid":"MONDO:0020753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe acute respiratory syndrome","secondary_identifiers":["Orphanet:140896","SCTID:398447004","UMLS:C1175175","icd11.foundation:652944603","GARD:9237","MEDGEN:262817","MONDO:0015370","NCIT:C85064","MedDRA:10061982","MESH:D045169","EFO:0000694","ICD9:079.82","DOID:2945"],"synonyms":[{"name":"SARS","type":"exact"},{"name":"SARS coronavirus caused disease or disorder","type":"exact"},{"name":"SARS coronavirus disease or disorder","type":"exact"},{"name":"SARS coronavirus infectious disease","type":"exact"},{"name":"SARS-CoV infection","type":"exact"},{"name":"acute respiratory coronavirus infection","type":"exact"}],"termid":"MONDO:0005091","xrefs":{"Monarch":{"xref_id":"0005091"}}}


id: GO:0046473
data:
  {"annotated_genes":["SJAG_01957","SJAG_01519","SJAG_01036","SJAG_04323","SJAG_04319","SJAG_04883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71334,70672,92815,77400,62031,71060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_01519":null,"SJAG_01957":null,"SJAG_04319":null,"SJAG_04323":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidic acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidic acid metabolism","type":"exact"}],"termid":"GO:0046473","terms_by_termid":{"GO:0006654":null}}


id: GO:0030649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic catabolic process","synonyms":[{"name":"aminoglycoside antibiotic breakdown","type":"exact"},{"name":"aminoglycoside antibiotic catabolism","type":"exact"},{"name":"aminoglycoside antibiotic degradation","type":"exact"}],"termid":"GO:0030649"}


id: GO:0140432
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91456],"is_not":false,"summary":null,"term":"GO:0140432"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in 5'OH-RNA according to the reaction 5'OH-RNA + H20 = 5'OH-NpN (dinucleotide) + 5'P-RNA.","definition_xrefs":["PMID:31777937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0140098","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"5'-hydroxyl dinucleotide hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140432","terms_by_termid":{"GO:0140432":null}}


id: PBO:0090436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rmp1/NEPRO","termid":"PBO:0090436"}


id: GO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator).","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"translational initiation","termid":"GO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"formation of translation initiation ternary complex","synonyms":[{"name":"translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:0001677"}


id: PR:O94709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdx1 gene.","definition_xrefs":["UniProtKB:O94709","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein X component, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.09c","synonyms":[{"name":"Spom972h-pdx1","type":"exact"},{"name":"dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94709"}


id: PBO:0017899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-dimethylethanolamine N-methyltransferase","termid":"PBO:0017899"}


id: GO:2001308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["PMID:16333108","PMID:17574915","PMID:18272357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"mycotoxin metabolic process","termid":"GO:0043385"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"gliotoxin metabolic process","synonyms":[{"name":"gliotoxin metabolism","type":"exact"}],"termid":"GO:2001308"}


id: PBO:0056822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 13B (pseudogene)","termid":"PBO:0056822"}


id: GO:0008219
data:
  {"annotated_genes":["SJAG_01527","SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96314],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0012502"},{"annotations":[73622,79317],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538).","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","PMID:25236395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_01527":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell death","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"accidental cell death","type":"related"},{"name":"necrosis","type":"related"}],"termid":"GO:0008219","terms_by_termid":{"GO:0012502":null,"GO:0043065":null}}


id: GO:0050817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fluid solution, or part of it, changes into a solid or semisolid mass.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coagulation","synonyms":[{"name":"clotting","type":"exact"}],"termid":"GO:0050817"}


id: FYPO:0003110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of caffeine and rapamycin. Cells stop growing (and may die) at concentrations of caffeine and rapamycin that allow wild type cells to grow.","definition_xrefs":["PMID:23551936","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to caffeine and rapamycin","synonyms":[{"name":"hypersensitive to caffeine and rapamycin","type":"exact"},{"name":"sensitive to caffeine and rapamycin during mitotic cell cycle","type":"related"},{"name":"sensitive to caffeine and rapamycin during vegetative growth","type":"exact"},{"name":"sensitive to caffeine and rapamycin in combination","type":"exact"}],"termid":"FYPO:0003110"}


id: GO:0097131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D1 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D1-CDK6 complex","termid":"GO:0097131"}


id: FYPO:0004444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased, and the protein is instead present in the plasma membrane, during the second meiotic nuclear division.","definition_xrefs":["PMID:21832151","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane with protein mislocalized to plasma membrane during meiosis II","type":"related"},{"name":"reduced protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"}],"termid":"FYPO:0004444"}


id: PBO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F1-regulated inhibitor of cell death","termid":"PBO:0046504"}


id: PR:Q9URY8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chloride anion exchanger that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02282","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate permease C869.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.05c","secondary_identifiers":["UniProtKB:Q9URY8"],"synonyms":[{"name":"Spom972h-SLC26A3","type":"exact"}],"termid":"PR:Q9URY8"}


id: PBO:0004152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1-UNC-like protein involved protein folding in the ER (predicted)","termid":"PBO:0004152"}


id: PBO:0046492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ERG","termid":"PBO:0046492"}


id: GO:0034436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glycoprotein transport","termid":"GO:0034436"}


id: PBO:0090089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, expressed during meiotic cell cycle, possibly related to metazoan RAB11FIP4 family","termid":"PBO:0090089"}


id: GO:1901496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cysteine metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur amino acid metabolic process","termid":"GO:0031337"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"regulation of cysteine metabolic process","termid":"GO:1901494"},{"relation_name":"positively_regulates","term_name":"cysteine metabolic process","termid":"GO:0006534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of cysteine metabolic process","synonyms":[{"name":"activation of cysteine metabolic process","type":"narrow"},{"name":"activation of cysteine metabolism","type":"narrow"},{"name":"positive regulation of cysteine metabolism","type":"exact"},{"name":"up regulation of cysteine metabolic process","type":"exact"},{"name":"up regulation of cysteine metabolism","type":"exact"},{"name":"up-regulation of cysteine metabolic process","type":"exact"},{"name":"up-regulation of cysteine metabolism","type":"exact"},{"name":"upregulation of cysteine metabolic process","type":"exact"},{"name":"upregulation of cysteine metabolism","type":"exact"}],"termid":"GO:1901496"}


id: MONDO:0009655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme heparan sulfate sulfatase. It is characterized by behavioral changes, sleep disturbances, mental developmental delays and seizures.","definition_xrefs":["NCIT:C84897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 3","termid":"MONDO:0018937"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis type 3A","secondary_identifiers":["icd11.foundation:182200345","MEDGEN:39264","NANDO:2201174","DOID:0111395","OMIM:252900","GARD:7071","UMLS:C0086647","NANDO:1200101","Orphanet:79269","SCTID:41572006"],"synonyms":[{"name":"MPS 3A","type":"related"},{"name":"MPS III A","type":"exact"},{"name":"MPS IIIA","type":"related"},{"name":"MPS3A","type":"exact"},{"name":"MPSIIIA","type":"exact"},{"name":"Sanfilippo A","type":"exact"},{"name":"Sanfilippo syndrome a","type":"exact"},{"name":"Sanfilippo syndrome type A","type":"exact"},{"name":"heparan sulfamidase deficiency","type":"exact"},{"name":"heparan sulfate sulfatase deficiency","type":"related"},{"name":"heparan sulphate sulfatase deficiency","type":"related"},{"name":"heparane sulfamidase deficiency","type":"related"},{"name":"mucopoly-saccharidosis type 3A","type":"related"},{"name":"mucopolysaccharidosis type 3A","type":"exact"},{"name":"mucopolysaccharidosis type IIIA","type":"exact"},{"name":"mucopolysaccharidosis type IIIA (Sanfilippo A)","type":"exact"},{"name":"mucopolysaccharidosis, type 3A","type":"related"},{"name":"mucopolysaccharidosis, type IIIA","type":"related"},{"name":"sulfamidase deficiency","type":"related"}],"termid":"MONDO:0009655","xrefs":{"Monarch":{"xref_id":"0009655"}}}


id: GO:2000792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000790"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation involved in lung development","termid":"GO:0060916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000792"}


id: GO:0015960
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine polyphosphate, a derivative of the nucleoside adenosine with phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"diadenosine polyphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine polyphosphate anabolism","type":"exact"},{"name":"diadenosine polyphosphate biosynthesis","type":"exact"},{"name":"diadenosine polyphosphate formation","type":"exact"},{"name":"diadenosine polyphosphate synthesis","type":"exact"}],"termid":"GO:0015960","terms_by_termid":{"GO:0015966":null}}


id: MONDO:0850419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that is characterized by the expression of CD10, BCL-6, A-myb, and LMO2 genes, BCL-2 translocation, and c-REL amplification.","definition_xrefs":["DOID:0080997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"diffuse large B-cell lymphoma germinal center B-cell type","secondary_identifiers":["MEDGEN:234202","UMLS:C1333295"],"termid":"MONDO:0850419","xrefs":{"Monarch":{"xref_id":"0850419"}}}


id: MONDO:0008083
data:
  {"annotated_genes":["SJAG_03052","SJAG_02518"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86188,86189],"is_not":false,"summary":null,"term":"MONDO:0008083"}]},"cv_name":"mondo","definition":"A condition associated with mutation(s) in the DNAJC5 gene, encoding dnaJ homolog subfamily C member 5. The condition is one of a group of genetically heterogeneous neurodegenerative disorders, characterized by accumulation of intracellular lipopigments.","definition_xrefs":["NCIT:C128116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult neuronal ceroid lipofuscinosis","termid":"MONDO:0019260"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02518":null,"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0002561","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"ceroid lipofuscinosis, neuronal, 4 (Kufs type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1222","MEDGEN:320287","OMIM:162350","Orphanet:228343","UMLS:C1834207","DOID:0110720"],"synonyms":[{"name":"CLN4","type":"exact"},{"name":"CLN4B","type":"related"},{"name":"CLN4B disease","type":"exact"},{"name":"Kuf's disease type B","type":"related"},{"name":"Kuf's disease, autosomal dominant","type":"related"},{"name":"Kufs disease, autosomal dominant","type":"related"},{"name":"adult neuronal ceroid lipofuscinosis 4B","type":"related"},{"name":"autosomal dominant Kufs disease","type":"exact"},{"name":"autosomal dominant neuronal ceroid lipofuscinosis 4B","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4 (Kufs type)","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4 (Kufs type), autosomal dominant","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4B, autosomal dominant","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, parry type","type":"related"},{"name":"neuronal ceroid lipofuscinosis 4 parry type","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 4B","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 4B","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, parry type","type":"exact"}],"termid":"MONDO:0008083","terms_by_termid":{"MONDO:0008083":null},"xrefs":{"Monarch":{"xref_id":"0008083"}}}


id: PBO:0059729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 3","termid":"PBO:0059729"}


id: PBO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 20","termid":"PBO:0050164"}


id: PR:Q9UU79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein NSA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05060","PRO:DNx","PANTHER:PTHR12642:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.08","secondary_identifiers":["UniProtKB:Q9UU79"],"synonyms":[{"name":"Spom972h-NSA2","type":"exact"}],"termid":"PR:Q9UU79"}


id: MONDO:0006260
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A type of renal carcinoma affecting mostly young African-Americans. It is located in the medulla of the kidney, and follows an aggressive clinical course. Most reported cases have shown metastatic disease at the time of diagnosis.","definition_xrefs":["NCIT:C7572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"kidney medullary carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MONDO:0017888","DOID:0070475","MedDRA:10064886","UMLS:C4049328","GARD:13175","EFO:1000314","NORD:1999","ONCOTREE:MRC","Orphanet:319319","MEDGEN:888108"],"synonyms":[{"name":"Renal Medullary Carcinoma","type":"exact"},{"name":"carcinoma of renal medulla","type":"exact"},{"name":"kidney medullary carcinoma","type":"exact"},{"name":"renal medulla carcinoma","type":"exact"},{"name":"renal medullary carcinoma","type":"exact"}],"termid":"MONDO:0006260","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0006260"}}}


id: PBO:0085246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (PPIase); nuclear proline isomerase; affects expression of multiple genes via its role in nucleosome assembly; catalyzes isomerization of proline residues in histones H3 and H4, which affects lysine methylation of those histones; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; contains a nucleoplasmin-like fold and can form pentamers","termid":"PBO:0085246"}


id: GO:0016812
data:
  {"annotated_genes":["SJAG_00444","SJAG_01995","SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017168"},{"annotations":[71314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004151"},{"annotations":[63245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033971"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide.","definition_xrefs":["EC:3.5.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00444":null,"SJAG_01995":null,"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70906"],"termid":"GO:0016812","terms_by_termid":{"GO:0004151":null,"GO:0017168":null,"GO:0033971":null}}


id: GO:0050661
data:
  {"annotated_genes":["SJAG_01198","SJAG_06622","SJAG_05015","SJAG_03152","SJAG_02297","SJAG_02135","SJAG_03828","SJAG_00972","SJAG_02945","SJAG_03903","SJAG_04652","SJAG_04270","SJAG_00234","SJAG_03852","SJAG_03115","SJAG_04810","SJAG_03476","SJAG_02148","SJAG_04032","SJAG_00660","SJAG_00636","SJAG_02488","SJAG_02696","SJAG_00027","SJAG_04608","SJAG_01162","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57456,58300,59458,59798,62291,62530,64152,64164,64492,64536,65496,67789,67814,69335,70714,80113,93873,104249,109213,109214,109217,109218,114614],"is_not":false,"summary":null,"term":"GO:0050661"},{"annotations":[58576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070401"},{"annotations":[102831,114597,74033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070402"}]},"cv_name":"molecular_function","definition":"Binding to nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00972":null,"SJAG_01162":null,"SJAG_01198":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02488":null,"SJAG_02696":null,"SJAG_02945":null,"SJAG_03115":null,"SJAG_03152":null,"SJAG_03476":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04032":null,"SJAG_04270":null,"SJAG_04608":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_05015":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NADP binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"NADP or NADPH binding","type":"related"},{"name":"NADP+ or NADPH binding","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate binding","type":"exact"}],"termid":"GO:0050661","terms_by_termid":{"GO:0050661":null,"GO:0070401":null,"GO:0070402":null}}


id: GO:0150074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["PMID:26670206","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150074"}


id: MONDO:0032677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorder with complex brainstem malformation","termid":"MONDO:0100472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 9 with complex brainstem malformation","secondary_identifiers":["MEDGEN:1681109","UMLS:C5193029","GARD:18007","OMIM:618325","Orphanet:572013","DOID:0112228"],"synonyms":[{"name":"LIS9","type":"related"},{"name":"LISSENCEPHALY 9 WITH COMPLEX BRAINSTEM MALFORMATION","type":"related"}],"termid":"MONDO:0032677","xrefs":{"Monarch":{"xref_id":"0032677"}}}


id: PBO:0050368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 71","termid":"PBO:0050368"}


id: MONDO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glioma arising from the central nervous system. This category includes diffuse astrocytoma, ependymoma, oligodendroglioma, and oligoastrocytoma.","definition_xrefs":["NCIT:C132505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grade II glioma","secondary_identifiers":["MEDGEN:1391502","UMLS:C4330050"],"synonyms":[{"name":"WHO grade II glioma","type":"exact"},{"name":"grade II glioma","type":"exact"}],"termid":"MONDO:0021639","xrefs":{"Monarch":{"xref_id":"0021639"}}}


id: GO:1904200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which iodide is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","PMID:20392814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodide transport","termid":"GO:0015705"},{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"iodide transmembrane transport","termid":"GO:1904200"}


id: PBO:0070635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 6","termid":"PBO:0070635"}


id: MONDO:0018666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatoblastoma (HB) is a malignant hepatic tumor and is the most common pediatric liver cancer. It is characterized by anorexia, weight loss and an enlarged abdomen. HB is more common in patients with familial adenomatous polyposis (FAP), and can occur in patients with other pre-existing liver conditions. About 5% of HB cases are associated with genetic factors, especially overgrowth syndromes, such as Beckwith-Wiedemann syndrome (BWS) or hemihypertrophy.","definition_xrefs":["Orphanet:449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatoblastoma","secondary_identifiers":["DOID:687","EFO:1000292","GARD:2657","icd11.foundation:1241693063","icd11.foundation:1556608523","MEDGEN:61644","UMLS:C0206624","ICDO:8970/3","MESH:D018197","NANDO:2200046","NCIT:C3728","ONCOTREE:LIHB","MedDRA:10062001"],"synonyms":[{"name":"HBL","type":"exact"},{"name":"hepatoblastoma","type":"exact"},{"name":"hepatoblastoma, malignant","type":"exact"},{"name":"paediatric embryonal hepatoma","type":"exact"},{"name":"paediatric hepatoblastoma","type":"exact"},{"name":"pediatric embryonal hepatoma","type":"exact"},{"name":"pediatric hepatoblastoma","type":"exact"}],"termid":"MONDO:0018666","xrefs":{"Monarch":{"xref_id":"0018666"}}}


id: GO:0008631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to oxidative stress","synonyms":[{"name":"induction of apoptosis by oxidative stress","type":"related"},{"name":"oxidative stress-induced intrinsic apoptotic signaling pathway","type":"exact"}],"termid":"GO:0008631"}


id: GO:0150166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K4 acetylation (obsolete GO:0150166)","termid":"GO:0150166"}


id: GO:0035991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of nitric oxide (NO).","definition_xrefs":["PMID:21491957","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0098772"],"is_obsolete":false,"name":"nitric oxide sensor activity","synonyms":[{"name":"NO sensor activity","type":"exact"}],"termid":"GO:0035991"}


id: PBO:0088362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(37)-N(1))-methyltransferase activity Trm5","termid":"PBO:0088362"}


id: PBO:0087259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in activation of meiosis; associates with Ime1p and mediates its stability, activates Ndt80p; IME2 expression is positively regulated by Ime1p; human CDK2 can complement ime2 null mutant","termid":"PBO:0087259"}


id: MONDO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete granular cell tumor (obsolete MONDO:0002292)","termid":"MONDO:0002292","xrefs":{"Monarch":{"xref_id":"0002292"}}}


id: GO:0102152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 1-palmitoyl-2-linoleoyl-phosphatidylcholine + NADPH + O2 = 1-palmitoyl-2-vernoloyl-phosphatidylcholine + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete Delta12-linoleate epoxygenase activity (obsolete GO:0102152)","termid":"GO:0102152"}


id: MONDO:0020380
data:
  {"annotated_genes":["SJAG_02084","SJAG_01438","SJAG_01356","SJAG_03692","SJAG_01179","SJAG_02377","SJAG_00526","SJAG_00686","SJAG_00421","SJAG_01317","SJAG_02196","SJAG_02885","SJAG_00087","SJAG_05332","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[86550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[85925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[85751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[85438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[85001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[85516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[87019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[84954,84953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[84939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[85400,85401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[85596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[86046,86045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[86909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"}]},"cv_name":"mondo","definition":"A clinically and genetically heterogeneous group of neurodegenerative diseases characterized by a slowly progressive ataxia of gait, stance and limbs, dysarthria and/or oculomotor disorder, due to cerebellar degeneration in the absence of coexisting diseases. The degenerative process can be limited to the cerebellum (ADCA type 3) or may additionally involve the retina (ADCA type 2), optic nerve, ponto-medullary systems, basal ganglia, cerebral cortex, spinal tracts or peripheral nerves (ADCA type 1). In ACDA type 4, a cerebellar syndrome is associated with epilepsy.","definition_xrefs":["Orphanet:99"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebellar ataxia","termid":"MONDO:0000437"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia","termid":"MONDO:0100310"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00686":null,"SJAG_01179":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01438":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02377":null,"SJAG_02885":null,"SJAG_03692":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:164400","NORD:825","UMLS:C4087347","MEDGEN:1684639","DOID:1441","SCTID:129609000","ICD9:334.3","GARD:4346"],"synonyms":[{"name":"ADCA","type":"exact"},{"name":"Autosomal Dominant Hereditary Ataxia","type":"exact"},{"name":"Pierre Marie cerebellar ataxia (formerly)","type":"related"},{"name":"SCA","type":"broad"},{"name":"autosomal dominant spinocerebellar ataxia","type":"exact"},{"name":"cerebellar ataxia, autosomal dominant","type":"exact"},{"name":"spinocerebellar ataxia","type":"broad"}],"termid":"MONDO:0020380","terms_by_termid":{"MONDO:0007574":null,"MONDO:0008458":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011439":null,"MONDO:0011781":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014417":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0033482":null},"xrefs":{"Monarch":{"xref_id":"0020380"}}}


id: PBO:0003499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis13","termid":"PBO:0003499"}


id: FYPO:0005719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture does not occur during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["GO:1990942","PMID:17881496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000138","FYPO:0000337","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic metaphase chromosome recapture","synonyms":[{"name":"abolished chromosome recapture during mitotic metaphase","type":"exact"},{"name":"abolished kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abolished mitotic kinetochore retrieval","type":"exact"},{"name":"abolished mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"abolished mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"abolished mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abolished mitotic sister kinetochore recapture","type":"exact"},{"name":"mitotic metaphase chromosome recapture abolished","type":"exact"}],"termid":"FYPO:0005719"}


id: GO:0004262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity, and of BZ-Arg-OET > Ac-Tyr-OET. Does not hydrolyze peptide amides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cerevisin activity (obsolete GO:0004262)","synonyms":[{"name":"baker's yeast proteinase B","type":"related"},{"name":"brewer's yeast proteinase","type":"narrow"},{"name":"cerevisin activity","type":"exact"},{"name":"peptidase beta","type":"related"},{"name":"proteinase yscB activity","type":"narrow"},{"name":"yeast proteinase B activity","type":"narrow"}],"termid":"GO:0004262"}


id: PBO:0085270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal cystathionine beta-lyase; converts cystathionine into homocysteine; may be redox regulated by Gto1p; involved in the release of the aromatic thiol 3-mercaptohexanol during wine fermentation","termid":"PBO:0085270"}


id: MONDO:0007486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder with an autosomal dominant pattern of inheritance with variable penetrance. It was initially described among Native Americans belonging to the Haliwa-Saponi tribe of northeastern North Carolina. It is caused by a duplication of chromosomal DNA at 4q35. Clinical signs present in early childhood and include asymptomatic plaques of the epibulbar conjunctivae and oral mucosa. Clinical progression of the plaques to malignancy has not been reported.","definition_xrefs":["NCIT:C3940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hereditary benign intraepithelial dyskeratosis","secondary_identifiers":["MEDGEN:75588","OMIM:127600","Orphanet:352657","icd11.foundation:2059594980","MESH:C562551","UMLS:C0265966","SCTID:400014002","GARD:17524"],"synonyms":[{"name":"Dkbi","type":"related"},{"name":"HBID","type":"exact"},{"name":"Witkop-Von Sallmann disease","type":"exact"},{"name":"dyskeratosis, hereditary benign intraepithelial","type":"related"},{"name":"hereditary benign corneal intraepithelial dyskeratosis","type":"exact"}],"termid":"MONDO:0007486","xrefs":{"Monarch":{"xref_id":"0007486"}}}


id: GO:0032463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein homooligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein oligomerization","termid":"GO:0032460"},{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"negatively_regulates","term_name":"protein homooligomerization","termid":"GO:0051260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein homooligomerization","synonyms":[{"name":"down regulation of protein homooligomerization","type":"exact"},{"name":"down-regulation of protein homooligomerization","type":"exact"},{"name":"downregulation of protein homooligomerization","type":"exact"},{"name":"inhibition of protein homooligomerization","type":"narrow"}],"termid":"GO:0032463"}


id: MONDO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholecystitis that is characterized by nodules containing lipid.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystitis","termid":"MONDO:0002155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"xanthogranulomatous cholecystitis","secondary_identifiers":["icd11.foundation:294033251","DOID:9766","SCTID:448286002","MESH:C536762","UMLS:C1337035","NCIT:C35792","MEDGEN:235004"],"synonyms":[{"name":"CX","type":"related"}],"termid":"MONDO:0004875","xrefs":{"Monarch":{"xref_id":"0004875"}}}


id: PATO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the abdomen of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventrally rotated","termid":"PATO:0001659"}


id: PBO:0083787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA and snoRNA maturation; competes with TLC1 RNA for binding to Est2p, suggesting a role in negative regulation of telomerase; human homolog inhibits telomerase; contains a G-patch RNA interacting domain","termid":"PBO:0083787"}


id: FYPO:0006282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased at chromosome arms.","definition_xrefs":["PomBase:mah","PMID:28977643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic recombination at chromosome arms","termid":"FYPO:0006282"}


id: GO:0048381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the lateral mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"lateral mesoderm morphogenesis","termid":"GO:0048369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm structural organization","synonyms":[{"name":"lateral mesoderm structural organisation","type":"exact"},{"name":"lateral plate mesoderm structural organization","type":"exact"}],"termid":"GO:0048381"}


id: PBO:0063241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 6","termid":"PBO:0063241"}


id: PBO:0081216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MIZ-type containing 1","termid":"PBO:0081216"}


id: PBO:0083299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3' end of ORF ASI1/YMR119W","termid":"PBO:0083299"}


id: MONDO:0021108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by acute inflammation of the meninges of the brain and/or spinal cord.","definition_xrefs":["NCIT:C26828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningitis","secondary_identifiers":["MEDGEN:6298","MESH:D008581","ICD9:322.9","SCTID:7180009","UMLS:C0025289"],"synonyms":[{"name":"inflammation of meninx","type":"exact"},{"name":"meningitis","type":"exact"},{"name":"meningitis (disease)","type":"exact"},{"name":"meninx inflammation","type":"exact"}],"termid":"MONDO:0021108","xrefs":{"Monarch":{"xref_id":"0021108"}}}


id: PR:Q92399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10917:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.12","secondary_identifiers":["UniProtKB:Q92399"],"synonyms":[{"name":"DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I, II, and III subunit ABC3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC14C8.12","type":"related"},{"name":"Spom972h-POLR2H","type":"exact"}],"termid":"PR:Q92399"}


id: MONDO:0011188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arrhythmogenic right ventricular dysplasia associated with variation in the region 14q12-q22.","definition_xrefs":["DOID:0110072","PMID:8824801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 3","secondary_identifiers":["OMIM:602086","MESH:C566584","MEDGEN:356108","UMLS:C1865882"],"synonyms":[{"name":"ARVC3","type":"exact"},{"name":"ARVD3","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 3","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 3","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 3","type":"related"},{"name":"familial arrhythmogenic right ventricular dysplasia 3","type":"exact"}],"termid":"MONDO:0011188","xrefs":{"Monarch":{"xref_id":"0011188"}}}


id: PBO:0011115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic dynein intermediate light chain Dli1/Dil1","termid":"PBO:0011115"}


id: GO:0016848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the breakage of a bond between carbon and any halogen atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbon-halide lyase activity","secondary_identifiers":["EC:4.5.-.-"],"termid":"GO:0016848"}


id: PBO:0087584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); necessary for maintaining sister chromatid cohesion in prophase I of meiosis by inhibiting premature ubiquitination and subsequent degradation of substrates by the APC(Ama1) ubiquitin ligase","termid":"PBO:0087584"}


id: PBO:0089560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec66","termid":"PBO:0089560"}


id: MONDO:0007526
data:
  {"annotated_genes":["SJAG_00183","SJAG_00222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012873"},{"annotations":[85786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014139"}]},"cv_name":"mondo","definition":"A form of Ehlers-Danlos syndrome characterized by a premature aging with sparse hair, macrocephaly, loose elastic skin, failure to thrive, joint laxity, psychomotor retardation, hypotonia, and defective wound healing with atrophic scars.","definition_xrefs":["Orphanet:75496"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00222":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, spondylodysplastic type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:720861000","DOID:0050802","GARD:9991","MESH:C536201"],"synonyms":[{"name":"B4GALT7-CDG","type":"exact"},{"name":"EDS, progeroid type","type":"exact"},{"name":"EDSSPD1","type":"narrow"},{"name":"Ehlers-Danlos syndrome progeroid type","type":"exact"},{"name":"Ehlers-Danlos syndrome with short stature and limb anomalies","type":"narrow"},{"name":"Ehlers-Danlos syndrome, progeroid type","type":"related"},{"name":"Ehlers-Danlos syndrome, progeroid type (former)","type":"related"},{"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 1","type":"narrow"},{"name":"PDS","type":"exact"},{"name":"Pds, defective biosynthesis of","type":"narrow"},{"name":"XGPT deficiency","type":"narrow"},{"name":"defective biosynthesis of proteodermatan sulfate","type":"exact"},{"name":"defective biosynthesis of proteodermatan sulphate","type":"exact"},{"name":"dermatan sulfate proteoglycan","type":"narrow"},{"name":"dermatan sulphate proteoglycan","type":"narrow"},{"name":"galactosyltransferase 1 deficiency","type":"narrow"},{"name":"galactosyltransferase I deficiency","type":"exact"},{"name":"proteodermatan sulfate, defective biosynthesis of","type":"narrow"},{"name":"spondylodysplastic Ehlers-Danlos syndrome","type":"related"},{"name":"xylosylprotein 4-beta-galactosyltransferase deficiency","type":"narrow"}],"termid":"MONDO:0007526","terms_by_termid":{"MONDO:0012873":null,"MONDO:0014139":null},"xrefs":{"Monarch":{"xref_id":"0007526"}}}


id: PBO:0068148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 455","termid":"PBO:0068148"}


id: GO:0000779
data:
  {"annotated_genes":["SJAG_03327","SJAG_05273","SJAG_01278","SJAG_00207","SJAG_01371","SJAG_03418","SJAG_02336","SJAG_00646","SJAG_00918","SJAG_00697","SJAG_03989","SJAG_05321","SJAG_04038","SJAG_01831","SJAG_02731","SJAG_03926","SJAG_00594","SJAG_05319","SJAG_00684","SJAG_04259","SJAG_02664","SJAG_02814","SJAG_03619","SJAG_00350","SJAG_01546","SJAG_03683","SJAG_01836","SJAG_01224","SJAG_03220","SJAG_03832","SJAG_03048","SJAG_02624","SJAG_01613","SJAG_03916","SJAG_01082","SJAG_03437","SJAG_04177","SJAG_04412","SJAG_02651","SJAG_01228","SJAG_04126","SJAG_00418","SJAG_00307","SJAG_01211","SJAG_04884","SJAG_01805","SJAG_03217","SJAG_04581","SJAG_04623","SJAG_05266","SJAG_01837","SJAG_04040","SJAG_02513","SJAG_03681","SJAG_01601","SJAG_03161","SJAG_02761","SJAG_01775","SJAG_02807","SJAG_03540","SJAG_05220","SJAG_04841","SJAG_04699","SJAG_03867","SJAG_01330","SJAG_01067","SJAG_02346","SJAG_04745","SJAG_01297","SJAG_01928","SJAG_04255","SJAG_04076","SJAG_00082","SJAG_00666","SJAG_02451","SJAG_04696","SJAG_05019","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87551,89812,90670,91019,98897,101854,107534,107579,107615,116664],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[67913,116722,76202,63359,74682,62154,100301,79407,63304,60190],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[111977,116468,99051,110107,115704,113025,114295],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000939"},{"annotations":[75928,97045,79622,89731,96532,74996,113185,89102,79246,70119,109011,104656,104328,114887,111842,102134,105272,118660,99918,119326,108045,94520,106110,111686,90531,118908,73015,72548,98995,103672],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000776"},{"annotations":[101118,113581],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[79564,69521,74086,60088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000444"},{"annotations":[89433,89786,106159,113353,94059,105344,113937,61517,94454,97679,112916],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031511"},{"annotations":[68669,111478],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033551"},{"annotations":[74490,75494,75531,76873],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"},{"annotations":[100162,114300,118466],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000940"}]},"cv_name":"cellular_component","definition":"The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.","definition_xrefs":["GOC:kmv","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome, centromeric region","termid":"GO:0000775"},{"relation_name":"part_of","term_name":"condensed chromosome","termid":"GO:0000793"}],"gene_count":78,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00307":null,"SJAG_00350":null,"SJAG_00418":null,"SJAG_00594":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01067":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01831":null,"SJAG_01836":null,"SJAG_01837":null,"SJAG_01928":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02513":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02664":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03418":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03832":null,"SJAG_03867":null,"SJAG_03916":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04038":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04581":null,"SJAG_04623":null,"SJAG_04696":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05273":null,"SJAG_05319":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"condensed chromosome, centromeric region","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:32109380":null},"secondary_identifiers":["GO:0000780"],"synonyms":[{"name":"condensed chromosome, centric region","type":"exact"},{"name":"condensed chromosome, centromere","type":"related"},{"name":"condensed chromosome, pericentric region","type":"related"},{"name":"condensed nuclear chromosome, centromeric region","type":"narrow"}],"termid":"GO:0000779","terms_by_termid":{"GO:0000444":null,"GO:0000776":null,"GO:0000779":null,"GO:0000939":null,"GO:0000940":null,"GO:0031262":null,"GO:0031511":null,"GO:0033551":null,"GO:0042729":null,"GO:0180019":null}}


id: GO:0035569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The trimethylation of the N-terminal proline of proteins to form the derivative N,N,N-trimethylproline.","definition_xrefs":["PMID:20668449"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline trimethylation (obsolete GO:0035569)","synonyms":[{"name":"N-terminal peptidyl-proline trimethylation","type":"exact"}],"termid":"GO:0035569"}


id: PBO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.-","termid":"PBO:0000784"}


id: GO:1990706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the assembly of the mitotic checkpoint complex that in turn inhibits the anaphase promoting complex/cyclosome (APC/C).","definition_xrefs":["PMID:22898774","PMID:22493223","GOC:bhm","intAct:EBI-10691224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MAD1 complex","synonyms":[{"name":"MAD1 homodimer","type":"exact"}],"termid":"GO:1990706"}


id: MONDO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infrequent esophageal carcinoma arising from esophageal glands. (WHO)","definition_xrefs":["NCIT:C5342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"esophageal adenocarcinoma","termid":"MONDO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophageal adenoid cystic carcinoma","secondary_identifiers":["DOID:4878","MEDGEN:232468","UMLS:C1333441"],"synonyms":[{"name":"adenoid cystic carcinoma of esophagus","type":"exact"},{"name":"adenoid cystic carcinoma of oesophagus","type":"exact"},{"name":"adenoid cystic carcinoma of the esophagus","type":"exact"},{"name":"adenoid cystic carcinoma of the oesophagus","type":"exact"},{"name":"adenoid cystic carcinoma, esophagus","type":"exact"},{"name":"adenoid cystic carcinoma, oesophagus","type":"exact"},{"name":"adenoid cystic esophagus carcinoma","type":"exact"},{"name":"adenoid cystic oesophagus carcinoma","type":"exact"},{"name":"esophageal adenoid cystic cancer","type":"exact"},{"name":"esophageal adenoid cystic carcinoma","type":"exact"},{"name":"esophagus adenoid cystic carcinoma","type":"exact"},{"name":"oesophagus adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003186","xrefs":{"Monarch":{"xref_id":"0003186"}}}


id: GO:0052559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host immune response (obsolete GO:0052559)","synonyms":[{"name":"activation by symbiont of host immune response","type":"exact"},{"name":"induction by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host immune response","type":"related"},{"name":"stimulation by symbiont of host immune response","type":"related"},{"name":"up regulation by symbiont of host immune response","type":"related"},{"name":"up-regulation by symbiont of host immune response","type":"related"},{"name":"upregulation by symbiont of host immune response","type":"exact"}],"termid":"GO:0052559"}


id: GO:1990536
data:
  {"annotated_genes":["SJAG_00276","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76331,93099],"is_not":false,"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpyruvate into the Golgi lumen across the Golgi membrane.","definition_xrefs":["PMID:25195688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transport","termid":"GO:0089722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane import into Golgi lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990536","terms_by_termid":{"GO:1990536":null}}


id: PBO:0091688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Itsy-Bitsy Phosphatase","termid":"PBO:0091688"}


id: PBO:0091151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane V-ATPase assembly factor Vph2/Vma12","termid":"PBO:0091151"}


id: PBO:0059587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial amidoxime reducing component 2","termid":"PBO:0059587"}


id: GO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tellurite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tellurite transport","termid":"GO:0015710"}


id: PBO:0051493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 10","termid":"PBO:0051493"}


id: PBO:0002967
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degradation is promoted by two separate CSN-dependent mechanisms","termid":"PBO:0002967"}


id: MONDO:0011136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Quebec platelet syndrome (QPS) is a platelet granule disorder characterized by moderate to severe bleeding after trauma, surgery or obstetric interventions, frequent ecchymoses, mucocutaneous bleeding and muscle and joint bleeds.","definition_xrefs":["Orphanet:220436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"alpha granule disease","termid":"MONDO:0020117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Quebec platelet disorder","secondary_identifiers":["DOID:0111050","UMLS:C1866423","GARD:8345","OMIM:601709","icd11.foundation:1618741944","MEDGEN:356528","MESH:C536260"],"synonyms":[{"name":"BDPLT5","type":"exact"},{"name":"QPD","type":"related"},{"name":"Quebec platelet disorder","type":"exact"},{"name":"bleeding disorder, platelet-type, 5","type":"related"},{"name":"factor 5 Quebec","type":"related"},{"name":"factor V Quebec","type":"exact"},{"name":"platelet-type bleeding disorder 5","type":"exact"}],"termid":"MONDO:0011136","xrefs":{"Monarch":{"xref_id":"0011136"}}}


id: PBO:0084785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase); dephosphorylates phosphatidylglycerolphosphate to generate phosphatidylglycerol, an essential step during cardiolipin biosynthesis; null mutant is sensitive to tunicamycin, DTT","termid":"PBO:0084785"}


id: PBO:0041084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRMS1 like transcriptional repressor","termid":"PBO:0041084"}


id: PBO:0072347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 33","termid":"PBO:0072347"}


id: GO:0043353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires specialized features of an erythrocyte without a nucleus. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleate erythrocyte differentiation","synonyms":[{"name":"enucleate RBC differentiation","type":"exact"},{"name":"enucleate red blood cell differentiation","type":"exact"}],"termid":"GO:0043353"}


id: PBO:0038700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 12","termid":"PBO:0038700"}


id: PBO:0042166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 27","termid":"PBO:0042166"}


id: PBO:0088394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2","termid":"PBO:0088394"}


id: GO:1905689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:bc","GOC:PARL","PMID:23091060","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diacylglycerol kinase activity (obsolete GO:1905689)","synonyms":[{"name":"activation of 1,2-diacylglycerol kinase (phosphorylating)","type":"narrow"},{"name":"activation of 1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"activation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"activation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"activation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"activation of DG kinase activity","type":"narrow"},{"name":"activation of DGK activity","type":"narrow"},{"name":"activation of arachidonoyl-specific diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"activation of diglyceride kinase activity","type":"narrow"},{"name":"activation of sn-1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"positive regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"positive regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"positive regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of DG kinase activity","type":"exact"},{"name":"positive regulation of DGK activity","type":"exact"},{"name":"positive regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"positive regulation of diglyceride kinase activity","type":"exact"},{"name":"positive regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up regulation of DG kinase activity","type":"exact"},{"name":"up regulation of DGK activity","type":"exact"},{"name":"up regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up regulation of diglyceride kinase activity","type":"exact"},{"name":"up regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up-regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up-regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up-regulation of DG kinase activity","type":"exact"},{"name":"up-regulation of DGK activity","type":"exact"},{"name":"up-regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up-regulation of diglyceride kinase activity","type":"exact"},{"name":"up-regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"upregulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"upregulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"upregulation of DG kinase activity","type":"exact"},{"name":"upregulation of DGK activity","type":"exact"},{"name":"upregulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"upregulation of diglyceride kinase activity","type":"exact"},{"name":"upregulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905689"}


id: PBO:0012853
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWo Spored","termid":"PBO:0012853"}


id: MONDO:0021224
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the iris.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"},{"relation_name":"is_a","term_name":"uvea neoplasm","termid":"MONDO:0021225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"iris neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D015811","NCIT:C3142","UMLS:C0022079","MEDGEN:7159"],"synonyms":[{"name":"iris neoplasm (disease)","type":"exact"},{"name":"iris tumor","type":"exact"},{"name":"iris tumour","type":"exact"},{"name":"neoplasm of iris","type":"exact"},{"name":"neoplasm of the iris","type":"exact"},{"name":"tumor of iris","type":"exact"},{"name":"tumor of the iris","type":"exact"},{"name":"tumour of iris","type":"exact"},{"name":"tumour of the iris","type":"exact"}],"termid":"MONDO:0021224","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0021224"}}}


id: GO:0075209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host cAMP-mediated signal transduction (obsolete GO:0075209)","synonyms":[{"name":"positive regulation by symbiont of host cAMP-mediated signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075209"}


id: PBO:0004345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HVA22/TB2/DP1 family protein","termid":"PBO:0004345"}


id: GO:0047038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NAD+ = D-ribulose + H+ + NADH.","definition_xrefs":["RHEA:17389","EC:1.1.1.250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-arabinitol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.250-RXN","KEGG_REACTION:R07134"],"synonyms":[{"name":"D-arabinitol 2-dehydrogenase (ribulose-forming) activity","type":"related"},{"name":"D-arabinitol:NAD+ 2-oxidoreductase (D-ribulose-forming)","type":"related"}],"termid":"GO:0047038"}


id: PBO:0067920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 222","termid":"PBO:0067920"}


id: PBO:0050019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DO beta","termid":"PBO:0050019"}


id: PBO:0061325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B3","termid":"PBO:0061325"}


id: GO:0009024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-tagatose 6-phosphate = ADP + D-tagatose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"tagatose-6-phosphate kinase activity","secondary_identifiers":["MetaCyc:TAGAKIN-RXN","RHEA:12420"],"synonyms":[{"name":"ATP:D-tagatose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"phosphotagatokinase activity","type":"related"}],"termid":"GO:0009024"}


id: GO:1990563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is wholly or partially contained within the lumen or membrane of the extracellular vesicular exosome.","definition_xrefs":["GOC:bhm","PMID:22660413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular exosome","termid":"GO:0070062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"extracellular exosome complex","synonyms":[{"name":"exosome complex","type":"exact"},{"name":"extracellular vesicular exosome complex","type":"exact"}],"termid":"GO:1990563"}


id: GO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 27) = CoA + histone H3 N6-acetyl-L-lysine (position 27).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0034212","GO:0016740","GO:0140096","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"histone H3K27 acetyltransferase activity","synonyms":[{"name":"histone H3-K27 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K27 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K27 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0044017"}


id: GO:0004910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-1 to initiate a change in cell activity by inhibiting the activity of type I interleukin receptors.","definition_xrefs":["PMID:15062641","PMID:18613828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor activity","termid":"GO:0004908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-1, type II, blocking receptor activity","secondary_identifiers":["GO:0019968"],"synonyms":[{"name":"IL-1 type II, blocking binding","type":"exact"},{"name":"IL-1 type II, blocking receptor","type":"exact"},{"name":"interleukin-1 blocking receptor activity","type":"exact"},{"name":"interleukin-1 type II receptor activity","type":"exact"},{"name":"interleukin-1, type II, blocking binding","type":"related"}],"termid":"GO:0004910"}


id: MONDO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endocrine disorder characterized by excessive production of aldosterone by the adrenal glands. Causes include adrenal gland adenoma and adrenal gland hyperplasia. The overproduction of aldosterone results in sodium and water retention and hypokalemia. Patients present with high blood pressure, muscle weakness, and headache.","definition_xrefs":["NCIT:C34510"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"adrenal cortex adenoma","termid":"MONDO:0003924"},{"relation_name":"is_a","term_name":"hyperaldosteronism","termid":"MONDO:0003009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary aldosteronism","secondary_identifiers":["ICD9:255.12","MESH:D006929","UMLS:C1384514","ICD10CM:E26.0","DOID:12028","MEDGEN:278002","NANDO:2200361","SCTID:190507007"],"synonyms":[{"name":"Conn syndrome","type":"exact"},{"name":"Conn's syndrome","type":"exact"},{"name":"primary aldosteronism","type":"exact"},{"name":"primary hyperaldosteronism","type":"exact"}],"termid":"MONDO:0001422","xrefs":{"Monarch":{"xref_id":"0001422"}}}


id: MOD:00166
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-glucosyl-tyrosine.","definition_xrefs":["PubMed:3181138","Unimod:41#Y","PubMed:15279557","RESID:AA0157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"O-glycosyl-L-tyrosine","termid":"MOD:01927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O4'-glucosyl-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-alpha-D-glucopyranosyloxy)phenylpropanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Glc) tyrosine","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"O4'-glucosyl-L-tyrosine","type":"exact"},{"name":"O4'-glycosyl-L-tyrosine","type":"exact"},{"name":"O4GlcTyr","type":"exact"}],"termid":"MOD:00166"}


id: MONDO:0006580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small (one mm or less) vesicular, papular or pustular monomorphous rash, which is associated with heat, fever or occlusion of sweat glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sweat gland disorder","termid":"MONDO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria","secondary_identifiers":["DOID:1382","Wikipedia:Miliaria","icd11.foundation:204420062","MEDGEN:44443","MESH:D008883","SCTID:63951004","NCIT:C34820","UMLS:C0026113"],"synonyms":[{"name":"heat rash","type":"exact"},{"name":"prickly heat","type":"exact"}],"termid":"MONDO:0006580","xrefs":{"Monarch":{"xref_id":"0006580"}}}


id: PBO:0047534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 6","termid":"PBO:0047534"}


id: PATO:0000580
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000580 absolute weight value (obsolete PATO:0000580)","termid":"PATO:0000580"}


id: MONDO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary choroidal atrophy","termid":"MONDO:0004883"},{"relation_name":"is_a","term_name":"central areolar choroidal dystrophy","termid":"MONDO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"partial central choroid dystrophy","secondary_identifiers":["MEDGEN:573145","NANDO:1200939","DOID:9822","ICD9:363.53","UMLS:C0339427","SCTID:193468002"],"synonyms":[{"name":"choroidal dystrophy, central areolar","type":"exact"},{"name":"circinate choroidal dystrophy","type":"related"},{"name":"partial central choroid dystrophy","type":"exact"},{"name":"partial central dystrophy of choroid","type":"related"}],"termid":"MONDO:0004890","xrefs":{"Monarch":{"xref_id":"0004890"}}}


id: PBO:0039146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 3","termid":"PBO:0039146"}


id: MONDO:0014803
data:
  {"annotated_genes":["SJAG_01417"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85556],"is_not":false,"summary":null,"term":"MONDO:0014803"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"},{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"spasticity-ataxia-gait anomalies syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225178","MEDGEN:905660","GARD:12681","OMIM:616859","Orphanet:401866"],"synonyms":[{"name":"SPAHGC","type":"exact"},{"name":"childhood-onset spasticity with hyperglycinemia","type":"related"},{"name":"childhood-onset spasticity with variant non-ketotic hyperglycinemia","type":"exact"},{"name":"spasticity, childhood-onset, with hyperglycinemia","type":"exact"}],"termid":"MONDO:0014803","terms_by_termid":{"MONDO:0014803":null},"xrefs":{"Monarch":{"xref_id":"0014803"}}}


id: PBO:0012857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-5' exoribonuclease, PH-like Mtr3","termid":"PBO:0012857"}


id: PBO:0040193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 6","termid":"PBO:0040193"}


id: PBO:0087489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; involved in 3' end formation of mRNA via cleavage and polyadenylation of pre-mRNA; binds pre-mRNA via the zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of the endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; possible role in ubiquitination of Pap1p; relocalizes to the cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0087489"}


id: GO:0047706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrobiochanin A + NADP+ = biochanin A + H+ + NADPH.","definition_xrefs":["EC:1.3.1.46","RHEA:12817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"biochanin-A reductase activity","secondary_identifiers":["KEGG_REACTION:R02954","MetaCyc:BIOCHANIN-A-REDUCTASE-RXN"],"synonyms":[{"name":"dihydrobiochanin-A:NADP+ delta2-oxidoreductase activity","type":"related"}],"termid":"GO:0047706"}


id: PBO:0064812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2","termid":"PBO:0064812"}


id: FYPO:0007317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation in the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased cytoplasmic translation","synonyms":[{"name":"decreased cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic translation during vegetative growth","type":"exact"},{"name":"reduced cytoplasmic translation","type":"exact"}],"termid":"FYPO:0007317"}


id: PBO:0069838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1124, pseudogene","termid":"PBO:0069838"}


id: GO:0070482
data:
  {"annotated_genes":["SJAG_04018","SJAG_00221","SJAG_00642","SJAG_03345","SJAG_01585","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101008,111509,116793,109651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[89009,116201],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070482","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: PBO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 33","termid":"PBO:0051609"}


id: GO:0047916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-6-deoxy-D-talose + NAD(P)+ = GDP-4-dehydro-6-deoxy-D-talose + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.135","MetaCyc:GDP-6-DEOXY-D-TALOSE-4-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"GDP-6-deoxy-D-talose 4-dehydrogenase activity","synonyms":[{"name":"GDP-6-deoxy-D-talose:NAD(P)+ 4-oxidoreductase activity","type":"related"},{"name":"guanosine diphospho-6-deoxy-D-talose dehydrogenase activity","type":"related"}],"termid":"GO:0047916"}


id: PR:000050507
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septum-promoting GTP-binding protein 1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:9420333","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septum-promoting GTP-binding protein 1 (Schizosaccharomyces pombe)","termid":"PR:000050506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spg1/GTP+","pombase_gene_id":"SPAC1565.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: septum-promoting GTP-binding protein 1, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-spg1/GTP+","type":"exact"},{"name":"spg1/GTP+","type":"exact"}],"termid":"PR:000050507"}


id: PBO:0043134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 2","termid":"PBO:0043134"}


id: MONDO:0018772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome (JS) is characterized by congenital malformation of the brainstem and agenesis or hypoplasia of the cerebellar vermis leading to an abnormal respiratory pattern, nystagmus, hypotonia, ataxia, and delay in achieving motor milestones.","definition_xrefs":["Orphanet:475"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation of the cerebellar vermis (obsolete MONDO:0020130)","termid":"MONDO:0020130"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome","secondary_identifiers":["icd11.foundation:1414756318","NORD:1312","OMIMPS:213300","MEDGEN:98464","SCTID:716997004","UMLS:C0431399","DOID:0050777","GARD:6802","NCIT:C74996"],"synonyms":[{"name":"CPD IV","type":"exact"},{"name":"JBTS","type":"exact"},{"name":"Joubert syndrome","type":"exact"},{"name":"Joubert syndrome type A","type":"exact"},{"name":"Joubert-Boltshauser syndrome","type":"exact"},{"name":"cerebellar vermis agenesis","type":"related"},{"name":"cerebelloparenchymal disorder IV","type":"exact"},{"name":"classic Joubert syndrome","type":"exact"},{"name":"pure Joubert syndrome","type":"exact"}],"termid":"MONDO:0018772","xrefs":{"Monarch":{"xref_id":"0018772"}}}


id: PATO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting increased activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"behavioural active","termid":"PATO:0001707"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased behavioural activity","synonyms":[{"name":"hyperactive","type":"exact"}],"termid":"PATO:0000760"}


id: FYPO:0007237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency at which two double-strand breaks (DSBs) form close to each other during meiosis I is increased.","definition_xrefs":["PMID:30217891","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"increased meiotic DNA double-strand break formation near existing double-strand break","synonyms":[{"name":"decreased DSB interference","type":"exact"},{"name":"decreased distance between meiotic DSBs","type":"exact"}],"termid":"FYPO:0007237"}


id: PBO:0040278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antioxidant 1 copper chaperone","termid":"PBO:0040278"}


id: GO:0050279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sepiapterin + H2O = xanthopterin-B2 + NH3.","definition_xrefs":["MetaCyc:SEPIAPTERIN-DEAMINASE-RXN","EC:3.5.4.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"sepiapterin deaminase activity","secondary_identifiers":["RHEA:14025"],"synonyms":[{"name":"sepiapterin aminohydrolase activity","type":"related"}],"termid":"GO:0050279"}


id: GO:0006209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"cytosine metabolic process","termid":"GO:0019858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"cytosine catabolic process","synonyms":[{"name":"cytosine breakdown","type":"exact"},{"name":"cytosine catabolism","type":"exact"},{"name":"cytosine degradation","type":"exact"}],"termid":"GO:0006209"}


id: MONDO:0007245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cutaneous disorder characterized by the presence of several cafe-au-lait (CAL) macules without any other manifestations of neurofibromatosis or any other systemic disorder.","definition_xrefs":["Orphanet:2678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cafe au lait spots, multiple","secondary_identifiers":["MEDGEN:396266","MESH:C537421","OMIM:114030","UMLS:C1861975","GARD:3967"],"synonyms":[{"name":"NF6","type":"exact"},{"name":"autosomal dominant café au lait spots","type":"exact"},{"name":"cafe-au-lait spots, multiple","type":"exact"},{"name":"familial cafe-au-lait spots","type":"exact"},{"name":"familial café-au-lait spots","type":"exact"},{"name":"multiple cafe-au-lait spots","type":"exact"},{"name":"multiple cafe-au-lait syndrome","type":"exact"},{"name":"multiple café-au-lait spots","type":"exact"},{"name":"multiple café-au-lait syndrome","type":"exact"},{"name":"neurofibromatosis type 6","type":"exact"}],"termid":"MONDO:0007245","xrefs":{"Monarch":{"xref_id":"0007245"}}}


id: MONDO:1010502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Budd-Chiari syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Budd-Chiari syndrome, non-human animal","termid":"MONDO:1010026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Budd-chiari syndrome, domestic cat","secondary_identifiers":["OMIA:001203-9685"],"termid":"MONDO:1010502","xrefs":{"Monarch":{"xref_id":"1010502"}}}


id: FYPO:0003890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis is abnormal. Primary cell septum biogenesis results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of the primary cell septum during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"abnormal primary cell septum biogenesis","synonyms":[{"name":"abnormal primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"abnormal primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"abnormal primary cell septum formation","type":"related"},{"name":"abnormal primary cell septum synthesis","type":"related"},{"name":"abnormal primary septum biogenesis","type":"exact"}],"termid":"FYPO:0003890"}


id: PBO:0078614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64E, pseudogene","termid":"PBO:0078614"}


id: FYECO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which caesium chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CsCl","synonyms":[{"name":"caesium chloride added","type":"exact"},{"name":"cesium chloride added","type":"exact"}],"termid":"FYECO:0000206"}


id: FYPO:0007077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding to ubiquitin by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished ubiquitin binding","synonyms":[{"name":"ubiquitin binding abolished","type":"exact"}],"termid":"FYPO:0007077"}


id: PR:Q9USP8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD] subunit 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.05c","secondary_identifiers":["UniProtKB:Q9USP8"],"synonyms":[{"name":"NAD(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IDH3A","type":"exact"},{"name":"isocitric dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP8"}


id: PBO:0069760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1043, pseudogene","termid":"PBO:0069760"}


id: PBO:0075114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 163","termid":"PBO:0075114"}


id: FYPO:0004148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxamine-phosphate oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal pyridoxamine-phosphate oxidase activity","termid":"FYPO:0004148"}


id: PBO:0060556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin like 2","termid":"PBO:0060556"}


id: MONDO:0020786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short sleep, familial natural, 2 (obsolete MONDO:0020786)","secondary_identifiers":["OMIM:618591"],"synonyms":[{"name":"FNSS2","type":"related"},{"name":"SHORT SLEEP, FAMILIAL NATURAL, 2","type":"related"},{"name":"short sleep, familial natural, 2","type":"exact"}],"termid":"MONDO:0020786","xrefs":{"Monarch":{"xref_id":"0020786"}}}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: PBO:0030271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_slow_rereplication","termid":"PBO:0030271"}


id: GO:0031384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the start of mating projection formation by unicellular fungi.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of initiation of mating projection growth","termid":"GO:0031384"}


id: GO:0043799
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114559],"is_not":false,"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) glycine + H2O + O2 = glyoxylate + NH3 + hydrogen peroxide; (2) D-alanine + H2O + O2 = pyruvate + NH3 + hydrogen peroxide; (3) sarcosine + H2O + O2 = glyoxylate + methylamine + hydrogen peroxide; (4) N-ethylglycine + H2O + O2 = glyoxylate + ethylamine + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glycine oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycine:oxygen oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0043799","terms_by_termid":{"GO:0043799":null}}


id: MONDO:0015865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign tumor of fallopian tubes (obsolete MONDO:0015865)","termid":"MONDO:0015865","xrefs":{"Monarch":{"xref_id":"0015865"}}}


id: PBO:0068080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 386","termid":"PBO:0068080"}


id: MONDO:0011251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","secondary_identifiers":["UMLS:C1865203","MEDGEN:400705","MESH:C566524","OMIM:602556"],"synonyms":[{"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","type":"exact"}],"termid":"MONDO:0011251","xrefs":{"Monarch":{"xref_id":"0011251"}}}


id: PBO:0049367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2","termid":"PBO:0049367"}


id: PBO:0058181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4475","termid":"PBO:0058181"}


id: MONDO:0006775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete haemophilus influenzae meningitis (obsolete MONDO:0006775)","termid":"MONDO:0006775","xrefs":{"Monarch":{"xref_id":"0006775"}}}


id: PR:O94631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03986","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.13c","secondary_identifiers":["UniProtKB:O94631"],"synonyms":[{"name":"21S rRNA (guanosine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRM1","type":"exact"},{"name":"mitochondrial large ribosomal RNA ribose methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94631"}


id: PBO:0113319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; acts as a scaffold protein bridging Nam7p and Upf3p; involved in telomere maintenance; contains an acidic domain and three middle domains of eukaryotic initiation factor 4G (mIF4G) with aspartic 59 of mIF4G-1 important for NMD activity and translation termination accuracy","termid":"PBO:0113319"}


id: PBO:0056871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence B","termid":"PBO:0056871"}


id: PBO:0079928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URI1 prefoldin like chaperone","termid":"PBO:0079928"}


id: GO:1905494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G-quadruplex DNA binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:26503245"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-quadruplex DNA binding (obsolete GO:1905494)","synonyms":[{"name":"down regulation of G quadruplex DNA binding","type":"exact"},{"name":"down regulation of G quartet DNA binding","type":"exact"},{"name":"down regulation of G-DNA binding","type":"exact"},{"name":"down regulation of G-quadruplex DNA binding","type":"exact"},{"name":"down regulation of G-quartet DNA binding","type":"exact"},{"name":"down regulation of quadruplex DNA binding","type":"exact"},{"name":"down regulation of tetraplex DNA binding","type":"exact"},{"name":"down-regulation of G quadruplex DNA binding","type":"exact"},{"name":"down-regulation of G quartet DNA binding","type":"exact"},{"name":"down-regulation of G-DNA binding","type":"exact"},{"name":"down-regulation of G-quadruplex DNA binding","type":"exact"},{"name":"down-regulation of G-quartet DNA binding","type":"exact"},{"name":"down-regulation of quadruplex DNA binding","type":"exact"},{"name":"down-regulation of tetraplex DNA binding","type":"exact"},{"name":"downregulation of G quadruplex DNA binding","type":"exact"},{"name":"downregulation of G quartet DNA binding","type":"exact"},{"name":"downregulation of G-DNA binding","type":"exact"},{"name":"downregulation of G-quadruplex DNA binding","type":"exact"},{"name":"downregulation of G-quartet DNA binding","type":"exact"},{"name":"downregulation of quadruplex DNA binding","type":"exact"},{"name":"downregulation of tetraplex DNA binding","type":"exact"},{"name":"inhibition of G quadruplex DNA binding","type":"narrow"},{"name":"inhibition of G quartet DNA binding","type":"narrow"},{"name":"inhibition of G-DNA binding","type":"narrow"},{"name":"inhibition of G-quadruplex DNA binding","type":"narrow"},{"name":"inhibition of G-quartet DNA binding","type":"narrow"},{"name":"inhibition of quadruplex DNA binding","type":"narrow"},{"name":"inhibition of tetraplex DNA binding","type":"narrow"},{"name":"negative regulation of G quadruplex DNA binding","type":"exact"},{"name":"negative regulation of G quartet DNA binding","type":"exact"},{"name":"negative regulation of G-DNA binding","type":"exact"},{"name":"negative regulation of G-quartet DNA binding","type":"exact"},{"name":"negative regulation of quadruplex DNA binding","type":"exact"},{"name":"negative regulation of tetraplex DNA binding","type":"exact"}],"termid":"GO:1905494"}


id: MONDO:0017629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sodium channelopathy-related small fiber neuropathy (obsolete MONDO:0017629)","secondary_identifiers":["Orphanet:306577"],"termid":"MONDO:0017629","xrefs":{"Monarch":{"xref_id":"0017629"}}}


id: GO:0004723
data:
  {"annotated_genes":["SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of calcium ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0004721","GO:0003674","GO:0016788","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0008596","Reactome:R-HSA-2025882"],"synonyms":[{"name":"calcineurin","type":"narrow"},{"name":"calcium-dependent protein serine/threonine phosphatase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0004723","terms_by_termid":{"GO:0033192":null}}


id: GO:1900939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"negatively_regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"down regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"inhibition of (Z)-nonadeca-1,14-diene metabolic process","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900939"}


id: GO:0018631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phenylacetate + O2 + reduced [NADPH--hemoprotein reductase] = (2-hydroxyphenyl)acetate + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:53392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenylacetate 2-hydroxylase activity","secondary_identifiers":["EC:1.14.14.54","UM-BBD_reactionID:r0036"],"synonyms":[{"name":"phenylacetate hydroxylase activity","type":"exact"}],"termid":"GO:0018631"}


id: GO:2000025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leaf formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"},{"relation_name":"regulates","term_name":"leaf formation","termid":"GO:0010338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leaf formation","termid":"GO:2000025"}


id: PBO:0078585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 59","termid":"PBO:0078585"}


id: PBO:0109834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase, e2 component of oxoglutarate dehydrogenase complex Kgd2","termid":"PBO:0109834"}


id: GO:2000163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in outflow tract morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in outflow tract morphogenesis (obsolete GO:2000163)","termid":"GO:2000163"}


id: PBO:0071865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 3","termid":"PBO:0071865"}


id: FYPO:0005848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which H3-K9 specific histone methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","termid":"FYPO:0005846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000002","FYPO:0000652","FYPO:0000707","FYPO:0000641","FYPO:0005447","FYPO:0000654"],"is_obsolete":false,"name":"abolished histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"abolished H3-K9 specific histone methyltransferase activity","type":"exact"},{"name":"histone methyltransferase activity (H3-K9 specific) activity abolished","type":"exact"}],"termid":"FYPO:0005848"}


id: FYPO:0001248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation","synonyms":[{"name":"abnormal regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0001248"}


id: PBO:0076530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 43","termid":"PBO:0076530"}


id: MONDO:0004983
data:
  {"annotated_genes":["SJAG_01837","SJAG_03698","SJAG_00786","SJAG_04324","SJAG_01465","SJAG_02690","SJAG_03286","SJAG_02339","SJAG_02294","SJAG_03418","SJAG_02500","SJAG_01941","SJAG_02463","SJAG_02223","SJAG_04663","SJAG_02035","SJAG_03635","SJAG_02006","SJAG_05196","SJAG_00663","SJAG_03051","SJAG_04176","SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013901"},{"annotations":[86939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014961"},{"annotations":[85141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054725"},{"annotations":[84970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054726"},{"annotations":[86162,86161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054732"},{"annotations":[86563,86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011720"},{"annotations":[84921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"},{"annotations":[85832,85831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030507"},{"annotations":[85849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030515"},{"annotations":[86841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030733"},{"annotations":[86704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030787"},{"annotations":[85723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024773"},{"annotations":[85739,85738,85741,85742,85743,85740,85744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[85469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030869"}]},"cv_name":"mondo","definition":"A male infertility characterized by dirsuption of the process of sperm development from diploid cells into mature haploid spermatozoa.","definition_xrefs":["DOID:0111910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00663":null,"SJAG_00786":null,"SJAG_01465":null,"SJAG_01837":null,"SJAG_01941":null,"SJAG_02006":null,"SJAG_02035":null,"SJAG_02223":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02463":null,"SJAG_02500":null,"SJAG_02690":null,"SJAG_03051":null,"SJAG_03286":null,"SJAG_03418":null,"SJAG_03635":null,"SJAG_03698":null,"SJAG_04176":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553794","EFO:0000279","OMIMPS:258150","MEDGEN:766708"],"synonyms":[{"name":"spermatogenic failure","type":"exact"}],"termid":"MONDO:0004983","terms_by_termid":{"MONDO:0009461":null,"MONDO:0010767":null,"MONDO:0011720":null,"MONDO:0013901":null,"MONDO:0014961":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null},"xrefs":{"Monarch":{"xref_id":"0004983"}}}


id: PBO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II (predicted)","termid":"PBO:0001210"}


id: GO:0050629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trichloroethene + chloride + acceptor = tetrachloroethene + reduced acceptor. The reaction occurs in the reverse direction.","definition_xrefs":["RHEA:20353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tetrachloroethene reductive dehalogenase activity","secondary_identifiers":["EC:1.21.99.5","MetaCyc:1.97.1.8-RXN"],"synonyms":[{"name":"acceptor:trichloroethene oxidoreductase (chlorinating)","type":"related"},{"name":"tetrachloroethene reductase activity","type":"related"}],"termid":"GO:0050629"}


id: PBO:0040016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 5","termid":"PBO:0040016"}


id: PBO:0068569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 20, pseudogene","termid":"PBO:0068569"}


id: PBO:0082359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in endoplasmic reticulum degradation; involved specifically in autophagy of cortical and cytoplasmic ER in response to nitrogen starvation or rapamycin treatment; acts with COPII subunit Sfb3p; localizes to the cortical and cytoplasmic ER; similar to human FAM134B, which is also involved in ER autophagy and is associated with sensory neuropathy","termid":"PBO:0082359"}


id: PBO:0076926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFDP1 pseudogene 2","termid":"PBO:0076926"}


id: FYPO:0007100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is arrested in prophase I under conditions where arrest does not normally occur, and with telomeres clustered at the spindle pole body. Telomere clustering at the SPB indicates that the cell has reached or passed the pachytene stage.","definition_xrefs":["PMID:21449049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic prophase I with clustered telomeres","synonyms":[{"name":"abnormal cell cycle arrest in meiotic prophase I at or after pachytene","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at SPB","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at spindle pole bodies","type":"exact"}],"termid":"FYPO:0007100"}


id: GO:0010609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression after the production of a mRNA transcript by its transport into, or maintenance in, a specific location within the cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization","termid":"GO:0008298"},{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051179"],"is_obsolete":false,"name":"mRNA localization resulting in post-transcriptional regulation of gene expression","synonyms":[{"name":"mRNA localisation resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"mRNA localization resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localisation","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localization","type":"exact"}],"termid":"GO:0010609"}


id: MONDO:0007015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the membranes surrounding the brain and spinal cord due to a viral infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"},{"relation_name":"is_a","term_name":"aseptic meningitis","termid":"MONDO:0006662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral meningitis","secondary_identifiers":["ICD9:321.2","MESH:D008587","NCIT:C118298","EFO:1001236","ICD9:047.9","MedDRA:10047469","UMLS:C0025297","ICD10CM:A87","ICD9:047.8","DOID:10310","SCTID:58170007","MEDGEN:44355"],"termid":"MONDO:0007015","xrefs":{"Monarch":{"xref_id":"0007015"}}}


id: PBO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense transcript detected","termid":"PBO:0000359"}


id: MONDO:0020169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with ptosis (obsolete MONDO:0020169)","secondary_identifiers":["Orphanet:98578"],"termid":"MONDO:0020169","xrefs":{"Monarch":{"xref_id":"0020169"}}}


id: GO:0002588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002586"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"}],"termid":"GO:0002588"}


id: MONDO:0013071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the SYNE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 4, autosomal dominant","secondary_identifiers":["UMLS:C2751807","GARD:18206","DOID:0070249","MEDGEN:414476","MESH:C567831","OMIM:612998"],"synonyms":[{"name":"EDMD4","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 4, autosomal dominant","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 4 with variable features","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 4, autosomal dominant","type":"exact"},{"name":"SYNE1 autosomal dominant Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal dominant Emery-Dreifuss muscular dystrophy caused by mutation in SYNE1","type":"exact"}],"termid":"MONDO:0013071","xrefs":{"Monarch":{"xref_id":"0013071"}}}


id: FYECO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 2-deoxyglucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 2-DG","synonyms":[{"name":"2-deoxy-D-glucose added","type":"exact"},{"name":"2-deoxyglucose added","type":"exact"}],"termid":"FYECO:0000332"}


id: PBO:0070519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 18","termid":"PBO:0070519"}


id: MONDO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solitary necrotic tumor of the liver is a rare nonmalignant hepatic lesion characterized by a mass with a completely necrotic core often partially calcified, surrounded by a dense hyalinized fibrous capsule containing elastin fibers. Patients are usually asymptomatic but some may suffer from intermittent abdominal pain or discomfort.","definition_xrefs":["Orphanet:100035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"solitary necrotic nodule of the liver","secondary_identifiers":["GARD:19743","icd11.foundation:209168589","MEDGEN:755361","UMLS:C2960192","SCTID:447058001"],"synonyms":[{"name":"hepatic solitary necrotic nodule","type":"exact"}],"termid":"MONDO:0015049","xrefs":{"Monarch":{"xref_id":"0015049"}}}


id: FYPO:0007084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to sulfur starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:28388826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to sulfur starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to sulfur starvation","type":"related"},{"name":"decreased RNA level during cellular response to sulfur depletion","type":"exact"},{"name":"decreased RNA level during cellular response to sulfur deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to sulfur starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to sulfur starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to sulphur starvation","type":"exact"},{"name":"decreased RNA level during sulfur starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to sulfur starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to sulfur starvation","type":"exact"},{"name":"reduced RNA level during cellular response to sulfur starvation","type":"exact"}],"termid":"FYPO:0007084"}


id: MONDO:0017842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Senior-Loken syndrome (SLSN) is a very rare autosomal recessive oculo-renal disease characterized by the association of nephronophthisis (NPHP), a chronic kidney disease, with retinal dystrophy.","definition_xrefs":["Orphanet:3156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"Senior-Loken syndrome","secondary_identifiers":["MEDGEN:96045","MESH:C537580","icd11.foundation:1975732692","UMLS:C0403553","NCIT:C168588","DOID:0050576","GARD:322","NANDO:1201049","OMIMPS:266900"],"synonyms":[{"name":"Loken Senior syndrome","type":"exact"},{"name":"SLSN","type":"exact"},{"name":"Senior Loken syndrome","type":"related"},{"name":"nephronophthisis with retinal dystrophy","type":"exact"},{"name":"renal dysplasia retinal aplasia","type":"related"},{"name":"renal dysplasia-retinal aplasia syndrome","type":"exact"},{"name":"renal-retinal syndrome","type":"exact"}],"termid":"MONDO:0017842","xrefs":{"Monarch":{"xref_id":"0017842"}}}


id: PBO:0038534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 10, depalmitoylase","termid":"PBO:0038534"}


id: MONDO:1010948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hodgkin lymphoma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine lymphoma","termid":"MONDO:0700145"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-hodgkin lymphoma, dog","secondary_identifiers":["OMIA:001708-9615"],"termid":"MONDO:1010948","xrefs":{"Monarch":{"xref_id":"1010948"}}}


id: PBO:0044554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual adaptor of phosphotyrosine and 3-phosphoinositides 1","termid":"PBO:0044554"}


id: GO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 4.5S ribosomal RNA (rRNA) molecule into a mature 4.5S rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"maturation of 4.5S rRNA","termid":"GO:0000476"}


id: PBO:0014620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name deriviation, Calmodulin-dependent Kinase Kinase","termid":"PBO:0014620"}


id: GO:1903715
data:
  {"annotated_genes":["SJAG_01062","SJAG_02592","SJAG_00698","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94134,97400,109492,111678],"is_not":false,"summary":null,"term":"GO:1903715"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aerobic respiration.","definition_xrefs":["PMID:19266076","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"regulates","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00698":null,"SJAG_01062":null,"SJAG_02433":null,"SJAG_02592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of aerobic respiration","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903715","terms_by_termid":{"GO:1903715":null}}


id: GO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium initiation (obsolete GO:0075028)","synonyms":[{"name":"negative regulation of appressorium initiation on or near host","type":"related"},{"name":"negative regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075028"}


id: PBO:0069025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 270, pseudogene","termid":"PBO:0069025"}


id: PBO:0081576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 503","termid":"PBO:0081576"}


id: MONDO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the Bartholin gland and is characterized by the presence of malignant glandular epithelial cells and malignant squamous epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartholin gland squamous cell carcinoma","termid":"MONDO:0004053"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Bartholin gland adenosquamous carcinoma","secondary_identifiers":["UMLS:C1511050","NCIT:C40296","DOID:5630","MEDGEN:267339"],"synonyms":[{"name":"Bartholin gland adenosquamous carcinoma","type":"exact"},{"name":"Bartholin's gland adenosquamous carcinoma","type":"exact"},{"name":"major vestibular gland adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0003555","xrefs":{"Monarch":{"xref_id":"0003555"}}}


id: FYPO:0004122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to thiabendazole. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to thiabendazole (obsolete FYPO:0004122)","synonyms":[{"name":"cut during cellular response to TBZ","type":"exact"},{"name":"cut during cellular response to thiabendazole during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to thiabendazole during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to thiabendazole","type":"exact"}],"termid":"FYPO:0004122"}


id: PBO:0005086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF1/Su(H)/LAG-1 family transcription factor Cbf11","termid":"PBO:0005086"}


id: MONDO:0009242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brittle cornea syndrome is a form of Ehlers-Danlos syndrome characterized by a severe ocular manifestations due to extreme corneal thinning and fragility with rupture in the absence of significant trauma, and progression to blindness. Extraocular manifestations comprise deafness, developmental hip dysplasia, and joint hypermobility.","definition_xrefs":["Orphanet:90354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"brittle cornea syndrome","secondary_identifiers":["OMIMPS:229200","SCTID:719096006","MESH:C536198","GARD:1019","DOID:14775"],"synonyms":[{"name":"BCS1","type":"related"},{"name":"EDS VIB (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 6B (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 6b","type":"related"},{"name":"brittle cornea syndrome","type":"exact"},{"name":"brittle cornea syndrome 1","type":"related"},{"name":"brittle cornea syndrome 2","type":"narrow"},{"name":"brittle cornea syndrome type 1","type":"exact"},{"name":"kyphoscoliosis type","type":"exact"},{"name":"type VIB Ehlers-Danlos syndrome","type":"exact"}],"termid":"MONDO:0009242","xrefs":{"Monarch":{"xref_id":"0009242"}}}


id: PBO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthine phosphoribosyltransferase (predicted)","termid":"PBO:0001377"}


id: MONDO:1011189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal stenosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal stenosis, non-human animal","termid":"MONDO:1010303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal stenosis, dog","secondary_identifiers":["OMIA:000947-9615"],"termid":"MONDO:1011189","xrefs":{"Monarch":{"xref_id":"1011189"}}}


id: MONDO:1010140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia areata that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin appendage disorder, non-human animal","termid":"MONDO:1011358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata, non-human animal","secondary_identifiers":["OMIA:001702"],"termid":"MONDO:1010140","xrefs":{"Monarch":{"xref_id":"1010140"}}}


id: PBO:0040651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBSome interacting protein 1","termid":"PBO:0040651"}


id: MONDO:0024883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor that has spread from its original (primary) site of growth to another site, close to or distant from the primary site. Metastasis is characteristic of advanced malignancies, but in rare instances can be seen in neoplasms lacking malignant morphology.","definition_xrefs":["NCIT:C3261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastatic neoplasm","secondary_identifiers":["UMLS:C2939420","ICDO:8000/6","EFO:0009709","MEDGEN:422476"],"synonyms":[{"name":"metastatic disease","type":"exact"},{"name":"metastatic neoplasm","type":"exact"},{"name":"metastatic tumor","type":"exact"},{"name":"metastatic tumour","type":"exact"}],"termid":"MONDO:0024883","xrefs":{"Monarch":{"xref_id":"0024883"}}}


id: PBO:0084319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin; involved in nuclear import and export of proteins, including import of replication protein A and export of Far1p and transcription factors Swi5p, Swi6p, Msn2p, and Pho4p; required for re-export of mature tRNAs after their retrograde import from the cytoplasm; exportin-5 homolog","termid":"PBO:0084319"}


id: GO:1900195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oocyte maturation.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oocyte maturation","termid":"GO:1900193"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"oocyte maturation","termid":"GO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oocyte maturation","synonyms":[{"name":"activation of oocyte maturation","type":"narrow"},{"name":"up regulation of oocyte maturation","type":"exact"},{"name":"up-regulation of oocyte maturation","type":"exact"},{"name":"upregulation of oocyte maturation","type":"exact"}],"termid":"GO:1900195"}


id: PBO:0039756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APP divergent transcript","termid":"PBO:0039756"}


id: PBO:0055093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2511","termid":"PBO:0055093"}


id: GO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process that results in a cell becoming capable of differentiating autonomously into an ectoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"ectodermal cell fate commitment","termid":"GO:0001712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal cell fate determination","synonyms":[{"name":"ectoderm cell fate determination","type":"exact"}],"termid":"GO:0001713"}


id: PBO:0064070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 104","termid":"PBO:0064070"}


id: MONDO:0019373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Desmoplastic small round cell tumor (DSRCT) is an aggressive soft tissue cancer that typically arises in serous lined surfaces of the abdominal or pelvic peritoneum, and spreads to the omentum, lymph nodes and hematogenously disseminates especially to the liver. Extraserous primary location has been reported in exceptional cases.","definition_xrefs":["Orphanet:83469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"desmoplastic small round cell tumor","secondary_identifiers":["GARD:6265","NCIT:C8300","UMLS:C0281508","NANDO:2200059","DOID:6785","MedDRA:10064581","MedDRA:10064587","HGNC:12796","MEDGEN:83833","ONCOTREE:DSRCT","ICDO:8806/3","MESH:D058405","EFO:1000895"],"synonyms":[{"name":"DSRCT","type":"exact"},{"name":"Desmoplas. small round cell tumor","type":"exact"},{"name":"Desmoplas. small round cell tumour","type":"exact"},{"name":"Desmoplastic small round cell tumor","type":"exact"},{"name":"Desmoplastic small round cell tumour","type":"exact"},{"name":"Desmoplastic small round-cell neoplasm","type":"exact"},{"name":"Desmoplastic small round-cell tumor","type":"exact"},{"name":"Desmoplastic small round-cell tumour","type":"exact"},{"name":"Polyphenotypic small round cell tumor","type":"exact"},{"name":"Polyphenotypic small round cell tumour","type":"exact"},{"name":"desmoplastic small round cell tumor","type":"exact"},{"name":"desmoplastic small-round-cell tumor","type":"related"},{"name":"desmoplastic small-round-cell tumour","type":"related"}],"termid":"MONDO:0019373","xrefs":{"Monarch":{"xref_id":"0019373"}}}


id: MONDO:0003470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma which shows conspicuous cellularity without a significant increase in mitotic rate. (Adapted from WHO)","definition_xrefs":["NCIT:C4713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular ependymoma","secondary_identifiers":["UMLS:C1384403","NCIT:C4714","DOID:5500","MEDGEN:235137"],"termid":"MONDO:0003470","xrefs":{"Monarch":{"xref_id":"0003470"}}}


id: PBO:0038509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 4","termid":"PBO:0038509"}


id: PBO:0089349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1","termid":"PBO:0089349"}


id: FYPO:0004204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snRNA or precursor level","termid":"FYPO:0005997"},{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased mature snRNA level","synonyms":[{"name":"decreased mature small nuclear RNA level","type":"exact"},{"name":"decreased mature snRNA accumulation","type":"related"},{"name":"decreased mature snRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature snRNA level during vegetative growth","type":"exact"},{"name":"decreased mature snRNA transcript level","type":"broad"},{"name":"decreased snRNA level","type":"broad"},{"name":"reduced mature snRNA level","type":"exact"}],"termid":"FYPO:0004204"}


id: MONDO:0021211
data:
  {"annotated_genes":["SJAG_03429","SJAG_00579"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"brain neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0006118","EFO:0003833","NCIT:C2907","MEDGEN:14216"],"synonyms":[{"name":"brain neoplasm (disease)","type":"exact"},{"name":"brain neoplasms","type":"exact"},{"name":"brain tumor","type":"exact"},{"name":"brain tumour","type":"exact"},{"name":"neoplasm of brain","type":"exact"},{"name":"neoplasm of the brain","type":"exact"},{"name":"tumor of brain","type":"exact"},{"name":"tumor of the Brain","type":"exact"},{"name":"tumour of brain","type":"exact"},{"name":"tumour of the Brain","type":"exact"}],"termid":"MONDO:0021211","terms_by_termid":{"MONDO:0007959":null,"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0021211"}}}


id: GO:1904857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis to vascular endothelial growth factor.","definition_xrefs":["PMID:21885851","GOC:BHF","GOC:rph","GO_REF:0000058","GOC:TermGenie","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902547"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:1904857"}


id: GO:1904448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aspartate secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:2342602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of aspartate secretion","termid":"GO:1904448"}


id: GO:0038089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to its receptor on the surface of a cell, which activates or increases the frequency, rate or extent of the orderly movement of a cell from one site to another.","definition_xrefs":["GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cell migration by vascular endothelial growth factor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell migration","type":"narrow"},{"name":"VEGF-induced cell migration","type":"exact"},{"name":"positive regulation of cell migration by VEGF signaling pathway","type":"exact"},{"name":"positive regulation of cell migration by vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:0038089"}


id: GO:0090452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lithium ions (Li+) across a membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lithium ion transport","termid":"GO:0010351"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lithium ion transmembrane transport","synonyms":[{"name":"lithium ion import","type":"narrow"},{"name":"lithium ion uptake","type":"exact"}],"termid":"GO:0090452"}


id: MONDO:0010556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of chondrodysplasia punctata.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"non-rhizomelic chondrodysplasia punctata","termid":"MONDO:0015775"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata","secondary_identifiers":["DOID:0060292","MEDGEN:538019","UMLS:C0263627"],"synonyms":[{"name":"CPXD","type":"exact"},{"name":"X-linked dominant chondrodysplasia punctata","type":"related"},{"name":"chondrodysplasia punctata, X-linked","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant","type":"related"},{"name":"chondrodystrophia calcificans congenita","type":"exact"}],"termid":"MONDO:0010556","xrefs":{"Monarch":{"xref_id":"0010556"}}}


id: PBO:0060215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major vault protein","termid":"PBO:0060215"}


id: MONDO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A generalized isolated dystonia characterized by early-onset, which may be clinically indistinguishable from DYT-TOR1A and may be the most common cause of early-onset generalized dystonia, at least outside the Askenazi Jewish population.","definition_xrefs":["PMID:27992417","PMID:27839873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized dystonia","termid":"MONDO:0000476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"early-onset generalized dystonia","synonyms":[{"name":"DYT-KMT2B","type":"exact"},{"name":"early-onset generalised isolated dystonia","type":"related"},{"name":"early-onset generalized isolated dystonia","type":"related"},{"name":"early-onset, generalised dystonia with mild syndromic features","type":"exact"},{"name":"early-onset, generalized dystonia with mild syndromic features","type":"exact"}],"termid":"MONDO:0100016","xrefs":{"Monarch":{"xref_id":"0100016"}}}


id: PBO:0040579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAALC antisense RNA 1","termid":"PBO:0040579"}


id: PBO:0089130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor alpha subunit Srp101","termid":"PBO:0089130"}


id: PBO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt5","termid":"PBO:0001715"}


id: GO:1901417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to ethanol","termid":"GO:1901416"},{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"negatively_regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to ethanol","synonyms":[{"name":"down regulation of response to ethanol","type":"exact"},{"name":"down-regulation of response to ethanol","type":"exact"},{"name":"downregulation of response to ethanol","type":"exact"},{"name":"inhibition of response to ethanol","type":"narrow"}],"termid":"GO:1901417"}


id: PBO:0113283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of major facilitator superfamily; member of 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to plasma membrane; targeted to vacuole via AP-3 pathway; TPO3 has a paralog, TPO2, that arose from the whole genome duplication","termid":"PBO:0113283"}


id: PBO:0064849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R14B antisense RNA 1","termid":"PBO:0064849"}


id: PBO:0034695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_unknown","termid":"PBO:0034695"}


id: PBO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-box protein 1","termid":"PBO:0001042"}


id: GO:0140951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl27-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me3.","definition_xrefs":["RHEA:60292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008276","GO:0140096","GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"histone H3K27 trimethyltransferase activity","synonyms":[{"name":"histone H3-K27 trimethylase activity","type":"exact"},{"name":"histone H3-K27 trimethylation","type":"broad"},{"name":"histone H3K27 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K27 trimethylase activity","type":"exact"},{"name":"histone H3K27 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140951"}


id: MONDO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the mucosal epithelial surface of the frontal sinus. Patients may present with nasal fullness, obstruction, and/or epistaxis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal sinus cancer","termid":"MONDO:0001756"},{"relation_name":"is_a","term_name":"paranasal sinus squamous cell carcinoma","termid":"MONDO:0044705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"frontal sinus squamous cell carcinoma","secondary_identifiers":["NCIT:C6067","MEDGEN:272639","DOID:2441","SCTID:707356001","UMLS:C1333646"],"synonyms":[{"name":"epidermoid carcinoma of frontal sinus","type":"exact"},{"name":"epidermoid carcinoma of the frontal sinus","type":"exact"},{"name":"frontal sinus epidermoid carcinoma","type":"exact"},{"name":"frontal sinus squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of frontal sinus","type":"exact"},{"name":"squamous cell carcinoma of the frontal sinus","type":"exact"}],"termid":"MONDO:0002301","xrefs":{"Monarch":{"xref_id":"0002301"}}}


id: GO:0097296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway (obsolete GO:0097296)","secondary_identifiers":["Reactome:R-HSA-140534"],"synonyms":[{"name":"activation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"activation of initiator caspase activity","type":"narrow"}],"termid":"GO:0097296"}


id: GO:0008167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sigma virus replication (obsolete GO:0008167)","synonyms":[{"name":"sigma virus replication","type":"exact"}],"termid":"GO:0008167"}


id: MONDO:0010537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A X-linked yndrome characterized by intellectual deficit, truncal obesity, characteristic facial features, hypogonadism, tapered fingers and short toes.","definition_xrefs":["Orphanet:127"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyelids malposition disorder (obsolete MONDO:0020158)","termid":"MONDO:0020158"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Borjeson-Forssman-Lehmann syndrome","secondary_identifiers":["UMLS:C0265339","GARD:936","NORD:866","OMIM:301900","DOID:0050681","ICD9:759.89","MESH:C536575","MEDGEN:78557","SCTID:21634003"],"synonyms":[{"name":"BFLS","type":"exact"},{"name":"BORJ","type":"exact"},{"name":"Borjeson syndrome","type":"exact"},{"name":"Borjeson-FORSSMAN-Lehmann syndrome","type":"related"},{"name":"Borjeson-Forssman-Lehmann syndrome","type":"exact"},{"name":"Borjeson-Forssman-Lehmann syndrome, X-linked recessive","type":"exact"},{"name":"Börjeson-Forssman-Lehman Syndrome","type":"exact"},{"name":"MRXSBFL","type":"exact"},{"name":"intellectual deficiency-epilepsy-endocrine disorders syndrome","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Borjeson-Forssman-Lehmann type","type":"related"},{"name":"intellectual disability, epilepsy, and endocrine disorder","type":"exact"},{"name":"intellectual disability, epilepsy, and endocrine disorders","type":"related"},{"name":"intellectual disability-epilepsy-endocrine disorders syndrome","type":"exact"},{"name":"mental deficiency, epilepsy and endocrine disorders","type":"related"},{"name":"mental retardation, X-linked, syndromic, Borjeson-Forssman-Lehmann type","type":"related"},{"name":"mental retardation, epilepsy, and endocrine disorder","type":"exact"},{"name":"mental retardation, epilepsy, and endocrine disorders","type":"related"},{"name":"syndromic X-linked intellectual disability Borjeson-Forssman-Lehmann type","type":"exact"},{"name":"syndromic X-linked mental retardation Borjeson-Forssman-Lehmann type","type":"exact"}],"termid":"MONDO:0010537","xrefs":{"Monarch":{"xref_id":"0010537"}}}


id: GO:0051282
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"sequestering of calcium ion","termid":"GO:0051208"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium ion (Ca2+) retention","type":"exact"},{"name":"regulation of calcium ion (Ca2+) sequestering","type":"exact"},{"name":"regulation of calcium ion (Ca2+) sequestration","type":"exact"},{"name":"regulation of calcium ion (Ca2+) storage","type":"exact"},{"name":"regulation of retention of calcium ion (Ca2+)","type":"exact"},{"name":"regulation of sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"regulation of sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"regulation of storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051282","terms_by_termid":{"GO:0061454":null}}


id: PBO:0110811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type, meiosis-specific copper activator, Mca1","termid":"PBO:0110811"}


id: MONDO:0020588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung tumor that arises from perivascular epithelioid cells (PECs).","definition_xrefs":["NCIT:C142783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung PEComa","secondary_identifiers":["UMLS:C4684821","MEDGEN:1639012"],"synonyms":[{"name":"lung PEComa","type":"exact"},{"name":"lung pecomatous tumor","type":"exact"},{"name":"lung pecomatous tumour","type":"exact"}],"termid":"MONDO:0020588","xrefs":{"Monarch":{"xref_id":"0020588"}}}


id: PBO:0072294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 12","termid":"PBO:0072294"}


id: MONDO:0006185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A morphologic finding indicating the presence of typical or atypical proliferation of biliary epithelial cells in the portal tracts of the liver.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete ductal or ductular proliferation (obsolete MONDO:0006185)","termid":"MONDO:0006185","xrefs":{"Monarch":{"xref_id":"0006185"}}}


id: PBO:0072454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 18","termid":"PBO:0072454"}


id: GO:0009023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-cysteine + activated-tRNA = L-serine + tRNA containing a thionucleotide.","definition_xrefs":["EC:2.8.1.4","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA sulfurtransferase (obsolete GO:0009023)","synonyms":[{"name":"tRNA sulfurtransferase","type":"exact"},{"name":"tRNA sulphurtransferase activity","type":"exact"}],"termid":"GO:0009023"}


id: MONDO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inborn glycogen metabolism disorder (obsolete MONDO:0000422)","termid":"MONDO:0000422","xrefs":{"Monarch":{"xref_id":"0000422"}}}


id: MONDO:1011447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, non-human animal","secondary_identifiers":["OMIA:001059"],"termid":"MONDO:1011447","xrefs":{"Monarch":{"xref_id":"1011447"}}}


id: PATO:0002535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a short and stout cylindrical shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peg-like","termid":"PATO:0002535"}


id: GO:0097120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a receptor is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:21525273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"receptor localization to synapse","synonyms":[{"name":"receptor localisation to synapse","type":"exact"}],"termid":"GO:0097120"}


id: SO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has arisen after splitting of the embryo, resulting in the variant being found in only some of the tissues or cells of the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatic_variant","synonyms":[{"name":"somatic variant","type":"exact"}],"termid":"SO:0001777"}


id: PR:Q9P7B2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7B2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.05","synonyms":[{"name":"Spom972h-rps802","type":"exact"}],"termid":"PR:Q9P7B2"}


id: PBO:0018053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin family U3 and U14 snoRNA associated protein Enp1 (predicted)","termid":"PBO:0018053"}


id: PBO:0078989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon TTA) 2-1","termid":"PBO:0078989"}


id: PBO:0002549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4G","termid":"PBO:0002549"}


id: GO:0030751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + licodione = 2'-O-methyllicodione + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:18521","EC:2.1.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"licodione 2'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:LICODIONE-2-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R03623"],"synonyms":[{"name":"S-adenosyl-L-methionine:licodione 2'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030751"}


id: PBO:0088549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human HID1 ortholog 1, possible Golgi protein (by similarity)","termid":"PBO:0088549"}


id: PBO:0045230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC17 pseudogene 1","termid":"PBO:0045230"}


id: PBO:0027548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_non-fermentable_carbon_source","termid":"PBO:0027548"}


id: GO:0034059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating a decline in oxygen levels to trace amounts, <0.1%.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anoxia","synonyms":[{"name":"response to anoxic stress","type":"exact"}],"termid":"GO:0034059"}


id: GO:1904324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["GOC:TermGenie","PMID:15937517","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"negatively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"down regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"down-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"downregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"inhibition of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"negative regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904324"}


id: PBO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin transmembrane transporter Pmd1","termid":"PBO:0018184"}


id: PBO:0053382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 309","termid":"PBO:0053382"}


id: PBO:0052128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily F member 1","termid":"PBO:0052128"}


id: PBO:0061880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 3","termid":"PBO:0061880"}


id: MONDO:0024475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"intraepithelial neoplasia","termid":"MONDO:0024474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous cell intraepithelial neoplasia","secondary_identifiers":["UMLS:C0333873","NCIT:C8334","MEDGEN:83092"],"synonyms":[{"name":"SIN","type":"broad"},{"name":"sil","type":"broad"},{"name":"squamous cell intraepithelial neoplasia","type":"exact"},{"name":"squamous intraepithelial lesion","type":"exact"}],"termid":"MONDO:0024475","xrefs":{"Monarch":{"xref_id":"0024475"}}}


id: PBO:0053017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 5","termid":"PBO:0053017"}


id: PBO:0085947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; N-terminally propionylated in vivo; deletion mutant is viable","termid":"PBO:0085947"}


id: PBO:0032738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export GTPase Nog2 (predicted)","termid":"PBO:0032738"}


id: PBO:0091581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Yip11/Gem2","termid":"PBO:0091581"}


id: GO:0014878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus involved in regulation of muscle adaptation","termid":"GO:0014874"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to electrical stimulus involved in regulation of muscle adaptation","synonyms":[{"name":"response to electrical stimulus involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014878"}


id: MONDO:0023071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"enterovirus infectious disease","termid":"MONDO:0005747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterovirus antenatal infection","termid":"MONDO:0023071","xrefs":{"Monarch":{"xref_id":"0023071"}}}


id: PBO:0086119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ethanol metabolism; induced by heat shock and localized to the inner mitochondrial membrane; homologous to mammalian peroxisomal membrane protein Mpv17; human homolog MPV17 is implicated in hepatocerebral mtDNA depletion syndromes (MDDS), and complements yeast null mutant","termid":"PBO:0086119"}


id: PBO:0076136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLA2 pseudogene 1","termid":"PBO:0076136"}


id: GO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of a large and small subunit which catalyze the packaging of DNA into viral heads. Note that not all viral terminases have this structure, some exist as single polypeptides.","definition_xrefs":["GOC:bf","GOC:bm","GOC:mlg","GOC:jl","PMID:18687036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral terminase complex","synonyms":[{"name":"phage terminase complex","type":"narrow"},{"name":"virus terminase complex","type":"exact"}],"termid":"GO:0043493"}


id: PBO:0078944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 2-1","termid":"PBO:0078944"}


id: PBO:0005143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L4 (predicted)","termid":"PBO:0005143"}


id: PBO:0041444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 85","termid":"PBO:0041444"}


id: PBO:0108568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo-type fold protein, zf-MYND type zinc finger protein, Mub1-Rad6-Ubr2 ubiquitin ligase complex Mub1","termid":"PBO:0108568"}


id: SO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. GGTTTTTGT), part of a five_prime_D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_nonamer","synonyms":[{"name":"5'D-NONAMER","type":"exact"},{"name":"five prime D nonamer","type":"exact"}],"termid":"SO:0000497"}


id: PBO:0088749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc1","termid":"PBO:0088749"}


id: PBO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 1","termid":"PBO:0043801"}


id: MOD:01707
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with an isotope tagged reagent acyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}


id: PBO:0081784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF710 antisense RNA 1","termid":"PBO:0081784"}


id: MOD:00236
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(ADP-ribosyl)-L-asparagine.","definition_xrefs":["PubMed:15842200","RESID:AA0231","PubMed:2498316","Unimod:213#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4-(ADP-ribosyl)-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)-4-oxobutanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"MOD_RES ADP-ribosylasparagine","type":"exact"},{"name":"N4-(ADP-ribosyl)-L-asparagine","type":"exact"},{"name":"N4-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-asparagine","type":"exact"},{"name":"N4-alpha-D-ribofuranosyl-L-asparagine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:00236"}


id: GO:0039505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the normal processing and presentation of a peptide antigen on its cell surface in association with an MHC class II protein complex.","definition_xrefs":["GOC:add","GOC:bf","VZ:820","PMID:27832589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host antigen processing and presentation","termid":"GO:0039588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"inhibition of host MHC class II molecule presentation by virus","type":"narrow"},{"name":"suppression by virus of host antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"}],"termid":"GO:0039505"}


id: PR:O94421
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf22 gene.","definition_xrefs":["UniProtKB:O94421","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF chromatin-remodeling complex subunit snf22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.14c","synonyms":[{"name":"ATP-dependent helicase snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SWI/SNF complex subunit snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snf22","type":"exact"}],"termid":"PR:O94421"}


id: FYPO:0001474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the mitotic spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology","termid":"FYPO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body morphology","synonyms":[{"name":"abnormal mitotic SPB morphology","type":"exact"},{"name":"abnormal mitotic spindle pole body structure","type":"narrow"},{"name":"abnormal spindle pole body morphology during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0001474"}


id: PBO:0047839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD dependent oxidoreductase domain containing 2","termid":"PBO:0047839"}


id: MONDO:1011790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysphagia-associated muscular dystrophy, non-human animal","secondary_identifiers":["OMIA:000681"],"termid":"MONDO:1011790","xrefs":{"Monarch":{"xref_id":"1011790"}}}


id: GO:0006941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within striated muscle tissue, resulting in the shortening of the muscle. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope.","definition_xrefs":["ISBN:0198506732","GOC:jl","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle contraction","synonyms":[{"name":"sarcomeric muscle contraction","type":"exact"}],"termid":"GO:0006941"}


id: GO:1990663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + fumarate = orotate + succinate.","definition_xrefs":["PMID:1409592","RHEA:30059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (fumarate) activity","secondary_identifiers":["EC:1.3.98.1"],"termid":"GO:1990663"}


id: MONDO:0012748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAH11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 7","secondary_identifiers":["DOID:0110605","OMIM:611884","MEDGEN:394834","MESH:C567504","GARD:15533","UMLS:C2678473"],"synonyms":[{"name":"CILD7","type":"exact"},{"name":"DNAH11 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 7","type":"related"},{"name":"ciliary dyskinesia, primary, 7, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 7","type":"exact"},{"name":"primary ciliary dyskinesia 7","type":"exact"},{"name":"primary ciliary dyskinesia 7 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAH11","type":"exact"},{"name":"primary ciliary dyskinesia type 7","type":"exact"}],"termid":"MONDO:0012748","xrefs":{"Monarch":{"xref_id":"0012748"}}}


id: PBO:0028851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_UV","termid":"PBO:0028851"}


id: MONDO:0023297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Guttate psoriasis is a skin condition in which small, red, and scaly teardrop-shaped spots appear on the arms, legs, and middle of the body.It is a relatively uncommon form of psoriasis. The condition often develops very suddenly, and is usually triggered by an infection (e.g., strep throat, bacteria infection, upper respiratory infections or other viral infections). Other triggers include injury to the skin, including cuts, burns, and insect bites, certain malarial and heart medications, stress, sunburn, and excessive alcohol consumption. Treatment depends on the severity of the symptoms, ranging from at-home over the counter remedies to medicines that suppress the body's immunesystem to sunlight and phototherapy.","definition_xrefs":["GARD:0010569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"guttate psoriasis","secondary_identifiers":["MEDGEN:91004","ICD10CM:L40.4","SCTID:37042000","ICD9:696.1","UMLS:C0343052","icd11.foundation:1202062855"],"synonyms":[{"name":"guttate psoriasis","type":"exact"},{"name":"psoriasis guttata","type":"related"},{"name":"psoriasis guttate","type":"related"}],"termid":"MONDO:0023297","xrefs":{"Monarch":{"xref_id":"0023297"}}}


id: PBO:0058374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4746","termid":"PBO:0058374"}


id: PBO:0058068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4287","termid":"PBO:0058068"}


id: PBO:0065499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis susceptibility 1 candidate 1","termid":"PBO:0065499"}


id: GO:2001029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular glucuronidation (obsolete GO:2001029)","synonyms":[{"name":"regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001029"}


id: GO:0140011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H4 acetylated at lysine 12.","definition_xrefs":["PMID:14731392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 reader activity","termid":"GO:0140008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0140566","GO:0030674"],"is_obsolete":false,"name":"histone H4K12ac reader activity","synonyms":[{"name":"H4K12ac modified histone binding","type":"narrow"}],"termid":"GO:0140011"}


id: MONDO:0013430
data:
  {"annotated_genes":["SJAG_01267"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86653],"is_not":false,"summary":null,"term":"MONDO:0013430"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the ORC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01267":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3151113","MEDGEN:462463","GARD:15710","DOID:0080514","OMIM:613803"],"synonyms":[{"name":"MGORS3","type":"related"},{"name":"Meier-GORLIN syndrome 3","type":"related"},{"name":"Meier-Gorlin syndrome 3","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in ORC6","type":"exact"},{"name":"Meier-Gorlin syndrome type 3","type":"exact"},{"name":"ORC6 Meier-Gorlin syndrome","type":"exact"}],"termid":"MONDO:0013430","terms_by_termid":{"MONDO:0013430":null},"xrefs":{"Monarch":{"xref_id":"0013430"}}}


id: MONDO:0014404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Webb-Dattani syndrome","secondary_identifiers":["OMIM:615926","UMLS:C4014708","Orphanet:370006","MEDGEN:863145"],"synonyms":[{"name":"WEBB-Dattani syndrome","type":"related"},{"name":"WEDAS","type":"related"},{"name":"Webb-Dattani syndrome","type":"exact"},{"name":"hypothalamic insufficiency-secondary microcephaly-visual impairment-urinary anomalies syndrome","type":"exact"},{"name":"hypothalamo-pituitary-frontotemporal hypoplasia with visual and renal anomalies","type":"related"}],"termid":"MONDO:0014404","xrefs":{"Monarch":{"xref_id":"0014404"}}}


id: PBO:0081439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 292","termid":"PBO:0081439"}


id: PBO:0072997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 1","termid":"PBO:0072997"}


id: FYPO:0005953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is greater than in wild type during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint during cellular response to ionizing radiation","termid":"FYPO:0003490"},{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"delayed mitotic G2 DNA damage checkpoint deactivation during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"},{"name":"prolonged mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005953"}


id: MONDO:0006545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Erythema multiforme (EM) refers to a group ofhypersensitivity disorders characterized by symmetric red, patchy lesions, primarily on the arms and legs. The cause is unknown, but EM frequently occurs in association with herpes simplex virus, suggesting an immunologic process initiated by the virus. In half of the cases, the triggering agents appear to be medications, including anticonvulsants, sulfonamides, nonsteroidal anti-inflammatory drugs, and other antibiotics. In addition, some cases appear to be associated with infectious organisms such as Mycoplasma pneumoniae and many viral agents. Erythema multiforme is the mildest of three skin disorders that are often discussed in relation to each other. It is generally the mildest of the three. More severe is Stevens-Johnson syndrome. The most severe of the three is toxic epidermal necrolysis (TEN).","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythema multiforme","secondary_identifiers":["ICD9:695.1","DOID:0050185","ICD9:695.10","MEDGEN:4527","NCIT:C3024","icd11.foundation:364669853","MESH:D004892","UMLS:C0014742","EFO:1000694","SCTID:36715001","ICD10CM:L51"],"synonyms":[{"name":"Dermatostomatitis, erythema multiforme type","type":"related"},{"name":"EM","type":"related"},{"name":"Herpes iris, erythema multiforme type","type":"related"},{"name":"erythema multiforme bullosum","type":"related"},{"name":"erythema polymorphe, erythema multiforme type","type":"related"},{"name":"febrile mucocutaneous syndrome","type":"related"}],"termid":"MONDO:0006545","xrefs":{"Monarch":{"xref_id":"0006545"}}}


id: GO:0042389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the introduction of an omega-3 double bond into the fatty acid hydrocarbon chain.","definition_xrefs":["PMID:9037020","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"omega-3 fatty acid desaturase activity","termid":"GO:0042389"}


id: MONDO:0007978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant mesothelioma (obsolete MONDO:0007978)","termid":"MONDO:0007978","xrefs":{"Monarch":{"xref_id":"0007978"}}}


id: _global:functionally_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_related_to","secondary_identifiers":["RO:0002328"],"termid":"_global:functionally_related_to"}


id: PR:000050475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047.","definition_xrefs":["PRO:DAN","PMID:12181336","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/Phos(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: protein kinase wis1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-wis1/Phos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047","type":"narrow"},{"name":"wis1/Phos(S469,T473)","type":"exact"}],"termid":"PR:000050475"}


id: PBO:0077982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 4-1","termid":"PBO:0077982"}


id: GO:1903815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of collecting lymphatic vessel constriction","termid":"GO:1903814"},{"relation_name":"negatively_regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"down regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"down regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"down-regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"down-regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"downregulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"downregulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"inhibition of collecting lymphatic vessel constriction","type":"narrow"},{"name":"inhibition of lymphatic vessel myogenic constriction","type":"narrow"},{"name":"negative regulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903815"}


